|
Name |
Accession |
Description |
Interval |
E-value |
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
399-888 |
1.27e-14 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 79.98 E-value: 1.27e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 399 PHTATSDPILDSVPPK-----------TSRTAEQPRATLAPSEASFDPRTVEIFTSPEVRPTTAAPQQTTSIPSTPKRQS 467
Cdd:PHA03247 2517 PAILPDEPVGEPVHPRmltwirgleelASDDAGDPPPPLPPAAPPAAPDRSVPPPRPAPRPSEPAVTSRARRPDAPPQSA 2596
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 468 TPKPPRVKPAPEPETRPSAQSTKAPPHKTKKPGRRRPKTTRSPEvPKSKPALEP-----ATVPPEILVPTIVPKPPQRPK 542
Cdd:PHA03247 2597 RPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDP-HPPPTVPPPerprdDPAPGRVSRPRRARRLGRAAQ 2675
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 543 ATRRPEAPQIQPAHEPVtfgseapalaivtttdiapvisrtkASVTTLA---PKSSRPRTRQRPKYKATPSPKIPQTK-- 617
Cdd:PHA03247 2676 ASSPPQRPRRRAARPTV-------------------------GSLTSLAdppPPPPTPEPAPHALVSATPLPPGPAAArq 2730
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 618 ---PADLGPITAEPSLASTTKKVRRPRPKPKTTPHPEVPQTILVPATSLEPVIrTETPGTTLVPKLSQQPD----FPHPK 690
Cdd:PHA03247 2731 aspALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRL-TRPAVASLSESRESLPSpwdpADPPA 2809
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 691 PKTTRSPAAPPTELVSTTVFEPVIPLKEDPVTTIVPFtdlEPATDLETPVA----FRTEAPRTTLASKKSQRTRRPRPRP 766
Cdd:PHA03247 2810 AVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPP---PPSLPLGGSVApggdVRRRPPSRSPAAKPAAPARPPVRRL 2886
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 767 PKATLSPQaPKTKTVPAVVLEPVTLRPEVQVTTLAPKKTQIKHRPRPKPKPIPSPEVAESKPVPTKEREPVTLRTESWVT 846
Cdd:PHA03247 2887 ARPAVSRS-TESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLG 2965
|
490 500 510 520
....*....|....*....|....*....|....*....|..
gi 1046853377 847 TKAPKTPKRTHRVRPKPKTTTPeAPLTKPVAATDLESSALST 888
Cdd:PHA03247 2966 ALVPGRVAVPRFRVPQPAPSRE-APASSTPPLTGHSLSRVSS 3006
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1311-1402 |
3.85e-10 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 57.89 E-value: 3.85e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 1311 NPPTNLTVVTVEgcPSFVILDWEKPLNDT--VTEYEVISRENGSFSGKNKSIQITNQTFSTVENLKPDTSYEFQVKPKNP 1388
Cdd:cd00063 2 SPPTNLRVTDVT--STSVTLSWTPPEDDGgpITGYVVEYREKGSGDWKEVEVTPGSETSYTLTGLKPGTEYEFRVRAVNG 79
|
90
....*....|....
gi 1046853377 1389 LGEGPASNTVAFST 1402
Cdd:cd00063 80 GGESPPSESVTVTT 93
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
659-1273 |
6.32e-08 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 58.03 E-value: 6.32e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 659 PATSLEPVIRTETPGttlvPKLSQQPDFPHPKPKTTRSPAAPPTElvstTVFEPVIP--------LKE-------DPvTT 723
Cdd:PHA03247 2483 PAEARFPFAAGAAPD----PGGGGPPDPDAPPAPSRLAPAILPDE----PVGEPVHPrmltwirgLEElasddagDP-PP 2553
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 724 IVPFTDLEPATDLETPVAfrTEAPRTT---LASKKSQRTRRPRPRPPKATLSPQAPKTKTVPAVVLEPVTLRPEVQVTTL 800
Cdd:PHA03247 2554 PLPPAAPPAAPDRSVPPP--RPAPRPSepaVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSP 2631
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 801 APKKTQikhRPRPKPKPIPSPEVAESKPVPTKEREPvtLRTESWVTTKAPKTPKRTHRVRPKPKTTTPEAPLTKPvaaTD 880
Cdd:PHA03247 2632 SPAANE---PDPHPPPTVPPPERPRDDPAPGRVSRP--RRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADP---PP 2703
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 881 LESSALSTEVPTTVVLTTALVPATLRTKSPKTTLAPSVQRTRRPRPRPKTTARTdvsesksvsddlelvafstESPQKTI 960
Cdd:PHA03247 2704 PPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARP-------------------ARPPTTA 2764
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 961 APRQTTSP--PPKLKPPHSRRPAkeqVPKGSLHTTSKPKMP-PSPEVVDITSVPKDEQLSHKPDPEVSQSETVLPPVTFR 1037
Cdd:PHA03247 2765 GPPAPAPPaaPAAGPPRRLTRPA---VASLSESRESLPSPWdPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPP 2841
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 1038 VEPPKTTIVPLETRDIPLIPVISPRPSEEELQTTMEQTDQSTQELFTTKIPRTTE---LAKTTQAPHRLHTTPVRPRIPE 1114
Cdd:PHA03247 2842 PPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTEsfaLPPDQPERPPQPQAPPPPQPQP 2921
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 1115 RPHGRPALNKTTTRPDRTKSRgmshkngVGPGTKQTPKPSSTGRNTSVDSHATrKPGLIPGTRHRHTSPRP-VPPQRKPL 1193
Cdd:PHA03247 2922 QPPPPPQPQPPPPPPPRPQPP-------LAPTTDPAGAGEPSGAVPQPWLGAL-VPGRVAVPRFRVPQPAPsREAPASST 2993
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 1194 PPNNVTGKPGSAGIISS----SRATSPP--LKATLKPTGTATerpgaEKKQPTAPASEEEFGNTTDFSSSPTKETDPLGK 1267
Cdd:PHA03247 2994 PPLTGHSLSRVSSWASSlalhEETDPPPvsLKQTLWPPDDTE-----DSDADSLFDSDSERSDLEALDPLPPEPHDPFAH 3068
|
....*.
gi 1046853377 1268 PRFIGP 1273
Cdd:PHA03247 3069 EPDPAT 3074
|
|
| FN3 |
smart00060 |
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1312-1392 |
1.15e-07 |
|
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 50.69 E-value: 1.15e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 1312 PPTNLTVVTVEgcPSFVILDWEKPLNDTVTEYEV-ISRENGSFSGKNKSIQITNQTFS-TVENLKPDTSYEFQVKPKNPL 1389
Cdd:smart00060 3 PPSNLRVTDVT--STSVTLSWEPPPDDGITGYIVgYRVEYREEGSEWKEVNVTPSSTSyTLTGLKPGTEYEFRVRAVNGA 80
|
...
gi 1046853377 1390 GEG 1392
Cdd:smart00060 81 GEG 83
|
|
| fn3 |
pfam00041 |
Fibronectin type III domain; |
1312-1395 |
1.42e-06 |
|
Fibronectin type III domain;
Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 47.79 E-value: 1.42e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 1312 PPTNLTVVTVEgcPSFVILDWEKP--LNDTVTEYEVISRENGSFSGKNkSIQITNQTFS-TVENLKPDTSYEFQVKPKNP 1388
Cdd:pfam00041 2 APSNLTVTDVT--STSLTVSWTPPpdGNGPITGYEVEYRPKNSGEPWN-EITVPGTTTSvTLTGLKPGTEYEVRVQAVNG 78
|
....*..
gi 1046853377 1389 LGEGPAS 1395
Cdd:pfam00041 79 GGEGPPS 85
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
337-720 |
8.32e-05 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 47.45 E-value: 8.32e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 337 SRSTKPTLASALDTAETALASSEEPWVV--PGAKTSEDSRVVQPRTATydvvsSSATSDETEVEPHTATSDPilDSVPPK 414
Cdd:pfam03154 141 NRSTSPSIPSPQDNESDSDSSAQQQILQtqPPVLQAQSGAASPPSPPP-----PGTTQAATAGPTPSAPSVP--PQGSPA 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 415 TSRTAEQPRATLAP-----SEASFDPRTVEIFTSP-EVRPTTAAPQQTTSIPSTPKRQSTPKPPR--------------V 474
Cdd:pfam03154 214 TSQPPNQTQSTAAPhtliqQTPTLHPQRLPSPHPPlQPMTQPPPPSQVSPQPLPQPSLHGQMPPMphslqtgpshmqhpV 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 475 KPAPEPETRPSAQSTKAPPHKTKKPGRRRPKTTRSPEVPKSKPALEPATVPpeiLVPTIVPKPPQRPKATRR-PEAPQIQ 553
Cdd:pfam03154 294 PPQPFPLTPQSSQSQVPPGPSPAAPGQSQQRIHTPPSQSQLQSQQPPREQP---LPPAPLSMPHIKPPPTTPiPQLPNPQ 370
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 554 PAHEPVTFGSEAPALaiVTTTDIAPVISRTKASVTTLAPKSSRPrtrqrPKYKATPSPKIPQTKPADLGPITAEPSLAST 633
Cdd:pfam03154 371 SHKHPPHLSGPSPFQ--MNSNLPPPPALKPLSSLSTHHPPSAHP-----PPLQLMPQSQQLPPPPAQPPVLTQSQSLPPP 443
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 634 TKKVRRPRPKPKTTPHPEVPQTILVPATSlEPVIRTETPGTtlvpklSQQPDFPHPKPKTTRSPAAPPTELVSTTVFEPV 713
Cdd:pfam03154 444 AASHPPTSGLHQVPSQSPFPQHPFVPGGP-PPITPPSGPPT------STSSAMPGIQPPSSASVSSSGPVPAAVSCPLPP 516
|
....*..
gi 1046853377 714 IPLKEDP 720
Cdd:pfam03154 517 VQIKEEA 523
|
|
| fn3 |
pfam00041 |
Fibronectin type III domain; |
116-195 |
1.50e-04 |
|
Fibronectin type III domain;
Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 42.02 E-value: 1.50e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 116 KPLQLVVGTLTPSSVFLSWgflinphhdwTLPSHCSSD-RFYTIRYREKDKEKKWIFQLCPATET--IVENLKPNTVYEF 192
Cdd:pfam00041 2 APSNLTVTDVTSTSLTVSW----------TPPPDGNGPiTGYEVEYRPKNSGEPWNEITVPGTTTsvTLTGLKPGTEYEV 71
|
...
gi 1046853377 193 GVK 195
Cdd:pfam00041 72 RVQ 74
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
444-654 |
2.11e-04 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 45.92 E-value: 2.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 444 PEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQSTKAPPHKTKKPGRRRPKTTRSPEVPKSKPALEPAT 523
Cdd:NF033839 292 PSAPKPGMQPSPQPEKKEVKPEPETPKPEVKPQLEKPKPEVKPQPEKPKPEVKPQLETPKPEVKPQPEKPKPEVKPQPEK 371
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 524 VPPEILVPTIVPKPPQRPKatrrPEAPQIQPAHEPVTFGSEapalaivtttdIAPVISRTKASVTTLAPKSSRPRTRQRP 603
Cdd:NF033839 372 PKPEVKPQPETPKPEVKPQ----PEKPKPEVKPQPEKPKPE-----------VKPQPEKPKPEVKPQPEKPKPEVKPQPE 436
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 1046853377 604 KYKATPSPKIPQTKPAdlgpITAEPSLASTTKKVRRPRPKPKTTPHPEVPQ 654
Cdd:NF033839 437 KPKPEVKPQPEKPKPE----VKPQPETPKPEVKPQPEKPKPEVKPQPEKPK 483
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
429-804 |
2.36e-04 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 45.53 E-value: 2.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 429 SEASFDPRTVEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTP--KPPRVKPAPEPETRPSAQSTKAPPHKTKKPGRRRP-- 504
Cdd:NF033839 153 SGSSTKPETPQPENPEHQKPTTPAPDTKPSPQPEGKKPSVPdiNQEKEKAKLAVATYMSKILDDIQKHHLQKEKHRQIva 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 505 --------KTTRSPEVPKSKPALEPATVPPEILVPTI-------------VPKPPQRPKatrrPEAPQIQPAHEPVTFGS 563
Cdd:NF033839 233 likeldelKKQALSEIDNVNTKVEIENTVHKIFADMDavvtkfkkgltqdTPKEPGNKK----PSAPKPGMQPSPQPEKK 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 564 EAPALAIVTTTDIAPVISRTKASVTTL--APKSSRPRTRQRPKYKATPSPKI--PQTKPADLGP---ITAEPSLASTTKK 636
Cdd:NF033839 309 EVKPEPETPKPEVKPQLEKPKPEVKPQpeKPKPEVKPQLETPKPEVKPQPEKpkPEVKPQPEKPkpeVKPQPETPKPEVK 388
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 637 VRRPRPKPKTTPHPEVPQTILVPATSLEpviRTETPGTTLVPKLSQQPDFPHPKPKTTRSPAAPPTELVSttvfEPVIPL 716
Cdd:NF033839 389 PQPEKPKPEVKPQPEKPKPEVKPQPEKP---KPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKP----QPETPK 461
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 717 KEDPVTTIVPFTDLEPATDLETPVAFRTEA----PRTTLASKKSQRTRRPRPRPPKATLSPQA--PKTKTVPAVVLEPVT 790
Cdd:NF033839 462 PEVKPQPEKPKPEVKPQPEKPKPDNSKPQAddkkPSTPNNLSKDKQPSNQASTNEKATNKPKKslPSTGSISNLALEIAG 541
|
410
....*....|....
gi 1046853377 791 LRPEVQVTTLAPKK 804
Cdd:NF033839 542 LLTLAGATILAKKR 555
|
|
| FN3 |
COG3401 |
Fibronectin type 3 domain [General function prediction only]; |
1153-1407 |
2.73e-04 |
|
Fibronectin type 3 domain [General function prediction only];
Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 45.38 E-value: 2.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 1153 PSSTGRNTSVDSHATRKPGLIPGTRHRHTSPRPVPPQRKPLPPNNVTGKPGSAGIISSSRATSPPLKATLKPTGTATERP 1232
Cdd:COG3401 73 AGTTSGVAAVAVAAAPPTATGLTTLTGSGSVGGATNTGLTSSDEVPSPAVGTATTATAVAGGAATAGTYALGAGLYGVDG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 1233 GAEKKQPTAPASEEEFGNTTDFSSSPTKETDPLGKPRFIGPHVRYIPKPDN----KPCSITDSVRRFPTEEATEGNATSP 1308
Cdd:COG3401 153 ANASGTTASSVAGAGVVVSPDTSATAAVATTSLTVTSTTLVDGGGDIEPGTtyyyRVAATDTGGESAPSNEVSVTTPTTP 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 1309 PqNPPTNLTVVTVEgcPSFVILDWEKPLNDTVTEYEvISRENGSfSGKNKSIQITNQTFSTVENLKPDTSYEFQVKPKNP 1388
Cdd:COG3401 233 P-SAPTGLTATADT--PGSVTLSWDPVTESDATGYR-VYRSNSG-DGPFTKVATVTTTSYTDTGLTNGTTYYYRVTAVDA 307
|
250 260
....*....|....*....|
gi 1046853377 1389 LG-EGPASNTVAFSTESADP 1407
Cdd:COG3401 308 AGnESAPSNVVSVTTDLTPP 327
|
|
| FN3 |
COG3401 |
Fibronectin type 3 domain [General function prediction only]; |
1296-1450 |
5.35e-04 |
|
Fibronectin type 3 domain [General function prediction only];
Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 44.61 E-value: 5.35e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 1296 PTEEATEGNATSPPQnPPTNLTVVTVEgcPSFVILDWEKPLNDTVTEYEV--ISRENGSFSGKNKSIqitNQTFSTVENL 1373
Cdd:COG3401 314 PSNVVSVTTDLTPPA-APSGLTATAVG--SSSITLSWTASSDADVTGYNVyrSTSGGGTYTKIAETV---TTTSYTDTGL 387
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1046853377 1374 KPDTSYEFQVKPKNPLG-EGPASNTVAFSTESADPRVSEPISAGRDAIWTERPFNSDSYSECKGKQYVKRTWYKKFVG 1450
Cdd:COG3401 388 TPGTTYYYKVTAVDAAGnESAPSEEVSATTASAASGESLTASVDAVPLTDVAGATAAASAASNPGVSAAVLADGGDTG 465
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
413-587 |
7.04e-04 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 43.99 E-value: 7.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 413 PKTSRTAEQPRATLAPSEASFDPrtvEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPpRVKPAPE-PETRPSAQSTKA 491
Cdd:NF033839 308 KEVKPEPETPKPEVKPQLEKPKP---EVKPQPEKPKPEVKPQLETPKPEVKPQPEKPKP-EVKPQPEkPKPEVKPQPETP 383
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 492 PPHKTKKPGRRRPKTTRSPEVPKSKPALEPATVPPEILVPTIVPKPPQRPKatrrPEAPQIQPAHEPVTFGSEAPALAIV 571
Cdd:NF033839 384 KPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQ----PEKPKPEVKPQPEKPKPEVKPQPET 459
|
170
....*....|....*.
gi 1046853377 572 TTTDIAPVISRTKASV 587
Cdd:NF033839 460 PKPEVKPQPEKPKPEV 475
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
116-195 |
1.54e-03 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 39.40 E-value: 1.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 116 KPLQLVVGTLTPSSVFLSWgfliNPHHDWTLPSHcssdrFYTIRYREKDKE--KKWIFQLCPATETIVENLKPNTVYEFG 193
Cdd:cd00063 3 PPTNLRVTDVTSTSVTLSW----TPPEDDGGPIT-----GYVVEYREKGSGdwKEVEVTPGSETSYTLTGLKPGTEYEFR 73
|
..
gi 1046853377 194 VK 195
Cdd:cd00063 74 VR 75
|
|
| FN3 |
smart00060 |
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
117-195 |
2.80e-03 |
|
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 38.36 E-value: 2.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 117 PLQLVVGTLTPSSVFLSWgflinphhdwtLPSHCSSDRFYTIRYREKDKEKKWIFQLCPA----TETIVENLKPNTVYEF 192
Cdd:smart00060 4 PSNLRVTDVTSTSVTLSW-----------EPPPDDGITGYIVGYRVEYREEGSEWKEVNVtpssTSYTLTGLKPGTEYEF 72
|
...
gi 1046853377 193 GVK 195
Cdd:smart00060 73 RVR 75
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
399-888 |
1.27e-14 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 79.98 E-value: 1.27e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 399 PHTATSDPILDSVPPK-----------TSRTAEQPRATLAPSEASFDPRTVEIFTSPEVRPTTAAPQQTTSIPSTPKRQS 467
Cdd:PHA03247 2517 PAILPDEPVGEPVHPRmltwirgleelASDDAGDPPPPLPPAAPPAAPDRSVPPPRPAPRPSEPAVTSRARRPDAPPQSA 2596
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 468 TPKPPRVKPAPEPETRPSAQSTKAPPHKTKKPGRRRPKTTRSPEvPKSKPALEP-----ATVPPEILVPTIVPKPPQRPK 542
Cdd:PHA03247 2597 RPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDP-HPPPTVPPPerprdDPAPGRVSRPRRARRLGRAAQ 2675
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 543 ATRRPEAPQIQPAHEPVtfgseapalaivtttdiapvisrtkASVTTLA---PKSSRPRTRQRPKYKATPSPKIPQTK-- 617
Cdd:PHA03247 2676 ASSPPQRPRRRAARPTV-------------------------GSLTSLAdppPPPPTPEPAPHALVSATPLPPGPAAArq 2730
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 618 ---PADLGPITAEPSLASTTKKVRRPRPKPKTTPHPEVPQTILVPATSLEPVIrTETPGTTLVPKLSQQPD----FPHPK 690
Cdd:PHA03247 2731 aspALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRL-TRPAVASLSESRESLPSpwdpADPPA 2809
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 691 PKTTRSPAAPPTELVSTTVFEPVIPLKEDPVTTIVPFtdlEPATDLETPVA----FRTEAPRTTLASKKSQRTRRPRPRP 766
Cdd:PHA03247 2810 AVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPP---PPSLPLGGSVApggdVRRRPPSRSPAAKPAAPARPPVRRL 2886
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 767 PKATLSPQaPKTKTVPAVVLEPVTLRPEVQVTTLAPKKTQIKHRPRPKPKPIPSPEVAESKPVPTKEREPVTLRTESWVT 846
Cdd:PHA03247 2887 ARPAVSRS-TESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLG 2965
|
490 500 510 520
....*....|....*....|....*....|....*....|..
gi 1046853377 847 TKAPKTPKRTHRVRPKPKTTTPeAPLTKPVAATDLESSALST 888
Cdd:PHA03247 2966 ALVPGRVAVPRFRVPQPAPSRE-APASSTPPLTGHSLSRVSS 3006
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
279-702 |
5.77e-12 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 71.12 E-value: 5.77e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 279 PGLNDSTVKLPSSIMLEISDALKAQLAKNETLALPAESKTPEVEK----VAGQPVTVTPETVSRSTKPTLASALDTAETA 354
Cdd:PHA03247 2561 PAAPDRSVPPPRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRgdprGPAPPSPLPPDTHAPDPPPPSPSPAANEPDP 2640
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 355 LASSEEPWVVPGAKTSEDSRVVQPRTATYDVVSSSATSD---------ETEVEPHTATSDPILDSVPPKTSRTAEQPRAT 425
Cdd:PHA03247 2641 HPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPpqrprrraaRPTVGSLTSLADPPPPPPTPEPAPHALVSATP 2720
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 426 LAPSEASFDPRTVEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQSTKAPPHKTKkpgrrrPK 505
Cdd:PHA03247 2721 LPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLS------ES 2794
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 506 TTRSPEVPKSKPALEPATVPPEILVPTIVPKPPQRPKATRRPEAPQIQPAHEPVTF---GSEAPALAIVTTTDIAPVISR 582
Cdd:PHA03247 2795 RESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLplgGSVAPGGDVRRRPPSRSPAAK 2874
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 583 TKASVTTLAPKSSRPRTRQRPKYKATPSPKIPQTKPADLGPitaEPSLASTTKKVRRPRPKPKTTPHPE---VPQTILVP 659
Cdd:PHA03247 2875 PAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPP---PPQPQPQPPPPPQPQPPPPPPPRPQpplAPTTDPAG 2951
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 1046853377 660 ATSLEPVIRTETPGtTLVPKLSQQPDFPHPKPKTTRSPAAPPT 702
Cdd:PHA03247 2952 AGEPSGAVPQPWLG-ALVPGRVAVPRFRVPQPAPSREAPASST 2993
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
406-702 |
1.34e-11 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 69.72 E-value: 1.34e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 406 PILDSVPPKTSRTAEQPRATLAPSEASFDPRTVEIFTSPEV-----RPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEp 480
Cdd:PTZ00449 514 PEASGLPPKAPGDKEGEEGEHEDSKESDEPKEGGKPGETKEgevgkKPGPAKEHKPSKIPTLSKKPEFPKDPKHPKDPE- 592
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 481 etrpSAQSTKAPPHKTKKPGRRRPKTTRSPEVPKSKPALEPATVPPEilvptivPKPPQRPKATRRPEAPQI-----QPA 555
Cdd:PTZ00449 593 ----EPKKPKRPRSAQRPTRPKSPKLPELLDIPKSPKRPESPKSPKR-------PPPPQRPSSPERPEGPKIikspkPPK 661
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 556 HEPVTFGseaPALAIVTTTDIAPVISRTKASVTTLAPKSSrprTRQRPKYKATPSPKIPQTKPADLGPI--TAEPSLAST 633
Cdd:PTZ00449 662 SPKPPFD---PKFKEKFYDDYLDAAAKSKETKTTVVLDES---FESILKETLPETPGTPFTTPRPLPPKlpRDEEFPFEP 735
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1046853377 634 TKKVRRPRPKPKTTPHPEVPQTILV---PATSLEPVIRTETPGTTLVPKLSQQPDFPHPKPK--TTRSPAAPPT 702
Cdd:PTZ00449 736 IGDPDAEQPDDIEFFTPPEEERTFFhetPADTPLPDILAEEFKEEDIHAETGEPDEAMKRPDspSEHEDKPPGD 809
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
469-726 |
1.44e-11 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 69.72 E-value: 1.44e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 469 PKPPRVKPAPEPETRPSAQSTKAPPHKtkkpgrrRPKTTRSPEVPKsKPALEPATVPPEILVPTIVPKPPQRPKATRRPE 548
Cdd:PTZ00449 521 PKAPGDKEGEEGEHEDSKESDEPKEGG-------KPGETKEGEVGK-KPGPAKEHKPSKIPTLSKKPEFPKDPKHPKDPE 592
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 549 APQIQPAHEPVTFGSEAPALAIVTTTDIAPVISRTKASVTTLAPKS-SRPRTRQRPKYKATP-SPKIPQTKPADLGPITA 626
Cdd:PTZ00449 593 EPKKPKRPRSAQRPTRPKSPKLPELLDIPKSPKRPESPKSPKRPPPpQRPSSPERPEGPKIIkSPKPPKSPKPPFDPKFK 672
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 627 EPSLASTTKKVRRPRPKPKTTPHPEVPQTILVPATSLEPVIRTETPgTTLVPKLSQQPDFPHPKPKTTRSPAAPPTELVS 706
Cdd:PTZ00449 673 EKFYDDYLDAAAKSKETKTTVVLDESFESILKETLPETPGTPFTTP-RPLPPKLPRDEEFPFEPIGDPDAEQPDDIEFFT 751
|
250 260
....*....|....*....|
gi 1046853377 707 TTVFEPVIpLKEDPVTTIVP 726
Cdd:PTZ00449 752 PPEEERTF-FHETPADTPLP 770
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
499-1062 |
2.39e-11 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 69.20 E-value: 2.39e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 499 PGRRRPKTTRSPEVPKSKPalEPATVPPEilvPTIVPKPPQRPKATRRPEAPQIQPAHEPV-TFGSEAPALAIVTTTDIA 577
Cdd:PHA03247 2478 PVYRRPAEARFPFAAGAAP--DPGGGGPP---DPDAPPAPSRLAPAILPDEPVGEPVHPRMlTWIRGLEELASDDAGDPP 2552
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 578 PVI------SRTKASVTT--LAPKSSRPRTRQRP-KYKATPSPKIPQTKPADLGPITAEPSLASTTKKVRRPRPKPKT-T 647
Cdd:PHA03247 2553 PPLppaappAAPDRSVPPprPAPRPSEPAVTSRArRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSpS 2632
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 648 PHP-EVPQTILVPATSLEPVIRTETPGTTLVPKLSQ---QPDFPHPKPKTTRSPAAPPTELVSTTVFEPVIPLK--EDPV 721
Cdd:PHA03247 2633 PAAnEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARrlgRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPtpEPAP 2712
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 722 TTIVPFTDLEPAtdletPVAFRTEAPRTTLAskksqrtrRPRPRPPKATLSPQAPKTKTVPAVVLEPVTLRPEVQVTTLA 801
Cdd:PHA03247 2713 HALVSATPLPPG-----PAAARQASPALPAA--------PAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGP 2779
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 802 PKKTqikhRPRPKPKPIPSPEVAESKPVPTKEREPVTLRTESWVTTKAPKTPKrthrvrPKPKTTTPEAPLTKPvaatdl 881
Cdd:PHA03247 2780 PRRL----TRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPL------PPPTSAQPTAPPPPP------ 2843
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 882 essalsTEVPTTVVLTTALVPATLRTKSPkTTLAPSVQRTRRPRPRPKTTARTDVSESksvsddlelvafsTESpqKTIA 961
Cdd:PHA03247 2844 ------GPPPPSLPLGGSVAPGGDVRRRP-PSRSPAAKPAAPARPPVRRLARPAVSRS-------------TES--FALP 2901
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 962 PRQTTSPPPKLKPPHSRRPAKEQVPKGSLHTTSKPKMPPSPEVVDITSVPKDEQLSHKPDPEVSQSETVLPPVTFRVEPP 1041
Cdd:PHA03247 2902 PDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQ 2981
|
570 580
....*....|....*....|.
gi 1046853377 1042 kttivPLETRDIPLIPVISPR 1062
Cdd:PHA03247 2982 -----PAPSREAPASSTPPLT 2997
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1311-1402 |
3.85e-10 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 57.89 E-value: 3.85e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 1311 NPPTNLTVVTVEgcPSFVILDWEKPLNDT--VTEYEVISRENGSFSGKNKSIQITNQTFSTVENLKPDTSYEFQVKPKNP 1388
Cdd:cd00063 2 SPPTNLRVTDVT--STSVTLSWTPPEDDGgpITGYVVEYREKGSGDWKEVEVTPGSETSYTLTGLKPGTEYEFRVRAVNG 79
|
90
....*....|....
gi 1046853377 1389 LGEGPASNTVAFST 1402
Cdd:cd00063 80 GGESPPSESVTVTT 93
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
309-604 |
6.27e-08 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 58.03 E-value: 6.27e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 309 TLALPAESKTPEVEKVAGQPVTVTPETVSRSTKPTLASALDTAETALASSEEPWVVPgaktsedsrvvqPRTATYDVVSS 388
Cdd:PHA03247 2756 RPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVL------------APAAALPPAAS 2823
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 389 SATSdetevEPHTATSDPILDSVPPKTSRTAEQPRATLAPSeASFDPRtveiftspevrpttAAPQQTTSIPSTPKRqst 468
Cdd:PHA03247 2824 PAGP-----LPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPG-GDVRRR--------------PPSRSPAAKPAAPAR--- 2880
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 469 pkpPRVKPAPEPETRPSAQSTKAPPhktkkPGRRRPKTTRSPEVPKSKPALEPATVPPEILVPTIVPKPPQRPKATRRPe 548
Cdd:PHA03247 2881 ---PPVRRLARPAVSRSTESFALPP-----DQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAG- 2951
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1046853377 549 APQIQPAHEPVTFGSEAPALAIVTTTDIAPvisrTKASVTTLAPKSSRPRTRQRPK 604
Cdd:PHA03247 2952 AGEPSGAVPQPWLGALVPGRVAVPRFRVPQ----PAPSREAPASSTPPLTGHSLSR 3003
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
659-1273 |
6.32e-08 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 58.03 E-value: 6.32e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 659 PATSLEPVIRTETPGttlvPKLSQQPDFPHPKPKTTRSPAAPPTElvstTVFEPVIP--------LKE-------DPvTT 723
Cdd:PHA03247 2483 PAEARFPFAAGAAPD----PGGGGPPDPDAPPAPSRLAPAILPDE----PVGEPVHPrmltwirgLEElasddagDP-PP 2553
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 724 IVPFTDLEPATDLETPVAfrTEAPRTT---LASKKSQRTRRPRPRPPKATLSPQAPKTKTVPAVVLEPVTLRPEVQVTTL 800
Cdd:PHA03247 2554 PLPPAAPPAAPDRSVPPP--RPAPRPSepaVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSP 2631
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 801 APKKTQikhRPRPKPKPIPSPEVAESKPVPTKEREPvtLRTESWVTTKAPKTPKRTHRVRPKPKTTTPEAPLTKPvaaTD 880
Cdd:PHA03247 2632 SPAANE---PDPHPPPTVPPPERPRDDPAPGRVSRP--RRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADP---PP 2703
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 881 LESSALSTEVPTTVVLTTALVPATLRTKSPKTTLAPSVQRTRRPRPRPKTTARTdvsesksvsddlelvafstESPQKTI 960
Cdd:PHA03247 2704 PPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARP-------------------ARPPTTA 2764
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 961 APRQTTSP--PPKLKPPHSRRPAkeqVPKGSLHTTSKPKMP-PSPEVVDITSVPKDEQLSHKPDPEVSQSETVLPPVTFR 1037
Cdd:PHA03247 2765 GPPAPAPPaaPAAGPPRRLTRPA---VASLSESRESLPSPWdPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPP 2841
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 1038 VEPPKTTIVPLETRDIPLIPVISPRPSEEELQTTMEQTDQSTQELFTTKIPRTTE---LAKTTQAPHRLHTTPVRPRIPE 1114
Cdd:PHA03247 2842 PPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTEsfaLPPDQPERPPQPQAPPPPQPQP 2921
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 1115 RPHGRPALNKTTTRPDRTKSRgmshkngVGPGTKQTPKPSSTGRNTSVDSHATrKPGLIPGTRHRHTSPRP-VPPQRKPL 1193
Cdd:PHA03247 2922 QPPPPPQPQPPPPPPPRPQPP-------LAPTTDPAGAGEPSGAVPQPWLGAL-VPGRVAVPRFRVPQPAPsREAPASST 2993
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 1194 PPNNVTGKPGSAGIISS----SRATSPP--LKATLKPTGTATerpgaEKKQPTAPASEEEFGNTTDFSSSPTKETDPLGK 1267
Cdd:PHA03247 2994 PPLTGHSLSRVSSWASSlalhEETDPPPvsLKQTLWPPDDTE-----DSDADSLFDSDSERSDLEALDPLPPEPHDPFAH 3068
|
....*.
gi 1046853377 1268 PRFIGP 1273
Cdd:PHA03247 3069 EPDPAT 3074
|
|
| FN3 |
smart00060 |
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1312-1392 |
1.15e-07 |
|
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 50.69 E-value: 1.15e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 1312 PPTNLTVVTVEgcPSFVILDWEKPLNDTVTEYEV-ISRENGSFSGKNKSIQITNQTFS-TVENLKPDTSYEFQVKPKNPL 1389
Cdd:smart00060 3 PPSNLRVTDVT--STSVTLSWEPPPDDGITGYIVgYRVEYREEGSEWKEVNVTPSSTSyTLTGLKPGTEYEFRVRAVNGA 80
|
...
gi 1046853377 1390 GEG 1392
Cdd:smart00060 81 GEG 83
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
279-620 |
2.09e-07 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 55.86 E-value: 2.09e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 279 PGLNDSTVKLPSSimleisdALKAQLAKNETLALPAESKTPEVEKVAGQPVTVTPeTVSRSTKPtlasALDTAETALASS 358
Cdd:PRK10263 309 PLLNGAPITEPVA-------VAAAATTATQSWAAPVEPVTQTPPVASVDVPPAQP-TVAWQPVP----GPQTGEPVIAPA 376
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 359 EEPW------VVPGAKTSEDSRVVQPRTATYDVVSSSATSDETEVEPHTATSDPILDSVPPKTSRTAEQPRATlAPSEAS 432
Cdd:PRK10263 377 PEGYpqqsqyAQPAVQYNEPLQQPVQPQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQA-EEQQST 455
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 433 FDPRTVEIFTSPEVRPTTAAPQQTtsipstpKRQSTPKPPRVKPAPE-PETRPSAQSTKAPPHKTKKPGRRRPKTTRSPE 511
Cdd:PRK10263 456 FAPQSTYQTEQTYQQPAAQEPLYQ-------QPQPVEQQPVVEPEPVvEETKPARPPLYYFEEVEEKRAREREQLAAWYQ 528
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 512 vPKSKPALEPATVPPEILVPTIVPKPPQRPKATRRPEAPQIQPA--HEPVTFGSEAPALAIVTTTDIAPvisRTKASVTT 589
Cdd:PRK10263 529 -PIPEPVKEPEPIKSSLKAPSVAAVPPVEAAAAVSPLASGVKKAtlATGAAATVAAPVFSLANSGGPRP---QVKEGIGP 604
|
330 340 350
....*....|....*....|....*....|.
gi 1046853377 590 LAPKSSRPRTRQRpKYKATPSPKIPQTKPAD 620
Cdd:PRK10263 605 QLPRPKRIRVPTR-RELASYGIKLPSQRAAE 634
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
398-721 |
3.29e-07 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 55.24 E-value: 3.29e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 398 EPHTATSDPILDSVPPKTSRTAEQPRATLAPSEASFDprtveiftSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPA 477
Cdd:PRK07003 359 EPAVTGGGAPGGGVPARVAGAVPAPGARAAAAVGASA--------VPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAP 430
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 478 PEPETRPSAQSTKAPPHKTKKPGrrrpkttrSPEVPKSKPALEPATVPPEILVPTIVPKPPQRPKATRRPEAPQIQPAHE 557
Cdd:PRK07003 431 APPATADRGDDAADGDAPVPAKA--------NARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAA 502
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 558 PVTFGSEAPALAIVTTTDIAPVISRTKASVTTLAPKSSRPRTRQ-----------------------------RPKYKAT 608
Cdd:PRK07003 503 TPAAVPDARAPAAASREDAPAAAAPPAPEARPPTPAAAAPAARAggaaaaldvlrnagmrvssdrgaraaaaaKPAAAPA 582
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 609 PSPKIPQTKPADLGPITAEPSLASTTKKVRRPR-PKPKTTPHP-----EVPQTILVPATSLEPVIrteTPGTTLVPKLSQ 682
Cdd:PRK07003 583 AAPKPAAPRVAVQVPTPRARAATGDAPPNGAARaEQAAESRGApppweDIPPDDYVPLSADEGFG---GPDDGFVPVFDS 659
|
330 340 350
....*....|....*....|....*....|....*....
gi 1046853377 683 QPDFPHPKPKTTRSPAAPptelVSTTVFEPVIPLkeDPV 721
Cdd:PRK07003 660 GPDDVRVAPKPADAPAPP----VDTRPLPPAIPL--DAI 692
|
|
| fn3 |
pfam00041 |
Fibronectin type III domain; |
1312-1395 |
1.42e-06 |
|
Fibronectin type III domain;
Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 47.79 E-value: 1.42e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 1312 PPTNLTVVTVEgcPSFVILDWEKP--LNDTVTEYEVISRENGSFSGKNkSIQITNQTFS-TVENLKPDTSYEFQVKPKNP 1388
Cdd:pfam00041 2 APSNLTVTDVT--STSLTVSWTPPpdGNGPITGYEVEYRPKNSGEPWN-EITVPGTTTSvTLTGLKPGTEYEVRVQAVNG 78
|
....*..
gi 1046853377 1389 LGEGPAS 1395
Cdd:pfam00041 79 GGEGPPS 85
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
435-647 |
3.04e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 51.80 E-value: 3.04e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 435 PRTVEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQS--TKAPPHKTKKPGRRRPKTTRSPEV 512
Cdd:PRK12323 374 PATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSpaPEALAAARQASARGPGGAPAPAPA 453
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 513 PKSKP--ALEPATVPPEILVPTIVPKPPQRPKATRRPEAPQIQPAHE--PVTFGSEAPAlaivtttDIAPvisrtkASVT 588
Cdd:PRK12323 454 PAAAPaaAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEelPPEFASPAPA-------QPDA------APAG 520
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1046853377 589 TLAPKSSRPRTRQRPKYKATPSPKiPQTKPADLGPITAEPSLASTTKKVRRPRPKPKTT 647
Cdd:PRK12323 521 WVAESIPDPATADPDDAFETLAPA-PAAAPAPRAAAATEPVVAPRPPRASASGLPDMFD 578
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
400-654 |
9.28e-06 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 50.46 E-value: 9.28e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 400 HTATSDPILDSVP-----PKTSRTAEQPRATLAPSEASfdprtveiftSPEVRPTTAAPQqTTSIPSTPKRQSTPKPPRV 474
Cdd:PTZ00449 567 HKPSKIPTLSKKPefpkdPKHPKDPEEPKKPKRPRSAQ----------RPTRPKSPKLPE-LLDIPKSPKRPESPKSPKR 635
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 475 KPAPE-------PETRPSAQSTKaPPHKTKKP----------------GRRRPKTTRSPEVPKSKPALEPATVPPEILVP 531
Cdd:PTZ00449 636 PPPPQrpssperPEGPKIIKSPK-PPKSPKPPfdpkfkekfyddyldaAAKSKETKTTVVLDESFESILKETLPETPGTP 714
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 532 TIVPK--PPQRPkatRRPEAPqiqpaHEPVTfgseapalaivtttdiAPVISRTKASVTTLAPKSSRPRTRQRPKYKATP 609
Cdd:PTZ00449 715 FTTPRplPPKLP---RDEEFP-----FEPIG----------------DPDAEQPDDIEFFTPPEEERTFFHETPADTPLP 770
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 1046853377 610 SPKIPQTKPADLGPITAEPSLAstTKKVRRPRPKPKTTP--HPEVPQ 654
Cdd:PTZ00449 771 DILAEEFKEEDIHAETGEPDEA--MKRPDSPSEHEDKPPgdHPSLPK 815
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
399-599 |
9.92e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 50.26 E-value: 9.92e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 399 PHTATSDPILDSVPPKTSRTAEQPRATLAPSEASFDPRTVEIFTSPEVRPTTAAPQ----QTTSIPSTPKRQSTPKP-PR 473
Cdd:PRK12323 374 PATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPApealAAARQASARGPGGAPAPaPA 453
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 474 VKPAPEPETRPSAQSTKAPPHKTKKPGRRRPKTTRSPEVPKSKPALE--PATVPPEILVPTIVPKPPQRPKATRRPEAPQ 551
Cdd:PRK12323 454 PAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEelPPEFASPAPAQPDAAPAGWVAESIPDPATAD 533
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1046853377 552 IQPAHEPVTfgsEAPALAIVTTTDIAPvisrtKASVTTLAPKSSRPRT 599
Cdd:PRK12323 534 PDDAFETLA---PAPAAAPAPRAAAAT-----EPVVAPRPPRASASGL 573
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
405-697 |
1.40e-05 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 50.08 E-value: 1.40e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 405 DPILD--SVPPKTSRTAEQPRAT---LAPSEASFDPRTVEIFTSPEVRPTTAapQQTTSIPSTPKRQSTPKPPRVKPAP- 478
Cdd:PRK10263 308 DPLLNgaPITEPVAVAAAATTATqswAAPVEPVTQTPPVASVDVPPAQPTVA--WQPVPGPQTGEPVIAPAPEGYPQQSq 385
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 479 ---------EPETRPsAQSTKAPPHKTKKPGRRRPKTTRSPEVPKSKPALEPATVPPEILVPTIV--PKPPQRPKATRRP 547
Cdd:PRK10263 386 yaqpavqynEPLQQP-VQPQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAeeQQSTFAPQSTYQT 464
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 548 EAPQIQPAHEPVTFgSEAPALAIVTTTDIAPVISRTKASVTTL------APKSSRPRTRQRPKYKATPSP---------K 612
Cdd:PRK10263 465 EQTYQQPAAQEPLY-QQPQPVEQQPVVEPEPVVEETKPARPPLyyfeevEEKRAREREQLAAWYQPIPEPvkepepiksS 543
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 613 IPQTKPADLGPITAEPSLASTTKKVRrprpkpKTTPHPEVPQTILVPATSLepvirteTPGTTLVPKLSQQPDFPHPKPK 692
Cdd:PRK10263 544 LKAPSVAAVPPVEAAAAVSPLASGVK------KATLATGAAATVAAPVFSL-------ANSGGPRPQVKEGIGPQLPRPK 610
|
....*
gi 1046853377 693 TTRSP 697
Cdd:PRK10263 611 RIRVP 615
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
313-555 |
1.80e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 49.46 E-value: 1.80e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 313 PAESKTPEVEKVAGQPVTVTPETVSRSTKPTLASALDTAETALASSEepwVVPGAKTSEDSRVVQPRTATYDVVSSSATS 392
Cdd:PRK07003 368 PGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKA---AAAAAATRAEAPPAAPAPPATADRGDDAAD 444
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 393 DETEVEPHTATSDPILDSVPPKTSRTAEQPRATLAP-SEASFDPRTVEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTPKP 471
Cdd:PRK07003 445 GDAPVPAKANARASADSRCDERDAQPPADSGSASAPaSDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPAA 524
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 472 PRvkpAPEPETRPSAQSTKAPPHKT----------KKPGRR----RPKTTRSPEVPKSKPALEPATVPPEILVPTIVPKP 537
Cdd:PRK07003 525 AA---PPAPEARPPTPAAAAPAARAggaaaaldvlRNAGMRvssdRGARAAAAAKPAAAPAAAPKPAAPRVAVQVPTPRA 601
|
250
....*....|....*....
gi 1046853377 538 PQR-PKATRRPEAPQIQPA 555
Cdd:PRK07003 602 RAAtGDAPPNGAARAEQAA 620
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
413-550 |
2.19e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 48.94 E-value: 2.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 413 PKTSRTAEQPRATLAPSEASFdprtveifTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQSTKAP 492
Cdd:PRK14951 366 PAAAAEAAAPAEKKTPARPEA--------AAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAA 437
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 1046853377 493 PHKTKKPGRRRPKttrSPEVPKSKPALEPATVPPEILVPTIVPKPPQRPKATRRPEAP 550
Cdd:PRK14951 438 PAAAPAAVALAPA---PPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
389-701 |
3.67e-05 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 48.63 E-value: 3.67e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 389 SATSDETEVEPHT------ATSDPILDSVPPKTSRTAEQPR--ATLAPSEASFDPRTVEIFTSPEVRPTTAAPQQTTSIP 460
Cdd:PHA03307 25 PATPGDAADDLLSgsqgqlVSDSAELAAVTVVAGAAACDRFepPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREG 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 461 STPKRQSTPKPPRVKPAPEPETRPSAQSTKAPPHKTKKPGRRRPKtTRSPEVPKSKPALEPATVPP----------EILV 530
Cdd:PHA03307 105 SPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPA-ASPPAAGASPAAVASDAASSrqaalplsspEETA 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 531 PTIVPKPPQRPKATRRPEA-PQIQPAHEPVTFGSEAPALAIVTTTDIAPVISRTKASVTTLAPKSSRPRT---RQRPKYK 606
Cdd:PHA03307 184 RAPSSPPAEPPPSTPPAAAsPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENecpLPRPAPI 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 607 ATPSPkIPQTKPADLGPITAEPSLASTTKKVRRPRPKP-------KTTPHPEVPQTILVPATSLE-PVIRTETPGTTLVP 678
Cdd:PHA03307 264 TLPTR-IWEASGWNGPSSRPGPASSSSSPRERSPSPSPsspgsgpAPSSPRASSSSSSSRESSSSsTSSSSESSRGAAVS 342
|
330 340
....*....|....*....|...
gi 1046853377 679 klSQQPDFPHPKPKTTRSPAAPP 701
Cdd:PHA03307 343 --PGPSPSRSPSPSRPPPPADPS 363
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
955-1333 |
5.55e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 48.40 E-value: 5.55e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 955 SPQKTIAPRQTTSPPPklkPPHSRRPAKEQVPKGSlhttskPKMPPSPEVVDITSVPKDEQLSHKPDPEVSQSETVLPPV 1034
Cdd:PHA03247 2611 PAPPSPLPPDTHAPDP---PPPSPSPAANEPDPHP------PPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQ 2681
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 1035 TFRVEPPKTTIVPLETRDIPLIPVISPRP------SEEELQTTMEQTDQSTQELFTTKIPRTTELAKTTQAPHRLHTTPV 1108
Cdd:PHA03247 2682 RPRRRAARPTVGSLTSLADPPPPPPTPEPaphalvSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPP 2761
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 1109 RPRIPER---PHGRPALNKTTTRPDRTKSRGMSHKNGVGPGTKQTPKPSSTGRNTSVDSHATRKPGLIPGTRHRHTSPRP 1185
Cdd:PHA03247 2762 TTAGPPApapPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPP 2841
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 1186 VP-----------------PQRKPLPPNNVTGKPGSAGIISSSRATSPPLKATLK--------------PTGTATERPGA 1234
Cdd:PHA03247 2842 PPgppppslplggsvapggDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTEsfalppdqperppqPQAPPPPQPQP 2921
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 1235 EKKQPTAPASEEEFGNTTDFSSSPTKETDPLGKPRFIGPHvryiPKPDNKPCSITDSVRRFPTEEATEGNATSPPQNPPT 1314
Cdd:PHA03247 2922 QPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQ----PWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLT 2997
|
410
....*....|....*....
gi 1046853377 1315 NLTVVTVEGCPSFVILDWE 1333
Cdd:PHA03247 2998 GHSLSRVSSWASSLALHEE 3016
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
337-720 |
8.32e-05 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 47.45 E-value: 8.32e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 337 SRSTKPTLASALDTAETALASSEEPWVV--PGAKTSEDSRVVQPRTATydvvsSSATSDETEVEPHTATSDPilDSVPPK 414
Cdd:pfam03154 141 NRSTSPSIPSPQDNESDSDSSAQQQILQtqPPVLQAQSGAASPPSPPP-----PGTTQAATAGPTPSAPSVP--PQGSPA 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 415 TSRTAEQPRATLAP-----SEASFDPRTVEIFTSP-EVRPTTAAPQQTTSIPSTPKRQSTPKPPR--------------V 474
Cdd:pfam03154 214 TSQPPNQTQSTAAPhtliqQTPTLHPQRLPSPHPPlQPMTQPPPPSQVSPQPLPQPSLHGQMPPMphslqtgpshmqhpV 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 475 KPAPEPETRPSAQSTKAPPHKTKKPGRRRPKTTRSPEVPKSKPALEPATVPpeiLVPTIVPKPPQRPKATRR-PEAPQIQ 553
Cdd:pfam03154 294 PPQPFPLTPQSSQSQVPPGPSPAAPGQSQQRIHTPPSQSQLQSQQPPREQP---LPPAPLSMPHIKPPPTTPiPQLPNPQ 370
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 554 PAHEPVTFGSEAPALaiVTTTDIAPVISRTKASVTTLAPKSSRPrtrqrPKYKATPSPKIPQTKPADLGPITAEPSLAST 633
Cdd:pfam03154 371 SHKHPPHLSGPSPFQ--MNSNLPPPPALKPLSSLSTHHPPSAHP-----PPLQLMPQSQQLPPPPAQPPVLTQSQSLPPP 443
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 634 TKKVRRPRPKPKTTPHPEVPQTILVPATSlEPVIRTETPGTtlvpklSQQPDFPHPKPKTTRSPAAPPTELVSTTVFEPV 713
Cdd:pfam03154 444 AASHPPTSGLHQVPSQSPFPQHPFVPGGP-PPITPPSGPPT------STSSAMPGIQPPSSASVSSSGPVPAAVSCPLPP 516
|
....*..
gi 1046853377 714 IPLKEDP 720
Cdd:pfam03154 517 VQIKEEA 523
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
447-608 |
1.03e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 47.02 E-value: 1.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 447 RPTTAAPQQTTSIPSTPKRqstpkPPRVKPAPEPETRPSAQSTKAPPhktkkPGRRRPKTTRSPEVPKSKPALEPATVPP 526
Cdd:PRK14951 365 KPAAAAEAAAPAEKKTPAR-----PEAAAPAAAPVAQAAAAPAPAAA-----PAAAASAPAAPPAAAPPAPVAAPAAAAP 434
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 527 eilvptiVPKPPQRPKATRRPEAPQIQPAHEPVtfgseapalAIVTTTDIAPVISRTKASVTTLAPKSSRPRTRQRPKYK 606
Cdd:PRK14951 435 -------AAAPAAAPAAVALAPAPPAQAAPETV---------AIPVRVAPEPAVASAAPAPAAAPAAARLTPTEEGDVWH 498
|
..
gi 1046853377 607 AT 608
Cdd:PRK14951 499 AT 500
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
319-618 |
1.22e-04 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 46.98 E-value: 1.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 319 PEVEKVAGQPVTVTPETVSRS---TKPTLASALDTAETALASSEEPWVVPGAKTSEDSRVVQPRTATYDVVSSSATSDET 395
Cdd:PHA03378 576 PLTSPTTSQLASSAPSYAQTPwpvPHPSQTPEPPTTQSHIPETSAPRQWPMPLRPIPMRPLRMQPITFNVLVFPTPHQPP 655
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 396 EVEPHTATSDPILDSVPPKTSRTAeQPRATLAPSEASFDPRTveiftsPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVK 475
Cdd:PHA03378 656 QVEITPYKPTWTQIGHIPYQPSPT-GANTMLPIQWAPGTMQP------PPRAPTPMRPPAAPPGRAQRPAAATGRARPPA 728
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 476 PAPEPETRPSAQSTKAPPHKTKKPGRRRPKTTRSPEVPKSKPALEPATVPPeilvPTIVPKPPQRPKATRRPEaPQIQPA 555
Cdd:PHA03378 729 AAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGAPTPQPP----PQAPPAPQQRPRGAPTPQ-PPPQAG 803
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1046853377 556 HEPVTFGSEAPALAIVTTTDIApvisrtkASVTTLAPKSSRPRTRqRPKYKATPSPKIPQTKP 618
Cdd:PHA03378 804 PTSMQLMPRAAPGQQGPTKQIL-------RQLLTGGVKRGRPSLK-KPAALERQAAAGPTPSP 858
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
451-683 |
1.42e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 46.41 E-value: 1.42e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 451 AAPQQTTSIPSTPKRQSTPKPPRVKPAP--EPETRPSAQSTKAPPHKTKKPGRRRPKTTRSPEVPKSKPALEPATVPPEI 528
Cdd:PRK12323 372 AGPATAAAAPVAQPAPAAAAPAAAAPAPaaPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPA 451
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 529 LVPTIVPKPPQRPKATrrpeAPQIQPAHEPVTFGSEAPALAIVTTTDIAPVISRTKASVTTLAPKSSRPRTRQRPKYkAT 608
Cdd:PRK12323 452 PAPAAAPAAAARPAAA----GPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAE-SI 526
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1046853377 609 PSPKIPQtKPADLGPITAEPSLASTTKKVRRPRPKPKTTPhPEVPQTILVPATSLE-PVIRTETPGTTLVPKLSQQ 683
Cdd:PRK12323 527 PDPATAD-PDDAFETLAPAPAAAPAPRAAAATEPVVAPRP-PRASASGLPDMFDGDwPALAARLPVRGLAQQLARQ 600
|
|
| fn3 |
pfam00041 |
Fibronectin type III domain; |
116-195 |
1.50e-04 |
|
Fibronectin type III domain;
Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 42.02 E-value: 1.50e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 116 KPLQLVVGTLTPSSVFLSWgflinphhdwTLPSHCSSD-RFYTIRYREKDKEKKWIFQLCPATET--IVENLKPNTVYEF 192
Cdd:pfam00041 2 APSNLTVTDVTSTSLTVSW----------TPPPDGNGPiTGYEVEYRPKNSGEPWNEITVPGTTTsvTLTGLKPGTEYEV 71
|
...
gi 1046853377 193 GVK 195
Cdd:pfam00041 72 RVQ 74
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
447-702 |
1.87e-04 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 46.30 E-value: 1.87e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 447 RPTTAAPQQTTSIPSTPKRQSTPKPPRVKP--APEPET----RPSAQSTKAPPHKTKKPGRRRPKTTRSPevpkskPALE 520
Cdd:pfam03154 324 RIHTPPSQSQLQSQQPPREQPLPPAPLSMPhiKPPPTTpipqLPNPQSHKHPPHLSGPSPFQMNSNLPPP------PALK 397
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 521 PATVPPEILVPTIVPKPPQRPKATRRPEAPQIQPahepvtfgseapalAIVTTTDIAPVISRTKASVTTLAPKSSRPrtr 600
Cdd:pfam03154 398 PLSSLSTHHPPSAHPPPLQLMPQSQQLPPPPAQP--------------PVLTQSQSLPPPAASHPPTSGLHQVPSQS--- 460
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 601 qrpkyKATPSPKIPQTKPADLGPITAEPSLASTTKKVRRPRPKPKTTPHPeVPQTilvPATSLEPVIRTETPgttlvPKL 680
Cdd:pfam03154 461 -----PFPQHPFVPGGPPPITPPSGPPTSTSSAMPGIQPPSSASVSSSGP-VPAA---VSCPLPPVQIKEEA-----LDE 526
|
250 260
....*....|....*....|..
gi 1046853377 681 SQQPDFPHPKPkttRSPAAPPT 702
Cdd:pfam03154 527 AEEPESPPPPP---RSPSPEPT 545
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
444-654 |
2.11e-04 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 45.92 E-value: 2.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 444 PEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQSTKAPPHKTKKPGRRRPKTTRSPEVPKSKPALEPAT 523
Cdd:NF033839 292 PSAPKPGMQPSPQPEKKEVKPEPETPKPEVKPQLEKPKPEVKPQPEKPKPEVKPQLETPKPEVKPQPEKPKPEVKPQPEK 371
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 524 VPPEILVPTIVPKPPQRPKatrrPEAPQIQPAHEPVTFGSEapalaivtttdIAPVISRTKASVTTLAPKSSRPRTRQRP 603
Cdd:NF033839 372 PKPEVKPQPETPKPEVKPQ----PEKPKPEVKPQPEKPKPE-----------VKPQPEKPKPEVKPQPEKPKPEVKPQPE 436
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 1046853377 604 KYKATPSPKIPQTKPAdlgpITAEPSLASTTKKVRRPRPKPKTTPHPEVPQ 654
Cdd:NF033839 437 KPKPEVKPQPEKPKPE----VKPQPETPKPEVKPQPEKPKPEVKPQPEKPK 483
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
429-804 |
2.36e-04 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 45.53 E-value: 2.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 429 SEASFDPRTVEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTP--KPPRVKPAPEPETRPSAQSTKAPPHKTKKPGRRRP-- 504
Cdd:NF033839 153 SGSSTKPETPQPENPEHQKPTTPAPDTKPSPQPEGKKPSVPdiNQEKEKAKLAVATYMSKILDDIQKHHLQKEKHRQIva 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 505 --------KTTRSPEVPKSKPALEPATVPPEILVPTI-------------VPKPPQRPKatrrPEAPQIQPAHEPVTFGS 563
Cdd:NF033839 233 likeldelKKQALSEIDNVNTKVEIENTVHKIFADMDavvtkfkkgltqdTPKEPGNKK----PSAPKPGMQPSPQPEKK 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 564 EAPALAIVTTTDIAPVISRTKASVTTL--APKSSRPRTRQRPKYKATPSPKI--PQTKPADLGP---ITAEPSLASTTKK 636
Cdd:NF033839 309 EVKPEPETPKPEVKPQLEKPKPEVKPQpeKPKPEVKPQLETPKPEVKPQPEKpkPEVKPQPEKPkpeVKPQPETPKPEVK 388
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 637 VRRPRPKPKTTPHPEVPQTILVPATSLEpviRTETPGTTLVPKLSQQPDFPHPKPKTTRSPAAPPTELVSttvfEPVIPL 716
Cdd:NF033839 389 PQPEKPKPEVKPQPEKPKPEVKPQPEKP---KPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKP----QPETPK 461
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 717 KEDPVTTIVPFTDLEPATDLETPVAFRTEA----PRTTLASKKSQRTRRPRPRPPKATLSPQA--PKTKTVPAVVLEPVT 790
Cdd:NF033839 462 PEVKPQPEKPKPEVKPQPEKPKPDNSKPQAddkkPSTPNNLSKDKQPSNQASTNEKATNKPKKslPSTGSISNLALEIAG 541
|
410
....*....|....
gi 1046853377 791 LRPEVQVTTLAPKK 804
Cdd:NF033839 542 LLTLAGATILAKKR 555
|
|
| FN3 |
COG3401 |
Fibronectin type 3 domain [General function prediction only]; |
1153-1407 |
2.73e-04 |
|
Fibronectin type 3 domain [General function prediction only];
Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 45.38 E-value: 2.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 1153 PSSTGRNTSVDSHATRKPGLIPGTRHRHTSPRPVPPQRKPLPPNNVTGKPGSAGIISSSRATSPPLKATLKPTGTATERP 1232
Cdd:COG3401 73 AGTTSGVAAVAVAAAPPTATGLTTLTGSGSVGGATNTGLTSSDEVPSPAVGTATTATAVAGGAATAGTYALGAGLYGVDG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 1233 GAEKKQPTAPASEEEFGNTTDFSSSPTKETDPLGKPRFIGPHVRYIPKPDN----KPCSITDSVRRFPTEEATEGNATSP 1308
Cdd:COG3401 153 ANASGTTASSVAGAGVVVSPDTSATAAVATTSLTVTSTTLVDGGGDIEPGTtyyyRVAATDTGGESAPSNEVSVTTPTTP 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 1309 PqNPPTNLTVVTVEgcPSFVILDWEKPLNDTVTEYEvISRENGSfSGKNKSIQITNQTFSTVENLKPDTSYEFQVKPKNP 1388
Cdd:COG3401 233 P-SAPTGLTATADT--PGSVTLSWDPVTESDATGYR-VYRSNSG-DGPFTKVATVTTTSYTDTGLTNGTTYYYRVTAVDA 307
|
250 260
....*....|....*....|
gi 1046853377 1389 LG-EGPASNTVAFSTESADP 1407
Cdd:COG3401 308 AGnESAPSNVVSVTTDLTPP 327
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
424-701 |
4.55e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 44.84 E-value: 4.55e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 424 ATLAPSEASFDPRTVEIFTSPEVRPTTAAPQQTTSipSTPKRQSTPKPPRVKPAPEPETRPSAQSTKAPPHK-----TKK 498
Cdd:PRK07003 331 ATVGRGELGLAPDEYAGFTMTLLRMLAFEPAVTGG--GAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTavtgaAGA 408
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 499 PGRRRPKTTRSPEVPKSKPA-LEPATVPPEILVPTIVPKPPQRPKATR-RPEAPQIQPAHEPVTfgseAPALAIVTTTDI 576
Cdd:PRK07003 409 ALAPKAAAAAAATRAEAPPAaPAPPATADRGDDAADGDAPVPAKANARaSADSRCDERDAQPPA----DSGSASAPASDA 484
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 577 APVISRTKASVTTLAPKSSRPRTRQRPKYKATPSPKIPQtKPADLGPITAEPSLASTTKKVR------------------ 638
Cdd:PRK07003 485 PPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPA-AAAPPAPEARPPTPAAAAPAARaggaaaaldvlrnagmrv 563
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1046853377 639 ---RPRpKPKTTPHPEVPQTILVPATSLEPVIRTETPGTTLVPKlSQQPDFPHPKPKTTRSPAAPP 701
Cdd:PRK07003 564 ssdRGA-RAAAAAKPAAAPAAAPKPAAPRVAVQVPTPRARAATG-DAPPNGAARAEQAAESRGAPP 627
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
378-569 |
5.04e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 44.87 E-value: 5.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 378 PRTATYDVVSSSATSDETEVEPHTATSDPILDSVPPKTSRTAEQPRAtlAPSEASFDPRTVEIFTSPEVRPTTAAPQQTT 457
Cdd:PRK12323 375 ATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAA--APARRSPAPEALAAARQASARGPGGAPAPAP 452
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 458 SIPSTPKRQSTP--KPPRVKP--APEPETRPSAQSTKAPPHKTKKPGRRRPKTTRSPEVPKSKPAL---------EPATV 524
Cdd:PRK12323 453 APAAAPAAAARPaaAGPRPVAaaAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPagwvaesipDPATA 532
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 1046853377 525 PPEILVPTIVPKPPQ----RPKATRRPEAPQIQPAHE----PVTFGSEAPALA 569
Cdd:PRK12323 533 DPDDAFETLAPAPAAapapRAAAATEPVVAPRPPRASasglPDMFDGDWPALA 585
|
|
| FN3 |
COG3401 |
Fibronectin type 3 domain [General function prediction only]; |
1296-1450 |
5.35e-04 |
|
Fibronectin type 3 domain [General function prediction only];
Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 44.61 E-value: 5.35e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 1296 PTEEATEGNATSPPQnPPTNLTVVTVEgcPSFVILDWEKPLNDTVTEYEV--ISRENGSFSGKNKSIqitNQTFSTVENL 1373
Cdd:COG3401 314 PSNVVSVTTDLTPPA-APSGLTATAVG--SSSITLSWTASSDADVTGYNVyrSTSGGGTYTKIAETV---TTTSYTDTGL 387
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1046853377 1374 KPDTSYEFQVKPKNPLG-EGPASNTVAFSTESADPRVSEPISAGRDAIWTERPFNSDSYSECKGKQYVKRTWYKKFVG 1450
Cdd:COG3401 388 TPGTTYYYKVTAVDAAGnESAPSEEVSATTASAASGESLTASVDAVPLTDVAGATAAASAASNPGVSAAVLADGGDTG 465
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
413-587 |
7.04e-04 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 43.99 E-value: 7.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 413 PKTSRTAEQPRATLAPSEASFDPrtvEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPpRVKPAPE-PETRPSAQSTKA 491
Cdd:NF033839 308 KEVKPEPETPKPEVKPQLEKPKP---EVKPQPEKPKPEVKPQLETPKPEVKPQPEKPKP-EVKPQPEkPKPEVKPQPETP 383
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 492 PPHKTKKPGRRRPKTTRSPEVPKSKPALEPATVPPEILVPTIVPKPPQRPKatrrPEAPQIQPAHEPVTFGSEAPALAIV 571
Cdd:NF033839 384 KPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQ----PEKPKPEVKPQPEKPKPEVKPQPET 459
|
170
....*....|....*.
gi 1046853377 572 TTTDIAPVISRTKASV 587
Cdd:NF033839 460 PKPEVKPQPEKPKPEV 475
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
395-626 |
7.05e-04 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 44.15 E-value: 7.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 395 TEVEPHTATSDPIlDSVPPKTSRTAEQPratLAPSEASFD--PRTVEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTPKP- 471
Cdd:PLN03209 344 TKPVTPEAPSPPI-EEEPPQPKAVVPRP---LSPYTAYEDlkPPTSPIPTPPSSSPASSKSVDAVAKPAEPDVVPSPGSa 419
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 472 ---PRVKPAPEPETRPSAQSTKAPPHKTKKPGRRRPkttrSPEVPKSKPALEPATVP--PEILVPTIVPKPPQRPKATRR 546
Cdd:PLN03209 420 snvPEVEPAQVEAKKTRPLSPYARYEDLKPPTSPSP----TAPTGVSPSVSSTSSVPavPDTAPATAATDAAAPPPANMR 495
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 547 PEAPQIQPAHEPVTFGSEAPALAIVTTTDIAPVISRTKASVTTLAPKSSRPRTRQRPKykatpsPKIPQTKPADLGPITA 626
Cdd:PLN03209 496 PLSPYAVYDDLKPPTSPSPAAPVGKVAPSSTNEVVKVGNSAPPTALADEQHHAQPKPR------PLSPYTMYEDLKPPTS 569
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
316-492 |
8.20e-04 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 44.26 E-value: 8.20e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 316 SKTPEVEKVAGQPVTVTPETVsrstkptlasALDTAETALASSEEPWVVPGAKTSEDSRVVQPRTATyDVVSSSATSDET 395
Cdd:PRK10811 851 QDVQVEEQREAEEVQVQPVVA----------EVPVAAAVEPVVSAPVVEAVAEVVEEPVVVAEPQPE-EVVVVETTHPEV 919
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 396 EVEPHTATSDPILDSVPPKTSRTAEQPrATLAPSEASFDPRTVEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVK 475
Cdd:PRK10811 920 IAAPVTEQPQVITESDVAVAQEVAEHA-EPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVE 998
|
170 180
....*....|....*....|....*.
gi 1046853377 476 PAPEPETRP---------SAQSTKAP 492
Cdd:PRK10811 999 PEVAPAQVPeatvehnhaTAPMTRAP 1024
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
300-618 |
8.30e-04 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 44.29 E-value: 8.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 300 LKAQLAKNETLALPAESKTPEVEKVAGQPVTVTPETVSRSTKPTLASALDTAETALASSEEPWVVPGAKTSEDS---RVV 376
Cdd:PHA03378 636 LRMQPITFNVLVFPTPHQPPQVEITPYKPTWTQIGHIPYQPSPTGANTMLPIQWAPGTMQPPPRAPTPMRPPAAppgRAQ 715
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 377 QPRTATYDVVSSSATSDETEVEPHTATSDPildsvPPKTSRTAEQPRATlAPSEASfdprtveiftSPEVRPTTAAPQQT 456
Cdd:PHA03378 716 RPAAATGRARPPAAAPGRARPPAAAPGRAR-----PPAAAPGRARPPAA-APGRAR----------PPAAAPGAPTPQPP 779
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 457 TSIPSTPKRQSTPKPprvKPAPEPETRPSAQSTKAP-PHKTKKPGRRRPKTTRSPEVPKSKPAL--EPATVPPEILVPTI 533
Cdd:PHA03378 780 PQAPPAPQQRPRGAP---TPQPPPQAGPTSMQLMPRaAPGQQGPTKQILRQLLTGGVKRGRPSLkkPAALERQAAAGPTP 856
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 534 VPKPPQRPKATRRP--EAPQIQPAHEPVTFGSEAPALAiVTTTDIAPVISRTKASVTTLAPKSSRPrtRQRPKYKATPSP 611
Cdd:PHA03378 857 SPGSGTSDKIVQAPvfYPPVLQPIQVMRQLGSVRAAAA-STVTQAPTEYTGERRGVGPMHPTDIPP--SKRAKTDAYVES 933
|
....*..
gi 1046853377 612 KIPQTKP 618
Cdd:PHA03378 934 QPPHGGQ 940
|
|
| PRK13914 |
PRK13914 |
invasion associated endopeptidase; |
322-489 |
8.89e-04 |
|
invasion associated endopeptidase;
Pssm-ID: 237555 [Multi-domain] Cd Length: 481 Bit Score: 43.64 E-value: 8.89e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 322 EKVAGQPVTVTPETVSRSTKPTLASALDTAETALASSEEPWVVPGAKTSEDSRVVQpRTATYDVVSSSATSDETEVEPHT 401
Cdd:PRK13914 141 DKVTSTPVAPTQEVKKETTTQQAAPAAETKTEVKQTTQATTPAPKVAETKETPVVD-QNATTHAVKSGDTIWALSVKYGV 219
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 402 ATSDPI------LDSVPPKTSRTAEQPRATLAP-SEASFDPRTVEIFTSPEVRPTTAAPQQTT-SIPSTPKRQSTPKPPR 473
Cdd:PRK13914 220 SVQDIMswnnlsSSSIYVGQKLAIKQTANTATPkAEVKTEAPAAEKQAAPVVKENTNTNTATTeKKETTTQQQTAPKAPT 299
|
170
....*....|....*...
gi 1046853377 474 --VKPAPEPETRPSAQST 489
Cdd:PRK13914 300 eaAKPAPAPSTNTNANKT 317
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
483-678 |
1.04e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 43.71 E-value: 1.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 483 RPSAQSTKA-PPHKTKKPGRRRPKTTRSPEVPKSKPALEPATVPPEILVPTivPKPPQRPKATRRPEAPQIQPAHEPVTF 561
Cdd:PRK12323 364 RPGQSGGGAgPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAA--AARAVAAAPARRSPAPEALAAARQASA 441
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 562 GSEAPALAIVTTTDIAPV--ISRTKASVTTLAPKSSRPRTRQRPKYKATPSPKIP---QTKPADLGPITAEPSLASTTKK 636
Cdd:PRK12323 442 RGPGGAPAPAPAPAAAPAaaARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPppwEELPPEFASPAPAQPDAAPAGW 521
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 1046853377 637 VRRPRPKPKTTPhPEVPQTILVPATSLEPVIRTETPGTTLVP 678
Cdd:PRK12323 522 VAESIPDPATAD-PDDAFETLAPAPAAAPAPRAAAATEPVVA 562
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
422-558 |
1.10e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 43.82 E-value: 1.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 422 PRATLAPSEAsfdprtVEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQSTKAPPHKTKKPGR 501
Cdd:PRK07764 371 ERGLLARLER------LERRLGVAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSP 444
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 1046853377 502 RRPKTTRSPEVPKSKPALEPATVPPEILVPTIVPKPPQRPKATRRPEAPQIQPAHEP 558
Cdd:PRK07764 445 AGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPA 501
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
432-527 |
1.22e-03 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 43.73 E-value: 1.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 432 SFDPRTVEIFTSPEVRPTTAAPQQTTsIPSTPKRQSTPKPPRVKPAPEPETRPSAQSTKAPPhktkKPGRRRPKTTRSPE 511
Cdd:PRK12270 24 SVDPSWREFFADYGPGSTAAPTAAAA-AAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPP----KPAAAAAAAAAPAA 98
|
90
....*....|....*.
gi 1046853377 512 VPKSKPALEPATVPPE 527
Cdd:PRK12270 99 PPAAAAAAAPAAAAVE 114
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
433-585 |
1.32e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 43.32 E-value: 1.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 433 FDPRTVEifTSPEVRPTTAAPQQTTSIPSTPkRQSTPKPPRVKPAPEPETRPSAQSTKAPPHKTKKPGRRRPKTTRSPEV 512
Cdd:PRK07994 359 FHPAAPL--PEPEVPPQSAAPAASAQATAAP-TAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGA 435
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1046853377 513 PKSKPALEPATVPPEILVPTIVPKPPQRPKATRRPEAPQIQPAHEPV-TFGSEAPALAIVTTTDIAPVISRTKA 585
Cdd:PRK07994 436 TKAKKSEPAAASRARPVNSALERLASVRPAPSALEKAPAKKEAYRWKaTNPVEVKKEPVATPKALKKALEHEKT 509
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
116-195 |
1.54e-03 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 39.40 E-value: 1.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 116 KPLQLVVGTLTPSSVFLSWgfliNPHHDWTLPSHcssdrFYTIRYREKDKE--KKWIFQLCPATETIVENLKPNTVYEFG 193
Cdd:cd00063 3 PPTNLRVTDVTSTSVTLSW----TPPEDDGGPIT-----GYVVEYREKGSGdwKEVEVTPGSETSYTLTGLKPGTEYEFR 73
|
..
gi 1046853377 194 VK 195
Cdd:cd00063 74 VR 75
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
365-666 |
1.65e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 43.30 E-value: 1.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 365 PGAKTSEDSRVVQPRTATYDVVSSSATSDETEVEPHTATSDPILDSVPPKTSRTAEQPRATLAPSEASFDPRTVEIFTSP 444
Cdd:PRK07003 385 ARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARASADSRCD 464
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 445 EVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQSTKAPPHKTKKPGRRRPKTTRSPEVPKSKPAlepATV 524
Cdd:PRK07003 465 ERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPAAAAPPAPEARPPTPA---AAA 541
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 525 PP----------EILVPTIVPKPPQRpkaTRRPEAPQIQPAHEPVTFGSEAPALAIVTTTDIAPViSRTKASVTTLAPKS 594
Cdd:PRK07003 542 PAaraggaaaalDVLRNAGMRVSSDR---GARAAAAAKPAAAPAAAPKPAAPRVAVQVPTPRARA-ATGDAPPNGAARAE 617
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 595 SRPRTRQRPKykatPSPKIPqtkPADLGPITAE-----------PSLASTTKKVRRPrPKPKTTPHPEVPQTILVPATSL 663
Cdd:PRK07003 618 QAAESRGAPP----PWEDIP---PDDYVPLSADegfggpddgfvPVFDSGPDDVRVA-PKPADAPAPPVDTRPLPPAIPL 689
|
...
gi 1046853377 664 EPV 666
Cdd:PRK07003 690 DAI 692
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
399-550 |
1.75e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 42.93 E-value: 1.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 399 PHTATSDPildSVPPKTSRTAEQPRATLAPSEASFDPRTVEIFTSPEVRPTTAAPQQTTSIPST--------PKRQSTPK 470
Cdd:PRK07994 361 PAAPLPEP---EVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQllaarqqlQRAQGATK 437
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 471 PPRVKPAPEPETRPSAQSTKAPPHKtkkpgrrRPKTTRSPEVPKSKPALEPATVPPEILVPTIVPKPPQRPKATRRPEAP 550
Cdd:PRK07994 438 AKKSEPAAASRARPVNSALERLASV-------RPAPSALEKAPAKKEAYRWKATNPVEVKKEPVATPKALKKALEHEKTP 510
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
409-748 |
1.86e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 43.05 E-value: 1.86e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 409 DSVPPKTSRTAEQPRATLAPSEASFDPRTVEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQS 488
Cdd:PRK07764 391 AGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAP 470
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 489 TkAPPHKTKKPGrRRPKTTRSPEVPKSKPALEPATVPPEILV------PTIVPKPPQRPKATRRPEAPQIQPA------- 555
Cdd:PRK07764 471 A-AAPEPTAAPA-PAPPAAPAPAAAPAAPAAPAAPAGADDAAtlrerwPEILAAVPKRSRKTWAILLPEATVLgvrgdtl 548
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 556 -----------------HEPV-------TFGSEAPALAIVTTTDIAPVISRTKASVTTL-APKSSRPRTRQRPKYKATPS 610
Cdd:PRK07764 549 vlgfstgglarrfaspgNAEVlvtalaeELGGDWQVEAVVGPAPGAAGGEGPPAPASSGpPEEAARPAAPAAPAAPAAPA 628
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 611 PKIPQTKPADLGPITAEPSLASTTKKVRRPRPKPKTTPHP-------EVPQTILVPATSLEPVIRTETPGTTLVPKLSQQ 683
Cdd:PRK07764 629 PAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGwpakaggAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAAT 708
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1046853377 684 PDFPHPKPKTTRSPAAPPTELVSTTVFEPVIPLKEDPVTTIVPFTDLEPATDLETPVAFRTEAPR 748
Cdd:PRK07764 709 PPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAA 773
|
|
| PHA03379 |
PHA03379 |
EBNA-3A; Provisional |
447-700 |
2.30e-03 |
|
EBNA-3A; Provisional
Pssm-ID: 223066 [Multi-domain] Cd Length: 935 Bit Score: 42.74 E-value: 2.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 447 RPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQSTKAPPHKTKK----PGRRRPKT--------TRSPEVPK 514
Cdd:PHA03379 410 EPTYGTPRPPVEKPRPEVPQSLETATSHGSAQVPEPPPVHDLEPGPLHDQHSmapcPVAQLPPGplqdlepgDQLPGVVQ 489
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 515 S-KPALEPATVPPEILVPTIVPKPPQRPKATRRPEAPQIQPAhEPVTfgseAPALAIVTTTDIAPvisrTKASVTTLAPK 593
Cdd:PHA03379 490 DgRPACAPVPAPAGPIVRPWEASLSQVPGVAFAPVMPQPMPV-EPVP----VPTVALERPVCPAP----PLIAMQGPGET 560
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 594 SSRPRTRQR---PKYKATPsPKIPQTKPADLGPITAEPSLASTTKKVR-RPRPKPKTTP-----HPEVPQTILVPATSLE 664
Cdd:PHA03379 561 SGIVRVRERwrpAPWTPNP-PRSPSQMSVRDRLARLRAEAQPYQASVEvQPPQLTQVSPqqpmeYPLEPEQQMFPGSPFS 639
|
250 260 270
....*....|....*....|....*....|....*..
gi 1046853377 665 PVIRTETPGTtlVPKLSQQP-DFPHPKPKTTRSPAAP 700
Cdd:PHA03379 640 QVADVMRAGG--VPAMQPQYfDLPLQQPISQGAPLAP 674
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
313-653 |
2.61e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 42.28 E-value: 2.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 313 PAESKTPEVEKVAGQPVTVTPETVSRSTKPTLASALDTAETALASSEEPWVVPGAKTSEDSRVVQPrtatydvvSSSATS 392
Cdd:PRK07764 420 AAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPAPP--------AAPAPA 491
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 393 DETEVEPHTATS-------------DPILDSVPPKTSRTAE--QPRATLApseaSFDPRTVEI-FTSPEVRPTTAAPQQT 456
Cdd:PRK07764 492 AAPAAPAAPAAPagaddaatlrerwPEILAAVPKRSRKTWAilLPEATVL----GVRGDTLVLgFSTGGLARRFASPGNA 567
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 457 TSI--------------------PSTPKRQSTPKPPRVKPAPEPETRPSAQSTKAPPHKTKKPGRRRPKTTRSPEVPKSK 516
Cdd:PRK07764 568 EVLvtalaeelggdwqveavvgpAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGV 647
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 517 PALEPATVPPEILVPTIVPKPPQRPKATRRPEAPQIQPAHEPVTFGSEAPALAIVTTTDIAPVISRTKASVTTLAPKSSR 596
Cdd:PRK07764 648 AAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQG 727
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 1046853377 597 PRTRQRPKYKATPSPKIPQTKPADLGPITAEPSLASTTKKVRRPRPKPKTTPHPEVP 653
Cdd:PRK07764 728 ASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEE 784
|
|
| NESP55 |
pfam06390 |
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian ... |
387-519 |
2.67e-03 |
|
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian neuroendocrine-specific golgi protein P55 (NESP55) sequences. NESP55 is a novel member of the chromogranin family and is a soluble, acidic, heat-stable secretory protein that is expressed exclusively in endocrine and nervous tissues, although less widely than chromogranins.
Pssm-ID: 115071 [Multi-domain] Cd Length: 261 Bit Score: 41.39 E-value: 2.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 387 SSSATSDETEVEPHTATSDPILDSVPPKTSrtAEQPRATLAPSEASFDPRTVEIFTSPEVRPTTAAP---QQTTSIPSTP 463
Cdd:pfam06390 122 PESDIESETEFETEPETEPDTAPTTEPETE--PEDEPGPVVPKGATFHQSLTERLHALKLQSADASPrraPPSTQEPESA 199
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 464 KRQSTPKPPRVKPAP-EPETRPSA-QSTKAPPH--KTKKPGRRRPKttrSPEVPKSKPAL 519
Cdd:pfam06390 200 REGEEPERGPLDKDPrDPEEEEEEkEEEKQQPHrcKPKKPARRRDP---SPESPPKKGAI 256
|
|
| FN3 |
smart00060 |
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
117-195 |
2.80e-03 |
|
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 38.36 E-value: 2.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 117 PLQLVVGTLTPSSVFLSWgflinphhdwtLPSHCSSDRFYTIRYREKDKEKKWIFQLCPA----TETIVENLKPNTVYEF 192
Cdd:smart00060 4 PSNLRVTDVTSTSVTLSW-----------EPPPDDGITGYIVGYRVEYREEGSEWKEVNVtpssTSYTLTGLKPGTEYEF 72
|
...
gi 1046853377 193 GVK 195
Cdd:smart00060 73 RVR 75
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
443-555 |
3.22e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 42.23 E-value: 3.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 443 SPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQSTKAPPHKTKKPGRRRPKTTRSPEVPKSKPALEPA 522
Cdd:PHA03247 379 SLPTRKRRSARHAATPFARGPGGDDQTRPAAPVPASVPTPAPTPVPASAPPPPATPLPSAEPGSDDGPAPPPERQPPAPA 458
|
90 100 110
....*....|....*....|....*....|...
gi 1046853377 523 TVPPEILVPTIVPKPPQRPKATRRPEAPQIQPA 555
Cdd:PHA03247 459 TEPAPDDPDDATRKALDALRERRPPEPPGADLA 491
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
975-1314 |
3.59e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 42.23 E-value: 3.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 975 PHSRRPAKEQVPkgslhttSKPKMPPSPEVvditsvpkdeqlSHKPDPEVSQSETVLPPVTFRVEPPKTTIVP------- 1047
Cdd:PHA03247 2478 PVYRRPAEARFP-------FAAGAAPDPGG------------GGPPDPDAPPAPSRLAPAILPDEPVGEPVHPrmltwir 2538
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 1048 ----LETRDI----PLIPVISPRPSeeelqttmeqTDQSTQElfTTKIPRTTELAKTTQAphrlhttpVRPRIPERPhGR 1119
Cdd:PHA03247 2539 gleeLASDDAgdppPPLPPAAPPAA----------PDRSVPP--PRPAPRPSEPAVTSRA--------RRPDAPPQS-AR 2597
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 1120 PalnkTTTRPDRTKSRGMSHKNGVGPGTKQTPKPSSTGRntsvdSHATRKPGlipgtrhRHTSPRPVPPQRKPLPPNNVT 1199
Cdd:PHA03247 2598 P----RAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPS-----PAANEPDP-------HPPPTVPPPERPRDDPAPGRV 2661
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 1200 GKPGSAGIISSSRATSPPLKATLKPTGTATERPGAEKKQPTAPASEEEFGNTTDFSSSPTKETDPLGKPRFIGPHVRYIP 1279
Cdd:PHA03247 2662 SRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAP 2741
|
330 340 350
....*....|....*....|....*....|....*.
gi 1046853377 1280 KPDNKPCSITDSVRRFPTEEATEG-NATSPPQNPPT 1314
Cdd:PHA03247 2742 PAVPAGPATPGGPARPARPPTTAGpPAPAPPAAPAA 2777
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
413-569 |
3.82e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 41.77 E-value: 3.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 413 PKTSRTA-EQPRATLAPSEASfdPRTVEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQSTKA 491
Cdd:PRK07994 361 PAAPLPEpEVPPQSAAPAASA--QATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKA 438
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 492 PPHKTKKPGRRRPKTT---RSPEVPKSKPALEPATVPPEILVPTIVPKPPQRPKATRRPEAPQIQPAHEPvtfgseAPAL 568
Cdd:PRK07994 439 KKSEPAAASRARPVNSaleRLASVRPAPSALEKAPAKKEAYRWKATNPVEVKKEPVATPKALKKALEHEK------TPEL 512
|
.
gi 1046853377 569 A 569
Cdd:PRK07994 513 A 513
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
849-1063 |
4.28e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 41.79 E-value: 4.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 849 APKTPKRTHRVRPKPKTTTPEAPLTKPVAAtdlesSALSTEVPTTVVLTTALVPATLRTKSPKTTLAPSVQRTRRPRPRP 928
Cdd:PRK12323 373 GPATAAAAPVAQPAPAAAAPAAAAPAPAAP-----PAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGA 447
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 929 KTTARTDVSESKSvsddlelvAFSTESPQKTIAPRQTTSPPPKLKPPHSRRPAKEQVPKGSlhttSKPKMPPSPEVVDIT 1008
Cdd:PRK12323 448 PAPAPAPAAAPAA--------AARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWE----ELPPEFASPAPAQPD 515
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 1046853377 1009 SVPKDEQLSHKPDPEVSQsetvlPPVTFRVEPPKTTIVPLETRDIPLIPVISPRP 1063
Cdd:PRK12323 516 AAPAGWVAESIPDPATAD-----PDDAFETLAPAPAAAPAPRAAAATEPVVAPRP 565
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
491-719 |
4.39e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 41.85 E-value: 4.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 491 APPHKTKKPGRRRPKTTRS----PEVPKSKPALEPATVPPEILVPTIVPKPPQRPKATRRPEAPqiqPAHEPVTFGSEAP 566
Cdd:PHA03247 256 APPPVVGEGADRAPETARGatgpPPPPEAAAPNGAAAPPDGVWGAALAGAPLALPAPPDPPPPA---PAGDAEEEDDEDG 332
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 567 ALAIVTTtdiapvISRTKASVTTLAPKssrprtRQRPKYKatpspkiPQTKPADLGPITAEPSLASTTKKVRRPRPKPKT 646
Cdd:PHA03247 333 AMEVVSP------LPRPRQHYPLGFPK------RRRPTWT-------PPSSLEDLSAGRHHPKRASLPTRKRRSARHAAT 393
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 647 ------------TPHPEVPQTILVPATSLEPVIRTETPGTTLvpklsqqpdfPHPKPKTTRSPAAPPTELVSTTVFEPVI 714
Cdd:PHA03247 394 pfargpggddqtRPAAPVPASVPTPAPTPVPASAPPPPATPL----------PSAEPGSDDGPAPPPERQPPAPATEPAP 463
|
....*
gi 1046853377 715 PLKED 719
Cdd:PHA03247 464 DDPDD 468
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
554-799 |
4.41e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 41.76 E-value: 4.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 554 PAHEPVTFGSEAPALAIVTTTDIAPVISRTKASVTTLAPKSSRPRTrqrpkykATPSPKIPQTKPAdlgpitAEPSLAST 633
Cdd:PRK07003 369 GGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKA-------AAAAAATRAEAPP------AAPAPPAT 435
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 634 TKKVRRPRPKPKTTPHPEVPQTilvpATSLEPVIRTETPGTTLVPKLSQQPDFPHPKPKTTRSPAAPPTELVSTTVFEPV 713
Cdd:PRK07003 436 ADRGDDAADGDAPVPAKANARA----SADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDAR 511
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 714 IPLKEDPVTTIVPFTDLEPATDLETPVAfRTEAPRTTLASKKSQ--RTRRPRPRPPKATLSPQAPKTKTVPAVVLEPVTL 791
Cdd:PRK07003 512 APAAASREDAPAAAAPPAPEARPPTPAA-AAPAARAGGAAAALDvlRNAGMRVSSDRGARAAAAAKPAAAPAAAPKPAAP 590
|
....*...
gi 1046853377 792 RPEVQVTT 799
Cdd:PRK07003 591 RVAVQVPT 598
|
|
| PHA03377 |
PHA03377 |
EBNA-3C; Provisional |
367-598 |
4.96e-03 |
|
EBNA-3C; Provisional
Pssm-ID: 177614 [Multi-domain] Cd Length: 1000 Bit Score: 41.58 E-value: 4.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 367 AKTSEDSRVvQPRTATYDVVSSSATSDETEVEPHTATSDPILDSVPPKTS--RTAEQPRATLAPSEASFDPRTVEI---- 440
Cdd:PHA03377 698 AQPSEESHL-SSMSPTQPISHEEQPRYEDPDDPLDLSLHPDQAPPPSHQApySGHEEPQAQQAPYPGYWEPRPPQApylg 776
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 441 FTSPEVRPTTAAPQQTTSIPSTPKRQS-----------------------TPKPPRVKPAPEPETRPSAQSTKAPPHKTK 497
Cdd:PHA03377 777 YQEPQAQGVQVSSYPGYAGPWGLRAQHpryrhswaywsqypghghpqgpwAPRPPHLPPQWDGSAGHGQDQVSQFPHLQS 856
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 498 KPGRRRPKTTRSPEVPKSKPaLEPATVPPEILVPtivPKPPQRPKATRRPEAPqiQPAHEPVTFGSEAPALAIVTTTDIA 577
Cdd:PHA03377 857 ETGPPRLQLSQVPQLPYSQT-LVSSSAPSWSSPQ---PRAPIRPIPTRFPPPP--MPLQDSMAVGCDSSGTACPSMPFAS 930
|
250 260
....*....|....*....|.
gi 1046853377 578 PVISRTKASVTTLAPKSSRPR 598
Cdd:PHA03377 931 DYSQGAFTPLDINAQTPKRPR 951
|
|
| dnaA |
PRK14086 |
chromosomal replication initiator protein DnaA; |
402-605 |
5.28e-03 |
|
chromosomal replication initiator protein DnaA;
Pssm-ID: 237605 [Multi-domain] Cd Length: 617 Bit Score: 41.35 E-value: 5.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 402 ATSDPILDSVPPKTsrtaEQPRATLAPSEASFDPRTVEIFTSPE---VRPTTA-APQQTTSIPSTPKRQSTPKP---PRv 474
Cdd:PRK14086 86 ITVDPSAGEPAPPP----PHARRTSEPELPRPGRRPYEGYGGPRaddRPPGLPrQDQLPTARPAYPAYQQRPEPgawPR- 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 475 KPAPEPETRPSAQSTKAPPHKTKKPGRRRPKTTRSPEvPKSKPALEPATVPPEilvptiVPKPPQRPKATRRPEAPQIQP 554
Cdd:PRK14086 161 AADDYGWQQQRLGFPPRAPYASPASYAPEQERDREPY-DAGRPEYDQRRRDYD------HPRPDWDRPRRDRTDRPEPPP 233
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 1046853377 555 -AHEPVTFGSEAPALAIVTTTDIAPVISRTKASVTTLAPKSSRPRTRQRPKY 605
Cdd:PRK14086 234 gAGHVHRGGPGPPERDDAPVVPIRPSAPGPLAAQPAPAPGPGEPTARLNPKY 285
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
409-492 |
5.78e-03 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 39.99 E-value: 5.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 409 DSVPPKTSRTAEQP--------RATLAPSEASFDPRTVEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEP 480
Cdd:PRK11633 54 DMMPAATQALPTQPpegaaeavRAGDAAAPSLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQKVEAPPAPKP 133
|
90
....*....|..
gi 1046853377 481 ETRPSAQSTKAP 492
Cdd:PRK11633 134 EPKPVVEEKAAP 145
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
954-1183 |
6.78e-03 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 41.21 E-value: 6.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 954 ESPQKTIAPRQTTSPPPKLKPPHSRRPAKEQVPKgslhttsKPKMPPSPEvvditsVPKDEQLSHK-----PDPEVSQSE 1028
Cdd:PTZ00449 622 KSPKRPESPKSPKRPPPPQRPSSPERPEGPKIIK-------SPKPPKSPK------PPFDPKFKEKfyddyLDAAAKSKE 688
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 1029 TVlppVTFRVEPPKTTIVPLETRDIPLIPVISPRPSEEELQTTMEQTDQSTQELFTTKIPRTTELAKTTQAPHRLHTTPV 1108
Cdd:PTZ00449 689 TK---TTVVLDESFESILKETLPETPGTPFTTPRPLPPKLPRDEEFPFEPIGDPDAEQPDDIEFFTPPEEERTFFHETPA 765
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1046853377 1109 RPRIPErphgrpALNKTTTRPDRTKSRGMSHKNGVGPGTKQTPKPSSTGRNTSVDSHATRKPGLIPGTRHRHTSP 1183
Cdd:PTZ00449 766 DTPLPD------ILAEEFKEEDIHAETGEPDEAMKRPDSPSEHEDKPPGDHPSLPKKRHRLDGLALSTTDLESDA 834
|
|
| GGN |
pfam15685 |
Gametogenetin; GGN is a family of proteins largely found in mammals. It reacts with POG in the ... |
451-607 |
7.01e-03 |
|
Gametogenetin; GGN is a family of proteins largely found in mammals. It reacts with POG in the maturation of sperm and is expressed virtually only in the testis. It is found to be associated with the intracellular membrane, binds with GGNBP1 and may be involved in vesicular trafficking.
Pssm-ID: 434857 [Multi-domain] Cd Length: 668 Bit Score: 40.91 E-value: 7.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 451 AAPQQTTSIPSTPkrQSTPKPPRVKPAPEPETRPSAQSTKAPP------HKTKKPGRRRPKTTRS--PEVPKSKPALEPA 522
Cdd:pfam15685 377 GAPRRRAAALSGP--WGSPPPPPGKAHPIPGPRRPAPALLAPPmfifpaPTNGEPVRPGPPAPQAllPRPPPPTPPATPP 454
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 523 TVPPEIlvpTIVPKPPQRPKATRRPEAPQIQPAH-EPVTFGSEAPAL--AIVTTTDIAPVISRTKASVTTLAPKSSRPRT 599
Cdd:pfam15685 455 PVPPPI---PQLPALQPMPLAAARPPTPRPCPGHgESALAPAPTAPLppALAADQAPAPALAAAPAPSPAPAPATADPLP 531
|
....*...
gi 1046853377 600 RQRPKYKA 607
Cdd:pfam15685 532 PAPAPIKA 539
|
|
| Not5 |
COG5665 |
CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription]; |
405-707 |
7.21e-03 |
|
CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription];
Pssm-ID: 444384 [Multi-domain] Cd Length: 874 Bit Score: 41.19 E-value: 7.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 405 DPILDSVPPKTSRTAEQPRATLAPSEASFDPRTVEIFTSPEVR--------------PTTAAPQQTTSIPSTPKRQSTPK 470
Cdd:COG5665 239 DPSLLATPPATPATEEKSSQQPKSQPTSPSGGTTPPSTNQLTTsntptstakaqpqpPTKKQPAKEPPSDTASGNPSAPS 318
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 471 PPRVKPAPEPETRPSAQSTKAPPHKTKKPGRRRPKTTRSPEVPKSKPALEPATVPPEILV-----------PTIVPKPPQ 539
Cdd:COG5665 319 VLINSDSPTSEDPATASVPTTEETTAFTTPSSVPSTPAEKDTPATDLATPVSPTPPETSVdkkvspdsatsSTKSEKEGG 398
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 540 RPKATRRPEAPQIQPAHEPVTFGSEAPALAIVTTTDIAPVISRTKASVTTLAPKSSR--PRTRQRPKYKATPSPKIPQTK 617
Cdd:COG5665 399 TASSPMPPNIAIGAKDDVDATDPSQEAKEYTKNAPMTPEADSAPESSVRTEASPSAGsdLEPENTTLRDPAPNAIPPPED 478
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 618 PADLGPITAEPSLASTTK--KVRRPRPKPKTTPHPEVPQTILVPATSLEPVIRTETPGTTLVPKLSQQPDFPHPKPKTTR 695
Cdd:COG5665 479 PSTIGRLSSGDKLANETGppVIRRDSTPSSTADQSIVGVLAFGLDQRTQAEISVEAASRSNPLLNSQVKSFPLGKRSEGA 558
|
330
....*....|..
gi 1046853377 696 SPAAPPTELVST 707
Cdd:COG5665 559 KGKTQTDRGISN 570
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
434-702 |
7.42e-03 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 41.21 E-value: 7.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 434 DPRTVEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQSTKAP----PHKTKKPGRRRPKTTRS 509
Cdd:PHA03378 419 DPSVIKAIEEEHRKKKAARTEQPRATPHSQAPTVVLHRPPTQPLEGPTGPLSVQAPLEPwqplPHPQVTPVILHQPPAQG 498
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 510 PEVPKSKPAL--EPATVPPEILVPTIVPKPPQRPKATRRpeAPQI----------QPAHEPVTFGSEAPALAIvTTTDIA 577
Cdd:PHA03378 499 VQAHGSMLDLleKDDEDMEQRVMATLLPPSPPQPRAGRR--APCVytedldiesdEPASTEPVHDQLLPAPGL-GPLQIQ 575
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 578 PVISRTKASVTTLAPK--------------SSRPRTRQRPKYKATPSPKIPQTKPADLGPITAEPslASTTKKVRR-PRP 642
Cdd:PHA03378 576 PLTSPTTSQLASSAPSyaqtpwpvphpsqtPEPPTTQSHIPETSAPRQWPMPLRPIPMRPLRMQP--ITFNVLVFPtPHQ 653
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1046853377 643 KPKTTPHPEVPQTILVPATSLEPviRTETPGTTLVPKLSQQPDFPHPK-PKTTRSPAAPPT 702
Cdd:PHA03378 654 PPQVEITPYKPTWTQIGHIPYQP--SPTGANTMLPIQWAPGTMQPPPRaPTPMRPPAAPPG 712
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
305-734 |
8.23e-03 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 40.67 E-value: 8.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 305 AKNETLALPAESKTPevekvagqpvtvTPETVSRSTKPTLASALDTAETAlasseepwvvpgAKTSEDSRVVQPRTATYD 384
Cdd:pfam05109 441 APNTTTGLPSSTHVP------------TNLTAPASTGPTVSTADVTSPTP------------AGTTSGASPVTPSPSPRD 496
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 385 VVSSSATSDETEvePHTATSDPILDSVPPKTSRTAEQPRATlAPSEASfdprtveifTSPEVRPTTAAPQQTTSIPSTpk 464
Cdd:pfam05109 497 NGTESKAPDMTS--PTSAVTTPTPNATSPTPAVTTPTPNAT-SPTLGK---------TSPTSAVTTPTPNATSPTPAV-- 562
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 465 rqSTPKPPRVKPAPEPETRPSAQSTKAPPHKTKKPGRRRPKTTRSPEVPKSKPALEPATVPPEILVPTIVPKppQRPKAT 544
Cdd:pfam05109 563 --TTPTPNATIPTLGKTSPTSAVTTPTPNATSPTVGETSPQANTTNHTLGGTSSTPVVTSPPKNATSAVTTG--QHNITS 638
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 545 RRPEAPQIQPAHEPVTFG--------SEAPALAIVTTTDIAPVISRTKASVTTLAPKSSRPRTRQRPKYKAT-PSPKIPQ 615
Cdd:pfam05109 639 SSTSSMSLRPSSISETLSpstsdnstSHMPLLTSAHPTGGENITQVTPASTSTHHVSTSSPAPRPGTTSQASgPGNSSTS 718
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 616 TKPADLGPITAEPslasttkkvrrprPKPKTTPHPEVPQTILVPATSLEPVIRTETPG----------TTLVPKLSQQPD 685
Cdd:pfam05109 719 TKPGEVNVTKGTP-------------PKNATSPQAPSGQKTAVPTVTSTGGKANSTTGgkhttghgarTSTEPTTDYGGD 785
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 1046853377 686 FPHPKPKTTRSPAAPPTelvSTTVFEPVIPLKEDPVTTIVPFTDLEPAT 734
Cdd:pfam05109 786 STTPRTRYNATTYLPPS---TSSKLRPRWTFTSPPVTTAQATVPVPPTS 831
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
444-700 |
9.58e-03 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 40.29 E-value: 9.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 444 PEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPEtRPSAQSTKA----------PPHKTKKPGRRRPKTTRSPEVP 513
Cdd:PLN03209 324 PSQRVPPKESDAADGPKPVPTKPVTPEAPSPPIEEEPP-QPKAVVPRPlspytayedlKPPTSPIPTPPSSSPASSKSVD 402
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 514 KSKPALEPATVPPEILVPTI-VPKPPQRPKATRRPEAPQIQ-PAHEPVTFGSEAPALAIVTTTDIAPVISRTKASvttlA 591
Cdd:PLN03209 403 AVAKPAEPDVVPSPGSASNVpEVEPAQVEAKKTRPLSPYARyEDLKPPTSPSPTAPTGVSPSVSSTSSVPAVPDT----A 478
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046853377 592 PKSSRPRTRQRPkyKATPSPKIPQTKPADLGPITAEPSLAsttkkvrrPRPKPKTTPHPEVPqtilvPATSLEPVIRTET 671
Cdd:PLN03209 479 PATAATDAAAPP--PANMRPLSPYAVYDDLKPPTSPSPAA--------PVGKVAPSSTNEVV-----KVGNSAPPTALAD 543
|
250 260 270
....*....|....*....|....*....|..
gi 1046853377 672 PGTTLVPK---LSQQPDFPHPKPKTTRSPAAP 700
Cdd:PLN03209 544 EQHHAQPKprpLSPYTMYEDLKPPTSPTPSPV 575
|
|
| |
