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Report for CCDS56014.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56014.1 Public Homo sapiens 17 P2RX5 24 110 108 CCDS HistoryNCBI Gene:5026Re-query CCDS DB by CCDS ID:56014.1Re-query CCDS DB by GeneID:5026See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56014.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000345901.7 ENSP00000342161.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000345901.7Link to Ensembl Protein Viewer:ENSP00000342161.3Re-query CCDS DB by Nucleotide ID:ENST00000345901Re-query CCDS DB by Protein ID:ENSP00000342161
Original member Current member NCBI NM_001204520.2 NP_001191449.1 Accepted alive Link to Nucleotide Sequence:NM_001204520.2Link to Protein Sequence:NP_001191449.1Re-query CCDS DB by Nucleotide ID:NM_001204520Re-query CCDS DB by Protein ID:NP_001191449Link to BLAST:NP_001191449.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001191449.1 398 Q93086-5 398 100% 0 0

Chromosomal Locations for CCDS 56014.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 3673868 3673877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 3679590 3679784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 3681896 3681978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 3688012 3688105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 3688626 3688759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 3689492 3689630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 3690070 3690150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 3690427 3690523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 3690605 3690680 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 3691644 3691794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 3695869 3696005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1197 nt):
ATGGGGCAGGCGGGCTGCAAGGGGCTCTGCCTGTCGCTGTTCGACTACAAGACCGAGAAGTATGTCATCG
CC
AAGAACAAGAAGGTGGGCCTGCTGTACCGGCTGCTGCAGGCCTCCATCCTGGCGTACCTGGTCGTATG
G
GTGTTCCTGATAAAGAAGGGTTACCAAGACGTCGACACCTCCCTGCAGAGTGCTGTCATCACCAAAGTC
AAG
GGCGTGGCCTTCACCAACACCTCGGATCTTGGGCAGCGGATCTGGGATGTCGCCGACTACGTCATTC
CA
GCCCAGAATGAAGGCATTCCTGATGGCGCGTGCTCCAAGGACAGCGACTGCCACGCTGGGGAAGCGGT
T
ACAGCTGGAAACGGAGTGAAGACCGGCCGCTGCCTGCGGAGAGAGAACTTGGCCAGGGGCACCTGTGAG
ATC
TTTGCCTGGTGCCCGTTGGAGACAAGCTCCAGGCCGGAGGAGCCATTCCTGAAGGAGGCCGAAGACT
TC
ACCATTTTCATAAAGAACCACATCCGTTTCCCCAAATTCAACTTCTCCAAAAGCAATGTGATGGACGT
C
AAGGACAGATCTTTCCTGAAATCATGCCACTTTGGCCCCAAGAACCACTACTGCCCCATCTTCCGACTG
GGC
TCCGTGATCCGCTGGGCCGGGAGCGACTTCCAGGATATAGCCCTGGAGGGTGGCGTGATAGGAATTA
AT
ATTGAATGGAACTGTGATCTTGATAAAGCTGCCTCTGAGTGCCACCCTCACTATTCTTTTAGCCGTCT
G
GACAATAAACTTTCAAAGTCTGTCTCCTCCGGGTACAACTTCAGATTTGCCAGATATTACCGAGACGCA
GCC
GGGGTGGAGTTCCGCACCCTGATGAAAGCCTACGGGATCCGCTTTGACGTGATGGTGAACGGCAAGG
GT
GCTTTCTTCTGCGACCTGGTACTCATCTACCTCATCAAAAAGAGAGAGTTTTACCGTGACAAGAAGTA
C
GAGGAAGTGAGGGGCCTAGAAGACAGTTCCCAGGAGGCCGAGGACGAGGCATCGGGGCTGGGGCTATCT
GAG
CAGCTCACATCTGGGCCAGGGCTGCTGGGGATGCCGGAGCAGCAGGAGCTGCAGGAGCCACCCGAGG
CG
AAGCGTGGAAGCAGCAGTCAGAAGGGGAACGGATCTGTGTGCCCACAGCTCCTGGAGCCCCACAGGAG
C
ACGTGA


Translation (398 aa):
MGQAGCKGLCLSLFDYKTEKYVIAKNKKVGLLYRLLQASILAYLVVWVFLIKKGYQDVDTSLQSAVITKV
K
GVAFTNTSDLGQRIWDVADYVIPAQ
NEGIPDGACSKDSDCHAGEAVTAGNGVKTGRCLRRENLARGTCE
I
FAWCPLETSSRP
EEPFLKEAEDFTIFIKNHIRFPKFNFSKSNVMDVKDRSFLKSCHFGPKNHYCPIFRL
G
SVIRWAGSDFQDIALE
GGVIGINIEWNCDLDKAASECHPHYSFSRLDNKLSKSVSSGYNFRFARYYRDA
A
GVEFRTLMKAYGIRFDVMVNGK
GAFFCDLVLIYLIKKREFYRDKKYEEVRGLEDSSQEAEDEASGLGLS
E
QLTSGPGLLGMPEQQELQEPPEAKRGSSSQKGNGSVCPQLLEPH
RST



Links Key
 Links to:   History report
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 Genome Browser Links:   Ensembl Genome Browser
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