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Conserved domains on  [gi|1958752111|ref|XP_038958814|]
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coiled-coil domain-containing protein 169 isoform X7 [Rattus norvegicus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4600 super family cl21210
Domain of unknown function (DUF4600);
1-79 7.85e-34

Domain of unknown function (DUF4600);


The actual alignment was detected with superfamily member pfam15372:

Pssm-ID: 434673 [Multi-domain]  Cd Length: 128  Bit Score: 113.63  E-value: 7.85e-34
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1958752111   1 MPVESLNLLLKQLEKEKRSLENQVKDYALKLEQESKVFHRTNSERRSYISEMSQVSGLTQVSKRQQMDPLPRMKESPVK 79
Cdd:pfam15372  50 MSVESLKKLLKQLEKEKRSLENQLKDYELRLEQESKAYHKTNDERRAYLAEIAQLSGLDQVSKRQQMDQLHRMKENPVK 128
 
Name Accession Description Interval E-value
DUF4600 pfam15372
Domain of unknown function (DUF4600);
1-79 7.85e-34

Domain of unknown function (DUF4600);


Pssm-ID: 434673 [Multi-domain]  Cd Length: 128  Bit Score: 113.63  E-value: 7.85e-34
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1958752111   1 MPVESLNLLLKQLEKEKRSLENQVKDYALKLEQESKVFHRTNSERRSYISEMSQVSGLTQVSKRQQMDPLPRMKESPVK 79
Cdd:pfam15372  50 MSVESLKKLLKQLEKEKRSLENQLKDYELRLEQESKAYHKTNDERRAYLAEIAQLSGLDQVSKRQQMDQLHRMKENPVK 128
 
Name Accession Description Interval E-value
DUF4600 pfam15372
Domain of unknown function (DUF4600);
1-79 7.85e-34

Domain of unknown function (DUF4600);


Pssm-ID: 434673 [Multi-domain]  Cd Length: 128  Bit Score: 113.63  E-value: 7.85e-34
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1958752111   1 MPVESLNLLLKQLEKEKRSLENQVKDYALKLEQESKVFHRTNSERRSYISEMSQVSGLTQVSKRQQMDPLPRMKESPVK 79
Cdd:pfam15372  50 MSVESLKKLLKQLEKEKRSLENQLKDYELRLEQESKAYHKTNDERRAYLAEIAQLSGLDQVSKRQQMDQLHRMKENPVK 128
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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