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Conserved domains on  [gi|1040205946|pdb|5JKC|A]
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Chain A, Izumo sperm-egg fusion protein 1

Protein Classification

IZUMO and Izumo-Ig domain-containing protein( domain architecture ID 11237186)

IZUMO and Izumo-Ig domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
IZUMO pfam15005
Izumo sperm-egg fusion, Ig domain-associated; This IZUMO family is a domain just upstream of ...
 5-148 4.48e-71

Izumo sperm-egg fusion, Ig domain-associated; This IZUMO family is a domain just upstream of the immunoglobulin domain on Izumo proteins in higher eukaryotes. The actual function of this region of the Izumo proteins is not known. The full-length protein is a molecule with a single immunoglobulin (Ig) domain. It is thought that Izumo proteins bind to putative Izumo receptors on the oocyte. Izumo is not detectable on the surface of fresh sperm but becomes exposed only after an exocytotic process, the acrosome reaction, has occurred. Studies have shown that knock-out mice (Izumo-/- males) were sterile despite normal mating behaviour and ejaculation, indicating the importance of the protein in fertilization. There are cysteine residues thought to form a disulphide bridge. Izumo is a typical type I membrane glycoprotein with one immunoglobulin-like domain and a putative N-glycoside link motif (Asn 204). There is a conserved GCL sequence motif. Izumo expression has been found to be testis-specific.


:

Pssm-ID: 464437  Cd Length: 142  Bit Score: 214.05  E-value: 4.48e-71
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5JKC_A          5 CVICDPSVVLALKSLEKDYLPGHLdaKHHKAMMERVENAVKDFQELSLNEDAYMGVVDEATLQKGSWSLLKDLKRITDSD 84
Cdd:pfam15005   1 CLQCDPSVVEALKSLRGDLVPSHL--PHRKQLMERQQALLLDFSFKDYALNAFLGVVDEDTLDKVAWSLKNDLKRLTDSD 78

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
5JKC_A         85 VKGDLFVKELFWMLHLQKETFATYVARFQKEAYCPNKCGVMLQTLIWCKNCKKEVHACRKSYDC 148
Cdd:pfam15005  79 LKGEPLLKELLWMRQNQKKKLKKALKEFQKEACCPNKCGVMLQPVLDCWTCQKITHKCFKGKYC 142
Izumo-Ig pfam16706
Izumo-like Immunoglobulin domain; Izumo-Ig is the immunoglobulin domain on Izumo proteins from ...
 151-238 1.20e-60

Izumo-like Immunoglobulin domain; Izumo-Ig is the immunoglobulin domain on Izumo proteins from higher eukaryotes. Izumo is a typical type I membrane glycoprotein with one immunoglobulin-like domain and a putative N-glycoside link motif - glycosylation site. The full-length protein, eg Swiss:Q8IYV9, is a molecule with a single immunoglobulin (Ig) domain. It is thought that Izumo proteins bind to putative Izumo receptors on the oocyte. Izumo is not detectable on the surface of fresh sperm but becomes exposed only after an exocytotic process, the acrosome reaction, has occurred. Studies have shown that knock-out mice (Izumo-/- males) were sterile despite normal mating behaviour and ejaculation, indicating the importance of the protein in fertilization. There is a conserved GCL sequence motif. Izumo expression has been found to be testis-specific.


:

Pssm-ID: 465242  Cd Length: 88  Bit Score: 185.75  E-value: 1.20e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5JKC_A        151 RNVEVPQMEDMILDCELNWHQASEGLTDYSFYRVWGNNTETLVSKGKEATLTKPMVGPEDAGSYRCELGSVNSSPATIIN 230
Cdd:pfam16706   1 RTVEVHEMEDLILDCELSWHRASQGLTDYSFYRVWGNSSETLLSKGKDPTLTKPMVGPEDAGTYRCELDTVNSSPATIIH 80


                  ....*...
5JKC_A        231 FHVTVLPK 238
Cdd:pfam16706  81 FHVTVLPL 88
 
Name Accession Description Interval E-value
IZUMO pfam15005
Izumo sperm-egg fusion, Ig domain-associated; This IZUMO family is a domain just upstream of ...
 5-148 4.48e-71

Izumo sperm-egg fusion, Ig domain-associated; This IZUMO family is a domain just upstream of the immunoglobulin domain on Izumo proteins in higher eukaryotes. The actual function of this region of the Izumo proteins is not known. The full-length protein is a molecule with a single immunoglobulin (Ig) domain. It is thought that Izumo proteins bind to putative Izumo receptors on the oocyte. Izumo is not detectable on the surface of fresh sperm but becomes exposed only after an exocytotic process, the acrosome reaction, has occurred. Studies have shown that knock-out mice (Izumo-/- males) were sterile despite normal mating behaviour and ejaculation, indicating the importance of the protein in fertilization. There are cysteine residues thought to form a disulphide bridge. Izumo is a typical type I membrane glycoprotein with one immunoglobulin-like domain and a putative N-glycoside link motif (Asn 204). There is a conserved GCL sequence motif. Izumo expression has been found to be testis-specific.


Pssm-ID: 464437  Cd Length: 142  Bit Score: 214.05  E-value: 4.48e-71
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5JKC_A          5 CVICDPSVVLALKSLEKDYLPGHLdaKHHKAMMERVENAVKDFQELSLNEDAYMGVVDEATLQKGSWSLLKDLKRITDSD 84
Cdd:pfam15005   1 CLQCDPSVVEALKSLRGDLVPSHL--PHRKQLMERQQALLLDFSFKDYALNAFLGVVDEDTLDKVAWSLKNDLKRLTDSD 78

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
5JKC_A         85 VKGDLFVKELFWMLHLQKETFATYVARFQKEAYCPNKCGVMLQTLIWCKNCKKEVHACRKSYDC 148
Cdd:pfam15005  79 LKGEPLLKELLWMRQNQKKKLKKALKEFQKEACCPNKCGVMLQPVLDCWTCQKITHKCFKGKYC 142
Izumo-Ig pfam16706
Izumo-like Immunoglobulin domain; Izumo-Ig is the immunoglobulin domain on Izumo proteins from ...
 151-238 1.20e-60

Izumo-like Immunoglobulin domain; Izumo-Ig is the immunoglobulin domain on Izumo proteins from higher eukaryotes. Izumo is a typical type I membrane glycoprotein with one immunoglobulin-like domain and a putative N-glycoside link motif - glycosylation site. The full-length protein, eg Swiss:Q8IYV9, is a molecule with a single immunoglobulin (Ig) domain. It is thought that Izumo proteins bind to putative Izumo receptors on the oocyte. Izumo is not detectable on the surface of fresh sperm but becomes exposed only after an exocytotic process, the acrosome reaction, has occurred. Studies have shown that knock-out mice (Izumo-/- males) were sterile despite normal mating behaviour and ejaculation, indicating the importance of the protein in fertilization. There is a conserved GCL sequence motif. Izumo expression has been found to be testis-specific.


Pssm-ID: 465242  Cd Length: 88  Bit Score: 185.75  E-value: 1.20e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5JKC_A        151 RNVEVPQMEDMILDCELNWHQASEGLTDYSFYRVWGNNTETLVSKGKEATLTKPMVGPEDAGSYRCELGSVNSSPATIIN 230
Cdd:pfam16706   1 RTVEVHEMEDLILDCELSWHRASQGLTDYSFYRVWGNSSETLLSKGKDPTLTKPMVGPEDAGTYRCELDTVNSSPATIIH 80


                  ....*...
5JKC_A        231 FHVTVLPK 238
Cdd:pfam16706  81 FHVTVLPL 88
 
Name Accession Description Interval E-value
IZUMO pfam15005
Izumo sperm-egg fusion, Ig domain-associated; This IZUMO family is a domain just upstream of ...
 5-148 4.48e-71

Izumo sperm-egg fusion, Ig domain-associated; This IZUMO family is a domain just upstream of the immunoglobulin domain on Izumo proteins in higher eukaryotes. The actual function of this region of the Izumo proteins is not known. The full-length protein is a molecule with a single immunoglobulin (Ig) domain. It is thought that Izumo proteins bind to putative Izumo receptors on the oocyte. Izumo is not detectable on the surface of fresh sperm but becomes exposed only after an exocytotic process, the acrosome reaction, has occurred. Studies have shown that knock-out mice (Izumo-/- males) were sterile despite normal mating behaviour and ejaculation, indicating the importance of the protein in fertilization. There are cysteine residues thought to form a disulphide bridge. Izumo is a typical type I membrane glycoprotein with one immunoglobulin-like domain and a putative N-glycoside link motif (Asn 204). There is a conserved GCL sequence motif. Izumo expression has been found to be testis-specific.


Pssm-ID: 464437  Cd Length: 142  Bit Score: 214.05  E-value: 4.48e-71
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5JKC_A          5 CVICDPSVVLALKSLEKDYLPGHLdaKHHKAMMERVENAVKDFQELSLNEDAYMGVVDEATLQKGSWSLLKDLKRITDSD 84
Cdd:pfam15005   1 CLQCDPSVVEALKSLRGDLVPSHL--PHRKQLMERQQALLLDFSFKDYALNAFLGVVDEDTLDKVAWSLKNDLKRLTDSD 78

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
5JKC_A         85 VKGDLFVKELFWMLHLQKETFATYVARFQKEAYCPNKCGVMLQTLIWCKNCKKEVHACRKSYDC 148
Cdd:pfam15005  79 LKGEPLLKELLWMRQNQKKKLKKALKEFQKEACCPNKCGVMLQPVLDCWTCQKITHKCFKGKYC 142
Izumo-Ig pfam16706
Izumo-like Immunoglobulin domain; Izumo-Ig is the immunoglobulin domain on Izumo proteins from ...
 151-238 1.20e-60

Izumo-like Immunoglobulin domain; Izumo-Ig is the immunoglobulin domain on Izumo proteins from higher eukaryotes. Izumo is a typical type I membrane glycoprotein with one immunoglobulin-like domain and a putative N-glycoside link motif - glycosylation site. The full-length protein, eg Swiss:Q8IYV9, is a molecule with a single immunoglobulin (Ig) domain. It is thought that Izumo proteins bind to putative Izumo receptors on the oocyte. Izumo is not detectable on the surface of fresh sperm but becomes exposed only after an exocytotic process, the acrosome reaction, has occurred. Studies have shown that knock-out mice (Izumo-/- males) were sterile despite normal mating behaviour and ejaculation, indicating the importance of the protein in fertilization. There is a conserved GCL sequence motif. Izumo expression has been found to be testis-specific.


Pssm-ID: 465242  Cd Length: 88  Bit Score: 185.75  E-value: 1.20e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5JKC_A        151 RNVEVPQMEDMILDCELNWHQASEGLTDYSFYRVWGNNTETLVSKGKEATLTKPMVGPEDAGSYRCELGSVNSSPATIIN 230
Cdd:pfam16706   1 RTVEVHEMEDLILDCELSWHRASQGLTDYSFYRVWGNSSETLLSKGKDPTLTKPMVGPEDAGTYRCELDTVNSSPATIIH 80


                  ....*...
5JKC_A        231 FHVTVLPK 238
Cdd:pfam16706  81 FHVTVLPL 88
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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