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Conserved domains on  [gi|226515959|gb|ACO61954|]
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predicted protein [Micromonas commoda]

Protein Classification

ferredoxin-thioredoxin reductase variable chain( domain architecture ID 10502959)

ferredoxin-thioredoxin reductase variable chain is part of the enzyme complex that catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FeThRed_A pfam02941
Ferredoxin thioredoxin reductase variable alpha chain;
52-113 2.37e-19

Ferredoxin thioredoxin reductase variable alpha chain;


:

Pssm-ID: 427069  Cd Length: 67  Bit Score: 75.33  E-value: 2.37e-19
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 226515959   52 YHVPKgDRKNGTDLSGWEGVVDSRADDYNGTYISANLEVKVAFavpndpkGKTFIVHCKENE 113
Cdd:pfam02941  14 YHHPE-HRGEAFDLKGMEGEVVQIVTDWKGRPISANLPVKVQF-------PKKFKAHLREDE 67
 
Name Accession Description Interval E-value
FeThRed_A pfam02941
Ferredoxin thioredoxin reductase variable alpha chain;
52-113 2.37e-19

Ferredoxin thioredoxin reductase variable alpha chain;


Pssm-ID: 427069  Cd Length: 67  Bit Score: 75.33  E-value: 2.37e-19
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 226515959   52 YHVPKgDRKNGTDLSGWEGVVDSRADDYNGTYISANLEVKVAFavpndpkGKTFIVHCKENE 113
Cdd:pfam02941  14 YHHPE-HRGEAFDLKGMEGEVVQIVTDWKGRPISANLPVKVQF-------PKKFKAHLREDE 67
 
Name Accession Description Interval E-value
FeThRed_A pfam02941
Ferredoxin thioredoxin reductase variable alpha chain;
52-113 2.37e-19

Ferredoxin thioredoxin reductase variable alpha chain;


Pssm-ID: 427069  Cd Length: 67  Bit Score: 75.33  E-value: 2.37e-19
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 226515959   52 YHVPKgDRKNGTDLSGWEGVVDSRADDYNGTYISANLEVKVAFavpndpkGKTFIVHCKENE 113
Cdd:pfam02941  14 YHHPE-HRGEAFDLKGMEGEVVQIVTDWKGRPISANLPVKVQF-------PKKFKAHLREDE 67
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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