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Report for CCDS32669.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32669.1 Public Homo sapiens 17 SPATA32 24 110 108 CCDS HistoryNCBI Gene:124783Re-query CCDS DB by CCDS ID:32669.1Re-query CCDS DB by GeneID:124783See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32669.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000331780.5 ENSP00000331532.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000331780.5Link to Ensembl Protein Viewer:ENSP00000331532.4Re-query CCDS DB by Nucleotide ID:ENST00000331780Re-query CCDS DB by Protein ID:ENSP00000331532
Original member Current member NCBI NM_152343.3 NP_689556.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152343.3Link to Protein Sequence:NP_689556.2Re-query CCDS DB by Nucleotide ID:NM_152343Re-query CCDS DB by Protein ID:NP_689556Link to BLAST:NP_689556.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689556.2 384 Q96LK8 384 100% 0 0

Chromosomal Locations for CCDS 32669.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 45254426 45254513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45255115 45256073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45256376 45256415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45257153 45257207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45262004 45262016 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1155 nt):
ATGGGGGTGACAGGTGCCCATGGATTTCCATGCTGCGGCAAAGGGTCAGTGGAGGTTGCAGAGATGCGAG
ATGACTTAAGTCAACACCAGATACAAGAGGAACAGGAGCTGGAGGCAGACATGCTAGAGCAGAAGCCCCA
ACTCCAAGTGGACCTGGACCTGGACCCAGACCCAGACCCAGACCCAGAACTGGAGATCGGACAGGTGCCG
GCTTTACTGGAGTCAGAGCTATACCCAGCCCTCAAGCTTGAAGCTGAGCTGGACACGGAAGCCAACTCGA
ACGAGGAGTCTGACTTTGAAGAACCCATGCAGCTGGTATGCAAGATAGAGTCCGTCCACTCCAACATGGG
GCTGCCCACGCCACAGACCTTCAGACCGTGGAGTCTGAATTCAAACTGCCGGAGTTTCACGGAGGAGAAC
CACGTGTCTGCCTGCCATCACTCCATCAGTGCGCAGACCTCCAAGCACCTCTTCTGGGCAAACAAGCTCA
TCCAGGCCTCAGAGCACAGCCTGCAGCGGGCCATCAACATGCAGCTCAACAATGGCAGCGCAGGCCAGCC
CATCAGATCCCCGCTCCGGGAGGCCATCCCCACCAACGCCCTGTGCTCCGAGGAGCAGCTCCAGATCCCT
GATGCCCACTCAGCTCCTCCAACCACAAGCTCCCAGGCACCAAGCCCCCTCCTGTCCTCAGATCTCCCGC
CACCCATTGACCTGACAGAGCTAATCACCTTTGCATCTTCCCTGGCCATGGCCTCCTCCAGCAGGATGGA
CCTGCCCAGTTTGGAACACATGATGAAAGCTCCACCCCAGGAGGCTCTGGAGCCTTCCACAGAGCCCCTC
CTGACCACTGTGGAGGAGCGAGAGCCAGAAAATCACGCAGAGACCCTGCCAGAGAAACCACGCGAAGCCA
GAGCACCACTGAAATCTTGGAGTCAGGAAGACAAGAACTTCGCTCAATCTTACTTTGACTTCAGCAAGCC
GGGGATCAAGAGGGCCACCATCAAAGGGCAAATCCAGCTTCTCCAGCCACCAGCCACGTCCCCTCTGCTG
CAGGGAAGCAAGGAAGACTCAGTGCCGCCAGGAAAAGAGAAAGAGAATCCATTATTGGTGAAAATCCATT
TTAAGCTGTCAGCCCCCACAATCCCAGAGAAATGA

Translation (384 aa):
MGVTGAHGFPCCGKGSVEVAEMRDDLSQHQIQEEQELEADMLEQKPQLQVDLDLDPDPDPDPELEIGQVP
ALLESELYPALKLEAELDTEANSNEESDFEEPMQLVCKIESVHSNMGLPTPQTFRPWSLNSNCRSFTEEN
HVSACHHSISAQTSKHLFWANKLIQASEHSLQRAINMQLNNGSAGQPIRSPLREAIPTNALCSEEQLQIP
DAHSAPPTTSSQAPSPLLSSDLPPPIDLTELITFASSLAMASSSRMDLPSLEHMMKAPPQEALEPSTEPL
LTTVEEREPENHAETLPEKPREARAPLKSWSQEDKNFAQSYFDFSKPGIKRATIKGQIQLLQPPATSPLL
QGSKEDSVPPGKEKENPLLVKIHFKLSAPTIPEK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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