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Report for CCDS90932.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
90932.1 Public Homo sapiens 1 TMEM269 24 110 108 CCDS HistoryNCBI Gene:100129924Re-query CCDS DB by CCDS ID:90932.1Re-query CCDS DB by GeneID:100129924See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 90932.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000637012.2 ENSP00000490213.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000637012.2Link to Ensembl Protein Viewer:ENSP00000490213.1Re-query CCDS DB by Nucleotide ID:ENST00000637012Re-query CCDS DB by Protein ID:ENSP00000490213
Original member Current member EBI ENST00000421630.6 ENSP00000490287.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000421630.6Link to Ensembl Protein Viewer:ENSP00000490287.1Re-query CCDS DB by Nucleotide ID:ENST00000421630Re-query CCDS DB by Protein ID:ENSP00000490287
Original member Current member EBI ENST00000536543.6 ENSP00000490716.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000536543.6Link to Ensembl Protein Viewer:ENSP00000490716.2Re-query CCDS DB by Nucleotide ID:ENST00000536543Re-query CCDS DB by Protein ID:ENSP00000490716
Original member Current member NCBI NM_001354602.2 NP_001341531.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001354602.2Link to Protein Sequence:NP_001341531.2Re-query CCDS DB by Nucleotide ID:NM_001354602Re-query CCDS DB by Protein ID:NP_001341531Link to BLAST:NP_001341531.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001341531.2 203 A0A1B0GVZ9 203 100% 0 0

Chromosomal Locations for CCDS 90932.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 42789894 42789934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 42792805 42792902 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 42793601 42793744 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 42794413 42794613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 42798098 42798225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (612 nt):
ATGGTGCTGGGGCTCTTCTCCATCATCTTCAGCTTCAGCAGGAAATGCCACTATGCCTCCCGGATGCTCC
TGGTCAGCTTCCTGTTAGACATGGCAGTCAGGGCAATGACCAGCCACATCAACATATGCTCCAAATTGGG
AGCCGAGCTGAATGACTTTGCCGTCTTCACCACCTTCGGCTTGGCCTCCGCTCTGCTCCTAGGCGTGGAT
GGACTTCTGAGTGGGATCCTGGCCATCATCTATGTGTCAGCTGCTTCTTTCCACTTGTGCTTTTATTCAC
CTGGAGTCCCCTCCACATACAAGGGTCTACCCTGCCCCTATGCTTCCTGCATCTTGGCTTCCACCTCCCT
TCTGACCAAAGGCAACAGGTTCATCCTCTGCTGCATGGCCTCACTCATGATTCTCTTCATGATGGACCAG
AGCTACTATCCATATGACAAAATCCTGGAGTCTGAGAACTGGAAAAAATTGGTTTATATAGGAGGTGTCA
TCATGCTGTTTTTCTCCCCATTGTCTCTGTCTGCTTTTTACTGCCTGATGTGGTCGCTCTCGTACATCTT
CTTTCCAGATGCTCTGTGGGGCAAGGCAGCCTGTCTTTCGCCACAGCACTGA

Translation (203 aa):
MVLGLFSIIFSFSRKCHYASRMLLVSFLLDMAVRAMTSHINICSKLGAELNDFAVFTTFGLASALLLGVD
GLLSGILAIIYVSAASFHLCFYSPGVPSTYKGLPCPYASCILASTSLLTKGNRFILCCMASLMILFMMDQ
SYYPYDKILESENWKKLVYIGGVIMLFFSPLSLSAFYCLMWSLSYIFFPDALWGKAACLSPQH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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