|
Name |
Accession |
Description |
Interval |
E-value |
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
17-510 |
0e+00 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 820.79 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 17 IFMKAFHLLLFNGSFIFPECILIFGLILLLMIDLTSDQKDRPWFYFISSTSLVISITALLFRWREEPIISFSGNFQTNNF 96
Cdd:CHL00049 1 IFMKAFHLLLFDGSFIFPECILIFGLILLLMIDLTSDQKDIPWLYFISSTSLVMSITALLFQWREEPMISFSGNFQTNNF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 97 NEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECFSLCSYLLSGYTKRDLRS 176
Cdd:CHL00049 81 NEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTKKDVRS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 177 NEATMKYLLMGGASSSILVYGFSWLYGLSGGEIELQEIVNGLINTQMYNSPGISIALIFITVGLGFKLSLAPFHQWTPDV 256
Cdd:CHL00049 161 NEATMKYLLMGGASSSILVYGFSWLYGLSGGEIELQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSLAPFHQWTPDV 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 257 YEGSPTPVVAFLSVTSKVAALALATRILDIPFYFSSNEWHLLLEILAILSMILGNLLAITQTSMKRMLAYSSIGQIGYVI 336
Cdd:CHL00049 241 YEGSPTPVVAFLSVTSKVAASALATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 337 IGIIVGDSNDGYASMITYMLFYISMNLGTFACIVLFGLRTGTDNIRDYAGLYMKDPFLALSLALCLLSLGGLPPLAGFFG 416
Cdd:CHL00049 321 IGIIVGDSNDGYASMITYMLFYIFMNLGTFACIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFG 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 417 KLYLFWCGWQAGLYFLVSIGLLTSVLSIYYYLKIIKLLMTGRNQEITPYVRNYRRSPLRSNNSIELSMTVCVIASTILGI 496
Cdd:CHL00049 401 KLYLFWCGWQAGLYFLVSIGLLTSVISIYYYLKIIKLLMTGRNQEITPYVRNYRRSPLRSNNSIELSMIVCVIASTIPGI 480
|
490
....*....|....
gi 288558932 497 SMNPILAIAQDTLF 510
Cdd:CHL00049 481 SMNPIIAIAQDTLF 494
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
28-509 |
1.17e-171 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 493.80 E-value: 1.17e-171
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 28 NGSFIFPECILIFGLILLLMIDLTSDQKDRPWFYFISSTSLVISITALLFRWREEPIISFSGNFQTNNFNEIFQFLILLC 107
Cdd:PRK02504 11 NAGAILPEGIVILTLLGVLLVDLIGGRTASRWLPYLAIAGLGAALVALALQWDNPNPISFLGSFNADNLSIAFRAIIALS 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 108 STLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECFSLCSYLLSGYTKRDLRSNEATMKYLLMG 187
Cdd:PRK02504 91 TLVTLLMSWRYVEQSGTPLGEFAAILLTATLGGMFLSGATELVMIFISLETLSIASYLLTGYMKRDPRSNEAALKYLLIG 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 188 GASSSILVYGFSWLYGLSGGEIELQEIVNGLINTQmynSPGISIALIFITVGLGFKLSLAPFHQWTPDVYEGSPTPVVAF 267
Cdd:PRK02504 171 AASSAIFLYGSSLLYGLSGGSTQLSAIALALITSP---SLGLALALVFVIAGIAFKISAVPFHQWTPDVYEGSPTPVVAF 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 268 LSVTSKVAALALATRILDIPFYFSSNEWHLLLEILAILSMILGNLLAITQTSMKRMLAYSSIGQIGYVIIGIIVgDSNDG 347
Cdd:PRK02504 248 LSVGSKAAGFALAIRLLVTAFPSFDEQWKLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVA-GTEAG 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 348 YASMITYMLFYISMNLGTFACIVLFGLRTGTDNIRDYAGLYMKDPFLALSLALCLLSLGGLPPLAGFFGKLYLFWCGWQA 427
Cdd:PRK02504 327 YASMVFYLLAYLFMNLGAFACVILFSLRTGTDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGKIYLFWAGWQA 406
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 428 GLYFLVSIGLLTSVLSIYYYLKIIKLLMTGRNQEITPYVRNYrrSPLRSN----NSIELSMTVCVIASTILGISMNPILA 503
Cdd:PRK02504 407 GLYLLVLVGLVTSVISIYYYIRVIKMMVVKEPQEMSDVVKNY--PEINWNlpgmRPLRVGLVLCVIATALAGILSNPLFT 484
|
....*.
gi 288558932 504 IAQDTL 509
Cdd:PRK02504 485 LANTSV 490
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
49-506 |
1.13e-128 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 382.93 E-value: 1.13e-128
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 49 DLTSDQKDRPWFYFISSTSLVISITALLFRWREEPIISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITE 128
Cdd:COG1007 24 DLFLPRRSRRLLAGLALLGLLLALALLLLALGGGTGTAFGGMFVVDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGE 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 129 FLLFVLTATLGGMFLCGANDLITIFVALECFSLCSYLLSGYTKRDLRSNEATMKYLLMGGASSSILVYGFSWLYGLSGgE 208
Cdd:COG1007 104 FYALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATG-S 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 209 IELQEIVNGLiNTQMYNSPGISIALIFITVGLGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAALALATRILDIPF 288
Cdd:COG1007 183 LNLAGIAAAL-AAGGANSPLLLLGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLRLLVEAF 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 289 YFSSNEWHLLLEILAILSMILGNLLAITQTSMKRMLAYSS-----------IGQigyviigiivgdSNDGYASMITYMLF 357
Cdd:COG1007 262 PGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSiahagylllglAAG------------TPLGVSAALFYLLA 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 358 YISMNLGTFACIVLFGLR-TGTDNIRDYAGLYMKDPFLALSLALCLLSLGGLPPLAGFFGKLYLFWCGWQAGLYFLVSIG 436
Cdd:COG1007 330 YLFMNLGAFAVILLLSRKgGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIA 409
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 437 LLTSVLSIYYYLKIIKLLMTGRNQEitpyvrnyrRSPLRSNNSIELSMTVCVIASTILGISMNPILAIAQ 506
Cdd:COG1007 410 VLNSVISAYYYLRVVKAMYFDEPEE---------EAPISAPPGLRVALVIAALLVLLLGIFPGPLLDLAA 470
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
51-506 |
1.61e-106 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 326.01 E-value: 1.61e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 51 TSDQKDRPWFYFISSTSLVISITALLfrWREEPIISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIEctEMAITEFL 130
Cdd:PRK05777 31 VRRHSRRATLAVLALLLALVALLFVL--GAAGGGTAFGGMLVVDGFALFLKGLILLASLLALLLARPYLE--DRGRGEFY 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 131 LFVLTATLGGMFLCGANDLITIFVALECFSLCSYLLSGYTKRDLRSNEATMKYLLMGGASSSILVYGFSWLYGLSGGeIE 210
Cdd:PRK05777 107 LLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGS-LS 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 211 LQEIVNGLINTQMyNSPGISIALIFITVGLGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAALALATRILDIPFYF 290
Cdd:PRK05777 186 FAGIAKALADGSG-NSLLLLFGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLLRLLVVAFGG 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 291 SSNEWHLLLEILAILSMILGNLLAITQTSMKRMLAYSSIGQIGYVIIGIIVGdSNDGYASMITYMLFYISMNLGTFACIV 370
Cdd:PRK05777 265 LSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAG-TAEGYSAVLFYLLAYLFMTLGAFGVIS 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 371 LFGLRTG-TDNIRDYAGLYMKDPFLALSLALCLLSLGGLPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVLSIYYYLK 449
Cdd:PRK05777 344 LLRRKGGeAESISDFAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLR 423
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 288558932 450 IIKLLMtgRNQEITPYVRNYRRSPLRsnnsieLSMTVCVIASTILGISMNPILAIAQ 506
Cdd:PRK05777 424 VIKLMY--FDEPPRDAPVNWPLSAGG------AVLSVSALLVLVLGIFPQPLLDLAA 472
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
31-502 |
7.00e-75 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 243.70 E-value: 7.00e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 31 FIFPECILIFGLILLLMIDL-TSDQKDRPWFYFISSTSLVISITALLFRWREEPIISFSG--NFQTNNFNEIFQFLILLC 107
Cdd:TIGR01770 3 AILPEIILLLGAFILLLYGLfYSRKKRNPLLLKNLSYIVLLSALVSLFLTLQYAAYLFTGfsFFIVDNFALLIKLILLLS 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 108 STLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECFSLCSYLLSGYTKRDLRSNEATMKYLLMG 187
Cdd:TIGR01770 83 TLLTFFFALSYLSKEKINKFEFYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLKYFILG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 188 GASSSILVYGFSWLYGLSGgEIELQEIVNGLiNTQMYNSPGISIALIFITVGLGFKLSLAPFHQWTPDVYEGSPTPVVAF 267
Cdd:TIGR01770 163 AFSSGLLLFGISLIYGFTG-SLNFEDLLLFL-SNGMLNISLLLLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAF 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 268 LSVTSKVAALALATRILDIPFYFSSNEWHLLLEILAILSMILGNLLAITQTSMKRMLAYSSiGQIGYVIIGIIVGDSNDG 347
Cdd:TIGR01770 241 FSIVPKIAIFAVFLRLFLYILFGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSS-ISHVGYILIGLLAGTLEG 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 348 YASMITYMLFYISMNLGTFACIVL--FGLRTGTDNIRDYAGLYMKDPFLALSLALCLLSLGGLPPLAGFFGKLYLFWCGW 425
Cdd:TIGR01770 320 IKAVLFYIFIYALMSLGAFGVLSLlrSYKDEWIEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALL 399
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 288558932 426 QAGLYFLVSIGLLTSVLSIYYYLKIIKLLMTGRNQEITPYVrnyrrsPLRSNNSIELSMTvcVIASTILGISMNPIL 502
Cdd:TIGR01770 400 KSGLYWLAVIAVLTSVIGAFYYLRVVKVMYFDKPERRIPSN------PQSKAQSLLLSIS--ALFILFLGLFPSLIL 468
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
146-440 |
5.84e-71 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 227.97 E-value: 5.84e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 146 ANDLITIFVALECFSLCSYLLSGYTKRDLRSNEATMKYLLMGGASSSILVYGFSWLYGLSGgEIELQEIVNGLinTQMYN 225
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTG-TLSFDELSKAL--TGGLN 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 226 SPGISIALIFITVGLGFKLSLAPFHQWTPDVYEGSPTPVVAFL-SVTSKVAALALATRILdiPFYFSSNEWHLLLEILAI 304
Cdd:pfam00361 78 SSGLLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLaATLVKAGGYGLIRRSL--LYLPSSPFIQQILLILAI 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 305 LSMILGNLLAITQTSMKRMLAYSSIGQIGYVIIGIIVGDsNDGYASMITYMLFYISMNLGTFACIVLFGL-RTGTDNIRD 383
Cdd:pfam00361 156 ISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGT-IYGIQAAIFHLLTHGLFSAGLFLCAGSVIYrRVHTRNIRD 234
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 288558932 384 YAGLYMKDPFLALSLALCLLSLGGLPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTS 440
Cdd:pfam00361 235 YGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
57-451 |
4.55e-40 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 149.91 E-value: 4.55e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 57 RPWFYFISST-SLVISITALLFRWREEPIISFSGNFQT--------NNFNEIFQFLILLCSTLCIPLSVEYIEcTEMAIT 127
Cdd:COG0651 29 QRALSLLASLaLLALALALLLQVLAGGPLVYALGGWPApfgivlvaDRLSALFLLLTALVALAVLLYSIGYMR-HERRGR 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 128 EF--LLFVLTATLGGMFLcgANDLITIFVALECFSLCSYLLSGYTKRDlRSNEATMKYLLMGGASSSILVYGFSWLYGLS 205
Cdd:COG0651 108 RFypLFLLLLAGMNGAFL--TGDLFNLFVFFEVMLLASYGLVALGGTK-EALRAGLKYLILNLVGSALFLLGVGLLYGAT 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 206 GGeielQEIVNGLINTQMYNSPGISIALIFITVGLGFKLSLAPFHQWTPDVYEGSPTPVVAFLS-VTSKVAALALATRIL 284
Cdd:COG0651 185 GT----LNMADLAARLAELDPGLLLAAFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSgLLTKVGVYAILRVLT 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 285 DIPFYFSSNEWHLLLEILAILSMILGNLLAITQTSMKRMLAYSSIgqigyviigiivgdSNDGY---------ASMITYM 355
Cdd:COG0651 261 LLFGADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSV--------------SQIGYillglglgtPLGLAGA 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 356 LFYISMNlgTFACIVLF------GLRTGTDNIRDYAGLYMKDPFLALSLALCLLSLGGLPPLAGFFGKLYLFWCGWQAGL 429
Cdd:COG0651 327 LFHLLNH--ALAKALLFlaagaiERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGA 404
|
410 420
....*....|....*....|..
gi 288558932 430 YFLVSIGLLTSVLSIYYYLKII 451
Cdd:COG0651 405 WLLAAVLLLSSLLTLAYFVRIF 426
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
138-454 |
5.94e-38 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 142.86 E-value: 5.94e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 138 LGGMFLCGANDLITIFVALECFSLCSYLLSGYTKRDLRSNEATMKYLLMGGASSSILVYGFSWLYGLSGGeIELQEIVNG 217
Cdd:MTH00196 4 LGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGG-LHLSYINLV 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 218 LINTQMYNSPGISIALIFITVGLGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAalalatrILDIPFYFSSNEWHL 297
Cdd:MTH00196 83 LNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLG-------IFSILVSIGLNVNIL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 298 LleILAILSMILGNLLAITQTSMKRMLAYSSiGQIGYVIIGIIVGDSNDGYASMITYMLFYISMNLGTFACIVLFGlrTG 377
Cdd:MTH00196 156 L--IGGLFSLFVGAIGALNQTKIKRLLAYSG-IGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVFSIILALN--VY 230
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 288558932 378 TDNIRDYAGLYMKDPFLALSLALCLLSLGGLPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVLSIYYYLKIIKLL 454
Cdd:MTH00196 231 KNLIIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRIVKIL 307
|
|
| Ndh2_N |
pfam19530 |
NAD(P)H-quinone oxidoreductase subunit 2 N-terminal; This domain represents the N-terminal of ... |
18-117 |
1.43e-37 |
|
NAD(P)H-quinone oxidoreductase subunit 2 N-terminal; This domain represents the N-terminal of NAD(P)H-quinone oxidoreductase subunit 2 (or subunit B), part of the P-module (pumping) of the photosynthetic complex I from plants and cyanobacteria, which is structurally and functionally related to the respiratory complex I from mitochondria and bacteria. It is involved in the electron transfer between photosynthetic complex I and photosystem I.
Pssm-ID: 437362 [Multi-domain] Cd Length: 100 Bit Score: 133.44 E-value: 1.43e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 18 FMKAFHLLLFNGSFIFPECILIFGLILLLMIDLTSDQKDRPWFYFISSTSLVISITALLFRWREEPIISFSGNFQTNNFN 97
Cdd:pfam19530 1 FMKAFHLSLFYGSTIFPECILIFGLISILMIDSTSKQKDIPWLYFISSTSLLLSIFILIFRLKEEPVISFLGNFQADNFN 80
|
90 100
....*....|....*....|
gi 288558932 98 EIFQFLILLCSTLCIPLSVE 117
Cdd:pfam19530 81 KIFRIFIALCSTLCIPLSVE 100
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
68-454 |
3.43e-34 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 134.37 E-value: 3.43e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 68 LVISITALLFRWREEPIISFSGNFQTNNFNEIFQFLILLCStLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGAN 147
Cdd:MTH00199 39 LIVELNSLNLFQSDKVLDGTNGLLLTNSWIIISKIIIIIGS-ISILLMGSGETILSEGGQSSPILILIVALGSLLLVSSI 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 148 DLITIFVALECFSLCSYLLSGYTKRDLRSNEATMKYLLMGGASSSILVYGFSWLYGLSGgEIELQEIvnglintqmyNSP 227
Cdd:MTH00199 118 NWLSIYLAIELQTLTLFILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTG-ETSIQGI----------NSI 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 228 GI-SIALIFITVGLGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAALALATRIldipfYFSSNewhlLLEILAILS 306
Cdd:MTH00199 187 LTgDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQI-----GPVTN----VVLICAVLS 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 307 MILGNLLAITQTSMKRMLAYSSIGQIGYVIIGIIVgDSNDGYASMITYMLFYISMNLGTFAciVLFGLRTGTDNIRDYAG 386
Cdd:MTH00199 258 IIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAI-GSFESIQASLIYMIIYVIMSICSFS--IILSLKLTKGLIVEVSG 334
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 288558932 387 LYMKDPFLALSLALCLLSLGGLPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVLSIYYYLKIIKLL 454
Cdd:MTH00199 335 LSRKNPVIALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRVVQII 402
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
102-510 |
2.60e-33 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 131.93 E-value: 2.60e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 102 FLILLCSTLCIPLSVEYIECTEMAITEF--LLFVLTATLGGMFLCGanDLITIFVALECFSLCSYLLSGYTkRDLRSNEA 179
Cdd:PRK08375 81 LFLLVTSILAIAALLYAIGYGEHRQTRFyaLFLLLLAGLLGALLTA--DLFNLFVFLEIMSLSSYALVAMG-GDRRALAA 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 180 TMKYLLMGGASSSILVYGFSWLYGLSG--GEIELQEIVNGlintqmynSPGISIALIFITVGLGFKLSLAPFHQWTPDVY 257
Cdd:PRK08375 158 ARKYLIVGLIGSTFLLIGVGLLYGVTGtlNMADLAGALAE--------NPTVVTAFGFVLLALALKAAVFPLHTWLPRAY 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 258 EGSPTPVVAFLSVT-SKVAALALATRILDI--PFYFSSNEWHLLLEILAILSMILGNLLAITQTSMKRMLAYSSIGQIGY 334
Cdd:PRK08375 230 PAAPPVVTALLSGLvTKVAVYALIRIYFTVfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGY 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 335 VIIGIIVGdSNDGYASMITYMLFYISMNLGTFACIVLFGLRTGTDNIRDYAGLYMKDPFLALSLALCLLSLGGLPPLAGF 414
Cdd:PRK08375 310 ILLGLALL-TPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGF 388
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 415 FGKLYLFWCGWQAGLYFLVSIGLLTSVLSIYYYLKIIKLLMTGrnqEITPYVRNYRRSPlrsNNSIELSMTVCVIASTIL 494
Cdd:PRK08375 389 VSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWYRAFFG---PPPPGSEAPKQEA---PLGMLAPSLALALLSLLL 462
|
410
....*....|....*.
gi 288558932 495 GISMNPILAIAQDTLF 510
Cdd:PRK08375 463 GIYAGPLLQLADAAAA 478
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
96-501 |
3.03e-27 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 114.68 E-value: 3.03e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 96 FNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFV-LTATLGGMFLCGanDLITIFVALECFSLCSYLLSGYTKRDL 174
Cdd:PRK12667 83 LGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLgLEAGMLGILLTG--DAFNLFVMLEVLSISAYGLVAYYRDRG 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 175 RSNEATMKYLLMGGASSSILVYGFSWLYGLSG--GEIELQEIVNGLINTQMYNSPG-----ISIALIFITVGLGFKLSLA 247
Cdd:PRK12667 161 DAVEAAIKYALIGAVGTTLYFLALAFLYATFGtlNMADLSAKIRGLSFPLTGGLAGnpplaLGVALALALWAFTIKAAIF 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 248 PFHQWTPDVYEGSPTPVVAFLS-VTSKVAALALAtRILDIPFYFSSNE---WHLLLEILAIL---SMILGNLLAITQTSM 320
Cdd:PRK12667 241 PNHFWLPDAHPAAPSPVSAMLSgLVVNVGAYAII-RFLYTIFGISPSLidfRAALSPILIILgavSAIIGALMMVVQKDV 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 321 KRMLAYSSIgqigyviigiivgdSNDGYASM---------ITYMLFYISMNlgTFACIVLF---GL---RTGTDNIRDYA 385
Cdd:PRK12667 320 KRLLAYSTI--------------SHMGYIFMgigigtqlgLAAALFHIINH--AIAKSLLFlasGVfihAAGTRDIDELA 383
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 386 GLYMKDPFLALSLALCLLSLGGLPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVLSIYYYLKIIKLLMTGRNQEItpy 465
Cdd:PRK12667 384 GLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYFRAWYSLFFGKPKSG--- 460
|
410 420 430
....*....|....*....|....*....|....*.
gi 288558932 466 vrnyRRSPLRSNNSIELSMTVCVIASTILGISMNPI 501
Cdd:PRK12667 461 ----EEVEHKESPSMSVVILVLALAVLILGILALFL 492
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
82-506 |
1.27e-26 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 112.94 E-value: 1.27e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 82 EPIISFSGNFQ--------TNNFNEIFQFLILLCSTLCIPLSVEYI--ECTEMAITEFLLFVLTATlgGMFLCGanDLIT 151
Cdd:PRK08377 57 KPIIIMAGGWKppvginlyIGPFAALFVLIIAIVSFIMSIFSLKAVevEPIDKYAMLFLLLMLGAT--GMIATG--DIFN 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 152 IFVALECFSLCSYLLSGYTKrDLRSNEATMKYLLMGGASSSILVYGFSWLYGlSGGEIELQEIVNgLINTQMYNSPGISI 231
Cdd:PRK08377 133 LFVFMEITAITAYALTAYNK-TGEAAEASMKYIVLGGIGSSFFLIGVALIYG-ATGTLNMAHIAQ-LAGTIDPTVAQVGL 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 232 ALIFItvGLGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAALALATRILDIpfYFSSNEWHLLLE---ILAILSMI 308
Cdd:PRK08377 210 ALLIF--GLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYL--MQNANGWSSVLKlviIMATLTVF 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 309 LGNLLAITQTSMKRMLAYSSiGQIGYVIIGIIVGDSNDGYASMITYMLFYISMNLGTFACIVLFGLRTGTDNIRDYAGLY 388
Cdd:PRK08377 286 FAELSALRQKNVKRMIAYSS-IGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLG 364
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 389 MKDPFLALSLALCLLSLGGLPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVLSIYYYLKIIKLLMTGRNQEItpyvrn 468
Cdd:PRK08377 365 KRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVLGASVVEAVYYFRLIHTMWFKGEGER------ 438
|
410 420 430
....*....|....*....|....*....|....*...
gi 288558932 469 yrrspLRSNNSIELSMTVCVIASTILGISMNPILAIAQ 506
Cdd:PRK08377 439 -----IRENAAIGIILLLLAALIVVIGIYPTPFWEVVQ 471
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
130-451 |
7.00e-26 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 111.49 E-value: 7.00e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 130 LLFVLTATLGGMFLCGANDLITIFVALECFSLCSYLLSGYTKRDLRSN--------EATMKYLLMGGASSSILVYGFSWL 201
Cdd:MTH00198 191 FALVLIVGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHFpspgntppESGLKYWILGAMSSGFYLFGCALY 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 202 YGLSGGEIELQEIVNGLINTQMYNSPGISIALIFITVGLGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAALALAT 281
Cdd:MTH00198 271 FGFTGNEGMLGTILSATLETTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYILLT 350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 282 RILDIPfyfssnewHLLLEIlAILSMILGNLLAITQTSMKRMLAYSSiGQIGYVIIGIIVGDSNDGYASMITYMLFYISM 361
Cdd:MTH00198 351 SLVITS--------KLLLSV-AIISLVVGAFGALNQTRIKRLLAYSG-IGHIGFILIGVSAGTYESLQASWTYAVTYLVS 420
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 362 NLGTFACIVL---FGLRTGTDNIR--------------DYAGLYMKDPFLALSLALCLLSLGGLPPLAGFFGKLYLFW-- 422
Cdd:MTH00198 421 ALASFTVICTleeFGTRTPTSRQRdgsfgnynlvrrlvDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVgs 500
|
330 340 350
....*....|....*....|....*....|....
gi 288558932 423 --CGWQAGL--YFLVSI-GLLTSVLSIYYYLKII 451
Cdd:MTH00198 501 ikIAFSSSLsiYYLVALfAIICTCISAFYYIRIV 534
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
91-329 |
2.80e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 99.79 E-value: 2.80e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 91 FQTNNFNEIFQFLILLCSTLCIPLSVEYI-ECTEMAITEFLLFVLTATLGGMFLCGanDLITIFVALECFSLCSYLLSGY 169
Cdd:PRK08376 86 WEVDLFGAFMALIATIVSFLAVLYSISYMkHDTGLDKYYTLILLLELGMLGMAITG--DLFNFFVFLEIMSIASYALVAF 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 170 TKRDLRSNEATMKYLLMGGASSSILVYGFSWLYGLSGgeielqEIVNGLINTQMYNSPGI--SIALIFITVGLGFKLSLA 247
Cdd:PRK08376 164 RNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYG------TLNMAYLAVKMSENPTVvaKIALALFIAGLAMKSGAV 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 248 PFHQWTPDVYEGSPTPVVAFLSVTSKVAALALAtRILDIPFYFSSNEWHL--LLEILAILSMILGNLLAITQTSMKRMLA 325
Cdd:PRK08376 238 PVHMWLPDAYPAAPSSISAMLLVIKQAGLYALA-RVLFSIYGPAINLATVgwVIIILGCLTMFVGVAMAVVQKDVKRLLA 316
|
....
gi 288558932 326 YSSI 329
Cdd:PRK08376 317 YHSV 320
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
130-507 |
7.61e-18 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 86.16 E-value: 7.61e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 130 LLFVLTATLGGMFLCGanDLITIFVALECFSLCSYLLS--GYTKRDLRsneATMKYLLMGGASSSILVYGFSWLYGLSG- 206
Cdd:PRK12663 113 FILLLMAGVIGSFLTG--DLFNLYVWFEVMLIASFVLItlGQEREQLR---GAIKYVVLNLIGSWLFLLGIGLLYGTFGt 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 207 ---GEIELQeivnglINTQMYNSPGISIALIFITVgLGFKLSLAPFHqWTPDVYEGSPTPVVA-FLSVTSKVAALALaTR 282
Cdd:PRK12663 188 lnmAHIAMR------LNDMGDTATLTTIALLFLLA-FGMKAALFPFM-WLPAAYHTPNTEVAAlFAALLTKVGIYAL-IR 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 283 ILDIPFYFSSNEWHLLLEILAILSMILGNLLAITQTSMKRMLAYSSIGQIGYVIIGIIVGdSNDGYASMITYMLFYISMN 362
Cdd:PRK12663 259 VFTLLFPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLGLALG-TPAGINGAIFYLVHDMVVK 337
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 363 LGTFACIVLFGLRTGTDNIRDYAGLYMKDPFLALSLALCLLSLGGLPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVL 442
Cdd:PRK12663 338 TALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLI 417
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 288558932 443 SIYYYLKIIkLLMTGRNQEITpyVRNYRRSPLRSnnsiELSMTVCVIASTILGISMNPILAIAQD 507
Cdd:PRK12663 418 TMYSLFRIF-FLAYWGDKDGE--EVNFKPIPLYR----KLPLSILAVVVIAMGIAAEPLLNLTQD 475
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
55-506 |
1.61e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 85.17 E-value: 1.61e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 55 KDRPWFYFISSTSLVIS--ITALLF--RWREEPIISFSGNFQTNNFNE----IFQFLILLCSTLCIPLSVEY------IE 120
Cdd:PRK12662 24 KNRKLVKIISCIVVAVSffIALVLFvqVYSGGVIKYSLGGWGPPYGIElrvdILSATMLVLVNFIAVMSVLYgiypnrKE 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 121 CTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECFSLCSYLLSGyTKRDLRSNEATMKYLLMGGASSSILVYGFSW 200
Cdd:PRK12662 104 ISVNKIPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVA-MGRDKKALVAAFEYLIIGTIGATFYLIGIGF 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 201 LYGLSGgeiELQEIVNGLINTQMYNSPGISIALIFITVGLGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAALALA 280
Cdd:PRK12662 183 LYAITG---TLNMGDMFLIIQDLPTNRAIQIGVLFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLI 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 281 TRIL----DIPFYFSSNEWHLLLEILAILSMILGNLLAITQTSMKRMLAYSSIgQIGYVIIGIIVGDSNDGYASMITYML 356
Cdd:PRK12662 260 IRIVydvfKANFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSI-SHIGYIILAVSLNTYYGLAAAVAYIV 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 357 FYISMNLGTFACIVLFGLRTGTDNIRDYAGLYMKDPFLALSLALCLLSLGGLPPLAGFFGKLYLFWCGWQAGLYFLVSIG 436
Cdd:PRK12662 339 NHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVL 418
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 288558932 437 LLTSVLSIYYYLKII-KLLMTGRNQEitpyvRNYRRSPLRSNNSIELSMTVCVIASTILGISMNPILAIAQ 506
Cdd:PRK12662 419 LVGSGLSVIYVWKIVeALYFESRMVE-----SKANDKAFKTPNAMVLCIWIMAILSIIVGIYPIPLTLISE 484
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
129-450 |
1.70e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 85.00 E-value: 1.70e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 129 FLLFVLTATLGGMFLCGanDLITIFVALECFSLCSYLLS--GYTKRDLRsneATMKYLLMGGASSSILVYGFSWLYGLSG 206
Cdd:PRK07691 112 PSVLFMLAGVNGAFLTG--DIFNLFVFFEVMLMASYVLIviGGTKIQLR---ESIKYVLINVVSSAFFVVAVAILYSVVG 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 207 gEIELQEIVNGLINTQMYNSPGIS-IALIFITVgLGFKLSLAPFHQWTPDVYEGSPTPVVAFL-SVTSKVAALALAtRIL 284
Cdd:PRK07691 187 -TLNMADISVKIAELSAGQTGLITvVAILFLFV-FATKAGLFPLYFWLPGSYYAPPIAIAALFgALLTKVGVYAIA-RTF 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 285 DIPFYFSSNEWHLLLEILAILSMILGNLLAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSnDGYASMITYMLFYISMNLG 364
Cdd:PRK07691 264 TLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTE-SGMIGAIYYLIHDMIVKAA 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 365 TFACIVLFGLRTGTDNIRDYAGLYMKDPFLALSLALCLLSLGGLPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVLSI 444
Cdd:PRK07691 343 LFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVL 422
|
....*.
gi 288558932 445 YYYLKI 450
Cdd:PRK07691 423 YSVIKI 428
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
87-502 |
2.41e-17 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 85.05 E-value: 2.41e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 87 FSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFlcgANDLITIFVALECFSLCSYLL 166
Cdd:PRK08668 61 FKLTFTLTHLSWFFAMISLLVIFSVAFFMVSEKTKNDAYFNMFALMSLAGVLGVFL---ANDLLTLYIFWEIMTFSSFMM 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 167 SGYTKRDlrSNEATMKYLLMGGASSSILVYGFSWLYGLSGgEIELQEIVNGLINTqmyNSPGISIALIFITVGLGF-KLS 245
Cdd:PRK08668 138 VPMGKKE--SRKASLKYFVLSAIGAYAMLYAIFLIYAKTG-TFDFADISQGLIND---TSTGFALIVFLFLLAFGVaKAG 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 246 LAPFHQWTPDVYEGSPTPVVAFLS-VTSK----VAALALA----TRIL-DIPFYFSSNEWHLLLEILAILSMILGNLLAI 315
Cdd:PRK08668 212 IFPLHVWAPDAYSEAPQSFSAVLSgQLSKlgayGFLLVLYvlpgTKLFsEFGTYRGVPLFNYILAWLGNISIIVGTLMAI 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 316 TQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASM---ITYMLFYISMNLGTFACIvlfgLRTGTDNIRDYAGLYMKDP 392
Cdd:PRK08668 292 LQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLfhvFNHALFKGLFFLIFAAVI----YRTGTTKISEMGGLIEKMP 367
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 393 FLALSLALCLLSLGGLPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVLSIYYYLKIIKLLMTGrnqEITPYVRNYRRS 472
Cdd:PRK08668 368 FTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIGSFLYVFRPLAGVFLG---QLPSDHKDVKEA 444
|
410 420 430
....*....|....*....|....*....|
gi 288558932 473 PLrsnnSIELSMTVCVIASTILGISMNPIL 502
Cdd:PRK08668 445 PL----PMLIPMAILVLLNVVFGVAPGLVL 470
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
102-328 |
5.40e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 83.46 E-value: 5.40e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 102 FLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGanDLITIFVALECFSLCSYLLSGYTKRDlRSNEATM 181
Cdd:PRK07234 71 YFILTNALVTLAVIFYCWESAKTRFFYAQLLILHGSVNAAFVCA--DLISLYVALEVLSIATFLLVAYPRTD-RAIWVGL 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 182 KYLLMGGAS------SSILVYGFSWLYGLSGgeielqeivnglintqMYNSPGISIALIFitVGLGFKLSLAPFHQWTPD 255
Cdd:PRK07234 148 RYLFYSNVAmlfyliGAVLVYQANGTFAFSG----------------LATADPEAFALIA--LGLLVKGGIFVSGLWLPL 209
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 288558932 256 VYEGSPTPVVAFLS-VTSKVAALALATRILDIPfyfssnEWHLLLEILAILSMILGNLLAITQTSMKRMLAYSS 328
Cdd:PRK07234 210 THSEAEPPVSALLSgVVVKAGVFPLVRCALDVP------GLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFST 277
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
146-503 |
5.17e-16 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 80.97 E-value: 5.17e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 146 ANDLITIFVALECFSLCSYLLSGYTKRDLRSNEATMKYLLMGGASSSILVYGFSWLYgLSGGEIELQEIVNGLinTQMYN 225
Cdd:COG1009 130 SDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLG-AIAGTLNFSELLAAA--PTILS 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 226 SPGISIALIFITVG-LGfKLSLAPFHQWTPDVYEGsPTPVVAFLS----VTSKVAALALATrildiPFYFSSNEWHLLLE 300
Cdd:COG1009 207 SPLLTLILLLLLLGaFG-KSAQFPLHFWLPDAMEG-PTPVSALLHaatmVKAGVYLLARLS-----PLFALSPVWLTVVA 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 301 ILAILSMILGNLLAITQTSMKRMLAYSSIgqigyviigiivgdSNDGY------ASMITYMLFYIsMNLGTF-------A 367
Cdd:COG1009 280 IIGAITALFAALIALAQTDIKRVLAYSTV--------------SQLGYmflalgVGAYVAALFHL-LTHAFFkallflgA 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 368 CIVLfgLRTGTDNIRDYAGLYMKDPFLALSLALCLLSLGGLPPLAGFFGKLYLFWCGWQAGL--YFLVSIGLLTSVLSIY 445
Cdd:COG1009 345 GSVI--HATGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGlgPLLLAVALLGAFLTAF 422
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 288558932 446 YYLKIIKLLMTGRNQEITPyvrnyrRSPLRSNNSIELSMTVCVIASTILGISMNPILA 503
Cdd:COG1009 423 YSFRLFFLVFFGKPRPKTP------KHPHESPWLMTLPLVVLAVLSLVLGLLLPGLLE 474
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
129-326 |
1.22e-15 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 79.31 E-value: 1.22e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 129 FLLFVLTATLGGMFLcgANDLITIFVALECFSLCS---YLLSGYTkrdlRSNEATMKYLLMGGASSSILVYGFSWLYGLS 205
Cdd:PRK06277 104 FLMLMGLASVSAIVL--ADDIFNLYVFFEIAAIVQvglVIASGTE----EAYKAALKYMILGNVAGSILLLGIGFLLAST 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 206 GgEIELQEIVNGLINTqmYNSPGISIALIFITVGLGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAALALATRILD 285
Cdd:PRK06277 178 G-TLNITDIHNALLVN--PTSPVIYGGLLLLIFGLLYGSGLPPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLVIFK 254
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 288558932 286 I---PFYFSSNEWHLLLeiLAILSMILGNLLAITQTSMKRMLAY 326
Cdd:PRK06277 255 LfggLSYFPSAQGVLIA--LSVLAMVFGVVMALLQTDYKRLLAY 296
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
129-506 |
2.23e-15 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 78.44 E-value: 2.23e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 129 FLLFVLTATLGGMFLcgANDLITIFVALECFSLCSYLLSGYTKRDLRSnEATMKYLLMGGASSSILVYGFSWLYGLSGGE 208
Cdd:TIGR01972 110 ALLLLLEAGVIGVFL--ALDLFLFYVFWEAMLIPMYLLIGVWGGPNRI-YAAMKFFLYTLAGSLLMLLAILGLYFLGGGT 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 209 IELQEivngLINTQMYNSPGiSIALIFITVGLGFKLSLAPFHQWTPDVYEGSPTPVVAFLS-VTSKVAALALATRILDIp 287
Cdd:TIGR01972 187 FDLLE----LLNLPLPFGVQ-TWLFLAFFIAFAVKVPLFPLHTWLPDAHVEAPTAGSVILAgVLLKMGTYGFLRFNLPL- 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 288 FYFSSNEWHLLLEILAILSMILGNLLAITQTSMKRMLAYSSIgqigyviigiivgdSNDGY----------ASMITYMLF 357
Cdd:TIGR01972 261 FPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSI--------------SHMGFvllgifsfneLGISGAVFQ 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 358 YISMNLGTFACIVLFGL---RTGTDNIRDYAGLYMKDPFLALSLALCLLSLGGLPPLAGFFGKLYLFWCGWQAGLyFLVS 434
Cdd:TIGR01972 327 MISHGLITAALFLLVGVlyeRAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLILLGSFKVNP-VVAF 405
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 288558932 435 IGLLTSVLSIYYYLKIIKLLMTGRnqeitpyVRNYRRSPLRSNNSIELSMTVCVIASTI-LGISMNPILAIAQ 506
Cdd:TIGR01972 406 LAALGIVLAAAYMLTLYKRVFFGE-------LSNPEVAEFPDLNGREIAVLAPLVVLILfLGLYPNPLLDLTE 471
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
129-328 |
5.56e-15 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 77.04 E-value: 5.56e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 129 FLLFVLTATLGGMFLcgANDLITIFVALECFSLCSYLLS---GYTKRdlrsNEATMKYLLMGGASSSILVYGFSWLYGLS 205
Cdd:COG1008 115 ALLLLLEAGMIGVFL--ALDLFLFYVFWELMLIPMYFLIgiwGGERR----IYAAIKFFLYTLAGSLLMLVAILALYFLA 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 206 GGEI-ELQEIVNGLI--NTQMynspgisiaLIFITVGLGF--KLSLAPFHQWTPDVYEGSPTPVVAFLS-VTSKVAALAL 279
Cdd:COG1008 189 GALTfDIAELAAAPLplTAQL---------LLFLAFFIAFavKVPMFPFHTWLPDAHVEAPTAGSVLLAgVLLKMGGYGL 259
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 288558932 280 AtRILdIP-FYFSSNEWHLLLEILAILSMILGNLLAITQTSMKRMLAYSS 328
Cdd:COG1008 260 L-RFA-LPlFPEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSS 307
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
64-328 |
9.60e-15 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 76.51 E-value: 9.60e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 64 SSTSLVISITALLFRWREEPIISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYI----ECTEMAITEFLLF--VLTAT 137
Cdd:PRK06458 38 ITLTLILALWLVFTVPDAGEIFAAGLWFFIDDLNVFFLALIGVVGFLTSLYSIGYMrhevEHGELSPVTLRLYygMYQLF 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 138 LGGMFLC-GANDLITIFVALECFSLCSYLLSGyTKRDLRSNEATMKYLLMGGASSSILVYGFSWLYglSGGEIELQEIVN 216
Cdd:PRK06458 118 LFTMLLAlTSNNLGLMWVAIEATTLSSALLVG-IYRTRASLEAAWKYIIICSVGVAFALFGTILVY--ANAATVMGDGEM 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 217 GLINTQMYNSPG------ISIALIFITVGLGFKLSLAPFHQWTPDVYEGSPTPVVAFLS-VTSKVAALALaTRILDIPFY 289
Cdd:PRK06458 195 AILWTELLKHASlldptlMKLAFVFLLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSgVLLNVALYAV-LRYYILIDA 273
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 288558932 290 FSSNEW--HLLLeILAILSMILGNLLAITQTSMKRMLAYSS 328
Cdd:PRK06458 274 AIGSDFpgRLLL-IFGLLSVLVAAFFLLRQRDIKRLFAYSS 313
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
133-445 |
1.01e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 76.55 E-value: 1.01e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 133 VLTATLGGMFLCGanDLITIFVALECFSLCSYLL--SGYTKRDLRsneATMKYLLMGGASSSILVYGFSWLYGLSGG--- 207
Cdd:PRK12665 119 ILVAGVSNAFLAG--DLFNLYVGFEILLVASYVLltLGATAARVR---AGVTYVMVSMVSSLLFLIGIALVYAATGTlnm 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 208 ---EIELQEIvnglintqmynSPGISIAL-IFITVGLGFKLSLAPFHQWTPDVYEGSPTPVVA-FLSVTSKVAALALA-T 281
Cdd:PRK12665 194 adlAVRLDEL-----------PSGTRTALfAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAvFAGLLTKVGVYAIIrT 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 282 RILdipfYFSSNEWHLLLEILAILSMILGNLLAITQTSMKRMLAYSsigqigyviigiivgdsndgYASMITYMLFYISM 361
Cdd:PRK12665 263 HTL----LFPGGGLDTLLMVVALLTMVVGILGAIAQSDIKRLLSFT--------------------LVSHIGYMVFGIAL 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 362 N--LGTFACIV-----------LF---GL---RTGTDNIRDYAGLYMKDPFLALSLALCLLSLGGLPPLAGFFGKLYLFW 422
Cdd:PRK12665 319 StvAGLSGAIYyvahhitvqttLFlvvGLierQAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
330 340
....*....|....*....|....*.
gi 288558932 423 CGWQAG---LYFLVSIGLLTSVLSIY 445
Cdd:PRK12665 399 AGAEDGtwlAWALVAGGVVTSLLTLY 424
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
130-450 |
1.85e-14 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 74.58 E-value: 1.85e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 130 LLFVLTATLGGMFLCG-ANDLITIFVALECFSLC--SYLLSGYTkrdLRSNEATMKYLLMGGASSSILVYGFSwlyglsg 206
Cdd:MTH00041 6 LIFLITSIILGTIIVIsSNHWFLIWLGLELNTLSiiPILSSNFS---PRSVEATIKYFLVQAFSAAILLNGAL------- 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 207 geielqeIVNGLINTQMYNSPGISIALIFITVGLGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAALALAtrildi 286
Cdd:MTH00041 76 -------IQAWLSGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILL------ 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 287 pFYFSSNEWHLLLEILAILSMILGNLLAITQTSMKRMLAYSSIGQIGYVIIGIivgdSNDGYASmITYMLFYISMNLGTF 366
Cdd:MTH00041 143 -ISISNLLNSNILILCGILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITS----AYSPNAS-IIMFLIYIIINTSIF 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 367 acivLFGLRTGTDNIRDYAGLYMKDPFLALSLALCLLSLGGLPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVLSIYY 446
Cdd:MTH00041 217 ----LIGNNFSLSTLSHLNKLSQLNPISAFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFF 292
|
....
gi 288558932 447 YLKI 450
Cdd:MTH00041 293 YLRI 296
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
129-327 |
2.95e-14 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 75.34 E-value: 2.95e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 129 FLLFVLTATLGgmfLCGANDLITIFVALECFSLCSYLLSGYTKRDLRSNEATMKYLLMGGASSSILVYGFSWLYGLSGgE 208
Cdd:PRK12647 100 YILLFMASMLG---LVLSDNLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTG-T 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 209 IELQEIVNGliNTQMYNSPGISIALIFITVGLGFKLSLAPFHQWTPDVYEgSPTPVVAFL-SVTSKVAALALATRIldIP 287
Cdd:PRK12647 176 YSLSELLAS--GDVIREHPLYLAILLLVLGGAFTKSAQFPFHFWLPNAME-APTPVSAYLhSATMVKAGIYLLARL--NP 250
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 288558932 288 FYFSSNEWHLLLEILAILSMILGNLLAITQTSMKRMLAYS 327
Cdd:PRK12647 251 VLGGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYS 290
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
128-329 |
7.78e-14 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 74.09 E-value: 7.78e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 128 EFLLFVLTATLGGMFlcgANDLITIFVALECFSLCSYLLSGYTKRDLRSNEATMKYLLMGGASSSILVYGFSWLYGLSGg 207
Cdd:PRK12649 115 QYLLLFMGSMIGMVF---SGNTIQLFIFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITG- 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 208 EIELQEIVNG--LINTqMYNSPGISIALIFITVGLGFKLSLAPFHQWTPDVYEgSPTPVVAFL-SVTSKVAALALATRIL 284
Cdd:PRK12649 191 TYDIATILQDseLIEN-IKGHPLFLITLILIFIGAAAKSAQGPFYIWLPNAME-APTPVSAFLhSATMVKAGVYLVARIH 268
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 288558932 285 diPFYFSSNEWHLLLEILAILSMILGNLLAITQTSMKRMLAYSSI 329
Cdd:PRK12649 269 --PIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYSTI 311
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
133-417 |
4.73e-13 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 71.88 E-value: 4.73e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 133 VLTATLGGMF-LCGANDLITIFVALECFSLCSYLLSGYTKRDLRSNEATMKYLL---MGGASssILVyGFSWLyGLSGGE 208
Cdd:PRK12644 111 ELVAFAGAMFgLVTSDNLLLLYVFWELTTVLSFLLIGHYAERAASRRAALQALLvttAGGLA--MLV-GIIIL-GQAAGT 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 209 IELQEIVNglintQMYNSPGISIALIFITVGLGFKLSLAPFHQWTPDVYEgSPTPVVAFLSVTSKV-AALALATRIldIP 287
Cdd:PRK12644 187 YRLSELLA-----DPPTGPAVSVAVVLILVGALSKSAIVPFHFWLPGAMA-APTPVSAYLHAAAMVkAGIYLVARL--AP 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 288 FYFSSNEWHLLLEILAILSMILGNLLAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMItyMLFYISMNLGTFA 367
Cdd:PRK12644 259 GFADVPVWRPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLA--MLLAHALFKAALF 336
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 288558932 368 CIVlfGL---RTGTDNIRDYAGLYMKDPFLALSLALCLLSLGGLPPLAGFFGK 417
Cdd:PRK12644 337 LVV--GIidhSTGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
124-478 |
1.39e-12 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 68.76 E-value: 1.39e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 124 MAITEFLLFVLTATLGGMFLCGANDLITIFVALECFSLCSYLLSGYTKRDLRSnEATMKYLLMGGASSSILVYGfswlyg 203
Cdd:MTH00144 1 MSSPSNLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSES-ESVVKYFIIQSLGSSLLIFG------ 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 204 lsggeielqeivnGLIntqMYNSPGISIALIFITVGLGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAALALatri 283
Cdd:MTH00144 74 -------------SLI---MYNLSFSWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFL---- 133
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 284 ldIPFYFSSNEWHLLLEILAILSMILGNLLAITQTSMKRMLAYSSIGQIGYVIIGIIVgdsndGYASMITYMLFYISMNL 363
Cdd:MTH00144 134 --LSNFLDLYWLAYLLCVISVLSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILH-----GSWLMWMYFLIYIVSSG 206
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 364 GTFacivlFGLRTGTDNirdyaglYMKDPFLALSLALCLLSLGGLP-------PLAGFFGKLYLFWCGWQAGLYFLVSIG 436
Cdd:MTH00144 207 FLF-----FSLWSGDSG-------SMKDLGSLKPSYKTGLSIISLLlslgglpPFLGFCSKLLVLISSMESSPLLLILLL 274
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 288558932 437 LLTSVLSIYYYLKIIKLLMTGRNQEITPYVRNYRRSPLRSNN 478
Cdd:MTH00144 275 LLGSLISLFFYLSVFFSSFLSSSKSKKSNSSKVLNSSIISLN 316
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
67-328 |
1.02e-11 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 67.45 E-value: 1.02e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 67 SLVISITALLFR------WREEPIISFSGNFQTNNF----NEIFQFLILLCS--TLCIPL-SVEYIECTEMAITEFLLFV 133
Cdd:PRK08667 36 WLVIAIALLLFAgslqlfTGNPLDIPLWGIAPGLDItfhiDRLAAFFIILIGlvSLCVAIySLGYNEHMSSNERANLLSA 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 134 LTA--TLGGMFLCGANDLITIFVALECFSLCSYLLSGYTKRDLRSNEATMKYLLMGGASSSILVYGFSWLYGLSGG-EIE 210
Cdd:PRK08667 116 LTAlfILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSfELS 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 211 LQEivnglintqmYNSPGISIALIFITVGLGFKLSLAPFHQWTPDVYEGSPTPVVAFLS-VTSKVAALALATRILDIpfY 289
Cdd:PRK08667 196 PLG----------ASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSgVMLKVAVYGLVRFLMDV--L 263
|
250 260 270
....*....|....*....|....*....|....*....
gi 288558932 290 FSSNEWHLLLEILAILSMILGNLLAITQTSMKRMLAYSS 328
Cdd:PRK08667 264 SPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSS 302
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
175-328 |
1.37e-11 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 66.00 E-value: 1.37e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 175 RSNEATMKYLLMGGASSSILVygFSWlyglsggeielqeIVNGLIN-----TQMYNSPgisiALIFITVGLGFKLSLAPF 249
Cdd:MTH00112 51 RATEAATKYFLTQAAASALIL--FSS-------------TTNAWNTgqwdiTQLTNPT----SCTLLTLALAMKLGLAPF 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 250 HQWTPDVYEGSPTPVVAFLSVTSKVAALALatrildipFYFSSNEWHL-LLEILAILSMILGNLLAITQTSMKRMLAYSS 328
Cdd:MTH00112 112 HFWLPEVLQGSTTTTALILSTWQKLAPLTL--------LLMTSNSLNPtLLLTLAILSTLIGGWGGLNQTQLRKIMAFSS 183
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
99-328 |
1.39e-11 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 67.26 E-value: 1.39e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 99 IFQFLILLCSTLCIPLSVEYIECTEMAITEF---LLFVLTATLGGMFlcgANDLITIFVALECFSLCSYLLSGYTKRDLR 175
Cdd:PRK12645 82 LFALLITGIGSLVVLYSIYYLSKKKEQLGNFyvyLLLFMGAMLGVVL---SDNLIVLYLFWELTSISSFLLISYWYEREA 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 176 SNEATMKYLL---MGGASssiLVYGFSWLYgLSGGEIELQEIVNGLINTQmyNSPGISIALIFITVGLGFKLSLAPFHQW 252
Cdd:PRK12645 159 SRYGAQKSMLitvFGGLS---MLGGFILLY-IMTGSFSIREMIANADEIQ--NSPLFIPAMILILLGAFTKSAQFPFYIW 232
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 288558932 253 TPDVYEgSPTPVVAFL-SVTSKVAALALATRIldIPFYFSSNEWHLLLEILAILSMILGNLLAITQTSMKRMLAYSS 328
Cdd:PRK12645 233 LPDAME-APTPVSAYLhSATMVKAGIYLVARF--TPIFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFST 306
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
130-328 |
1.52e-11 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 66.65 E-value: 1.52e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 130 LLFVLTATLGGMFLcgANDLITIFVALECFSLCSYLLS---GYTKRdlrsNEATMKYLLMGgASSSILV----YGFSWLY 202
Cdd:PRK06473 112 LLLLLNAGVSGAFL--AQDLLLFFLFYELELIPLYLLIaiwGGQRR----GYAATKFLLYT-AISGILIlvsfLGLVWLS 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 203 GLSGGEIELQEIVNGLINTQMynspgisIALIFITVGLGFKLSLAPFHQWTPDVYEGSPTPVvaflSVTSKVAALALATR 282
Cdd:PRK06473 185 GASSFDYEPLRSHTLPLSTQL-------LLLAPILVGFGIKIPLVPFHTWLPDAHVEASTPV----SVLLAGVLLKLGTY 253
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 288558932 283 -ILDIPFYFSSNEWHLL---LEILAILSMILGNLLAITQTSMKRMLAYSS 328
Cdd:PRK06473 254 gLLRFGVGLFPEAWVYLapwLATWAVVSVLYGASCAIAQKDMKKMVAYSS 303
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
129-450 |
1.82e-10 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 62.29 E-value: 1.82e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 129 FLLFVLTATLGGMFLCGANDLITIFVALECFSLCSYLLSGYTKRdLRSNEATMKYLLMGGASSSILVYGFSWLYGLSGGe 208
Cdd:MTH00200 6 LPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHH-PRKVEATTKYFIIQATASALLLFGGLLNAWTSGQ- 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 209 ielqeivngLINTQMYNSPGISIalifITVGLGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAALALATRildipF 288
Cdd:MTH00200 84 ---------WGISEMLGPLSETL----ILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQ-----L 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 289 YFSSNEWhlLLEILAILSMILGNLLAITQTSMKRMLAYSSIGQIGYVIIGIIvgdsndgYASMITYMLF--YISMNLGTF 366
Cdd:MTH00200 146 APALNSN--ILLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLV-------YSPNLALLYLllYVIITLTVF 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 367 aciVLFGLrTGTDNIRDYAGLYMKDPFLALSLALCLLSLGGLPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVLSIYY 446
Cdd:MTH00200 217 ---LLLNL-LNSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFF 292
|
....
gi 288558932 447 YLKI 450
Cdd:MTH00200 293 YLRL 296
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
130-328 |
3.28e-10 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 62.42 E-value: 3.28e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 130 LLFVLTATLGGMFLcgANDLITIFVALECFSLCSYLLS---GYTKRDLrsneATMKYLLMGGASSSILVYGF---SWLYG 203
Cdd:PRK07363 112 LILLINGGIAGALL--AQNLLLFFLFYELELIPFYLLIaiwGGEKRGY----ASIKFLIYTAVSGLLVLAAFlgiVWLSG 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 204 LSGGEIELQEIVNGLINTQMynspgisIALIFITVGLGFKLSLAPFHQWTPDVY-EGSPTPVVAFLSVTSKVAALALatr 282
Cdd:PRK07363 186 STSFDYDAISTQNLSLNTQL-------ILLTGLLLGFGIKIPLVPLHTWLPDAYtEASPAVAILLGGVLAKLGTYGL--- 255
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 288558932 283 iLDIPFYFSSNEWHLLLEILAI---LSMILGNLLAITQTSMKRMLAYSS 328
Cdd:PRK07363 256 -LRFGLQLFPQTWSLVAPGLAIigtISVIYGALSAIAQKDIKRMVAYSS 303
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
179-328 |
7.00e-10 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 61.37 E-value: 7.00e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 179 ATMKYLLMGGASSSILVYGFSWLYGLS---GGEIELQEIVNGLINTQMYNspgisiaLIFITVGLGF--KLSLAPFHQWT 253
Cdd:PRK05846 162 AATKFFLYTLLGSLLMLVAIIYLVVVYynaTGTFDIADLLNLPLPPGVQY-------WLFLAFFIAFavKMPMFPLHTWL 234
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 288558932 254 PDVYEGSPTPVVAFLS-VTSKVAALALaTRILdIPFY-FSSNEWHLLLEILAILSMILGNLLAITQTSMKRMLAYSS 328
Cdd:PRK05846 235 PDAHVQAPTAGSVLLAgILLKMGAYGL-LRFS-LPLFpDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSS 309
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
61-452 |
9.48e-10 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 61.31 E-value: 9.48e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 61 YFISSTSLVISITALLFRWREEPIISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGG 140
Cdd:PRK12646 44 YFLIQIPSVAKLQYLSTSIPWMKTLDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLSSRKDNLPRFYFYLTLFMFSM 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 141 MFLCGANDLITIFVALECFSLCSYLLSGYTKRDLRSNEATMKYLLMGGASSSILVYGFSWLYGLSGGEiELQEIVNGliN 220
Cdd:PRK12646 124 IGIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTN-NITEILGQ--A 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 221 TQMYNSPGISIALIFITVGLGFKLSLAPFHQWTPDVYEgSPTPVVAFL-SVTSKVAALALATRIldIPFYFSSNEWHLLL 299
Cdd:PRK12646 201 DHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRAMA-APTPVSAYLhSATMVKAGIFLLFRF--TPLLGLSNMYIYIV 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 300 EILAILSMILGNLLAITQTSMKRMLAYSSIGQIGYVIIGI-----IVGDSNDGYASMITYMLF---YISMNLGTFACIVL 371
Cdd:PRK12646 278 TFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVgigggYAQHQQDAIASIYVFVLFaalFHLMNHAIFKCALF 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 372 FGL-----RTGTDNIRDYAGLYMKDPFLALSLALCLLSLGGLPPLAGFFGKLYLFWCGWQAG---------LYFLVSIGL 437
Cdd:PRK12646 358 MGVgiidhEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTGqlsqfslisMIIIVFIGV 437
|
410
....*....|....*
gi 288558932 438 LTSVLSIYYYLKIIK 452
Cdd:PRK12646 438 IASIFTFTYALYMVK 452
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
175-328 |
2.15e-09 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 59.16 E-value: 2.15e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 175 RSNEATMKYLLMGGASSSILVYGfSWLYGLSGGEIELqeivnglINTQMynspgiSIALIFITVGLGFKLSLAPFHQWTP 254
Cdd:MTH00070 51 RATEAATKYFLTQASASALILFS-STINAWFTGEWTI-------MNMQT------PLPTIMLTIALMMKLGIAPFHFWLP 116
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 288558932 255 DVYEGSPTPVVAFLSVTSKVAALALatrILDIPFYFSSNewhlLLEILAILSMILGNLLAITQTSMKRMLAYSS 328
Cdd:MTH00070 117 EVLQGLDLTTGLILSTWQKLAPMAL---LIQISHLLNSN----LLIIMGLLSTLIGGWGGLNQTQLRKIMAYSS 183
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
146-328 |
2.34e-09 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 59.90 E-value: 2.34e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 146 ANDLITIFVALECFSLCSYLLSGYTKRDLRSNEATMKYLLMGGASSSILVYGFSWLYGLSGG-------EIELqeivngl 218
Cdd:PRK06521 132 ADDAFSFLVAWETMSLSSWFLVIANHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSydfaamrAAHL------- 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 219 intqmynSPGI-SIALIFITVGLGFKLSLAPFHQWTPDVYEGSPTPVVAFLS-VTSKVAALAlatrILDIPFYFSSNE-- 294
Cdd:PRK06521 205 -------SPFWaSLVFLLALFGFGAKAGLVPLHVWLPRAHPAAPSHVSALMSgVMLKVAIYG----ILRVVFDLLGAPgw 273
|
170 180 190
....*....|....*....|....*....|....*
gi 288558932 295 -WHLLLEILAILSMILGNLLAITQTSMKRMLAYSS 328
Cdd:PRK06521 274 wWGVLVLALGAISAVLGVLYALAEHDLKRLLAYST 308
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
100-328 |
1.10e-08 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 57.75 E-value: 1.10e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 100 FQFLILLCSTLCIPLSVEYIECTEmAITEFLLFVLTATLGGMFLCGANDLITIFVALECFSLCSYLL---SGYTKRDlrs 176
Cdd:PRK12650 84 FALLALVIGAVVFIYSARYLPRKK-GNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLiarSGSGGEA--- 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 177 neatmkyllmgGASSSILVYGFSWLYGLSG--------GEIELQEIvngLINTQMYNSPGISIALIFITVGLGF-KLSLA 247
Cdd:PRK12650 160 -----------GSIRTLILTFFGGLTLLAAvaiaatqtGTTSLSGI---LHSDVWAEKPGLTTVVAVLIAVAAFtKSAQF 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 248 PFHQWTPDVYeGSPTPVVAFLSVTSKV-AALALATRILDIpfyFSSNE-WHLLLEILAILSMILGNLLAITQTSMKRMLA 325
Cdd:PRK12650 226 PFHFWLPEAM-AAITPVSAFLHAAAVVkAGIYLLLRFSPV---FHDVAvWNWLLIIVGMITALMGAVFAVQKTDLKKLTA 301
|
...
gi 288558932 326 YSS 328
Cdd:PRK12650 302 YST 304
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
76-328 |
1.59e-08 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 57.28 E-value: 1.59e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 76 LFRWREEPIISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIEcTEMAITEFLLFVLTATLGGMFLCGANDLITIFVA 155
Cdd:MTH00032 61 LYKWIESEIFITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMS-DDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIG 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 156 LECFSLCSYLLSGYTKRDLRSNEATMKYLLMGGASSSILVYGFSWLY---------GLSGGEIELQEIVNGLINTQMYNS 226
Cdd:MTH00032 140 WEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYktigsldflTFNGGSVGSGIMDRGYYGGGAYES 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 227 PGISIALIFITVGLGF--KLSLAPFHQWTPDVYEGsPTPVVAFLSVTSKVAAlALATRILDIPFYFSSNEWHLLLEILAI 304
Cdd:MTH00032 220 PLAPFAIIGILLLIGCigKSAQLGLHTWLPDAMEG-PTPVSALIHAATMVTA-GVFLMIRSFPLFEKAPLTLLIITIFGA 297
|
250 260
....*....|....*....|....
gi 288558932 305 LSMILGNLLAITQTSMKRMLAYSS 328
Cdd:MTH00032 298 LTAFFAATVGLVQNDLKKVIAYST 321
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
129-328 |
1.95e-08 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 56.58 E-value: 1.95e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 129 FLLFVLTATLGGMFLcgANDLITIFVALECFSLCSYLLS---GYTKRDLrsneATMKYLLMGGASS-SILVYGFSwlYGL 204
Cdd:PRK12561 91 FLMLVLYSAQIGVFL--AQDLLLFFLMWELELVPVYLLIsiwGGQKRLY----AATKFILYTALASiFILVAGLA--LAL 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 205 SGGEI--ELQEIVNglintqmyNSPGISIALIFIT---VGLGFKLSLAPFHQWTPDVYEGSPTPVVAFLS-VTSKVAALA 278
Cdd:PRK12561 163 SGDTFtfDLAELGA--------KSYPLALELLLYAgflIAFGVKLPIFPLHTWLPDAHGEASAPVSMILAgVLLKMGGYA 234
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 288558932 279 LA---TRIL-DIPFYFSSnewhlLLEILAILSMILGNLLAITQTSMKRMLAYSS 328
Cdd:PRK12561 235 LIrfnVQMLpDAHVYFAP-----ALAILGVVNIIYGALNAFAQDNVKRRLAYSS 283
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
130-328 |
3.03e-08 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 55.60 E-value: 3.03e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 130 LLFVLTATLGGMFLCGANDLITIFVALEcFSLCSYLLSGYTKRDLRSNEATMKYLLMGGASSSILVYGFswlyglsggei 209
Cdd:MTH00160 8 LLFLSTLIMGTLISISSNSWFGAWMGLE-INLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSI----------- 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 210 elqeivnglINTQMYNSPGISIALIFITVGLGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAALalatrildipFY 289
Cdd:MTH00160 76 ---------ILNMLNLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPL----------IL 136
|
170 180 190
....*....|....*....|....*....|....*....
gi 288558932 290 FSSNEWHLLLEILAILSMILGNLLAITQTSMKRMLAYSS 328
Cdd:MTH00160 137 LSYLINNNFIIIIIILSAIIGAIGGLNQTSLRKILAYSS 175
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
175-328 |
5.09e-08 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 54.85 E-value: 5.09e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 175 RSNEATMKYLLMGGASSSILVYGFSWLYGLSGgeielQEIVnglinTQMYNSpgisIALIFITVGLGFKLSLAPFHQWTP 254
Cdd:MTH00105 51 RSTEAATKYFLTQATASMLLMMAIIINLMYSG-----QWTI-----TKLTNP----TASTLMTIALAMKLGLAPFHFWVP 116
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 288558932 255 DVYEGSPTPVVAFLSVTSKVAALALATRIldipfyFSSNEWHLLLeILAILSMILGNLLAITQTSMKRMLAYSS 328
Cdd:MTH00105 117 EVTQGIPLSSGMILLTWQKLAPLSILYQI------SPSINPNLLL-TLAILSILIGGWGGLNQTQLRKILAYSS 183
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
76-329 |
2.01e-07 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 53.54 E-value: 2.01e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 76 LFRWREEPIISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIEcTEMAITEFLLFVLTATLGGMFLCGANDLITIFVA 155
Cdd:MTH00020 61 LWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMR-GDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIG 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 156 LECFSLCSYLLSGYTKRDLRSNEATMKYLLMGGASSSILVYGFSWLYGLSGgEIELQEIVNGLIntqMYNSPGISIALIF 235
Cdd:MTH00020 140 WEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFG-SLDFSSVFNMVV---SAPSSDITLICLF 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 236 ITVGLGFKLSLAPFHQWTPDVYEGsPTPVVAFLSVTSKVAAlALATRILDIPFYFSSNEWHLLLEILAILSMILGNLLAI 315
Cdd:MTH00020 216 LFIGAVGKSAQLGLHTWLPDAMEG-PTPVSALIHAATMVTA-GVFLLIRSSPLFEQAPLALIIVTIVGSLTVFFAATVGL 293
|
250
....*....|....
gi 288558932 316 TQTSMKRMLAYSSI 329
Cdd:MTH00020 294 VQNDLKKVIAYSTC 307
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
129-327 |
3.81e-07 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 52.67 E-value: 3.81e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 129 FLLFVLTATLGGMFlcgANDLITIFVALECFSLCSYLLSGYTKRDlRSNEATMKYLLMGGASSSILVYGFSWLYgLSGGE 208
Cdd:PRK06525 118 FLLLFIGAMAGLVY---SSTLLGLLLFFEITGLCSWALISYYQSP-KALRSALKALLITHIGSLGLYLAAATLF-LQTGT 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 209 IELQEIvNGLintqmyNSPGISIALIFITVGLGFKLSLAPFHQWTPDVYEGsPTPVVAFLSVTS--KVAALALATRILDI 286
Cdd:PRK06525 193 FALSAL-SGL------HGSLKYLVFLGILFAAWGKSAQLPFYSWLPDAMEA-PTPASAYLHAASmvKVGVYIFARAIQSM 264
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 288558932 287 PFYfsSNEWHLLLEILAILSMILGNLLAITQTSMKRMLAYS 327
Cdd:PRK06525 265 GPI--PHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYS 303
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
131-451 |
3.85e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 51.98 E-value: 3.85e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 131 LFVLTATLGGMFLCGANDLITIFVALEcFSLCSYLLSGYTKRDLRSNEATMKYLLMGGASSSILVYGFSWLYglsggeie 210
Cdd:MTH00197 2 LFLFIIFGGVLFSLSSSNWFLVWIGME-LNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSF-------- 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 211 lqeivnglintqmYNSPGISIALIFITVGLGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAALALATrildipfYF 290
Cdd:MTH00197 73 -------------SNLYLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILA-------FN 132
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 291 SSNEwhLLLEILAILSMILGNLLAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNdgyasMITYMLFYISMNLGTFaciv 370
Cdd:MTH00197 133 SSSF--MGLLICSVLSSLIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSI-----FMLYYLIYFVIMFMLF---- 201
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 371 LFGLRTGTDNIRDYAGLYMKDPFLALSLALCLLSLGGLPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVLSIYYYLKI 450
Cdd:MTH00197 202 LFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSL 281
|
.
gi 288558932 451 I 451
Cdd:MTH00197 282 A 282
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
136-329 |
4.04e-07 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 52.59 E-value: 4.04e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 136 ATLGGMFlcgANDLITIFVALECFSLCSYLL--SGYTKRDLRsneATMKYLLMGGASSSILVYGFSWLYgLSGGEIELqe 213
Cdd:PRK12668 105 SALGAVF---AGDLLTLFVFWELMAFTSTFLvwARGTKAAVR---AGFRYLLVHVLGGVLLLAGILLHY-AETGSFAF-- 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 214 ivnglinTQMYNSPGISIALIFItvGLGFKLSLAPFHQWTPDVY-EGSPTPVVaFLSV-TSKVAALALAtRIldipfyFS 291
Cdd:PRK12668 176 -------GAIAGLGGTAAWLILI--GFGVNAAFPPLHAWLPDAYpEATVTGSV-FLSAfTTKTAVYALA-RA------FP 238
|
170 180 190
....*....|....*....|....*....|....*...
gi 288558932 292 SNEwhLLLEILAILSmILGNLLAITQTSMKRMLAYSSI 329
Cdd:PRK12668 239 GTE--LLIYIGAAMA-VYGVFFALLENDLRRLLSYHIV 273
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
148-329 |
1.75e-06 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 50.79 E-value: 1.75e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 148 DLITIFVALECFSLCSYLLSGY-TKRDLRSNEATMKY---------LLMGgasssILvyGFSWlyglSGGEIELQEIVNG 217
Cdd:PRK07376 143 NLVQIYVFWELVGMCSYLLVGFwYDRKGAADAAQKAFvvnrvgdfgLLLG-----IL--GLFW----ATGSFDFDGIADR 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 218 LINTQMYNSPGISIALIF-ITVGLG--FKLSLAPFHQWTPDVYEGsPTPVVAFLSVTSKVAA-LALATRILdiPFYfssN 293
Cdd:PRK07376 212 LSELVSSGAVSGWLALLLcILVFLGpmAKSAQFPLHVWLPDAMEG-PTPISALIHAATMVAAgVFLVARMY--PVF---E 285
|
170 180 190
....*....|....*....|....*....|....*....
gi 288558932 294 EWHLLLEILAILSMI---LGNLLAITQTSMKRMLAYSSI 329
Cdd:PRK07376 286 QFPAVMTVIAWTGAItafLGASIALTQNDIKKGLAYSTI 324
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
87-451 |
9.77e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 47.89 E-value: 9.77e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 87 FSGNFQTNNFNEIFQFLI---LLCSTLCIP--LSVEYIECTemaiTEFLLFVLTATLGGMFLCGANDLITIFVALECFSL 161
Cdd:PRK06589 75 YSIGLHLEPLGLIFLLLIgflWICALLYTPkyLAINNIDSS----SRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTI 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 162 CSYLLSGYTKRDLrSNEATMKYLLMGGASSSILVygfswlygLSGGEIELQEIVNGLINTQMYNSPGISIALIFITVGLG 241
Cdd:PRK06589 151 STAFLIGHTRNNI-SLSGGYKYLKILMISALLLF--------LPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYGI 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 242 FKLSLAPFHQWTPDVYEgSPTPVVAFLSVTSKVAA-------LALATRILDI-PFYFSSNEWhllLEILAILSMILGNLL 313
Cdd:PRK06589 222 AKTAIFPVHSWLPAAMV-AHYPVSALLHAVIVVKTglfciykILLYIFGLSYlQRIFAEFNW---LIFIPIVSIFYSSLK 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 314 AITQTSMKRMLAYSSIgqigyviigiivgdSNDGYASMITYMLFYISMNLGT-------FACIVLFGL------RTGTDN 380
Cdd:PRK06589 298 ALKTDNIKKILAYSTI--------------SQLSLALLSAFILTPKALGAAIlhlvshsFAKICLFYSmgsiysLKKEDQ 363
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 288558932 381 IRDYAGLYMKDPFLALSLALCLLSLGGLPPLAGFFGKLYLFWCGWQAGL----YFLVSIGLLTSVLSIYYYLKII 451
Cdd:PRK06589 364 VDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQpwlsIIVMLVVIASSILSALYLLKIL 438
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
130-329 |
3.28e-05 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 45.93 E-value: 3.28e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 130 LLFVLTATLGGMFLCGANDLITIFVALEcFSLCSYLLSGYTKRDLRSNEATMKYLLMGGASSSILVYGFSWLYglsggei 209
Cdd:MTH00011 9 FLFSSTMTLGTLMALSSNNWLFLWMGME-LNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTMMW------- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 210 elqeivnglintqMYNSPGISIALIFITVGLGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAALAlatrildIPFY 289
Cdd:MTH00011 81 -------------SFPSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLS-------ILFF 140
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 288558932 290 FSSNEWHLLLEILAILSMILGNLLAITQTSMKRMLAYSSI 329
Cdd:MTH00011 141 FTSHNILPMMTSMAAMSALAGGLGGMNQTQLRPLLAYSSI 180
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
149-329 |
6.24e-04 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 42.57 E-value: 6.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 149 LITIFVALECFSLCSYLLSG--YTkRDLRSNeATMKY----------LLMGgasssILvyGFSWLYGlSGGEIELQEIVN 216
Cdd:CHL00025 144 LIQIYIFWELVGMCSYLLIGfwFT-RPIAAN-ACQKAfvtnrvgdfgLLLG-----IL--GFYWITG-SFEFRDLFEIFN 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 217 GLINTQMYNSPGISIALIFITVGLGFKLSLAPFHQWTPDVYEGsPTPVVAFLSVTSKVAA-LALATRIL----DIPFYFS 291
Cdd:CHL00025 214 NLIYNNEVNLLFATLCAFLLFLGPVAKSAQFPLHVWLPDAMEG-PTPISALIHAATMVAAgIFLVARLLplfiVIPYIMN 292
|
170 180 190
....*....|....*....|....*....|....*...
gi 288558932 292 SNEWhllleiLAILSMILGNLLAITQTSMKRMLAYSSI 329
Cdd:CHL00025 293 LISL------IGIITALLGATLALAQKDIKRGLAYSTM 324
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
226-328 |
1.40e-03 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 41.28 E-value: 1.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 226 SPGI-SIALIFITVGLGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTS---------KVAALALATRILDIpfyFSSnew 295
Cdd:PRK08676 201 SPSVlGASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVlnigiygilRLSALLRQSGAAEQ---FSN--- 274
|
90 100 110
....*....|....*....|....*....|...
gi 288558932 296 hlLLEILAILSMILGNLLAITQTSMKRMLAYSS 328
Cdd:PRK08676 275 --VLIGLGIFSIAVAAFSMLSQRNLKKLIAFSS 305
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
97-463 |
2.02e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 40.53 E-value: 2.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 97 NEIFQFLILLCSTLCIPLSVEYIECTEMAIteFLLFVLTATLGGMFLCGANDLITIFVALECFSLCSYLL--SGYTKRDL 174
Cdd:PRK06591 87 NLVLLFFLVFCHKITNQTILKYINNNRKSL--FYGILLFAHTGYLGMIATNDFFNLYVFIEISALSSYVLiaSGNNPKSL 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 175 RsneATMKYLLMGGASSSILVYGFSWLYGLSGgEIELQEIVNGLinTQMYNSPGISIALIFITVGLGFKLSLAPFHQWTP 254
Cdd:PRK06591 165 I---GAFDYLIMGSIGATLILIAIGFLLSITG-SLNMTDIAAYL--QEHTNSRIITIAIGFFLIGAILKTAFFPMHFWMM 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 255 DVYEGSPTPVVAFLSVTSKVAALALATRILDIPFYFSSNEWHL--LLEILAILSMILGNLLAITQTSMKRMLAYSSIGQI 332
Cdd:PRK06591 239 RAYNNTASVILVYLAGISTIIGIYIIYKFTYIIIGYETIKTAItnFIRPIALATLIIAPYFAYQAKNFKNIIIYSCFTQI 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 333 GYVIIGIivgdSNDGYASMITYMLFYISMNlgtfaCIVLFglrtgtdNIRDYAGLYMKDPfLALSLALCLLSLGGLPPLA 412
Cdd:PRK06591 319 GYVFLLY----VTENGIIILPSLLLADSIN-----KIALF-------LIDAYNESYKREP-NKVLIIIAIICSCGLPISP 381
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 288558932 413 GFFGKLYLFWCGWQAGLYFLVSIGLLTSVLSIYYYLKIIKLLMTgRNQEIT 463
Cdd:PRK06591 382 LFFIKVNILELLLTQNLLLDFIIILLSSVGSLFYHYKMVLLLFP-TKQESH 431
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
59-327 |
8.36e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 38.78 E-value: 8.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 59 WFYFISSTSLVISI------TALLFRWREEPIISFSGNFqTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLF 132
Cdd:MTH00211 37 LSFFISLIPLLIFLdqgletILTNWSWINLGLFSLNLSF-KFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKY 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 133 VLTATLGGMFLCGANDLITIFVALECFSLCSYLLSGYTKRDLRSNEATMKYLLMGGASSSILVYGFSWLyGLSGGEIELQ 212
Cdd:MTH00211 116 LLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVIYNRIGDIGLLLSMVWL-LLNLNSWEIS 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 288558932 213 EIvnglintqMYNSPGISIALIFITVGLGFKLSLAPFHQWTPDVYEGsPTPVVAFL-SVTSKVAALALATRILD-IPFYF 290
Cdd:MTH00211 195 QL--------FILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEG-PTPVSALLhSSTMVVAGVFLLIRLSPlFQNNQ 265
|
250 260 270
....*....|....*....|....*....|....*..
gi 288558932 291 SSNEWHLLleiLAILSMILGNLLAITQTSMKRMLAYS 327
Cdd:MTH00211 266 LILGAVLL---LGALTMLFGALCALTQNDIKKIVAFS 299
|
|
| |
