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Conserved domains on  [gi|20806119|ref|NP_620785|]
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cystatin-11 precursor [Rattus norvegicus]

Protein Classification

cystatin family protein( domain architecture ID 11249387)

cystatin family protein similar to cystatins which are a family of cysteine protease inhibitors

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CY smart00043
Cystatin-like domain; Cystatins are a family of cysteine protease inhibitors that occur mainly ...
 34-136 6.56e-17

Cystatin-like domain; Cystatins are a family of cysteine protease inhibitors that occur mainly as single domain proteins. However some extracellular proteins such as kininogen, His-rich glycoprotein and fetuin also contain these domains.


:

Pssm-ID: 214484  Cd Length: 107  Bit Score: 70.92  E-value: 6.56e-17
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20806119     34 VEEVNALESSVKETLEYVTEEYNKKSEDLYNFRILRILKIEKQMTNHMEFHITVEMQRTTCLKTEKNL--CNVQEGelhK 111
Cdd:smart00043   6 PSDVPPNDPEVQEAADFAVAEYNKKSNDKYELRVIKVVSAKSQVVAGTNYYLKVEVGETNCKKLSVDLenCPFLDQ---G 82

                           90       100
                   ....*....|....*....|....*
gi 20806119    112 QIQCYFSVYVIPWLEVFKMLKKNCT 136
Cdd:smart00043  83 EKFCTAKVWEKPWENKIKLVEFKCT 107
 
Name Accession Description Interval E-value
CY smart00043
Cystatin-like domain; Cystatins are a family of cysteine protease inhibitors that occur mainly ...
 34-136 6.56e-17

Cystatin-like domain; Cystatins are a family of cysteine protease inhibitors that occur mainly as single domain proteins. However some extracellular proteins such as kininogen, His-rich glycoprotein and fetuin also contain these domains.


Pssm-ID: 214484  Cd Length: 107  Bit Score: 70.92  E-value: 6.56e-17
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20806119     34 VEEVNALESSVKETLEYVTEEYNKKSEDLYNFRILRILKIEKQMTNHMEFHITVEMQRTTCLKTEKNL--CNVQEGelhK 111
Cdd:smart00043   6 PSDVPPNDPEVQEAADFAVAEYNKKSNDKYELRVIKVVSAKSQVVAGTNYYLKVEVGETNCKKLSVDLenCPFLDQ---G 82

                           90       100
                   ....*....|....*....|....*
gi 20806119    112 QIQCYFSVYVIPWLEVFKMLKKNCT 136
Cdd:smart00043  83 EKFCTAKVWEKPWENKIKLVEFKCT 107
CY cd00042
Cystatin-like domain; Cystatins are a family of cysteine protease inhibitors that occur mainly ...
 34-135 2.97e-13

Cystatin-like domain; Cystatins are a family of cysteine protease inhibitors that occur mainly as single domain proteins. However some extracellular proteins such as kininogen, His-rich glycoprotein and fetuin also contain these domains.


Pssm-ID: 238002 [Multi-domain]  Cd Length: 105  Bit Score: 61.34  E-value: 2.97e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20806119  34 VEEVNALESSVKETLEYVTEEYNKKSEDLYnFRILRILKIEKQMTNHMEFHITVEMQRTTCLKTEKNL--CNVQEGELHK 111
Cdd:cd00042   3 PSDIPANDPEVQELADFAVAEYNKKSNDKY-LEFFKVLSAKSQVVAGTNYYITVEAGDTNCKKSSVPLdcPDCKLLEEGK 81

                        90       100
                ....*....|....*....|....
gi 20806119 112 QIQCYFSVYVIPWLEVFKMLKKNC 135
Cdd:cd00042  82 KKFCTAKVWEKPWENFKELLSFKC 105
Cystatin pfam00031
Cystatin domain; Very diverse family. Attempts to define separate sub-families failed. ...
 34-124 5.77e-11

Cystatin domain; Very diverse family. Attempts to define separate sub-families failed. Typically, either the N-terminal or C-terminal end is very divergent. But splitting into two domains would make very short families. pfam00666 is related to this family but has not been included.


Pssm-ID: 425431  Cd Length: 92  Bit Score: 55.03  E-value: 5.77e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20806119    34 VEEVNALESSVKETLEYVTEEYNKKSeDLYNFRILRILKIEKQMTNHMEFHITVEMQRTTCLKTEKNL--CNVQEGELHK 111
Cdd:pfam00031   3 LSPIPDNSPELQEALDFALAEYNAKT-DNYYFELVEVKRAKSQVVAGTNYFIKVEVGETDCSKSKKLLedCPLLDEKWLG 81

                          90
                  ....*....|...
gi 20806119   112 qiQCYFSVYVIPW 124
Cdd:pfam00031  82 --LCSAQVYKVPW 92
 
Name Accession Description Interval E-value
CY smart00043
Cystatin-like domain; Cystatins are a family of cysteine protease inhibitors that occur mainly ...
 34-136 6.56e-17

Cystatin-like domain; Cystatins are a family of cysteine protease inhibitors that occur mainly as single domain proteins. However some extracellular proteins such as kininogen, His-rich glycoprotein and fetuin also contain these domains.


Pssm-ID: 214484  Cd Length: 107  Bit Score: 70.92  E-value: 6.56e-17
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20806119     34 VEEVNALESSVKETLEYVTEEYNKKSEDLYNFRILRILKIEKQMTNHMEFHITVEMQRTTCLKTEKNL--CNVQEGelhK 111
Cdd:smart00043   6 PSDVPPNDPEVQEAADFAVAEYNKKSNDKYELRVIKVVSAKSQVVAGTNYYLKVEVGETNCKKLSVDLenCPFLDQ---G 82

                           90       100
                   ....*....|....*....|....*
gi 20806119    112 QIQCYFSVYVIPWLEVFKMLKKNCT 136
Cdd:smart00043  83 EKFCTAKVWEKPWENKIKLVEFKCT 107
CY cd00042
Cystatin-like domain; Cystatins are a family of cysteine protease inhibitors that occur mainly ...
 34-135 2.97e-13

Cystatin-like domain; Cystatins are a family of cysteine protease inhibitors that occur mainly as single domain proteins. However some extracellular proteins such as kininogen, His-rich glycoprotein and fetuin also contain these domains.


Pssm-ID: 238002 [Multi-domain]  Cd Length: 105  Bit Score: 61.34  E-value: 2.97e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20806119  34 VEEVNALESSVKETLEYVTEEYNKKSEDLYnFRILRILKIEKQMTNHMEFHITVEMQRTTCLKTEKNL--CNVQEGELHK 111
Cdd:cd00042   3 PSDIPANDPEVQELADFAVAEYNKKSNDKY-LEFFKVLSAKSQVVAGTNYYITVEAGDTNCKKSSVPLdcPDCKLLEEGK 81

                        90       100
                ....*....|....*....|....
gi 20806119 112 QIQCYFSVYVIPWLEVFKMLKKNC 135
Cdd:cd00042  82 KKFCTAKVWEKPWENFKELLSFKC 105
Cystatin pfam00031
Cystatin domain; Very diverse family. Attempts to define separate sub-families failed. ...
 34-124 5.77e-11

Cystatin domain; Very diverse family. Attempts to define separate sub-families failed. Typically, either the N-terminal or C-terminal end is very divergent. But splitting into two domains would make very short families. pfam00666 is related to this family but has not been included.


Pssm-ID: 425431  Cd Length: 92  Bit Score: 55.03  E-value: 5.77e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20806119    34 VEEVNALESSVKETLEYVTEEYNKKSeDLYNFRILRILKIEKQMTNHMEFHITVEMQRTTCLKTEKNL--CNVQEGELHK 111
Cdd:pfam00031   3 LSPIPDNSPELQEALDFALAEYNAKT-DNYYFELVEVKRAKSQVVAGTNYFIKVEVGETDCSKSKKLLedCPLLDEKWLG 81

                          90
                  ....*....|...
gi 20806119   112 qiQCYFSVYVIPW 124
Cdd:pfam00031  82 --LCSAQVYKVPW 92
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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