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NLM Intramural Research Program |
| Research Group of Ivan Ovcharenko | |
| Research Projects | Publications | Collaborations | Resources | Group Members | Principal Investigator | Visiting us |
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Selected Publications |
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De novo human brain enhancers created by single-nucleotide mutations. Li S, Hannenhalli S, Ovcharenko I. Science Advances, 9(7) 2023 PDF Enhancer-silencer transitions in the human genome. Huang D, Ovcharenko I. Genome Research, 32(3):437-448 (2022) PDF Comprehensive In Vivo Interrogation Reveals Phenotypic Impact of Human Enhancer Variants. Kvon EZ, Zhu Y, ... Hudaiberdiev S, Ovcharenko I, ... Pennacchio LA. Cell, 180(6):1262-1271 (2020) PDF The first enhancer in an enhancer chain safeguards subsequent enhancer-promoter contacts from a distance. W. Song, R.Sharan and I. Ovcharenko Genome Biology, 20(1):197-207 (2019) PDF Stable enhancers are active in development, and fragile enhancers are associated with evolutionary adaptation. S. Li, E. Kvon, A. Visel, L. Pennacchio and I. Ovcharenko Genome Biology, 20(1):140-149 (2019) PDF Identification of human silencers by correlating cross-tissue epigenetic profiles and gene expression. D. Huang, H. Petrykowska, B. Miller, L. Elnitski and I. Ovcharenko Genome Research, 29(4):657-667 (2019) PDF Integrative analysis of the zinc finger transcription factor Lame duck in the Drosophila myogenic gene regulatory network Busser BW *, Huang D *, Rogacki KR *, ... Bulyk ML, Ovcharenko I #, Michelson AM # PNAS, 109(50):20768-73 (2013) (* - co-first, # - co-corresponding authors) PDF A High-Resolution Enhancer Atlas of the Developing Telencephalon Visel A, Taher L, ... Ovcharenko I, Pennacchio LA, Rubenstein JL (25 authors) Cell, (2013) PDF A machine learning approach for identifying novel cell type-specific transcriptional regulators of myogenesis B.W. Busser *, L. Taher *, Y. Kim, T. Tansey, M.J. Bloom, I. Ovcharenko #, A.M. Michelson # PLoS Genetics, 8(3):e1002531 (2012) PDF (* co-first, # co-corresponding authors) Genome-wide identification of conserved regulatory function in diverged sequences L. Taher, D.M. McGaughey, S. Maragh, I. Aneas, S.L. Bessling, W. Miller, M.A. Nobrega, A.S. McCallion, I. Ovcharenko Genome Research, 21(7), 1139-1149 (2011) PDF The Genome of the Western Clawed Frog Xenopus tropicalis U. Hellsten, et al. ... (48 authors) Science, 328:633-636 (2010) PDF Genome-wide discovery of human heart enhancers L. Narlikal, N.J. Sakabe, A.A. Blanski, F.E. Arimura, J.M. Westlund, M.A. Nobrega, I. Ovcharenko Genome Research, 2010 PDF Predicting tissue-specific enhancers in the human genome L.A. Pennacchio, G.G. Loots, M.A. Nobrega, and I. Ovcharenko Genome Research, 17(2), 201-11 (2007) PDF Evolution and functional classification of vertebrate gene deserts I. Ovcharenko, G.G. Loots, M.A. Nobrega, R.C. Hardison, W. Miller, and L. Stubbs Genome Research, 15, 137-145 (2005) PDF Scanning Human Gene Deserts for Long-Range Enhancers M. Nobrega*, I. Ovcharenko*, V. Afzal, E. Rubin Science 302(5644), 413 (2003) PDF Search for other articles from the group on PubMed |
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