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Genome Displays Related Resources Gene HomoloGene MANE RefSeq
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Report for CCDS39360.2 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
39360.2 |
Public |
Mus musculus |
5 |
Sdk1 |
23 |
108 |
98 |
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Public Note for CCDS 39360.1 |
The coding region has been updated to extend the N-terminus to one that is more supported by available conservation, transcript and protein data. |
Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47
Review status: Reviewed (by RefSeq, Havana and CCDS collaboration) Sequence IDs included in CCDS 39360.2
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000085774.10 |
ENSMUSP00000082928.4 |
Accepted |
alive |
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NCBI |
NM_177879.5 |
NP_808547.3 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_808547.3 |
2193 |
Q3UH53-1 |
2193 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 39360.2
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (6582 nt): ATGGCCCGCGCCCGGCCCTCGGTGGCGGGCGGCGGAGTCGCGGCGCCCCCTGAGCGAGCGGGGCCCGGGC GGCCGCGGAGGAGCCGGACCGGTCACCACTGCGACCCCGAGTGCCCAGGGCTGCGCGCAGCGCCCAGGAC CCCCGGGCCGGGCGCGGGCCGGCGGGCGGCAAAGTTGAGGCCGGGCCGCGGGTGGTGGGCGCTGCTGTTG CTCCAGCTGCACTTGCTGCGGGCGCTGGCGCAAGATGACGTTGCACCGTATTTCAAAACGGAGCCGGGCC TGCCACAGATCCACCTGGAAGGGAACCGCCTGGTGCTCACCTGCCTGGCTGAAGGGAGCTGGCCTCTGGA ATTCAAGTGGATACGGAACGACAGTGAGCTTACCACCTACAGCAGCGAATATAAGTATATCATCCCCTCT TTGCAGAAGCTGGACGCCGGGTTTTACCGCTGCGTGGTGCGGAACAGGATGGGAGCTCTCTTGCAGAGAA AATCAGAAATTCAAGTAGCATATATGGGGAACTTCATGGATACAGACCAGAGGAAAACAGTTTCTCAAGG GCATGCGGCACTTCTCAACTTACTGCCTATCGTCAGCTGCCCCCAACCTCAAGTGACGTGGTTTAGAGAA GGACACAAGATTATTCCCAGCAGCAGAATAGCCATCACATTGGAGAATCAGCTGGTGATCCTTGCTACAA CAGCGAGTGATGCTGGGGCTTACTACGTGCAGGCTGTGAATGAGAAGAACGGAGAGAACAAGACAAGCCC GTTCATCCACCTGAGCGTAGCACGAGATACTGGTACCCACGAGGCCATGGCCCCAATCATCGTGGTTGCC CCAGGCAACAGAAGTGTGGTAGCAGGGTCCAGTGAGACCACCTTGGAGTGCATAGCCAATGCCAGGCCCG TGGAGGAGCTGAGTGTGCACTGGAAGAGAAACGGAGTTCGACTCACAAGTGGACTACACAGCTACGGGAG GCGCCTTACCATCACCAATCCGACATCAGCAGACACCGGGATGTACGTGTGCGAGGCGACACTCCGGGGG AGCACATTTGAGCCAGCCAGGGCCAGAGCCTTCCTTTCCATCATAGAGCCACCATATTTCACTGCTGAGC CAGAGAGTCGGATTTTAGGGGAAGTGGAAGAAACTATGGACATCCCATGTCGAGCCATGGGGGTTCCTCT TCCCACTCTCCAGTGGTACAAAGATGCTGTTCCCCTCAGCAAACTCCAGAACCCTAGGTATAAAGTTCTC CCCAGCGGAGGCCTCCACATTCAGAAGTTGAGTCCAGAAGACTCTGGAATCTTCCAGTGCTTTGCCAGTA ACGAAGGAGGAGAGGTCCAGACTCACACCTACCTGGATGTGACCAATATTGCTCCTGCCTTCACCCAGCG TCCAGTGGACACCACGGTTACTGACGGGATGACGGCTGTCCTGAGGTGTGAGGTGTCCGGAGCTCCCAAA CCCGCCATCACATGGAAGAGAGGGAACCACATTCTGGCCAGTGGCTCTGTCCGGATTCCTAGGTTCATGC TGCTGGAATCTGGGGGGCTGAGAATAGCCCCCGTCTTCATCCAGGATGCTGGCAACTACACCTGCTATGC AGCCAACACGGAGGCTTCTGTGAACGCCTCCGCCATGCTCACCGTGTGGAATCGAACGTCCATCGTTCAC CCTCCAGAAGACCGCGTGGTGATTAAGGGGACGACGGCCACCCTGTGCTGCGGAGCTACCCACGACCCTC GGACCTCTCTCCGCTACGTTTGGAAAAAGGACAACGTGGTCATCACAGCGTCTAGCAGCTCCAGAATTGT GGTGGAAAAGGATGGGTCGCTTGTCATTAGCCAGACGTGGTCAGGGGACATTGGTGACTACACCTGTGAA ATCATATCCGAGGGAGGGAGTGACTCCCGGACGGCACGGCTGGAAGTGATTGAGCTGCCTCACCCACCTC AAAACCTGCTGGCCAGCTTGAGTCCAGCACGCAGCCACTCGGTGACACTATCTTGGGTTCGGCCCTTTGA TGGAAACAGCCCGGTCCTTTACTACATTGTGCAAGTATCTGAAAACAACTCTCCATGGAAAGTGCATTTG TCAAATGTTGGCCCGGAGATGACAGGCGTCACTGTGAGTGGCTTGACTCCAGCCCGGACCTATCAGTTCA GGGTGTGCGCTGTGAATCAAGTGGGCAAGGGCCAGTACAGCACAGAGACAAGCAGATTGATGTTACCCGA AGAACCACCGAGTGCTCCCCCAAAAAACATTGTGGCCAGTGGGAGAACCAACCAGTCCATCATGGTACAG TGGCAGCCACCACCCGAAACAGAGCACAATGGGGTGCTTCGGGGCTACATCCTCAGGTACCGCCTGGCTG GCCTGCCTGGGGAACACCAGCAGAGGAACATCAGCAGCCCAGAGGTGAACTACTGCCTGGTCACCGACCT CATCATCTGGACCCAGTATGAGATCCAGGTGGCTGCCTACAACGGGGCAGGCCTGGGTGTCTTCAGCAGG GCAGTGACCGAGTACACCTTACAAGGAGTGCCCACTGCACCTCCCCAGAACGTGCAGGCAGAGGCTGTGA ATTCCACCACTGTGCACTTCCTGTGGAACCCGCCACCCCAGCAGTTCATCAACGGCATCAACCAGGGATA CAAGCTCCTAGCATGGCCGGCAGATGCTCCTGAGACTGTCACTGTAGTCACTATTGCTCCTGACTTCCAT GGAATCCATCATGGGTACATAACAAACTTGAAGAAGTTCACTGCCTACTTCACATCCGTCCTGTGTTTTA CCACCCCGGGGGATGGGCCTCCAAGTTCACCTCAGCTCGTGTGGACCCATGAGGACAAGCCGGGAGCTGT GGGGCACCTGAGCTTCACGGAGATTTTGGACACCTCTCTCAAGGTCAGCTGGCAGGAGCCCCTGGAGAGA AACGGCATCATTATGGGCTATCAGATTTCCTGGGAGGTGTATGGGAGGAATGACTCTCGACTCACGCACA CCCTCAACAGCACGATGCACGAGTATAAGATCCAAGGACTGTCATCACTCACCACCTATACCATCGATGT GGCTGCCTTGACCGCCGCAGGCGTGGGCGTGACCACATCATCCACCATCTCTTCAGGTGTACCCCCAGAT CTTCCTGGCGCTCCATCCAATCTGGTCATTTCCAACATCAGCCCTCGCTCAGCCACACTCCAGTTCCGAC CTGGCTATGATGGGAAGACGGCCATCTGCAGGTGGATTGTGGAGGGGCAGGTTGGTGCCATCGGGGACGA GGAGGAGTGGGTTACCCTCTATGAGGAGGAGAATGAGCCCGATGCCCAGATGTTGGAGATACCAAACCTC ACACCCTACACACACTACAGGTTTCGAATGAGGCAAGTGAACATCGTGGGTCCCAGCCCCTTCAGCCAGT CATCCAGGGTCATCCAGACCCTACAGGCCCCACCTGATGTGGCTCCAACCAGCCTCACTGTCCGAACAGC CAGTGAGACCAGCCTGAGGCTACGCTGGGTGCCTCTGCCTGATTCCCAGTACAATGGGAACCCTGAGTCT GTGGGCTACAGGGTGAAGTATTGGCGTTCTGACCAACCATCGTCAGCTCTGGCCCAAGTTGTCAGTGACC GTCTGGAGAGGGAGCTGACCATCGAGGAACTGGAGGAGTGGACAGAGTACGAGTTGCGGATGCAGGCCTT CAACGCCATTGGGGCTGGGCCCTGGAGTGAGCTGGTGCGGGGCCGCACGCGGGAGTCAGTTCCTTCAGCA GCTCCTGAAAATGTGTCTGCAGAGGCTGTCAGCTCCACCCAGATCCTACTGACTTGGGCTTCAGTTCCTG AGCAGGACCAGAATGGGCTCATCCTAGGCTACAAGGTTCTATACTGTGCCAAAGACCTGGACCCAGAGCC CAGAAGCCACGTGGTACGAGGGAACCACACGCAGTCTGCGCTGCTGGCTGGCCTGCGAAAGTTCGTGGTC TATGAGCTCCAAGTGCTGGCGTTCACACGGATCGGGAATGGGGTCCCCAGCTCACCTCTCATCCTGGAGC GCACCAAAGATGACACCCCAGGTCCCCCCGTGCGGCTGGTGTTCCCCGAAGTAAGACTTACTGCAGTGCG GATTGTGTGGCAGCCCCCAGAGGAGCCCAATGGTGTGATTCTGGGGTACCAGATCGCCTACCGCCTGGCC AGCGGTAGTCCTCACACCTTCACCACTGTTGAGGTGGGTGCCACGGTGCGGCAATTCACAGCCACAGAGC TGGCCCCGGAGTCTGCCTACATCTTCAGACTGTCTGCTAAGACGAGACAGGGTTGGGGTGAGCCCCTGGA GGCCACAGTTATCACTACTGAGAAGAGAGAGAGGCCAGCGCCCCCCAGAGAGCTCCTGGTACCCCAGGCT GAAGTGACAGCTCGTAGCCTCAGGCTCCAGTGGGTCCCTGGCAGTGATGGGGCCTCTCCGATCCGGTACT TCACGGTGCAGGTGCGAGAGCTGCCAGGTGGAGAGTGGCAGACCTACTCCTCATCTATCAGTCATGAGGC CACAGCCTGTGCTGTTGAGAGGCTGAGGCCTTTCACCTCCTACAAGCTGCGCCTGAAGGCCACCAATGAC ATTGGGGACAGTGACTTCAGTGCAGAAACAGAGGCTGTGACCACTTTGCAAGATGTTCCAGGAGAGCCAC CAGGGTCTGTCTCAGCCACACCGCACACCACGTCCTCCGTTCTGATCCAGTGGCAGCCTCCCCGGGATGA GAGCCTGAACGGTCTTCTGCAAGGCTACAGGATCTACTACCGTGAGCTGGAGTCTGAGACAGGCATGAGC CCTGAGCCCAAGACACTCAAGAGCCCCTCTGCCTTACGTGCTGAACTCACCGCTCAAAGCAGCTTCAAGA CCGTGAACAGCAGCTCCTCGTTAACCACCTATGAATTAACACATCTGAAGAAGTACCGGCGCTATGAAGT CATCATGACTGCTTATAACATCATTGGTGAGAGCCCAGCCAGTGTACCAGTGGAAGTCTTCGTTGGTGAG GCTGCCCCAGCGATGGCCCCACAGAATGTCCAGGTGACCCCACTCACGGCCAGCCAGCTGGAGGTCACAT GGGACCCACCGCCCCCAGAGAGCCAGAATGGGAACATCCAGGGTTATAAGGTTTACTACTGGGAGGCAGA CAGTCGCAATGAGACAGAGAAAATGAAGGTCCTCTTCCTCCCCGAGCCTGTGGTGAAGATCAAGGATCTC ACCAGCCACACAAAGTACCTGATCAGCATCTCAGCCTTCAATGCTGCTGGTGATGGGCCCAAGAGTGACC CGTGCCAAGGACGCACACATCAGGCGGCTCCAGGGCCCCCCAGCTTCTTGGCATTCTCAGAAATAACTTC TACCACACTCAACGTATCCTGGGGAGAGCCATCAGCTGCCAACGGCATCCTACAGGGCTATCGAGTGGTG TATGAGCCCTTAGCACCAGTGCAAGGCGTGAGCAAGGTGGTGACCGTGGACGTGAAAGGCAACTGGCAAC GTTGGCTGAAGGTGCGGGACCTCACCAAGGGAGTGACCTACTTCTTCCGTGTCCAGGCGCGGACCATCGC CTACGGGCCGGAGCTCCAAGCCAATGTCACTGCAGGGCCAGCCGAGGGGTCCCCAGGCTCACCAAGAAAT GTCCTTGTCACCAAATCTGCCTCTGAGCTGACCCTTCAGTGGACAGAGGGAAATGCTGGTACCACACCCA CTACAGGCTACGTCATAGAAGCCAGGCCATCAGATGAAGGCTTATGGGACATGTTTGCAAAGGACATTCC CAGGAGTGCTACATCATACACTGTGGACCTGGATAAGTTGCGGCAAGGGGTGACCTACGAGTTCCGGGTG GTGGCTGTGAACAAGGCAGGCTTTGGGGAGCCCAGCCGCCCTTCCATTGCAGTGTCAGCACAAGCTGAAG CCCCGTTCTACGAGGAGTGGTGGTTCCTGCTGGTGATGGCGCTCTCCAGCCTTCTCCTCATCCTCCTGGT GGTCTTCGTGCTGGTCCTGCATGGACAAAGCAAGAAGTACAAGAGCTGCAGCACAGGTAAGGGCATCTCC AACATGGAGGAGACAGTGACCCTGGATAACGGAGGTTTTGCCGCCTTGGAGCTCAACAGCCGCCACCTCA ATGTCAAGAGCACCTTCTCAAAGAAGAACGGAACCAGATCTCCACCCCGACCAAGCCCCGGAGGTCTTCA CTACTCTGACGAGGACATCTGCAACAAATACAACGGCGCCGTGCTGACGGAGAGTGTGAACCTCAAGGAG AAGTCGGTGGATGGGTCGGAATCCGAGGCCTCTGACTCAGACTATGAGGAAGCCCTGCCCAAGCACTCCT TCGTCAACCACTACATGAGCGACCCCACCTACTACAACTCTTGGAAGCGGCGTCCCCCTGCCGCAGCACC ACATAGGTACGAGGCGGTGGCAGGGGCAGAAGCCGGCCCACACCTGCACACGGTCATCACCACACAGAGC GCGGGCGGAGTCTACACACCAGCTGGCCCCGGAGCCCGGGCCCCCCTCACCGGCTTCTCCTCCTTCGTGT GA
Translation (2193 aa): MARARPSVAGGGVAAPPERAGPGRPRRSRTGHHCDPECPGLRAAPRTPGPGAGRRAAKLRPGRGWWALLL LQLHLLRALAQDDVAPYFKTEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWIRNDSELTTYSSEYKYIIPS LQKLDAGFYRCVVRNRMGALLQRKSEIQVAYMGNFMDTDQRKTVSQGHAALLNLLPIVSCPQPQVTWFRE GHKIIPSSRIAITLENQLVILATTASDAGAYYVQAVNEKNGENKTSPFIHLSVARDTGTHEAMAPIIVVA PGNRSVVAGSSETTLECIANARPVEELSVHWKRNGVRLTSGLHSYGRRLTITNPTSADTGMYVCEATLRG STFEPARARAFLSIIEPPYFTAEPESRILGEVEETMDIPCRAMGVPLPTLQWYKDAVPLSKLQNPRYKVL PSGGLHIQKLSPEDSGIFQCFASNEGGEVQTHTYLDVTNIAPAFTQRPVDTTVTDGMTAVLRCEVSGAPK PAITWKRGNHILASGSVRIPRFMLLESGGLRIAPVFIQDAGNYTCYAANTEASVNASAMLTVWNRTSIVH PPEDRVVIKGTTATLCCGATHDPRTSLRYVWKKDNVVITASSSSRIVVEKDGSLVISQTWSGDIGDYTCE IISEGGSDSRTARLEVIELPHPPQNLLASLSPARSHSVTLSWVRPFDGNSPVLYYIVQVSENNSPWKVHL SNVGPEMTGVTVSGLTPARTYQFRVCAVNQVGKGQYSTETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQ WQPPPETEHNGVLRGYILRYRLAGLPGEHQQRNISSPEVNYCLVTDLIIWTQYEIQVAAYNGAGLGVFSR AVTEYTLQGVPTAPPQNVQAEAVNSTTVHFLWNPPPQQFINGINQGYKLLAWPADAPETVTVVTIAPDFH GIHHGYITNLKKFTAYFTSVLCFTTPGDGPPSSPQLVWTHEDKPGAVGHLSFTEILDTSLKVSWQEPLER NGIIMGYQISWEVYGRNDSRLTHTLNSTMHEYKIQGLSSLTTYTIDVAALTAAGVGVTTSSTISSGVPPD LPGAPSNLVISNISPRSATLQFRPGYDGKTAICRWIVEGQVGAIGDEEEWVTLYEEENEPDAQMLEIPNL TPYTHYRFRMRQVNIVGPSPFSQSSRVIQTLQAPPDVAPTSLTVRTASETSLRLRWVPLPDSQYNGNPES VGYRVKYWRSDQPSSALAQVVSDRLERELTIEELEEWTEYELRMQAFNAIGAGPWSELVRGRTRESVPSA APENVSAEAVSSTQILLTWASVPEQDQNGLILGYKVLYCAKDLDPEPRSHVVRGNHTQSALLAGLRKFVV YELQVLAFTRIGNGVPSSPLILERTKDDTPGPPVRLVFPEVRLTAVRIVWQPPEEPNGVILGYQIAYRLA SGSPHTFTTVEVGATVRQFTATELAPESAYIFRLSAKTRQGWGEPLEATVITTEKRERPAPPRELLVPQA EVTARSLRLQWVPGSDGASPIRYFTVQVRELPGGEWQTYSSSISHEATACAVERLRPFTSYKLRLKATND IGDSDFSAETEAVTTLQDVPGEPPGSVSATPHTTSSVLIQWQPPRDESLNGLLQGYRIYYRELESETGMS PEPKTLKSPSALRAELTAQSSFKTVNSSSSLTTYELTHLKKYRRYEVIMTAYNIIGESPASVPVEVFVGE AAPAMAPQNVQVTPLTASQLEVTWDPPPPESQNGNIQGYKVYYWEADSRNETEKMKVLFLPEPVVKIKDL TSHTKYLISISAFNAAGDGPKSDPCQGRTHQAAPGPPSFLAFSEITSTTLNVSWGEPSAANGILQGYRVV YEPLAPVQGVSKVVTVDVKGNWQRWLKVRDLTKGVTYFFRVQARTIAYGPELQANVTAGPAEGSPGSPRN VLVTKSASELTLQWTEGNAGTTPTTGYVIEARPSDEGLWDMFAKDIPRSATSYTVDLDKLRQGVTYEFRV VAVNKAGFGEPSRPSIAVSAQAEAPFYEEWWFLLVMALSSLLLILLVVFVLVLHGQSKKYKSCSTGKGIS NMEETVTLDNGGFAALELNSRHLNVKSTFSKKNGTRSPPRPSPGGLHYSDEDICNKYNGAVLTESVNLKE KSVDGSESEASDSDYEEALPKHSFVNHYMSDPTYYNSWKRRPPAAAPHRYEAVAGAEAGPHLHTVITTQS AGGVYTPAGPGARAPLTGFSSFV
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