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Report for CCDS31565.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31565.1 Public Homo sapiens 11 OR10V1 24 110 108 CCDS HistoryNCBI Gene:390201Re-query CCDS DB by CCDS ID:31565.1Re-query CCDS DB by GeneID:390201See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 31565.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000307552.3 ENSP00000302199.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000307552.3Link to Ensembl Protein Viewer:ENSP00000302199.2Re-query CCDS DB by Nucleotide ID:ENST00000307552Re-query CCDS DB by Protein ID:ENSP00000302199
Original member Current member NCBI NM_001005324.1 NP_001005324.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001005324.1Link to Protein Sequence:NP_001005324.1Re-query CCDS DB by Nucleotide ID:NM_001005324Re-query CCDS DB by Protein ID:NP_001005324Link to BLAST:NP_001005324.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001005324.1 309 Q8NGI7 309 100% 0 0

Chromosomal Locations for CCDS 31565.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 59712916 59713845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (930 nt):
ATGGAAGGAATAAATAAAACTGCAAAGATGCAGTTTTTCTTTCGTCCATTCTCACCTGACCCTGAGGTCC
AGATGCTGATTTTTGTGGTCTTCCTGATGATGTATCTGACCAGCCTCGGTGGAAATGCTACAATTGCAGT
CATTGTTCAGATCAATCATTCCCTCCACACCCCCATGTACTTTTTCCTGGCTAATCTGGCAGTTCTAGAA
ATCTTCTATACATCTTCCATCACCCCATTGGCCTTGGCAAACCTCCTTTCAATGGGCAAAACTCCTGTTT
CCATCACGGGATGTGGCACCCAGATGTTTTTCTTTGTCTTCTTGGGTGGGGCTGATTGTGTCCTGCTGGT
AGTCATGGCTTATGACCAGTTTATAGCGATCTGTCACCCTCTGCGATACAGGCTCATCATGAGCTGGTCC
TTGTGTGTGGAGCTGCTGGTAGGCTCCTTGGTGCTGGGGTTCCTGTTGTCACTGCCACTCACCATTTTAA
TCTTCCATCTCCCATTCTGCCACAATGATGAGATCTACCACTTCTACTGTGACATGCCTGCAGTCATGCG
CCTGGCTTGTGCAGACACACGCGTTCACAAGACTGCTCTGTATATCATCAGCTTCATCGTCCTTAGCATC
CCCCTCTCATTGATCTCCATCTCCTATGTCTTCATCGTGGTAGCCATTTTACGGATCCGGTCAGCAGAAG
GGCGCCAGCAAGCCTACTCTACCTGCTCTTCTCACATCTTAGTGGTCCTCCTGCAGTATGGCTGCACCAG
CTTTATATACTTGTCCCCCAGTTCCAGCTACTCTCCTGAGATGGGCCGGGTGGTATCTGTGGCCTACACA
TTTATCACTCCCATTTTAAACCCCTTGATCTATAGTTTGAGGAACAAGGAACTGAAAGATGCCCTAAGGA
AAGCATTGAGAAAATTCTAG

Translation (309 aa):
MEGINKTAKMQFFFRPFSPDPEVQMLIFVVFLMMYLTSLGGNATIAVIVQINHSLHTPMYFFLANLAVLE
IFYTSSITPLALANLLSMGKTPVSITGCGTQMFFFVFLGGADCVLLVVMAYDQFIAICHPLRYRLIMSWS
LCVELLVGSLVLGFLLSLPLTILIFHLPFCHNDEIYHFYCDMPAVMRLACADTRVHKTALYIISFIVLSI
PLSLISISYVFIVVAILRIRSAEGRQQAYSTCSSHILVVLLQYGCTSFIYLSPSSSYSPEMGRVVSVAYT
FITPILNPLIYSLRNKELKDALRKALRKF


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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