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Report for CCDS47617.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47617.1 Public Homo sapiens 7 POM121C 24 110 108 CCDS HistoryNCBI Gene:100101267Re-query CCDS DB by CCDS ID:47617.1Re-query CCDS DB by GeneID:100101267See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47617.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000615331.5 ENSP00000481575.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000615331.5Link to Ensembl Protein Viewer:ENSP00000481575.1Re-query CCDS DB by Nucleotide ID:ENST00000615331Re-query CCDS DB by Protein ID:ENSP00000481575
Original member Current member NCBI NM_001099415.3 NP_001092885.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001099415.3Link to Protein Sequence:NP_001092885.2Re-query CCDS DB by Nucleotide ID:NM_001099415Re-query CCDS DB by Protein ID:NP_001092885Link to BLAST:NP_001092885.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001092885.2 987 A8CG34-2 987 100% 0 0

Chromosomal Locations for CCDS 47617.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 75418796 75418893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 75419320 75419442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 75421509 75423203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 75424049 75424225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 75424526 75424628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 75425074 75425195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 75425635 75425708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 75426362 75426453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 75437515 75437686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 75439144 75439224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 75440954 75441115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 75441432 75441496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2964 nt):
ATGGTGTGTAGCCCAGTGACTGTGAGGATCGCCCCTCCTGACAGAAGATTTTCACGTTCTGCGATACCAG
AGCAGATAATCAGCTCAACACTGTCGTCACCATCAAGTAATGCCCCAGACCCATGTGCAAAGGAGACTGT
ACTGAGTGCCCTCAAAGAGAAGAAGAAGAAAAGGACAGTGGAGGAAGAAGACCAAATATTCCTTGATGGC
CAGGAAAATAAAAGAAGGCGCCATGATAGCAGTGGCAGTGGACATTCAGCATTTGAGCCCCTGGTGGCCA
GTGGAGTCCCCGCTTCTTTTGTGCCTAAGCCTGGGTCTCTGAAGAGAGGCCTCAATTCTCAGAGCTCAGA
TGACCACTTGAATAAGAGATCCCGAAGCTCTTCCATGAGCTCCTTGACAGGCGCTTACACAAGTGGCATC
CCTAGCTCCAGCCGCAATGCCATTACCAGTTCCTACAGCTCCACTCGAGGCATCTCACAGCTGTGGAAGA
GAAATGGCCCCAGTTCATCACCCTTCTCTAGCCCAGCCTCATCCCGCTCCCAGACACCGGAGAGGCCAGC
AAAGAAAATAAGAGAAGAAGAGCTGTGTCATCATTCCAGTTCTTCAACTCCATTGGCAGCAGACAAGGAG
TCCCAGGGAGAAAAGGCTGCAGATACAACCCCAAGGAAGAAACAAAACTCGAATTCTCAGTCTACACCTG
GCAGCTCTGGGCAGCGTAAGCGGAAAGTTCAGCTGCTGCCTTCTCGGCGAGGGGAACAGCTGACCTTGCC
TCCACCTCCCCAGCTTGGCTATTCGATCACTGCCGAGGACCTAGACTTAGAGAAGAAGGCTTCATTACAG
TGGTTCAACCAGGCCTTGGAGGACAAGAGTGATGCTGCCTCGAACTCTGTCACTGAGACCCCACCTACCA
CTCAGCCTTCATTTACCTTTACCCTGCCTGCTGCTGCAACTGCCTCCCCACCCACCTCCCTCCTGGCCCC
AAGCACCAACCCACTGTTAGAGAGCTTGAAGAAGATGCAGACTCCCCCGAGCCTGCCACCCTGCCCAGAA
TCTGCTGGAGCAGCAACCACTGAGGCCCTCTCACCTCCAAAGACACCCAGCCTCCTACCCCCGCTGGGTT
TATCACAGTCAGGGCCGCCAGGGCTGCTCCCCAGCCCCTCCTTTGACTCCAAACCCCCGACCACTTTGCT
GGGGCTGATCCCTGCTCCATCCATGGTACCAGCCACTGACACCAAGGCACCTCCAACCCTTCAGGCAGAG
ACGGCTACCAAACCCCAAGCCACATCTGCCCCGTCCCCCGCCCCCAAGCAAAGCTTCCTGTTTGGAACAC
AGAACACCTCACCTTCCAGCCCTGCCGCCCCTGCTGCATCTTCAGCATCTCCCATGTTCAAGCCCATTTT
CACGGCTCCACCCAAGAGTGAGAAGGAAGGCCTCACACCGCCTGGCCCTTCAGTCTCAGCCACAGCGCCC
TCCAGCTCCTCCCTCCCCACGACCACCAGCACCACAGCCCCGACCTTCCAGCCTGTCTTTAGCAGCATGG
GGCCACCTGCATCTGTGCCCTTGCCTGCTCCCTTCTTCAAGCAGACAACTACTCCCGCCACTGCTCCCAC
CACAACTGCCCCGCTCTTCACTGGCCTGGCCAGCGCCACCTCTGCTGTGGCTCCCATCACCTCTGCCAGT
CCATCCACAGACTCTGCTTCGAAGCCTGCGTTTGGCTTTGGCATAAACAGTGTGAGCAGCAGCAGTGTGA
GTACCACGACCAGCACCGCCACTGCCGCCTCACAGCCTTTCCTCTTCGGGGCGCCCCAGGCCTCTGCTGC
CAGCTTCACCCCGGCCATGGGCTCCATATTCCAGTTTGGCAAACCTCCTGCCTTGCCCACAACCACCACA
GTCACCACCTTCAGCCAGTCCCTGCCCACTGCCGTGCCAACGGCCACCAGCAGCAGCGCTGCCGACTTTA
GTGGTTTTGGCAGCACCCTCGCCACCTCCGCCCCGGCCACCAGCAGCCAGCCCACTCTGACGTTCAGTAA
CACGAGCACCCCCACGTTCAACATTCCCTTTGGCTCAAGCGCCAAGTCCCCGCTCCCATCATATCCGGGA
GCCAACCCCCAGCCCGCATTTGGGGCCGCTGAGGGGCAGCCACCGGGGGCCGCCAAGCCAGCCCTTACCC
CCAGCTTTGGCAGCTCTTTCACTTTTGGAAACTCTGCAGCCCCGGCCCCGGCTACTGCACCCACACCTGC
ACCTGCGTCCACGATCAAGATCGTGCCTGCGCACGTGCCTACGCCCATCCAGCCTACCTTTGGCGGTGCC
ACGCACTCGGCGTTTGGATTGAAAGCCACGGCTTCCGCCTTCGGCGCTCCCGCCAGCTCACAGCCCGCCT
TTGGCGGCTCCACTGCTGTCTTCTCCTTCGGTGCAGCCACCAGCTCCGGCTTTGGAGCCACCACCCAGAC
CGCCAGCAGCGGGAGCAGCAGCTCGGTGTTTGGCAGCACAACACCATCACCCTTCACGTTTGGGGGTTCG
GCAGCCCCCGCTGGCAGTGGGAGCTTTGGGATCAACGTGGCCACCCCAGGCTCCAGCGCCACCACCGGAG
CTTTCAGCTTTGGAGCAGGACAGAGTGGGAGCACAGCCACCTCCACCCCCTTCACAGGGGGCTTAGGTCA
GAACGCCCTGGGCACCACCGGCCAGAGCACACCGTTTGCCTTCAACGTGGGCAGCACAACTGAGAGCAAA
CCTGTGTTTGGAGGCACCGCCACCCCCACCTTTGGTCAGAACACCCCTGCGCCTGGAGTGGGCACATCGG
GCAGCAGCCTCTCCTTTGGGGCATCTTCAGCACCCGCCCAAGGCTTTGTTGGTGTTGGACCGTTCGGATC
GGCGGCCCCTTCATTTTCCATTGGTGCGGGATCCAAGACCCCAGGGGCTCGACAGCGACTGCAGGCCCGA
AGGCAGCACACCCGCAAAAAGTAG

Translation (987 aa):
MVCSPVTVRIAPPDRRFSRSAIPEQIISSTLSSPSSNAPDPCAKETVLSALKEKKKKRTVEEEDQIFLDG
QENKRRRHDSSGSGHSAFEPLVASGVPASFVPKPGSLKRGLNSQSSDDHLNKRSRSSSMSSLTGAYTSGI
PSSSRNAITSSYSSTRGISQLWKRNGPSSSPFSSPASSRSQTPERPAKKIREEELCHHSSSSTPLAADKE
SQGEKAADTTPRKKQNSNSQSTPGSSGQRKRKVQLLPSRRGEQLTLPPPPQLGYSITAEDLDLEKKASLQ
WFNQALEDKSDAASNSVTETPPTTQPSFTFTLPAAATASPPTSLLAPSTNPLLESLKKMQTPPSLPPCPE
SAGAATTEALSPPKTPSLLPPLGLSQSGPPGLLPSPSFDSKPPTTLLGLIPAPSMVPATDTKAPPTLQAE
TATKPQATSAPSPAPKQSFLFGTQNTSPSSPAAPAASSASPMFKPIFTAPPKSEKEGLTPPGPSVSATAP
SSSSLPTTTSTTAPTFQPVFSSMGPPASVPLPAPFFKQTTTPATAPTTTAPLFTGLASATSAVAPITSAS
PSTDSASKPAFGFGINSVSSSSVSTTTSTATAASQPFLFGAPQASAASFTPAMGSIFQFGKPPALPTTTT
VTTFSQSLPTAVPTATSSSAADFSGFGSTLATSAPATSSQPTLTFSNTSTPTFNIPFGSSAKSPLPSYPG
ANPQPAFGAAEGQPPGAAKPALTPSFGSSFTFGNSAAPAPATAPTPAPASTIKIVPAHVPTPIQPTFGGA
THSAFGLKATASAFGAPASSQPAFGGSTAVFSFGAATSSGFGATTQTASSGSSSSVFGSTTPSPFTFGGS
AAPAGSGSFGINVATPGSSATTGAFSFGAGQSGSTATSTPFTGGLGQNALGTTGQSTPFAFNVGSTTESK
PVFGGTATPTFGQNTPAPGVGTSGSSLSFGASSAPAQGFVGVGPFGSAAPSFSIGAGSKTPGARQRLQAR
RQHTRKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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