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Conserved domains on  [gi|37674436|gb|AAQ96886|]
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unknown [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
COG3416 super family cl47320
Uncharacterized conserved protein, DUF2076 domain [Function unknown];
4-93 6.76e-04

Uncharacterized conserved protein, DUF2076 domain [Function unknown];


The actual alignment was detected with superfamily member COG3416:

Pssm-ID: 442642 [Multi-domain]  Cd Length: 237  Bit Score: 38.46  E-value: 6.76e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37674436   4 GSRSRTSRMAPPASR--APQMRAAPRPAPVAQPPAAAPPSAVGSSAAAPRQPGLMAQMATTAAGVAVGSavghTLGHAIT 81
Cdd:COG3416  93 GQRPPPAPQPSQPGPqqQPAPPSGPWGQAAPQQPGYGQPQYGQPAAGPSGGGGFLGGALQTAAGVAGGV----LLANALT 168

                        90
                ....*....|..
gi 37674436  82 GGFSGGSNAEPA 93
Cdd:COG3416 169 GMFSGSHPGEGV 180
 
Name Accession Description Interval E-value
COG3416 COG3416
Uncharacterized conserved protein, DUF2076 domain [Function unknown];
4-93 6.76e-04

Uncharacterized conserved protein, DUF2076 domain [Function unknown];


Pssm-ID: 442642 [Multi-domain]  Cd Length: 237  Bit Score: 38.46  E-value: 6.76e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37674436   4 GSRSRTSRMAPPASR--APQMRAAPRPAPVAQPPAAAPPSAVGSSAAAPRQPGLMAQMATTAAGVAVGSavghTLGHAIT 81
Cdd:COG3416  93 GQRPPPAPQPSQPGPqqQPAPPSGPWGQAAPQQPGYGQPQYGQPAAGPSGGGGFLGGALQTAAGVAGGV----LLANALT 168

                        90
                ....*....|..
gi 37674436  82 GGFSGGSNAEPA 93
Cdd:COG3416 169 GMFSGSHPGEGV 180
 
Name Accession Description Interval E-value
COG3416 COG3416
Uncharacterized conserved protein, DUF2076 domain [Function unknown];
4-93 6.76e-04

Uncharacterized conserved protein, DUF2076 domain [Function unknown];


Pssm-ID: 442642 [Multi-domain]  Cd Length: 237  Bit Score: 38.46  E-value: 6.76e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37674436   4 GSRSRTSRMAPPASR--APQMRAAPRPAPVAQPPAAAPPSAVGSSAAAPRQPGLMAQMATTAAGVAVGSavghTLGHAIT 81
Cdd:COG3416  93 GQRPPPAPQPSQPGPqqQPAPPSGPWGQAAPQQPGYGQPQYGQPAAGPSGGGGFLGGALQTAAGVAGGV----LLANALT 168

                        90
                ....*....|..
gi 37674436  82 GGFSGGSNAEPA 93
Cdd:COG3416 169 GMFSGSHPGEGV 180
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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