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Conserved domains on  [gi|2459607100|gb|KAJ6892964|]
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calcium-transporting ATPase 9 plasma membrane-type protein [Populus alba x Populus x berolinensis]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
MgtA super family cl43151
Magnesium-transporting ATPase (P-type) [Inorganic ion transport and metabolism];
20-73 1.87e-06

Magnesium-transporting ATPase (P-type) [Inorganic ion transport and metabolism];


The actual alignment was detected with superfamily member COG0474:

Pssm-ID: 440242 [Multi-domain]  Cd Length: 874  Bit Score: 45.87  E-value: 1.87e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2459607100  20 INVFK-GVTKNRLFMGIVGFTIILQIILI--EFTGDFTTTVRLNWKQWLICVAFGIV 73
Cdd:COG0474   801 RSFFKsGLFPNRPLLLAVLLSLLLQLLLIyvPPLQALFGTVPLPLSDWLLILGLALL 857
 
Name Accession Description Interval E-value
MgtA COG0474
Magnesium-transporting ATPase (P-type) [Inorganic ion transport and metabolism];
20-73 1.87e-06

Magnesium-transporting ATPase (P-type) [Inorganic ion transport and metabolism];


Pssm-ID: 440242 [Multi-domain]  Cd Length: 874  Bit Score: 45.87  E-value: 1.87e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2459607100  20 INVFK-GVTKNRLFMGIVGFTIILQIILI--EFTGDFTTTVRLNWKQWLICVAFGIV 73
Cdd:COG0474   801 RSFFKsGLFPNRPLLLAVLLSLLLQLLLIyvPPLQALFGTVPLPLSDWLLILGLALL 857
Cation_ATPase_C pfam00689
Cation transporting ATPase, C-terminus; Members of this families are involved in Na+/K+, H+/K+, ...
 1-73 2.47e-06

Cation transporting ATPase, C-terminus; Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. This family represents 5 transmembrane helices.


Pssm-ID: 376368 [Multi-domain]  Cd Length: 175  Bit Score: 44.54  E-value: 2.47e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2459607100   1 MHLFSVKFSMSSMLekpdqinvFKGVTKNRLFMGIVGFTIILQIILIE--FTGDFTTTVRLNWKQWLICVAFGIV 73
Cdd:pfam00689  98 FNALNARSLRRSLF--------KIGLFSNKLLLLAILLSLLLQLLIIYvpPLQAVFGTTPLSLEQWLIVLLLALV 164
 
Name Accession Description Interval E-value
MgtA COG0474
Magnesium-transporting ATPase (P-type) [Inorganic ion transport and metabolism];
20-73 1.87e-06

Magnesium-transporting ATPase (P-type) [Inorganic ion transport and metabolism];


Pssm-ID: 440242 [Multi-domain]  Cd Length: 874  Bit Score: 45.87  E-value: 1.87e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2459607100  20 INVFK-GVTKNRLFMGIVGFTIILQIILI--EFTGDFTTTVRLNWKQWLICVAFGIV 73
Cdd:COG0474   801 RSFFKsGLFPNRPLLLAVLLSLLLQLLLIyvPPLQALFGTVPLPLSDWLLILGLALL 857
Cation_ATPase_C pfam00689
Cation transporting ATPase, C-terminus; Members of this families are involved in Na+/K+, H+/K+, ...
 1-73 2.47e-06

Cation transporting ATPase, C-terminus; Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. This family represents 5 transmembrane helices.


Pssm-ID: 376368 [Multi-domain]  Cd Length: 175  Bit Score: 44.54  E-value: 2.47e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2459607100   1 MHLFSVKFSMSSMLekpdqinvFKGVTKNRLFMGIVGFTIILQIILIE--FTGDFTTTVRLNWKQWLICVAFGIV 73
Cdd:pfam00689  98 FNALNARSLRRSLF--------KIGLFSNKLLLLAILLSLLLQLLIIYvpPLQAVFGTTPLSLEQWLIVLLLALV 164
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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