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Report for CCDS74207.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74207.1 Public Homo sapiens 18 ZSCAN30 24 110 108 CCDS HistoryNCBI Gene:100101467Re-query CCDS DB by CCDS ID:74207.1Re-query CCDS DB by GeneID:100101467See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 74207.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000610712.1 ENSP00000480152.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000610712.1Link to Ensembl Protein Viewer:ENSP00000480152.1Re-query CCDS DB by Nucleotide ID:ENST00000610712Re-query CCDS DB by Protein ID:ENSP00000480152
Original member Current member NCBI NM_001288711.2 NP_001275640.1 Accepted alive Link to Nucleotide Sequence:NM_001288711.2Link to Protein Sequence:NP_001275640.1Re-query CCDS DB by Nucleotide ID:NM_001288711Re-query CCDS DB by Protein ID:NP_001275640Link to BLAST:NP_001275640.1

Chromosomal Locations for CCDS 74207.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 35253450 35254373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (924 nt):
ATGGTGGCTGGCAAAGTGTTGATGGCAAAGCAAGAAATTGTTGAATGTGTAGCCTCAGCAGCTATGATAT
CGCCGGGAAAACTTCCTGGAGAAACACATTCCCAACGGATAGCTGAAGAAGCTTTGGGAGGTCTGGACAA
CTCTAAGAAGCAAAAGGGAAATGCTGCAGGGAACAAAATCAGTCAGCTTCCTTCCCAGGACAGACATTTC
AGTCTGGCAACCTTCAACAGAAGAATCCCCACAGAACACAGTGTCCTTGAATCTCATGAGAGTGAAGGAA
GTTTCAGTATGAATTCAAATGATATTACACAACAGAGCGTTGACACTAGGGAAAAGCTCTATGAGTGCTT
TGACTGTGGGAAGGCCTTTTGCCAGAGCTCAAAGCTGATTAGACATCAGAGAATTCATACTGGAGAGAGA
CCTTATGCATGTAAAGAATGTGGCAAAGCCTTCAGTTTGAGCTCAGACCTTGTTAGACATCAGAGAATTC
ATAGTGGTGAAAAACCCTATGAATGTTGTGAATGTGGAAAAGCCTTCAGGGGCAGTTCAGAGCTCATCAG
GCATCGGAGAATCCACACTGGAGAGAAGCCTTATGAATGTGGAGAATGTGGGAAGGCCTTCAGCCGGAGC
TCAGCCCTTATTCAGCATAAGAAAATTCACACTGGAGATAAAAGCTATGAATGTATTGCATGTGGTAAGG
CTTTTGGTAGGAGTTCTATCCTTATTGAACATCAAAGAATTCACACTGGAGAGAAACCTTATGAATGTAA
TGAATGTGGAAAATCCTTCAATCAGAGCTCAGCCCTCACCCAGCACCAGAGAATTCACACTGGAGAGAAG
CCTTATGAATGTAGTGAATGTAGAAAAACATTTAGGCATAGGTCAGGCCTTATGCAGCATCAGAGAACAC
ACACCAGAGTTTAA

Translation (307 aa):
MVAGKVLMAKQEIVECVASAAMISPGKLPGETHSQRIAEEALGGLDNSKKQKGNAAGNKISQLPSQDRHF
SLATFNRRIPTEHSVLESHESEGSFSMNSNDITQQSVDTREKLYECFDCGKAFCQSSKLIRHQRIHTGER
PYACKECGKAFSLSSDLVRHQRIHSGEKPYECCECGKAFRGSSELIRHRRIHTGEKPYECGECGKAFSRS
SALIQHKKIHTGDKSYECIACGKAFGRSSILIEHQRIHTGEKPYECNECGKSFNQSSALTQHQRIHTGEK
PYECSECRKTFRHRSGLMQHQRTHTRV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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