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Conserved domains on  [gi|2050338978|gb|KAG6764649|]
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hypothetical protein POTOM_032129 [Populus tomentosa]

Protein Classification

PLN02305 family protein( domain architecture ID 11476612)

PLN02305 family protein

Graphical summary

 Zoom to residue level

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List of domain hits

Name Accession Description Interval E-value
PLN02305 PLN02305
lipoxygenase
4-926 0e+00

lipoxygenase


:

Pssm-ID: 215174 [Multi-domain]  Cd Length: 918  Bit Score: 1851.88  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978   4 MKRVCSPFKSELTFRLTTATSRAwkdGFFWKTRFPSGSKVSctPGSIRAVISSDGKALEPSSKEASNKEVDEIVLSSSSD 83
Cdd:PLN02305    1 VASPISPNFSGVSLRASPAFSAL---GRRRRTRVPISRSPV--AGSIRAVISSEDKAVEESGGESANKSVDGSSLLPSSR 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978  84 KLGKGGIDVRAVITIRKKIKEKINEKIEDQWEYFVNGIGKGILIQLVSEEIDPETNSGKSVQASVRGWLPKPSNNEHIIE 163
Cdd:PLN02305   76 SKYAGGIDVRAVITIRKKIKEKITEKFEDQWEYFMNGIGQGILIQLVSEEIDPVTGSGKSVESSVRGWLPKPSNDPHIVE 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 164 YAADFTVPFDFGNPGAVLVANLHGKEFYLMEIVVHGFDAGPIFFPANTWIHSSKDNPDSRIIFRNQAYLPSRTPPGIKDL 243
Cdd:PLN02305  156 YAADFTVPFDFGKPGAVLVTNLHGKEFYLMEIVIHGFDDGPIFFPANTWIHSRKDNPESRIIFRNQAYLPSQTPPGIKDL 235
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 244 RREDLLSLRGNGKGERKPHDRIYDYALYNDLGNPDKDDELARPVLGGEKWPYPRRCRTGRPPTKKDPKCETRIEKPHPVY 323
Cdd:PLN02305  236 RREDLLSLRGNGKGERKPHDRIYDYAPYNDLGNPDKDEDLARPVLGGEEWPYPRRCRTGRPPTKKDPLCESRIEKPHPVY 315
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 324 VPRDETFEEIKRNTFSTGRLKALLHNLIPAIAATLSSSDIPFTCFSEIDKLYNDGFILKTEELSEIVQNPFLGNFMKRVL 403
Cdd:PLN02305  316 VPRDETFEEIKRNTFSAGRLKALLHNLIPSIAAALSSSDIPFTCFSDIDKLYNDGILLKTEEPKDIGLNPFLGNFMKQVL 395
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 404 SVSERLLIYDIPAVIKRDRFAWLRDSEFARQTLAGVNPVNIEILKEFPILSKLDPAVYGPPESAITEELIERELHGMSVE 483
Cdd:PLN02305  396 SVSERLLKYDIPAVIKRDRFAWLRDNEFARQALAGVNPVNIEILKEFPILSKLDPAVYGPPESALTEELIERELEGMTVE 475
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 484 KAIEEKRLFILDYHDMLLPFIEKMNSLPGRKAYASRTVFFYDQAGILRPIVIELSLPPSPSSPCNKHVYIHGHDATAHWI 563
Cdd:PLN02305  476 KAIEEKRLFILDYHDMLLPFIEKMNSLPERKAYASRTVFFYSKAGALRPIAIELSLPPTPSSPGNKFVYTHGHDATTHWI 555
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 564 WKLAKAHVCSNDAGVHQLVNHWLRTHACMETYLIATHRQLSAMHPIYKLLHPHTRYTLEINALARQSLINGGGIIEACFS 643
Cdd:PLN02305  556 WKLAKAHVCSNDAGVHQLVNHWLRTHACMEPYIIATHRQLSAMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEACFS 635
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 644 PGKYAMEISSAAYKNMWRFDMEALPADLVRRGMAVEDPSMPCGVRLVIEDYPYASDGLLIWSAIKEYVESYVDHFYSEPN 723
Cdd:PLN02305  636 PGKYAMELSSAAYKSMWRFDMEALPADLIRRGMAEEDPSMPCGVRLVIEDYPYAADGLLIWSAIKEWVESYVDHFYSEPN 715
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 724 SVTSDIELQAWWNEIKNKGHFDKRSEPWWPKLDTKEDVSGILTTMIWIASGQHAAINFGQYPYGGYVPSRPTLMRKLIPL 803
Cdd:PLN02305  716 SITSDLELQAWWDEIKNKGHYDKRNEPWWPKLNTKEDLSGILTTMIWIASGQHAAINFGQYPFGGYVPNRPTLMRKLIPQ 795
                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 804 ENEHDHEKFIRNPQHTFLSSLPTQLQATKIMAAQDTLSTHSPDEEYLGQVSQLHSHWINDHEIVELFNRFSARLEEIEGI 883
Cdd:PLN02305  796 ENDPDYEKFIRNPQYTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGELRHLHSHWINDHEVVKLFNKFSARLEEIEKT 875
                         890       900       910       920
                  ....*....|....*....|....*....|....*....|...
gi 2050338978 884 INLRNKDTRLKNRSGAGVPPYELLVPTSGPGVTGRGIPNSISI 926
Cdd:PLN02305  876 INERNKDIRLKNRNGAGIPPYELLLPTSGPGVTGRGIPNSISI 918
 
Name Accession Description Interval E-value
PLN02305 PLN02305
lipoxygenase
4-926 0e+00

lipoxygenase


Pssm-ID: 215174 [Multi-domain]  Cd Length: 918  Bit Score: 1851.88  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978   4 MKRVCSPFKSELTFRLTTATSRAwkdGFFWKTRFPSGSKVSctPGSIRAVISSDGKALEPSSKEASNKEVDEIVLSSSSD 83
Cdd:PLN02305    1 VASPISPNFSGVSLRASPAFSAL---GRRRRTRVPISRSPV--AGSIRAVISSEDKAVEESGGESANKSVDGSSLLPSSR 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978  84 KLGKGGIDVRAVITIRKKIKEKINEKIEDQWEYFVNGIGKGILIQLVSEEIDPETNSGKSVQASVRGWLPKPSNNEHIIE 163
Cdd:PLN02305   76 SKYAGGIDVRAVITIRKKIKEKITEKFEDQWEYFMNGIGQGILIQLVSEEIDPVTGSGKSVESSVRGWLPKPSNDPHIVE 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 164 YAADFTVPFDFGNPGAVLVANLHGKEFYLMEIVVHGFDAGPIFFPANTWIHSSKDNPDSRIIFRNQAYLPSRTPPGIKDL 243
Cdd:PLN02305  156 YAADFTVPFDFGKPGAVLVTNLHGKEFYLMEIVIHGFDDGPIFFPANTWIHSRKDNPESRIIFRNQAYLPSQTPPGIKDL 235
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 244 RREDLLSLRGNGKGERKPHDRIYDYALYNDLGNPDKDDELARPVLGGEKWPYPRRCRTGRPPTKKDPKCETRIEKPHPVY 323
Cdd:PLN02305  236 RREDLLSLRGNGKGERKPHDRIYDYAPYNDLGNPDKDEDLARPVLGGEEWPYPRRCRTGRPPTKKDPLCESRIEKPHPVY 315
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 324 VPRDETFEEIKRNTFSTGRLKALLHNLIPAIAATLSSSDIPFTCFSEIDKLYNDGFILKTEELSEIVQNPFLGNFMKRVL 403
Cdd:PLN02305  316 VPRDETFEEIKRNTFSAGRLKALLHNLIPSIAAALSSSDIPFTCFSDIDKLYNDGILLKTEEPKDIGLNPFLGNFMKQVL 395
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 404 SVSERLLIYDIPAVIKRDRFAWLRDSEFARQTLAGVNPVNIEILKEFPILSKLDPAVYGPPESAITEELIERELHGMSVE 483
Cdd:PLN02305  396 SVSERLLKYDIPAVIKRDRFAWLRDNEFARQALAGVNPVNIEILKEFPILSKLDPAVYGPPESALTEELIERELEGMTVE 475
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 484 KAIEEKRLFILDYHDMLLPFIEKMNSLPGRKAYASRTVFFYDQAGILRPIVIELSLPPSPSSPCNKHVYIHGHDATAHWI 563
Cdd:PLN02305  476 KAIEEKRLFILDYHDMLLPFIEKMNSLPERKAYASRTVFFYSKAGALRPIAIELSLPPTPSSPGNKFVYTHGHDATTHWI 555
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 564 WKLAKAHVCSNDAGVHQLVNHWLRTHACMETYLIATHRQLSAMHPIYKLLHPHTRYTLEINALARQSLINGGGIIEACFS 643
Cdd:PLN02305  556 WKLAKAHVCSNDAGVHQLVNHWLRTHACMEPYIIATHRQLSAMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEACFS 635
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 644 PGKYAMEISSAAYKNMWRFDMEALPADLVRRGMAVEDPSMPCGVRLVIEDYPYASDGLLIWSAIKEYVESYVDHFYSEPN 723
Cdd:PLN02305  636 PGKYAMELSSAAYKSMWRFDMEALPADLIRRGMAEEDPSMPCGVRLVIEDYPYAADGLLIWSAIKEWVESYVDHFYSEPN 715
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 724 SVTSDIELQAWWNEIKNKGHFDKRSEPWWPKLDTKEDVSGILTTMIWIASGQHAAINFGQYPYGGYVPSRPTLMRKLIPL 803
Cdd:PLN02305  716 SITSDLELQAWWDEIKNKGHYDKRNEPWWPKLNTKEDLSGILTTMIWIASGQHAAINFGQYPFGGYVPNRPTLMRKLIPQ 795
                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 804 ENEHDHEKFIRNPQHTFLSSLPTQLQATKIMAAQDTLSTHSPDEEYLGQVSQLHSHWINDHEIVELFNRFSARLEEIEGI 883
Cdd:PLN02305  796 ENDPDYEKFIRNPQYTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGELRHLHSHWINDHEVVKLFNKFSARLEEIEKT 875
                         890       900       910       920
                  ....*....|....*....|....*....|....*....|...
gi 2050338978 884 INLRNKDTRLKNRSGAGVPPYELLVPTSGPGVTGRGIPNSISI 926
Cdd:PLN02305  876 INERNKDIRLKNRNGAGIPPYELLLPTSGPGVTGRGIPNSISI 918
Lipoxygenase pfam00305
Lipoxygenase;
240-909 0e+00

Lipoxygenase;


Pssm-ID: 459754 [Multi-domain]  Cd Length: 672  Bit Score: 1263.56  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 240 IKDLRREDLLSLRGNGKGERKPHDRIYDYALYNDLGNPDKDDELARPVLGG-EKWPYPRRCRTGRPPTKKDPKCETRIEK 318
Cdd:pfam00305   1 LKKLREEELKNLRGNGTGERKEWDRIYDYDVYNDLGNPDKGPDLARPVLGGsKEYPYPRRCRTGRPPTKTDPKSESRSPL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 319 PHPVYVPRDETFEEIKRNTFSTGRLKALLHNLIPAIAATLSSSDIPFTCFSEIDKLYNDGFILKTEELSEIVQNPFLGNF 398
Cdd:pfam00305  81 SLDIYVPRDERFSEVKQSDFLAYTLKSVLHALIPALESLLFDKNLEFDSFEDIDKLYEEGIKLPPIPLLDELRKIIPPEL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 399 MKRVLSV--SERLLIYDIPAVIKRDRFAWLRDSEFARQTLAGVNPVNIEILKEFPILSKLDPAVYGPPESAITEELIERE 476
Cdd:pfam00305 161 LKEILRTdgNEDLLKFPTPQVIKRDKFAWLRDEEFARQTLAGLNPVSIRLLTEFPPKSKLDPEIYGPQESAITEEHIEKQ 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 477 LHGMSVEKAIEEKRLFILDYHDMLLPFIEKMNSLPGRKAYASRTVFFYDQAGILRPIVIELSL-PPSPSSPCNKHVYIHG 555
Cdd:pfam00305 241 LEGLTVEEALEQKKLFILDYHDLLLPYLNRINALEGTKLYASRTLLFLTDDGTLKPLAIELSLpPSGGKHPQWKRVFTPA 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 556 HDATAHWIWKLAKAHVCSNDAGVHQLVNHWLRTHACMETYLIATHRQLSAMHPIYKLLHPHTRYTLEINALARQSLINGG 635
Cdd:pfam00305 321 SDGTEDWLWQLAKAHVAVNDSGYHQLVSHWLRTHAVMEPFIIATNRQLSVMHPIYKLLHPHFRYTMEINALARQSLINAG 400
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 636 GIIEACFSPGKYAMEISSAAYKNMWRFDMEALPADLVRRGMAVEDPSMPCGVRLVIEDYPYASDGLLIWSAIKEYVESYV 715
Cdd:pfam00305 401 GIIESTFFPGKYSMEMSSVAYKDLWRFDEQALPADLIKRGMAVEDPSAPHGLRLLIEDYPYANDGLEIWDAIKQWVTDYV 480
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 716 DHFYSEPNSVTSDIELQAWWNEIKNKGHFDKRSEPWWPKLDTKEDVSGILTTMIWIASGQHAAINFGQYPYGGYVPSRPT 795
Cdd:pfam00305 481 NHYYPDDSAVQSDTELQAWWKEVREVGHGDKKDEPWWPKLDTKEDLIEILTTIIWIASAHHAAVNFGQYPYAGYFPNRPT 560
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 796 LMRKLIPLENEHDHEKFIRNPQHTFLSSLPTQLQATKIMAAQDTLSTHSPDEEYLGQvsQLHSHWINDHEIVELFNRFSA 875
Cdd:pfam00305 561 ISRRLMPEEGTPEYEEFLENPEKFFLSTIPSQLQATLVMAVLEILSTHSPDEEYLGQ--RDEPSWTSDPEILAAFERFSA 638
                         650       660       670
                  ....*....|....*....|....*....|....
gi 2050338978 876 RLEEIEGIINLRNKDTRLKNRSGAGVPPYELLVP 909
Cdd:pfam00305 639 KLKEIEGIIDERNKDPKLKNRCGPGVVPYELLKP 672
PLAT_LH2 cd01751
PLAT/ LH2 domain of plant lipoxygenase related proteins. Lipoxygenases are nonheme, nonsulfur ...
92-228 2.80e-33

PLAT/ LH2 domain of plant lipoxygenase related proteins. Lipoxygenases are nonheme, nonsulfur iron dioxygenases that act on lipid substrates containing one or more (Z,Z)-1,4-pentadiene moieties. In plants, the immediate products are involved in defense mechanisms against pathogens and may be precursors of metabolic regulators. The generally proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins.


Pssm-ID: 238849 [Multi-domain]  Cd Length: 137  Bit Score: 125.11  E-value: 2.80e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978  92 VRAVITIRKKIKEKINEKIEDQWEYfVNGIGKGILIQLVSEEIDPETNSGK-SVQASVRGWLPKPSNNEHiieYAADFTV 170
Cdd:cd01751     3 VKATVTVMKKNKLDLNDDGSGLDDL-DDLLGRSLLLELVSSELDPKTGKGKkGKAAFLEGWGKSLAGESA---YEAEFEV 78
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2050338978 171 PFDFGNPGAVLVANLHGKEFYLMEIVVHGF-DAGPIFFPANTWIHSSKDNPDSRIIFRN 228
Cdd:cd01751    79 PASFGPPGAVLVKNEHHSEFFLKSITLEGFgGSGTITFVCNSWVYPKKDYPDKRIFFPN 137
LH2 smart00308
Lipoxygenase homology 2 (beta barrel) domain;
119-215 5.68e-13

Lipoxygenase homology 2 (beta barrel) domain;


Pssm-ID: 214608 [Multi-domain]  Cd Length: 105  Bit Score: 65.74  E-value: 5.68e-13
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978  119 NGIGKGILIQLVSEEIDpetnSGKSVQASVRGWLPKPSNnehiiEYAADFTVPFDFGNPGAVLVANLHGK-EFYLMEIVV 197
Cdd:smart00308  15 AGTTASVSLSLVGAEGD----GKESKLDYLFKGIFARGS-----TYEFTFDVDEDFGELGAVKIKNEHRHpEWFLKSITV 85
                           90
                   ....*....|....*....
gi 2050338978  198 HGFDA-GPIFFPANTWIHS 215
Cdd:smart00308  86 KDLPTgGKYHFPCNSWVYP 104
 
Name Accession Description Interval E-value
PLN02305 PLN02305
lipoxygenase
4-926 0e+00

lipoxygenase


Pssm-ID: 215174 [Multi-domain]  Cd Length: 918  Bit Score: 1851.88  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978   4 MKRVCSPFKSELTFRLTTATSRAwkdGFFWKTRFPSGSKVSctPGSIRAVISSDGKALEPSSKEASNKEVDEIVLSSSSD 83
Cdd:PLN02305    1 VASPISPNFSGVSLRASPAFSAL---GRRRRTRVPISRSPV--AGSIRAVISSEDKAVEESGGESANKSVDGSSLLPSSR 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978  84 KLGKGGIDVRAVITIRKKIKEKINEKIEDQWEYFVNGIGKGILIQLVSEEIDPETNSGKSVQASVRGWLPKPSNNEHIIE 163
Cdd:PLN02305   76 SKYAGGIDVRAVITIRKKIKEKITEKFEDQWEYFMNGIGQGILIQLVSEEIDPVTGSGKSVESSVRGWLPKPSNDPHIVE 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 164 YAADFTVPFDFGNPGAVLVANLHGKEFYLMEIVVHGFDAGPIFFPANTWIHSSKDNPDSRIIFRNQAYLPSRTPPGIKDL 243
Cdd:PLN02305  156 YAADFTVPFDFGKPGAVLVTNLHGKEFYLMEIVIHGFDDGPIFFPANTWIHSRKDNPESRIIFRNQAYLPSQTPPGIKDL 235
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 244 RREDLLSLRGNGKGERKPHDRIYDYALYNDLGNPDKDDELARPVLGGEKWPYPRRCRTGRPPTKKDPKCETRIEKPHPVY 323
Cdd:PLN02305  236 RREDLLSLRGNGKGERKPHDRIYDYAPYNDLGNPDKDEDLARPVLGGEEWPYPRRCRTGRPPTKKDPLCESRIEKPHPVY 315
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 324 VPRDETFEEIKRNTFSTGRLKALLHNLIPAIAATLSSSDIPFTCFSEIDKLYNDGFILKTEELSEIVQNPFLGNFMKRVL 403
Cdd:PLN02305  316 VPRDETFEEIKRNTFSAGRLKALLHNLIPSIAAALSSSDIPFTCFSDIDKLYNDGILLKTEEPKDIGLNPFLGNFMKQVL 395
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 404 SVSERLLIYDIPAVIKRDRFAWLRDSEFARQTLAGVNPVNIEILKEFPILSKLDPAVYGPPESAITEELIERELHGMSVE 483
Cdd:PLN02305  396 SVSERLLKYDIPAVIKRDRFAWLRDNEFARQALAGVNPVNIEILKEFPILSKLDPAVYGPPESALTEELIERELEGMTVE 475
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 484 KAIEEKRLFILDYHDMLLPFIEKMNSLPGRKAYASRTVFFYDQAGILRPIVIELSLPPSPSSPCNKHVYIHGHDATAHWI 563
Cdd:PLN02305  476 KAIEEKRLFILDYHDMLLPFIEKMNSLPERKAYASRTVFFYSKAGALRPIAIELSLPPTPSSPGNKFVYTHGHDATTHWI 555
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 564 WKLAKAHVCSNDAGVHQLVNHWLRTHACMETYLIATHRQLSAMHPIYKLLHPHTRYTLEINALARQSLINGGGIIEACFS 643
Cdd:PLN02305  556 WKLAKAHVCSNDAGVHQLVNHWLRTHACMEPYIIATHRQLSAMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEACFS 635
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 644 PGKYAMEISSAAYKNMWRFDMEALPADLVRRGMAVEDPSMPCGVRLVIEDYPYASDGLLIWSAIKEYVESYVDHFYSEPN 723
Cdd:PLN02305  636 PGKYAMELSSAAYKSMWRFDMEALPADLIRRGMAEEDPSMPCGVRLVIEDYPYAADGLLIWSAIKEWVESYVDHFYSEPN 715
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 724 SVTSDIELQAWWNEIKNKGHFDKRSEPWWPKLDTKEDVSGILTTMIWIASGQHAAINFGQYPYGGYVPSRPTLMRKLIPL 803
Cdd:PLN02305  716 SITSDLELQAWWDEIKNKGHYDKRNEPWWPKLNTKEDLSGILTTMIWIASGQHAAINFGQYPFGGYVPNRPTLMRKLIPQ 795
                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 804 ENEHDHEKFIRNPQHTFLSSLPTQLQATKIMAAQDTLSTHSPDEEYLGQVSQLHSHWINDHEIVELFNRFSARLEEIEGI 883
Cdd:PLN02305  796 ENDPDYEKFIRNPQYTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGELRHLHSHWINDHEVVKLFNKFSARLEEIEKT 875
                         890       900       910       920
                  ....*....|....*....|....*....|....*....|...
gi 2050338978 884 INLRNKDTRLKNRSGAGVPPYELLVPTSGPGVTGRGIPNSISI 926
Cdd:PLN02305  876 INERNKDIRLKNRNGAGIPPYELLLPTSGPGVTGRGIPNSISI 918
Lipoxygenase pfam00305
Lipoxygenase;
240-909 0e+00

Lipoxygenase;


Pssm-ID: 459754 [Multi-domain]  Cd Length: 672  Bit Score: 1263.56  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 240 IKDLRREDLLSLRGNGKGERKPHDRIYDYALYNDLGNPDKDDELARPVLGG-EKWPYPRRCRTGRPPTKKDPKCETRIEK 318
Cdd:pfam00305   1 LKKLREEELKNLRGNGTGERKEWDRIYDYDVYNDLGNPDKGPDLARPVLGGsKEYPYPRRCRTGRPPTKTDPKSESRSPL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 319 PHPVYVPRDETFEEIKRNTFSTGRLKALLHNLIPAIAATLSSSDIPFTCFSEIDKLYNDGFILKTEELSEIVQNPFLGNF 398
Cdd:pfam00305  81 SLDIYVPRDERFSEVKQSDFLAYTLKSVLHALIPALESLLFDKNLEFDSFEDIDKLYEEGIKLPPIPLLDELRKIIPPEL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 399 MKRVLSV--SERLLIYDIPAVIKRDRFAWLRDSEFARQTLAGVNPVNIEILKEFPILSKLDPAVYGPPESAITEELIERE 476
Cdd:pfam00305 161 LKEILRTdgNEDLLKFPTPQVIKRDKFAWLRDEEFARQTLAGLNPVSIRLLTEFPPKSKLDPEIYGPQESAITEEHIEKQ 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 477 LHGMSVEKAIEEKRLFILDYHDMLLPFIEKMNSLPGRKAYASRTVFFYDQAGILRPIVIELSL-PPSPSSPCNKHVYIHG 555
Cdd:pfam00305 241 LEGLTVEEALEQKKLFILDYHDLLLPYLNRINALEGTKLYASRTLLFLTDDGTLKPLAIELSLpPSGGKHPQWKRVFTPA 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 556 HDATAHWIWKLAKAHVCSNDAGVHQLVNHWLRTHACMETYLIATHRQLSAMHPIYKLLHPHTRYTLEINALARQSLINGG 635
Cdd:pfam00305 321 SDGTEDWLWQLAKAHVAVNDSGYHQLVSHWLRTHAVMEPFIIATNRQLSVMHPIYKLLHPHFRYTMEINALARQSLINAG 400
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 636 GIIEACFSPGKYAMEISSAAYKNMWRFDMEALPADLVRRGMAVEDPSMPCGVRLVIEDYPYASDGLLIWSAIKEYVESYV 715
Cdd:pfam00305 401 GIIESTFFPGKYSMEMSSVAYKDLWRFDEQALPADLIKRGMAVEDPSAPHGLRLLIEDYPYANDGLEIWDAIKQWVTDYV 480
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 716 DHFYSEPNSVTSDIELQAWWNEIKNKGHFDKRSEPWWPKLDTKEDVSGILTTMIWIASGQHAAINFGQYPYGGYVPSRPT 795
Cdd:pfam00305 481 NHYYPDDSAVQSDTELQAWWKEVREVGHGDKKDEPWWPKLDTKEDLIEILTTIIWIASAHHAAVNFGQYPYAGYFPNRPT 560
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 796 LMRKLIPLENEHDHEKFIRNPQHTFLSSLPTQLQATKIMAAQDTLSTHSPDEEYLGQvsQLHSHWINDHEIVELFNRFSA 875
Cdd:pfam00305 561 ISRRLMPEEGTPEYEEFLENPEKFFLSTIPSQLQATLVMAVLEILSTHSPDEEYLGQ--RDEPSWTSDPEILAAFERFSA 638
                         650       660       670
                  ....*....|....*....|....*....|....
gi 2050338978 876 RLEEIEGIINLRNKDTRLKNRSGAGVPPYELLVP 909
Cdd:pfam00305 639 KLKEIEGIIDERNKDPKLKNRCGPGVVPYELLKP 672
PLN02264 PLN02264
lipoxygenase
92-926 0e+00

lipoxygenase


Pssm-ID: 215148 [Multi-domain]  Cd Length: 919  Bit Score: 1132.34  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978  92 VRAVITIRKKIKEKINEKIEDQWEYFVNGIGKGILIQLVSEEIDPETNSGK-SVQASVRGWLPKPSNNEHIIEYAADFTV 170
Cdd:PLN02264   87 VRAVVTVRNKNKEDLKETLVKHLDAFTDKIGRNVVLELISTQVDPKTKEPKkSKAAVLKDWSKKSNIKAERVHYTAEFTV 166
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 171 PFDFGNPGAVLVANLHGKEFYLMEIVVHGFDAGPIFFPANTWIHSSKDNPDSRIIFRNQAYLPSRTPPGIKDLRREDLLS 250
Cdd:PLN02264  167 DSAFGSPGAITVTNKHQKEFFLESITIEGFACGPVHFPCNSWVQSQKDHPGKRIFFTNQPYLPSETPAGLRALREKELRN 246
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 251 LRGNGKGERKPHDRIYDYALYNDLGNPDKDDELARPVLGGEKWPYPRRCRTGRPPTKKDPKCETRIEKPHPVYVPRDETF 330
Cdd:PLN02264  247 LRGDGKGVRKLSDRIYDFDVYNDLGNPDKSRELARPTLGGKKIPYPRRCRTGRLPTDSDMMAESRVEKPLPMYVPRDEQF 326
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 331 EEIKRNTFSTGRLKALLHNLIPAIAATLSSSDipFTCFSEIDKLYNDGFILKTEELSEIVQNPFLGNFMKRVLSVSERLL 410
Cdd:PLN02264  327 EESKQDTFAAGRLKAVLHNLIPSLKASILAED--FANFGEIDSLYKEGLLLKLGFQDDIFKKFPLPKVVTTLQESSEGLL 404
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 411 IYDIPAVIKRDRFAWLRDSEFARQTLAGVNPVNIEILKEFPILSKLDPAVYGPPESAITEELIERELHGMSVEKAIEEKR 490
Cdd:PLN02264  405 KYDTPKILSKDKFAWLRDDEFARQAIAGINPVNIERVKVFPPVSNLDPEIYGPQHSALTEDHIIGHLDGLSVQQALEENR 484
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 491 LFILDYHDMLLPFIEKMNSLPGRKAYASRTVFFYDQAGILRPIVIELSLPPSPSSPCNKHVYIHGHDATAHWIWKLAKAH 570
Cdd:PLN02264  485 LFMVDYHDIYLPFLDRINALDGRKAYATRTIFFLTRLGTLKPIAIELSLPPSGPNSRSKRVVTPPVDATSNWMWQLAKAH 564
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 571 VCSNDAGVHQLVNHWLRTHACMETYLIATHRQLSAMHPIYKLLHPHTRYTLEINALARQSLINGGGIIEACFSPGKYAME 650
Cdd:PLN02264  565 VCSNDAGVHQLVNHWLRTHACLEPFILAAHRQLSAMHPIFKLLDPHMRYTLEINALARQTLISADGVIESCFTAGQYGME 644
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 651 ISSAAYKNMWRFDMEALPADLVRRGMAVEDPSMPCGVRLVIEDYPYASDGLLIWSAIKEYVESYVDHFYSEPNSVTSDIE 730
Cdd:PLN02264  645 ISAAAYKNSWRFDMEGLPADLIRRGMAVPDPTQPHGLKLLIEDYPYANDGLLLWSAIQTWVRTYVERYYPDPSLICTDKE 724
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 731 LQAWWNEIKNKGHFDKRSEPWWPKLDTKEDVSGILTTMIWIASGQHAAINFGQYPYGGYVPSRPTLMRKLIPLENEHDHE 810
Cdd:PLN02264  725 LQAWYSESINVGHADLRDADWWPKLSTVDDLVSILTTLIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLIPDESDPEYA 804
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 811 KFIRNPQHTFLSSLPTQLQATKIMAAQDTLSTHSPDEEYLGQVSQlHSHWINDHEIVELFNRFSARLEEIEGIINLRNKD 890
Cdd:PLN02264  805 SFLADPQKYYFSSMPSLLQTTKFMAVVDTLSTHSPDEEYIGERQQ-PSIWTGDAEIVEAFYGFSAEIGRIEKEIEKRNAD 883
                         810       820       830
                  ....*....|....*....|....*....|....*.
gi 2050338978 891 TRLKNRSGAGVPPYELLVPTSGPGVTGRGIPNSISI 926
Cdd:PLN02264  884 PSRRNRCGAGVLPYELLAPSSEPGVTCRGVPNSVSI 919
PLN02337 PLN02337
lipoxygenase
122-926 0e+00

lipoxygenase


Pssm-ID: 215193 [Multi-domain]  Cd Length: 866  Bit Score: 907.90  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 122 GKGILIQLVSEEI-DPET-NSGK-SVQASVRGWLPKPSnneHIIEYAADFTVPFD----FGNPGAVLVANLHGKEFYLME 194
Cdd:PLN02337   51 GKGVSLQLISSTVvDPENgLRGKlGKEAYLEKWITTIT---SLTAGESAFKVTFDwdekIGVPGAFIIKNNHHSEFYLKT 127
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 195 IVVHGF-DAGPIFFPANTWIHSSKDNPDSRIIFRNQAYLPSRTPPGIKDLRREDLLSLRGNGKGERKPHDRIYDYALYND 273
Cdd:PLN02337  128 VTLEDVpGHGRVHFVCNSWIYPAKRYRYDRVFFSNKTYLPSQTPAPLRPYREEELVNLRGDGKGELKEWDRVYDYDYYND 207
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 274 LGNPDKDDELARPVLGG-EKWPYPRRCRTGRPPTKKDPKCETRIEKPH-PVYVPRDETFEEIKRNTFSTGRLKALLHNLI 351
Cdd:PLN02337  208 LGDPDKGNPYARPVLGGsQEYPYPRRGRTGRKPTKTDPNSESRLPLLSlNIYVPRDERFGHLKMSDFLAYALKAIAQVLV 287
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 352 PAIAATLSSSDIPFTCFSEIDKLYNDGFILKTEELSEIVQNPFLGNFMKRVLSV-SERLLIYDIPAVIKRDRFAWLRDSE 430
Cdd:PLN02337  288 PELEALFDKTPNEFDSFEDVLKLYEGGIKLPNGPLLEELRKNIPLEMLKELLRTdGEYLLKFPMPQVIKEDKSAWRTDEE 367
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 431 FARQTLAGVNPVNIEILKEFPILSKLDPAVYGPPESAITEELIERELHGMSVEKAIEEKRLFILDYHDMLLPFIEKMNSL 510
Cdd:PLN02337  368 FAREMLAGVNPVVIRRLTEFPPKSKLDPKKYGDQNSSITEEHIEKNLEGLTVQEALEKNRLFILDHHDALMPYLRRINST 447
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 511 PGrKAYASRTVFFYDQAGILRPIVIELS--LPPSPSSPCNKHVYIHGHDATAHWIWKLAKAHVCSNDAGVHQLVNHWLRT 588
Cdd:PLN02337  448 ST-KTYATRTLLFLKDDGTLKPLAIELSlpHPQGDKFGAVSKVYTPAEDGVEGSVWQLAKAYVAVNDSGYHQLISHWLNT 526
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 589 HACMETYLIATHRQLSAMHPIYKLLHPHTRYTLEINALARQSLINGGGIIEACFSPGKYAMEISSAAYKNmWRFDMEALP 668
Cdd:PLN02337  527 HAVIEPFVIATNRQLSVLHPIHKLLHPHFRDTMNINALARQILINAGGILESTVFPGKYALEMSSVVYKN-WNFTEQALP 605
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 669 ADLVRRGMAVEDPSMPCGVRLVIEDYPYASDGLLIWSAIKEYVESYVDHFYSEPNSVTSDIELQAWWNEIKNKGHFDKRS 748
Cdd:PLN02337  606 ADLIKRGVAVEDPSSPHGVRLLIEDYPYAVDGLEIWSAIETWVKEYCAFYYPTDDMVQGDTELQSWWKEVREEGHGDLKD 685
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 749 EPWWPKLDTKEDVSGILTTMIWIASGQHAAINFGQYPYGGYVPSRPTLMRKLIPLENEHDHEKFIRNPQHTFLSSLPTQL 828
Cdd:PLN02337  686 EPWWPKMQTVAELIESCTIIIWIASALHAAVNFGQYPYAGYLPNRPTVSRRFMPEPGTPEYEELEKNPDKAFLKTITAQL 765
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 829 QATKIMAAQDTLSTHSPDEEYLGQVSQLhsHWINDHEIVELFNRFSARLEEIEGIINLRNKDTRLKNRSGAGVPPYELLV 908
Cdd:PLN02337  766 QTLLGISLIEILSRHSSDEVYLGQRDTP--EWTSDAEPLEAFKRFGERLVEIENRIVDMNKDPRLKNRVGPVKMPYTLLY 843
                         810       820
                  ....*....|....*....|...
gi 2050338978 909 PTSGP-----GVTGRGIPNSISI 926
Cdd:PLN02337  844 PNTSDytgegGLTGKGIPNSVSI 866
PLAT_LH2 cd01751
PLAT/ LH2 domain of plant lipoxygenase related proteins. Lipoxygenases are nonheme, nonsulfur ...
92-228 2.80e-33

PLAT/ LH2 domain of plant lipoxygenase related proteins. Lipoxygenases are nonheme, nonsulfur iron dioxygenases that act on lipid substrates containing one or more (Z,Z)-1,4-pentadiene moieties. In plants, the immediate products are involved in defense mechanisms against pathogens and may be precursors of metabolic regulators. The generally proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins.


Pssm-ID: 238849 [Multi-domain]  Cd Length: 137  Bit Score: 125.11  E-value: 2.80e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978  92 VRAVITIRKKIKEKINEKIEDQWEYfVNGIGKGILIQLVSEEIDPETNSGK-SVQASVRGWLPKPSNNEHiieYAADFTV 170
Cdd:cd01751     3 VKATVTVMKKNKLDLNDDGSGLDDL-DDLLGRSLLLELVSSELDPKTGKGKkGKAAFLEGWGKSLAGESA---YEAEFEV 78
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2050338978 171 PFDFGNPGAVLVANLHGKEFYLMEIVVHGF-DAGPIFFPANTWIHSSKDNPDSRIIFRN 228
Cdd:cd01751    79 PASFGPPGAVLVKNEHHSEFFLKSITLEGFgGSGTITFVCNSWVYPKKDYPDKRIFFPN 137
LH2 smart00308
Lipoxygenase homology 2 (beta barrel) domain;
119-215 5.68e-13

Lipoxygenase homology 2 (beta barrel) domain;


Pssm-ID: 214608 [Multi-domain]  Cd Length: 105  Bit Score: 65.74  E-value: 5.68e-13
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978  119 NGIGKGILIQLVSEEIDpetnSGKSVQASVRGWLPKPSNnehiiEYAADFTVPFDFGNPGAVLVANLHGK-EFYLMEIVV 197
Cdd:smart00308  15 AGTTASVSLSLVGAEGD----GKESKLDYLFKGIFARGS-----TYEFTFDVDEDFGELGAVKIKNEHRHpEWFLKSITV 85
                           90
                   ....*....|....*....
gi 2050338978  198 HGFDA-GPIFFPANTWIHS 215
Cdd:smart00308  86 KDLPTgGKYHFPCNSWVYP 104
PLAT pfam01477
PLAT/LH2 domain; This domain is found in a variety of membrane or lipid associated proteins. ...
137-226 2.55e-08

PLAT/LH2 domain; This domain is found in a variety of membrane or lipid associated proteins. It is called the PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology) domain. The known structure of pancreatic lipase shows this domain binds to procolipase pfam01114, which mediates membrane association. So it appears possible that this domain mediates membrane attachment via other protein binding partners. The structure of this domain is known for many members of the family and is composed of a beta sandwich.


Pssm-ID: 396180  Cd Length: 115  Bit Score: 52.82  E-value: 2.55e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2050338978 137 ETNSGKSVQASvrGWLPKPS---NNEHiieyaaDFTVPFDFgNPGAVLVANLH------GKEFYLMEIVVH--GFDAGPI 205
Cdd:pfam01477  24 YGKVGESAQLE--ITLDNPDferGAED------SFEIDTDW-DVGAILKINLHwdnnglSDEWFLKSITVEvpGETGGKY 94
                          90       100
                  ....*....|....*....|.
gi 2050338978 206 FFPANTWIHSSKDNPDSRIIF 226
Cdd:pfam01477  95 TFPCNSWVYGSKKYKETRVFF 115
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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