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Report for CCDS82201.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82201.1 Public Homo sapiens 17 TMEM104 24 110 108 CCDS HistoryNCBI Gene:54868Re-query CCDS DB by CCDS ID:82201.1Re-query CCDS DB by GeneID:54868See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82201.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000582773.5 ENSP00000463205.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000582773.5Link to Ensembl Protein Viewer:ENSP00000463205.1Re-query CCDS DB by Nucleotide ID:ENST00000582773Re-query CCDS DB by Protein ID:ENSP00000463205
Original member Current member NCBI NM_001321264.3 NP_001308193.1 Accepted alive Link to Nucleotide Sequence:NM_001321264.3Link to Protein Sequence:NP_001308193.1Re-query CCDS DB by Nucleotide ID:NM_001321264Re-query CCDS DB by Protein ID:NP_001308193Link to BLAST:NP_001308193.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001308193.1 314 Q8NE00-2 314 100% 0 0

Chromosomal Locations for CCDS 82201.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 74777331 74777375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74785482 74785603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74788789 74788870 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74790200 74790296 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74790956 74791036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74795012 74795111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74795524 74795632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74819750 74819843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74838887 74839101 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (945 nt):
ATGGCGGGTGAAATTACAGAGACCGGGGAACTCTACTCTTCCTACGTTGGGCTGGTGTACATGTTTAACC
TCATCGTGGGCACGGGCGCACTCACCATGCCCAAGGCATTCGCCACTGCCGGGTGGCTTGTCAGCCTCGT
CCTGCTGGTGTTCCTGGGCTTCATGAGCTTCGTGACCACCACCTTTGTGATAGAGGCCATGGCTGCAGCC
AACGCGCAGCTCCACTGGAAGAGGATGGAGAACCTCAAGGAGGAGGAAGATGACGACTCCTCCACAGCCT
CAGACAGCGATGTTCTCATCCGGGACAACTACGAGCGGGCAGAGAAGCGGCCCATCCTGTCTGTGCAGAG
ACGTGGATCTCCCAACCCGTTTGAAATCACAGACCGGGTGGAAATGGGACAAATGGCCTCCATGTTCTTC
AATAAAGTGGGGGTCAACTTGTTCTATTTCTGCATCATCGTTTACCTGTATGGAGACCTCGCCATCTATG
CTGCTGCCGTGCCCTTCTCCCTCATGCAGGTGACCTGCAGCGCCACTGGCAATGACTCCTGCGGTGTGGA
AGCAGACACCAAATACAATGACACTGACCGGTGCTGGGGGCCCCTGCGCCGAGTGGACGCCTACCGCATC
TACTTGGCGATCTTCACTCTCCTCCTCGGACCGTTCACCTTCTTTGACGTCCAGAAGACCAAGTACCTGC
AGATCCTGACCTCTCTGATGAGATGGATCGATGGGCCCCCGGGGTCAGTGATGGGAAGAGCAGAAGAGGA
TGCCAGCCCAGCCTGGCCCAGGAGCAGGTGTCGTTGTGGAGGAAAGCTTAAACTCAACAGCCTCTACCCA
ACATCTGCCACCTGCATGGCCCCAGATGCCCCCGGTGCAGGCCAGGTCAAGGTGGGAGTAAACTTTCTTT
GCCTCCCTCCCCACAGAAGCACCAGACCCACCTGA

Translation (314 aa):
MAGEITETGELYSSYVGLVYMFNLIVGTGALTMPKAFATAGWLVSLVLLVFLGFMSFVTTTFVIEAMAAA
NAQLHWKRMENLKEEEDDDSSTASDSDVLIRDNYERAEKRPILSVQRRGSPNPFEITDRVEMGQMASMFF
NKVGVNLFYFCIIVYLYGDLAIYAAAVPFSLMQVTCSATGNDSCGVEADTKYNDTDRCWGPLRRVDAYRI
YLAIFTLLLGPFTFFDVQKTKYLQILTSLMRWIDGPPGSVMGRAEEDASPAWPRSRCRCGGKLKLNSLYP
TSATCMAPDAPGAGQVKVGVNFLCLPPHRSTRPT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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