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Conserved domains on  [gi|47576087|ref|NP_001000004|]
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olfactory receptor Olr1409 [Rattus norvegicus]

Protein Classification

olfactory receptor subfamily 1A-like( domain architecture ID 11607089)

olfactory receptor subfamily 1A-like such as human olfactory receptor 1A, 1B, 1K, 1L, 1Q and related proteins in other mammals, sauropsids, and amphibians; belong to the class A rhodopsin-like family of seven-transmembrane G protein-coupled receptors (7TM GPCRs)

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
7tmA_OR1A-like cd15235
olfactory receptor subfamily 1A and related proteins, member of the class A family of ...
26-302 1.04e-154

olfactory receptor subfamily 1A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 1A, 1B, 1K, 1L, 1Q and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


:

Pssm-ID: 320363 [Multi-domain]  Cd Length: 278  Bit Score: 433.96  E-value: 1.04e-154
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  26 QQILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYF 105
Cdd:cd15235   1 QPLLFLLFLAMYLLTLLGNLLIVLLIRSDPRLHTPMYFFLSHLSLVDICFTSTTVPKMLANLLSGSKTISYAGCLAQMYF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 106 LISFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAY 185
Cdd:cd15235  81 FIAFGNTDSFLLAVMAYDRYVAICHPLHYATVMSPKRCLLLVAGSWLLSHLHSLLHTLLMSRLSFCGS-NEIPHFFCDLQ 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 186 LLMKLACSDTRINQ-LVFLGAVVLFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRP 264
Cdd:cd15235 160 PLLKLSCSDTSLNElLIFTEGAVVVLGPFLLIVLSYARILAAVLKVPSAAGRRKAFSTCGSHLTVVALFYGTIIGVYFQP 239
                       250       260       270
                ....*....|....*....|....*....|....*....
gi 47576087 265 PDSFS-TQDTVATIMYTVVTPMLNPFIYSLRNKDMKQTV 302
Cdd:cd15235 240 SSSYSaDKDRVATVMYTVVTPMLNPFIYSLRNKDVKGAL 278
 
Name Accession Description Interval E-value
7tmA_OR1A-like cd15235
olfactory receptor subfamily 1A and related proteins, member of the class A family of ...
26-302 1.04e-154

olfactory receptor subfamily 1A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 1A, 1B, 1K, 1L, 1Q and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320363 [Multi-domain]  Cd Length: 278  Bit Score: 433.96  E-value: 1.04e-154
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  26 QQILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYF 105
Cdd:cd15235   1 QPLLFLLFLAMYLLTLLGNLLIVLLIRSDPRLHTPMYFFLSHLSLVDICFTSTTVPKMLANLLSGSKTISYAGCLAQMYF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 106 LISFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAY 185
Cdd:cd15235  81 FIAFGNTDSFLLAVMAYDRYVAICHPLHYATVMSPKRCLLLVAGSWLLSHLHSLLHTLLMSRLSFCGS-NEIPHFFCDLQ 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 186 LLMKLACSDTRINQ-LVFLGAVVLFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRP 264
Cdd:cd15235 160 PLLKLSCSDTSLNElLIFTEGAVVVLGPFLLIVLSYARILAAVLKVPSAAGRRKAFSTCGSHLTVVALFYGTIIGVYFQP 239
                       250       260       270
                ....*....|....*....|....*....|....*....
gi 47576087 265 PDSFS-TQDTVATIMYTVVTPMLNPFIYSLRNKDMKQTV 302
Cdd:cd15235 240 SSSYSaDKDRVATVMYTVVTPMLNPFIYSLRNKDVKGAL 278
7tm_4 pfam13853
Olfactory receptor; The members of this family are transmembrane olfactory receptors.
33-306 1.80e-49

Olfactory receptor; The members of this family are transmembrane olfactory receptors.


Pssm-ID: 404695  Cd Length: 278  Bit Score: 165.75  E-value: 1.80e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087    33 FLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANV 112
Cdd:pfam13853   1 FCLMYLIIFLGNGTILFVIKTESSLHQPMYLFLAMLALIDLGLSASTLPTVLGIFWFGLREISFEACLTQMFFIHKFSIM 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087   113 DTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYLLMKLAC 192
Cdd:pfam13853  81 ESAVLLAMAVDRFVAICSPLRYTTILTNPVISRIGLGVSVRSFILVLPLPFLLRRLPFCGH-HVLSHSYCLHMGLARLSC 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087   193 SDTRINQLVFLGAVV-LFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPDSFSTQ 271
Cdd:pfam13853 160 ADIKVNNIYGLFVVTsTFGIDSLLIVLSYGLILRTVLGIASREGRLKALNTCGSHVCAVLAFYTPMIGLSMVHRFGHNVP 239
                         250       260       270
                  ....*....|....*....|....*....|....*...
gi 47576087   272 DTVATIM---YTVVTPMLNPFIYSLRNKDMKQTVTRLF 306
Cdd:pfam13853 240 PLLQIMManaYLFFPPVLNPIVYSVKTKQIRDCVKRML 277
PHA02638 PHA02638
CC chemokine receptor-like protein; Provisional
104-234 1.46e-03

CC chemokine receptor-like protein; Provisional


Pssm-ID: 165021 [Multi-domain]  Cd Length: 417  Bit Score: 40.00  E-value: 1.46e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  104 YFLISFANVdtFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNR----LTFCSSIPEISH 179
Cdd:PHA02638 175 YYIGFFSNM--FLITLMSIDRYFAILYPISFQKYRTFNIGIILCIISWILSLIITSPAYFIFEAsniiFSAQDSNETISN 252
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 47576087  180 FYCDAYLlmklacsDTRINQLVFLGAVVLF-------VAPCILIVFSYVRIAMAVFQIPSAK 234
Cdd:PHA02638 253 YQCTLIE-------DNEKNNISFLGRILQFeinilgmFIPIIIFAFCYIKIILKLKQLKKSK 307
 
Name Accession Description Interval E-value
7tmA_OR1A-like cd15235
olfactory receptor subfamily 1A and related proteins, member of the class A family of ...
26-302 1.04e-154

olfactory receptor subfamily 1A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 1A, 1B, 1K, 1L, 1Q and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320363 [Multi-domain]  Cd Length: 278  Bit Score: 433.96  E-value: 1.04e-154
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  26 QQILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYF 105
Cdd:cd15235   1 QPLLFLLFLAMYLLTLLGNLLIVLLIRSDPRLHTPMYFFLSHLSLVDICFTSTTVPKMLANLLSGSKTISYAGCLAQMYF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 106 LISFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAY 185
Cdd:cd15235  81 FIAFGNTDSFLLAVMAYDRYVAICHPLHYATVMSPKRCLLLVAGSWLLSHLHSLLHTLLMSRLSFCGS-NEIPHFFCDLQ 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 186 LLMKLACSDTRINQ-LVFLGAVVLFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRP 264
Cdd:cd15235 160 PLLKLSCSDTSLNElLIFTEGAVVVLGPFLLIVLSYARILAAVLKVPSAAGRRKAFSTCGSHLTVVALFYGTIIGVYFQP 239
                       250       260       270
                ....*....|....*....|....*....|....*....
gi 47576087 265 PDSFS-TQDTVATIMYTVVTPMLNPFIYSLRNKDMKQTV 302
Cdd:cd15235 240 SSSYSaDKDRVATVMYTVVTPMLNPFIYSLRNKDVKGAL 278
7tmA_OR1_7-like cd15918
olfactory receptor families 1, 7, and related proteins, member of the class A family of ...
27-295 4.83e-144

olfactory receptor families 1, 7, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 1 and 7, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320584 [Multi-domain]  Cd Length: 270  Bit Score: 406.61  E-value: 4.83e-144
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  27 QILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFL 106
Cdd:cd15918   1 QLLFGLFLGMYLVTVLGNLLIILAIGSDSHLHTPMYFFLANLSLVDICFTSTTVPKMLVNIQTQSKSISYAGCLTQMYFF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 107 ISFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYL 186
Cdd:cd15918  81 LLFGDLDNFLLAVMAYDRYVAICHPLHYTTIMSPRLCILLVAASWVITNLHSLLHTLLMARLSFCAS-NEIPHFFCDLNP 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 187 LMKLACSDTRINQLV-FLGAVVLFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPP 265
Cdd:cd15918 160 LLKLSCSDTHLNELViLVLGGLVGLVPFLCILVSYVRIVSAVLRIPSAGGKWKAFSTCGSHLSVVSLFYGTVIGVYLSPP 239
                       250       260       270
                ....*....|....*....|....*....|.
gi 47576087 266 DSFSTQ-DTVATIMYTVVTPMLNPFIYSLRN 295
Cdd:cd15918 240 SSHSASkDSVAAVMYTVVTPMLNPFIYSLRN 270
7tmA_OR10A-like cd15225
olfactory receptor subfamily 10A and related proteins, member of the class A family of ...
28-299 1.98e-126

olfactory receptor subfamily 10A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10A, 10C, 10H, 10J, 10V, 10R, 10J, 10W, among others, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320353  Cd Length: 277  Bit Score: 362.16  E-value: 1.98e-126
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLI 107
Cdd:cd15225   2 LLFVVFLLIYLVTLLGNLLIILITKVDPALHTPMYFFLRNLSFLEICYTSVIVPKMLVNLLSEDKTISFLGCATQMFFFL 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 108 SFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYLL 187
Cdd:cd15225  82 FLGGTECFLLAAMAYDRYVAICNPLRYTLIMNRRVCLQLVAGSWLSGILVSLGQTTLIFSLPFCGS-NEINHFFCDIPPV 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 188 MKLACSDTRINQLVFLGAVVLFVA-PCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPD 266
Cdd:cd15225 161 LKLACADTSLNEIAIFVASVLVILvPFLLILVSYIFIISTILKIPSAEGRRKAFSTCSSHLIVVTLFYGCASFTYLRPKS 240
                       250       260       270
                ....*....|....*....|....*....|....
gi 47576087 267 SFST-QDTVATIMYTVVTPMLNPFIYSLRNKDMK 299
Cdd:cd15225 241 SYSPeTDKLLSLFYTVVTPMLNPIIYSLRNKEVK 274
7tmA_OR cd13954
olfactory receptors, member of the class A family of seven-transmembrane G protein-coupled ...
28-295 1.58e-124

olfactory receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320092 [Multi-domain]  Cd Length: 270  Bit Score: 357.18  E-value: 1.58e-124
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLI 107
Cdd:cd13954   2 LLFVLFLLIYLLTLLGNLLIILLVRLDSRLHTPMYFFLSNLSFLDICYTSVTVPKMLANLLSGDKTISFSGCLTQLYFFF 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 108 SFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYLL 187
Cdd:cd13954  82 SLGGTECFLLAVMAYDRYVAICHPLHYPTIMNKRVCILLAAGSWLIGFLNSLIHTVLISQLPFCGS-NVINHFFCDIPPL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 188 MKLACSDTRINQLV-FLGAVVLFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPD 266
Cdd:cd13954 161 LKLSCSDTSLNELViFILAGFVGLGSFLLTLVSYIYIISTILKIPSAEGRQKAFSTCASHLTVVSLFYGTIIFMYVRPSS 240
                       250       260       270
                ....*....|....*....|....*....|
gi 47576087 267 SFST-QDTVATIMYTVVTPMLNPFIYSLRN 295
Cdd:cd13954 241 SYSSdLDKVVSVFYTVVTPMLNPIIYSLRN 270
7tmA_OR7-like cd15234
olfactory receptor family 7 and related proteins, member of the class A family of ...
27-300 1.82e-120

olfactory receptor family 7 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 7 and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320362 [Multi-domain]  Cd Length: 277  Bit Score: 346.87  E-value: 1.82e-120
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  27 QILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFL 106
Cdd:cd15234   1 PLLFGLFLSMYLVTVLGNLLIILAVSSDSHLHTPMYFFLSNLSFADICFSSTTVPKMLVNIQTQSKSISYTGCLTQMCFF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 107 ISFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSIpEISHFYCDAYL 186
Cdd:cd15234  81 LLFGGLDNFLLAVMAYDRYVAICHPLHYTVIMNPCLCGLLVLLSLLISILDSLLHSLMVLQLSFCTDV-EIPHFFCELAQ 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 187 LMKLACSDTRINQLV-FLGAVVLFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPP 265
Cdd:cd15234 160 VLKLACSDTLINNILiYLATVIFGGIPLSGIIFSYYKIVSSILRIPSSGGKYKAFSTCGSHLSVVSLFYGTGLGVYISSA 239
                       250       260       270
                ....*....|....*....|....*....|....*.
gi 47576087 266 DSFSTQDT-VATIMYTVVTPMLNPFIYSLRNKDMKQ 300
Cdd:cd15234 240 VTHSSRKTaVASVMYTVVTPMLNPFIYSLRNKDMKG 275
7tmA_OR5-like cd15230
olfactory receptor family 5 and related proteins, member of the class A family of ...
28-295 2.66e-115

olfactory receptor family 5 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 5, some subfamilies from families 8 and 9, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320358  Cd Length: 270  Bit Score: 333.71  E-value: 2.66e-115
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLI 107
Cdd:cd15230   2 PLFVLFLLIYLITLVGNLGMIVLIRIDSRLHTPMYFFLSNLSFVDICYSSVITPKMLVNFLSEKKTISFAGCAAQFFFFA 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 108 SFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSIpEISHFYCDAYLL 187
Cdd:cd15230  82 VFGTTECFLLAAMAYDRYVAICNPLLYTVIMSKRVCIQLVAGSYLCGFVNSIVHTSSTFSLSFCGSN-VINHFFCDIPPL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 188 MKLACSDTRINQLVFLGAVVLFVAPCILIVF-SYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPD 266
Cdd:cd15230 161 LKLSCSDTHINELVLFAFSGFIGLSTLLIILiSYLYILITILRIRSAEGRRKAFSTCASHLTAVSLFYGTLIFMYLRPSS 240
                       250       260       270
                ....*....|....*....|....*....|
gi 47576087 267 SFST-QDTVATIMYTVVTPMLNPFIYSLRN 295
Cdd:cd15230 241 SYSLdQDKVVSVFYTVVIPMLNPLIYSLRN 270
7tmA_OR5V1-like cd15231
olfactory receptor subfamily 5V1 and related proteins, member of the class A family of ...
29-299 1.33e-112

olfactory receptor subfamily 5V1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5V1 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320359 [Multi-domain]  Cd Length: 277  Bit Score: 326.91  E-value: 1.33e-112
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  29 LFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLIS 108
Cdd:cd15231   3 LFLIFLIIYLVTLLGNLLIITLVLLDSHLHTPMYFFLSNLSFLDICYTSVTVPKMLVNLLRERKTISYIGCLAQLFFFVS 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 109 FANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYLLM 188
Cdd:cd15231  83 FVGTECLLLAVMAYDRYVAICNPLHYAVIMSRKVCLQLAAASWLCGFLNSAVHTVLTFRLSFCGS-NQISHFFCDIPPLL 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 189 KLACSDTRINQLVFL-GAVVLFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPDS 267
Cdd:cd15231 162 KLSCSDTSLNEVLLLvASVFIGLTPFLFIVISYVYIISTILKIRSAEGRRKAFSTCASHLTVVTLFYGTAIFNYNRPSSG 241
                       250       260       270
                ....*....|....*....|....*....|...
gi 47576087 268 FSTQ-DTVATIMYTVVTPMLNPFIYSLRNKDMK 299
Cdd:cd15231 242 YSLDkDTLISVLYSIVTPMLNPIIYSLRNKEVK 274
7tmA_OR11A-like cd15911
olfactory receptor subfamily 11A and related proteins, member of the class A family of ...
28-295 1.37e-111

olfactory receptor subfamily 11A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 11A and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320577  Cd Length: 270  Bit Score: 324.05  E-value: 1.37e-111
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLI 107
Cdd:cd15911   2 LLFLLFLVIYIVTMAGNILIIVLVVADRHLHTPMYFFLGNLSCLEICYTSTILPRMLASLLTGDRTISVSGCIVQFYFFG 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 108 SFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYLL 187
Cdd:cd15911  82 SLAATECYLLAVMSYDRYLAICKPLHYASLMNGRLCLQLAAGSWISGFLASTITVILMSQLTFCGP-NEIDHFFCDFAPL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 188 MKLACSDTRINQLV-FLGAVVLFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPD 266
Cdd:cd15911 161 LKLSCSDTSLVELVtFILSSIVTLPPFLLTLTSYICIISTILRIPSTTGRQKAFSTCSSHLIVVTIFYGTLIIVYVVPST 240
                       250       260       270
                ....*....|....*....|....*....|
gi 47576087 267 SFSTQ-DTVATIMYTVVTPMLNPFIYSLRN 295
Cdd:cd15911 241 NTSRDlNKVFSLFYTVLTPLVNPLIYSLRN 270
7tmA_OR5AP2-like cd15943
olfactory receptor subfamily 5AP2 and related proteins, member of the class A family of ...
14-306 7.44e-108

olfactory receptor subfamily 5AP2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AP2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320609 [Multi-domain]  Cd Length: 295  Bit Score: 315.84  E-value: 7.44e-108
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  14 FLLLGITNDPQQQQILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEI 93
Cdd:cd15943   2 FILLGLTDNPELQVILFAVFLVIYLITLVGNLGMIVLIRLDSRLHTPMYFFLSHLSFLDLCYSSAITPKMLVNFLAENKT 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  94 ISYAHCLTQMYFLISFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSS 173
Cdd:cd15943  82 ISFTGCAAQMYFFVAFATTECFLLAVMAYDRYVAICNPLLYTVIMSPRVCIQLVAGSYLIGFVNALIQTICTFRLPFCGS 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 174 iPEISHFYCDAYLLMKLACSDTRINQLV-FLGAVVLFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVIL 252
Cdd:cd15943 162 -NVINHFFCDVPPLLKLSCSDTHVNEIVlFAFAIFLGIFTSLEILVSYVYILSAILRIHSSEGRRKAFSTCASHLMAVTI 240
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*
gi 47576087 253 FYGTVLGIYIRPPDSFST-QDTVATIMYTVVTPMLNPFIYSLRNKDMKQTVTRLF 306
Cdd:cd15943 241 FYGTTLFMYLRPSSSYSLdQDKVVSVFYTVVIPMLNPLIYSLRNKEVKDALRRIL 295
7tmA_OR14-like cd15227
olfactory receptor family 14 and related proteins, member of the class A family of ...
30-295 4.72e-107

olfactory receptor family 14 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 14 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320355  Cd Length: 270  Bit Score: 312.85  E-value: 4.72e-107
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  30 FWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISF 109
Cdd:cd15227   4 FVLFLLIYLAALTGNLLIITVVTLDHHLHTPMYFFLKNLSFLDLCYISVTVPKSIANSLTNTRSISFLGCVAQVFLFIFF 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 110 ANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYLLMK 189
Cdd:cd15227  84 AASELALLTVMAYDRYVAICHPLHYEVIMNRGACVQMAAASWLSGLLYGALHTANTFSLPFCGS-NVIHQFFCDIPQLLK 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 190 LACSDTRINQLVFLGAVVLFVAPC-ILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPP-DS 267
Cdd:cd15227 163 LSCSDTYLNEIGVLVLSVCLGLGCfVFIIVSYVHIFSTVLRIPSAQGRSKAFSTCLPHLIVVSLFLSTGSFAYLKPPsDS 242
                       250       260
                ....*....|....*....|....*...
gi 47576087 268 FSTQDTVATIMYTVVTPMLNPFIYSLRN 295
Cdd:cd15227 243 PSLLDLLLSVFYSVVPPTLNPIIYSLRN 270
7tmA_OR6C-like cd15912
olfactory receptor subfamily 6C and related proteins, member of the class A family of ...
28-295 6.01e-105

olfactory receptor subfamily 6C and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6C, 6X, 6J, 6T, 6V, 6M, 9A, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320578  Cd Length: 270  Bit Score: 307.49  E-value: 6.01e-105
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLI 107
Cdd:cd15912   2 LLFLLLLLTYLLTLLGNLLIITITLVDHRLHTPMYFFLRNFSFLEILFTSVVIPKMLANLLSGKKTISFAGCFAQSFFYF 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 108 SFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYLL 187
Cdd:cd15912  82 FLGTTEFFLLAVMSFDRYVAICNPLHYPTIMNSRVCLQLVLGSWVGGFLLILPPTILVFQLPFCGP-NVINHFFCDSGPL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 188 MKLACSDTR-INQLVFLGAVVLFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPD 266
Cdd:cd15912 161 LKLSCSDTRlIELLDFILASVVLLGSLLLTIVSYIYIISTILRIPSASGRQKAFSTCASHLTVVSIFYGSCIFMYVRPSQ 240
                       250       260       270
                ....*....|....*....|....*....|
gi 47576087 267 SFSTQ-DTVATIMYTVVTPMLNPFIYSLRN 295
Cdd:cd15912 241 SSSLDlNKVVALLNTVVTPLLNPFIYTLRN 270
7tmA_OR5AK3-like cd15408
olfactory receptor subfamily 5AK3, 5AU1, and related proteins, member of the class A family of ...
14-299 1.10e-104

olfactory receptor subfamily 5AK3, 5AU1, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AK3, 5AU1, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320530  Cd Length: 287  Bit Score: 307.33  E-value: 1.10e-104
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  14 FLLLGITNDPQQQQILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEI 93
Cdd:cd15408   1 FILLGFTDQPELQVLLFVVFLLIYVITLVGNLGMILLIRLDSRLHTPMYFFLSHLSFLDICYSSTITPKTLLNLLAERKV 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  94 ISYAHCLTQMYFLISFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSS 173
Cdd:cd15408  81 ISFTGCLTQLYFYAVFATTECYLLAAMAYDRYVAICNPLLYTVIMSQRVCVSLVAGSYLAGFLNSTVHTGFILRLSFCGS 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 174 iPEISHFYCDAYLLMKLACSDTRINQLV---FLGAVVLFVApcILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVV 250
Cdd:cd15408 161 -NVINHFFCDGPPLLALSCSDTSLNEMLlfaFVGFNVLTTT--LVILISYTYILATILRMRSAEGRHKAFSTCASHLTAV 237
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|
gi 47576087 251 ILFYGTVLGIYIRPPDSFS-TQDTVATIMYTVVTPMLNPFIYSLRNKDMK 299
Cdd:cd15408 238 TLFYGSLAFMYLRPSSRYSlDLDKVASVFYTVVIPMLNPLIYSLRNKEVK 287
7tmA_OR2-like cd15237
olfactory receptor family 2 and related proteins, member of the class A family of ...
28-295 1.77e-104

olfactory receptor family 2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 2 and 13, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320365 [Multi-domain]  Cd Length: 270  Bit Score: 306.12  E-value: 1.77e-104
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLI 107
Cdd:cd15237   2 LLFILFLLIYLLTLLGNGLIILLIWLDSRLHTPMYFFLSNLSLLDICYTTSTVPQMLVHLLSEHKTISFVGCAAQMFFFL 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 108 SFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYLL 187
Cdd:cd15237  82 ALGVTECVLLAVMAYDRYVAICNPLRYSVIMSRRVCVRLAATSWASGFLNSLVLTSLTLRLPFCGP-NHINHFFCEAPAV 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 188 MKLACSDTRINQLV-FLGAVVLFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPD 266
Cdd:cd15237 161 LKLACADTSLNEAViFVTSVLVLLIPFSLILASYIRILATILRIQSAEGRKKAFSTCASHLTVVTLFYGTAIFMYMRPHS 240
                       250       260       270
                ....*....|....*....|....*....|
gi 47576087 267 SFST-QDTVATIMYTVVTPMLNPFIYSLRN 295
Cdd:cd15237 241 THSPdQDKMISVFYTIVTPMLNPLIYSLRN 270
7tmA_OR5D-like cd15410
olfactory receptor subfamily 5D and related proteins, member of the class A family of ...
14-306 9.91e-104

olfactory receptor subfamily 5D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5D, 5L, 5W, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320532  Cd Length: 294  Bit Score: 305.35  E-value: 9.91e-104
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  14 FLLLGITNDPQQQQILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEI 93
Cdd:cd15410   1 FILLGFTDYPELQVPLFLVFLAIYGITLLGNLGMIVLIKIDPKLHTPMYFFLSHLSFVDFCYSSVIAPKMLVNFLAEDKA 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  94 ISYAHCLTQMYFLISFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSS 173
Cdd:cd15410  81 ISYSGCMLQFFFFCTFVVTESFLLAVMAYDRYVAICNPLLYTVIMSRKLCVLLVAGSYLWGIVCSLIHTCGLLRLSFCGS 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 174 iPEISHFYCDAYLLMKLACSDTRINQLVFLGAVVLFVAPCIL-IVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVIL 252
Cdd:cd15410 161 -NVINHFFCDLPPLLSLSCSDTYLNELLLFIFGSLNEASTLLiILTSYVFIIVTILRIRSAEGRQKAFSTCASHLTAITI 239
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*
gi 47576087 253 FYGTVLGIYIRPPDSFSTQ-DTVATIMYTVVTPMLNPFIYSLRNKDMKQTVTRLF 306
Cdd:cd15410 240 FHGTILFMYCRPSSSYSLDtDKVASVFYTVVIPMLNPLIYSLRNKDVKDALRKLI 294
7tmA_OR13-like cd15232
olfactory receptor family 13 and related proteins, member of the class A family of ...
28-295 1.75e-103

olfactory receptor family 13 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 13 (subfamilies 13A1 and 13G1) and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320360 [Multi-domain]  Cd Length: 270  Bit Score: 303.80  E-value: 1.75e-103
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLI 107
Cdd:cd15232   2 LLFWLFLFLYAAALTGNSLIILAISTSPKLHTPMYFFLVNLSLVDIICTSTVVPKLLQNLLTERKTISFGGCMAQLYFFT 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 108 SFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYLL 187
Cdd:cd15232  82 WSLGSELLLLTAMAYDRYVAICHPLHYSTIMRKEVCVGLATGVWAIGMLNSAVHTGLMLRLSFCGP-NIINHFFCEIPPL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 188 MKLACSDTRINQ-LVFLGAVVLFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPD 266
Cdd:cd15232 161 LLLSCSDTSLNEiMAFVADVFFGVGNFLLTLTSYGFIIRSILRIRSTEGKKKAFSTCSSHLIVVSLYYSTVIYTYIRPSS 240
                       250       260       270
                ....*....|....*....|....*....|
gi 47576087 267 SFS-TQDTVATIMYTVVTPMLNPFIYSLRN 295
Cdd:cd15232 241 SYSpEKDKVVAVLYSVVTPTLNPLIYSLRN 270
7tmA_OR8S1-like cd15229
olfactory receptor subfamily 8S1 and related proteins, member of the class A family of ...
29-299 5.35e-103

olfactory receptor subfamily 8S1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 8S1 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320357 [Multi-domain]  Cd Length: 277  Bit Score: 302.59  E-value: 5.35e-103
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  29 LFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLIS 108
Cdd:cd15229   3 LFLVFLVIYLLTLLGNLLIMLVIRADSHLHTPMYFFLSHLSFLDICYSSVTVPKMLENLLSERKTISVEGCIAQIFFFFF 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 109 FANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYLLM 188
Cdd:cd15229  83 FAGTEAFLLSAMAYDRYAAICHPLHYVQIMSKQVCVQLVGGAWALGFLYALINTLLLLNLHFCGP-NEINHFSCELPSLL 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 189 KLACSDTRINQLVFLG-AVVLFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRP-PD 266
Cdd:cd15229 162 PLSCSDTFANKMVLLTsSVIFGLGSFLLTLVSYIHIISTILRIRSAEGRSKAFSTCSSHLTVVGLFYGTGFFRYLRPnSA 241
                       250       260       270
                ....*....|....*....|....*....|...
gi 47576087 267 SFSTQDTVATIMYTVVTPMLNPFIYSLRNKDMK 299
Cdd:cd15229 242 SSSVLDRVFSIQYSILTPMLNPIIYSLKNKEVK 274
7tmA_OR9K2-like cd15419
olfactory receptor subfamily 9K2 and related proteins, member of the class A family of ...
28-304 6.88e-103

olfactory receptor subfamily 9K2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes transmembrane olfactory receptor subfamily 9K2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320541  Cd Length: 279  Bit Score: 302.31  E-value: 6.88e-103
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLI 107
Cdd:cd15419   2 LLFLLFLVIYMVTVLGNIGMIIIISTDSRLHTPMYFFLMNLSFLDLCYSSVIAPKALANFLSESKTISYNGCAAQFFFFS 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 108 SFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYLL 187
Cdd:cd15419  82 LFGTTEGFLLAAMAYDRFIAICNPLLYPVIMSRRVCVQLVAGSYLCGCINSIIQTSFTFSLSFCGS-NEIDHFFCDVPPL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 188 MKLACSDTRINQLVFLGAVVLFVAPCILIVF-SYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPD 266
Cdd:cd15419 161 LKLSCSDTFINELVMFVLCGLIIVSTILVILvSYAYILSTILRIPSAEGRKKAFSTCASHLTAVSLFYGTVFFMYAQPGA 240
                       250       260       270
                ....*....|....*....|....*....|....*....
gi 47576087 267 -SFSTQDTVATIMYTVVTPMLNPFIYSLRNKDMKQTVTR 304
Cdd:cd15419 241 vSSPEQSKVVSVFYTLVIPMLNPLIYSLRNKDVKEALKR 279
7tmA_OR13H-like cd15431
olfactory receptor subfamily 13H and related proteins, member of the class A family of ...
28-295 9.09e-103

olfactory receptor subfamily 13H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 13H and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320548 [Multi-domain]  Cd Length: 269  Bit Score: 301.84  E-value: 9.09e-103
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLI 107
Cdd:cd15431   2 ILFVLLLIVYLVTLLGNGLIILLIRVDSQLHTPMYFFLSNLSFLDICYTTSSVPQMLVNCLSDRPTISYSRCLAQMYISL 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 108 SFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMnRLTFCSSiPEISHFYCDAYLL 187
Cdd:cd15431  82 FLGITECLLLAVMAYDRFVAICNPLRYTLIMSWRVCIQLAAGSWVSAFLLTVIPVLTM-PLHFCGP-NVINHFFCEVQAL 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 188 MKLACSDTRINQ-LVFLGAVVLFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPD 266
Cdd:cd15431 160 LKLACSDTSLNEiLMFATSIFTLLLPFSFILVSYIRIGVAVLRIRSAEGRRKAFSTCGSHLTVVTIFYGTAIFMYLRPQS 239
                       250       260       270
                ....*....|....*....|....*....|
gi 47576087 267 -SFSTQDTVATIMYTVVTPMLNPFIYSLRN 295
Cdd:cd15431 240 kSSSDQDKIISVFYGVVTPMLNPLIYSLRN 269
7tmA_OR2F-like cd15429
olfactory receptor subfamily 2F and related proteins, member of the class A family of ...
29-299 1.20e-101

olfactory receptor subfamily 2F and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2F and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320546 [Multi-domain]  Cd Length: 277  Bit Score: 299.32  E-value: 1.20e-101
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  29 LFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLIS 108
Cdd:cd15429   3 LFVLFLVMYLLTLLGNFLIILLIRLDPRLHTPMYFFLSHLSFLDICYTTSVVPQMLAHFLAEHKTISFASCVAQLFISLA 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 109 FANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCsSIPEISHFYCDAYLLM 188
Cdd:cd15429  83 LGGTEFILLAVMAYDRYVAVCHPLRYTVIMSGGLCIQLAAASWTSGFLNSLVQTAFTFRLPFC-GHNTINHFSCELLAVV 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 189 KLACSDTRINQLVFLGA-VVLFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPDS 267
Cdd:cd15429 162 RLACVDTSLNEVAILVSsVVVLLTPCFLVLLSYIHIISAILRIRSSEGRHKAFSTCASHLTVVSLCYGTAIFTYMRPRSG 241
                       250       260       270
                ....*....|....*....|....*....|...
gi 47576087 268 FST-QDTVATIMYTVVTPMLNPFIYSLRNKDMK 299
Cdd:cd15429 242 SSAlQEKMISLFYAVVTPMLNPLIYSLRNKEVK 274
7tmA_OR8H-like cd15411
olfactory receptor subfamily 8H and related proteins, member of the class A family of ...
28-304 4.36e-101

olfactory receptor subfamily 8H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8H, 8I, 5F and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320533 [Multi-domain]  Cd Length: 279  Bit Score: 298.08  E-value: 4.36e-101
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLI 107
Cdd:cd15411   2 PLFVLFLVIYVITVMGNLGMILLIRADSQLHTPMYFFLSNLSFVDFCYSSTITPKALENFLSGRKAISFAGCFVQMYFFI 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 108 SFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYLL 187
Cdd:cd15411  82 ALATTECFLLGLMAYDRYVAICNPLLYTVVMSRRVCLKLAAGSYAAGFLNSLIHTTLISRLSFCGS-NVINHFFCDTPPL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 188 MKLACSDTRINQ-LVFLGAVVLFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPD 266
Cdd:cd15411 161 LKLSCSDTHVNEmLIFILAGLTLVGSLLIILVSYTYILSTILKIRSAEGRRKAFSTCASHLTAVTIFYGTGIFTYLRPSS 240
                       250       260       270
                ....*....|....*....|....*....|....*....
gi 47576087 267 SFST-QDTVATIMYTVVTPMLNPFIYSLRNKDMKQTVTR 304
Cdd:cd15411 241 SYSLgQDKVASVFYTVVIPMLNPLIYSLRNKEVKNALRR 279
7tmA_OR5A1-like cd15417
olfactory receptor subfamily 5A1 and related proteins, member of the class A family of ...
28-304 1.09e-100

olfactory receptor subfamily 5A1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5A1, 5A2, 5AN1, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320539  Cd Length: 279  Bit Score: 296.86  E-value: 1.09e-100
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLI 107
Cdd:cd15417   2 ILFVLFLGIYLVTLLWNLGLIILIRMDSHLHTPMYFFLSNLSFVDICYSSSITPKMLSDFFREQKTISFVGCATQYFVFS 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 108 SFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYLL 187
Cdd:cd15417  82 GMGLTECFLLAAMAYDRYVAICNPLLYSVIMSPRLCVQLVAGAYLGGFLNSLIQTVSMFQLSFCGP-NVIDHFFCDIPPL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 188 MKLACSDTRINQLVFLGAVVLFVAPCILIVF-SYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPD 266
Cdd:cd15417 161 LSLSCSDTFISQVVLFLVAVLFGVFSVLVVLiSYGYIISTILKIRSAKGRSKAFNTCASHLTAVTLFYGTGLFVYLRPSS 240
                       250       260       270
                ....*....|....*....|....*....|....*....
gi 47576087 267 SFST-QDTVATIMYTVVTPMLNPFIYSLRNKDMKQTVTR 304
Cdd:cd15417 241 SHSQdQDKVASVFYTVVIPMLNPLIYSLRNKEIKDALKR 279
7tmA_OR1E-like cd15236
olfactory receptor subfamily 1E and related proteins, member of the class A family of ...
28-300 1.35e-98

olfactory receptor subfamily 1E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 1E, 1J, and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320364 [Multi-domain]  Cd Length: 277  Bit Score: 291.67  E-value: 1.35e-98
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLI 107
Cdd:cd15236   2 VFFALFLAMYLTTVLGNLLIILLIRLDSHLHTPMYFFLSHLAFTDVSFSSVTVPKMLMNMQTQDQSIPYAGCISQMYFFI 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 108 SFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYLL 187
Cdd:cd15236  82 FFGCLDSFLLAVMAYDRYVAICHPLHYTAIMRPELCVLLVAGSWVLTCFHALLHTLLLARLSFCAD-NVIPHFFCDLVAL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 188 MKLACSDTRINQLV-FLGAVVLFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPD 266
Cdd:cd15236 161 LKLSCSSTSLNELViFTEGGLLFVLPLLLILGSYIRIAATILKVPSTKGICKAFSTCGSHLSVVFLYYGTIIGVYFFPSS 240
                       250       260       270
                ....*....|....*....|....*....|....*
gi 47576087 267 SFST-QDTVATIMYTVVTPMLNPFIYSLRNKDMKQ 300
Cdd:cd15236 241 NNSSdKDIVASVMYTVVTPMLNPFIYSLRNRDIKG 275
7tmA_OR2T-like cd15421
olfactory receptor subfamily 2T and related proteins, member of the class A family of ...
27-297 4.59e-97

olfactory receptor subfamily 2T and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamilies 2T, 2M, 2L, 2V, 2Z, 2AE, 2AG, 2AK, 2AJ, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320543  Cd Length: 277  Bit Score: 287.52  E-value: 4.59e-97
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  27 QILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFL 106
Cdd:cd15421   1 LFLFSLILLIFLVALTGNALLILLIWLDSRLHTPMYFLLSQLSLMDLMLISTTVPKMATNFLSGRKSISFVGCGTQIFFF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 107 ISFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYL 186
Cdd:cd15421  81 LTLGGAECLLLALMAYDRYVAICHPLRYPVLMSPRVCLLMAAGSWLGGSLNSLIHTVYTMHFPYCGS-REIHHFFCEVPA 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 187 LMKLACSDTRINQL-VFLGAVVLFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPP 265
Cdd:cd15421 160 LLKLSCADTSAYETvVYVSGVLFLLIPFSLILASYALILLTVLRMRSAEGRKKALATCSSHLTVVSLYYGPAIFTYMRPG 239
                       250       260       270
                ....*....|....*....|....*....|...
gi 47576087 266 DSFST-QDTVATIMYTVVTPMLNPFIYSLRNKD 297
Cdd:cd15421 240 SYHSPeQDKVVSVFYTILTPMLNPLIYSLRNKE 272
7tmA_OR2B-like cd15947
olfactory receptor subfamily 2B and related proteins, member of the class A family of ...
28-295 6.30e-97

olfactory receptor subfamily 2B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 2 (subfamilies 2B, 2C, 2G, 2H, 2I, 2J, 2W, 2Y) and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320613 [Multi-domain]  Cd Length: 270  Bit Score: 286.83  E-value: 6.30e-97
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLI 107
Cdd:cd15947   2 PLFVVVLIFYLLTLLGNTAIILLSLLDPRLHTPMYFFLSNLSFLDLCFTTSIVPQMLVNLWGPDKTISYGGCVTQLYIFL 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 108 SFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYLL 187
Cdd:cd15947  82 WLGSTECVLLAVMAFDRYVAVCRPLHYTVIMHPRLCVQLAALSWLSGLANSLLQTTLTLQLPLCGH-HTLDHFFCEVPAL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 188 MKLACSDTRINQL-VFLGAVVLFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPD 266
Cdd:cd15947 161 IKLACVDTTFNELeLFVASVFFLLVPLSLILVSYGFIARAVLRIKSAEGRRKAFGTCSSHLLVVSLFYGTAIYMYLQPPS 240
                       250       260       270
                ....*....|....*....|....*....|
gi 47576087 267 SFS-TQDTVATIMYTVVTPMLNPFIYSLRN 295
Cdd:cd15947 241 SYSqDQGKFISLFYTVVTPTLNPLIYTLRN 270
7tmA_OR5M-like cd15412
olfactory receptor subfamily 5M and related proteins, member of the class A family of ...
28-304 4.16e-96

olfactory receptor subfamily 5M and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5M and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320534  Cd Length: 279  Bit Score: 285.45  E-value: 4.16e-96
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLI 107
Cdd:cd15412   2 LLFVLFLVIYLITLLGNLGMILLIRLDSRLHTPMYFFLSHLSFVDLCYSSNVTPKMLVNFLSEKKTISFAGCFTQCYFFI 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 108 SFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSIpEISHFYCDAYLL 187
Cdd:cd15412  82 ALVITEYYMLAVMAYDRYMAICNPLLYSVKMSRRVCISLVTFPYIYGFLNGLIQTILTFRLSFCGSN-VINHFYCADPPL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 188 MKLACSDTRINQL-VFLGAVVLFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPD 266
Cdd:cd15412 161 IKLSCSDTYVKETaMFIVAGFNLSSSLLIILISYLFILIAILRIRSAEGRCKAFSTCGSHLTAVTIFYGTLFCMYLRPPS 240
                       250       260       270
                ....*....|....*....|....*....|....*....
gi 47576087 267 SFST-QDTVATIMYTVVTPMLNPFIYSLRNKDMKQTVTR 304
Cdd:cd15412 241 EESVeQSKIVAVFYTFVSPMLNPLIYSLRNKDVKQALKK 279
7tmA_OR2A-like cd15420
olfactory receptor subfamily 2A and related proteins, member of the class A family of ...
29-299 2.47e-95

olfactory receptor subfamily 2A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2A and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320542 [Multi-domain]  Cd Length: 277  Bit Score: 283.06  E-value: 2.47e-95
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  29 LFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLIS 108
Cdd:cd15420   3 LFGLFSLLYIFTLLGNGLILGLIWLDSRLHTPMYFFLSHLAVVDICYASSTVPHMLGNLLKQRKTISFAGCGTQMYLFLA 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 109 FANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYLLM 188
Cdd:cd15420  83 LAHTECVLLAVMSYDRYVAICHPLRYTVIMNWRVCTTLAATSWACGFLLALVHVVLLLRLPFCGP-NEVNHFFCEILAVL 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 189 KLACSDTRINQ-LVFLGAVVLFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPDS 267
Cdd:cd15420 162 KLACADTWINEiLIFAGCVFILLGPFSLILISYLHILAAILKIQSAEGRRKAFSTCSSHLCVVGLFYGTAMFMYMVPGSS 241
                       250       260       270
                ....*....|....*....|....*....|...
gi 47576087 268 FST-QDTVATIMYTVVTPMLNPFIYSLRNKDMK 299
Cdd:cd15420 242 NSAeQEKILSLFYSLFNPMLNPLIYSLRNKQVK 274
7tmA_OR6B-like cd15224
olfactory receptor subfamily 6B and related proteins, member of the class A family of ...
29-295 3.56e-95

olfactory receptor subfamily 6B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6B, 6A, 6Y, 6P, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320352  Cd Length: 270  Bit Score: 282.63  E-value: 3.56e-95
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  29 LFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLIS 108
Cdd:cd15224   3 LFLLFLIAYVLTLLENLLIILTIWLNSQLHKPMYFFLSNLSFLEIWYISVTVPKLLAGFLSQNKSISFVGCMTQLYFFLS 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 109 FANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYLLM 188
Cdd:cd15224  83 LACTECVLLAVMAYDRYVAICHPLRYPVIMTHQLCVQLAAGSWLSGFLISMIKVYFISQLSFCGP-NVINHFFCDISPLL 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 189 KLACSDTRINQLV-FLGAVVLFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPP-- 265
Cdd:cd15224 162 NLSCTDMSLAELVdFILALIILLVPLLVTVASYICIISTVLRIPSATGRQKAFSTCASHLTVVIIFYSATLFMYARPKai 241
                       250       260       270
                ....*....|....*....|....*....|
gi 47576087 266 DSFSTQDTVaTIMYTVVTPMLNPFIYSLRN 295
Cdd:cd15224 242 SSFDSNKLV-SVLYTVVTPLLNPIIYCLRN 270
7tmA_OR5P-like cd15416
olfactory receptor subfamily 5P and related proteins, member of the class A family of ...
28-304 4.51e-94

olfactory receptor subfamily 5P and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5P and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320538 [Multi-domain]  Cd Length: 279  Bit Score: 280.02  E-value: 4.51e-94
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLI 107
Cdd:cd15416   2 ILFVLFLVIYSVTLLGNLSIILLIRISSQLHTPMYFFLSHLAFSDICYSSSVTPKMLVNFLVEKTTISYPGCAAQLCSAA 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 108 SFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSIpEISHFYCDAYLL 187
Cdd:cd15416  82 TFGTVECFLLAAMAYDRYVAICNPLLYSTIMSQKVCVLLVAASYLGGCLNALVFTTCVFSLSFCGPN-EINHFFCDFPPL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 188 MKLACSDTRINQLV--FLGAVVLFVAPCIlIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPP 265
Cdd:cd15416 161 LKLSCSDIRLAKILpsISSGIIILVTVLT-IIISYLYILIAILRIRSTEGRHKAFSTCASHLTAVTLFYGTITFIYVMPN 239
                       250       260       270       280
                ....*....|....*....|....*....|....*....|
gi 47576087 266 DSFST-QDTVATIMYTVVTPMLNPFIYSLRNKDMKQTVTR 304
Cdd:cd15416 240 SSYSMdQNKVVSVFYMVVIPMLNPLIYSLRNKEVKGALKR 279
7tmA_OR8D-like cd15406
olfactory receptor subfamily 8D and related proteins, member of the class A family of ...
18-305 5.55e-94

olfactory receptor subfamily 8D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8D and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320528 [Multi-domain]  Cd Length: 290  Bit Score: 280.41  E-value: 5.55e-94
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  18 GITNDPQQQQILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYA 97
Cdd:cd15406   1 GLTDQPELQLPLFLLFLGIYVVTVVGNLGMILLITLSSQLHTPMYYFLSNLSFIDLCYSSVITPKMLVNFVSEKNIISYP 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  98 HCLTQMYFLISFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEI 177
Cdd:cd15406  81 ECMTQLFFFCVFAIAECYMLTAMAYDRYVAICNPLLYNVTMSPRVCSLLVAGVYIMGLIGATVHTSCMLRLSFCGD-NVI 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 178 SHFYCDAYLLMKLACSDTRINQ-LVFLGAVVLFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGT 256
Cdd:cd15406 160 NHYFCDILPLLKLSCSSTYINElLLFIVGGFNVLATTLAILISYAFILSSILRIRSAEGRSKAFSTCSSHLAAVGVFYGS 239
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|
gi 47576087 257 VLGIYIRPPDSFS-TQDTVATIMYTVVTPMLNPFIYSLRNKDMKQTVTRL 305
Cdd:cd15406 240 IIFMYLKPSSSSSmTQEKVSSVFYTTVIPMLNPLIYSLRNKDVKNALKKV 289
7tmA_OR5H-like cd15409
olfactory receptor subfamily 5H and related proteins, member of the class A family of ...
28-304 1.55e-93

olfactory receptor subfamily 5H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5H, 5K, 5AC, 5T and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320531 [Multi-domain]  Cd Length: 279  Bit Score: 278.91  E-value: 1.55e-93
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLI 107
Cdd:cd15409   2 PLFLVFLAIYLITLVGNLGLIALIWKDSHLHTPMYFFLGNLAFADACTSSSVTPKMLVNFLSKNKMISFSGCAAQFFFFG 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 108 SFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYLL 187
Cdd:cd15409  82 FSATTECFLLAAMAYDRYVAICNPLLYPVVMSNRLCVQLITASYIGGFLHSMIHVGLTFRLSFCGS-NEINHFFCDIPPL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 188 MKLACSDTRINQLV---FLGAVVLFVAPCILIvfSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRP 264
Cdd:cd15409 161 LKISCTDPSINELVlfiFSGSIQVFTILTVLI--SYSYILFTILKMKSAEGRRKAFSTCGSHLLSVSLFYGSLFFMYVRP 238
                       250       260       270       280
                ....*....|....*....|....*....|....*....|.
gi 47576087 265 PDSFST-QDTVATIMYTVVTPMLNPFIYSLRNKDMKQTVTR 304
Cdd:cd15409 239 SSLYALdQDMMDSLFYTIVIPLLNPFIYSLRNKEVIDALRK 279
7tmA_OR13-like cd15430
olfactory receptor family 13 and related proteins, member of the class A family of ...
28-295 2.75e-92

olfactory receptor family 13 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 13 (subfamilies 13C, 13D, 13F, and 13J), some subfamilies from OR family 2 (2K and 2S), and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320547 [Multi-domain]  Cd Length: 270  Bit Score: 275.40  E-value: 2.75e-92
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLI 107
Cdd:cd15430   2 LLFVLCLIMYLVILLGNGVLIIITILDSHLHTPMYFFLGNLSFLDICYTSSSVPLMLVNFLSERKTISFSGCAVQMYLSL 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 108 SFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYLL 187
Cdd:cd15430  82 AMGSTECVLLAVMAYDRYVAICNPLRYPIIMNKRLCVQMAAGSWVTGFLNSLVETVLAMQLPFCGN-NVINHFTCEILAV 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 188 MKLACSDTRINQLVFL-GAVVLFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRP-P 265
Cdd:cd15430 161 LKLACVDISLNEIIMLvGNIIFLVIPLLLICISYIFILSTILRINSAEGRKKAFSTCSAHLTVVIIFYGTILFMYMKPkS 240
                       250       260       270
                ....*....|....*....|....*....|
gi 47576087 266 DSFSTQDTVATIMYTVVTPMLNPFIYSLRN 295
Cdd:cd15430 241 KNAQISDKLITLFYGVVTPMLNPIIYSLRN 270
7tmA_OR12D-like cd15915
olfactory receptor subfamily 12D and related proteins, member of the class A family of ...
27-295 5.19e-90

olfactory receptor subfamily 12D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 12D and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320581 [Multi-domain]  Cd Length: 271  Bit Score: 269.56  E-value: 5.19e-90
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  27 QILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFL 106
Cdd:cd15915   1 IFLFVLFLLLYLASLLGNGAILAVVIAEPRLHSPMYFFLGNLSCLDIFYSSVTVPKMLAGLLSEHKTISFQGCISQLHFF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 107 ISFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYL 186
Cdd:cd15915  81 HFLGSSEAMLLAVMAYDRYVAICNPLRYTVIMNPQVCLLLAVACWVTGFFHALMHTVMTSRLPFCGP-NKINHFFCDIKP 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 187 LMKLACSDTRINQ-LVFLGAVVLFVAPCILIVFSYVRIAMAVFQIP-SAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRP 264
Cdd:cd15915 160 LLKLACGDTSLNLwLLNIVTGSIALGTFILTLLSYIYIISFLLLKVrSKEGRHKAFSTCASHLTVVLLLYGPALFTYIRP 239
                       250       260       270
                ....*....|....*....|....*....|..
gi 47576087 265 PDSFST-QDTVATIMYTVVTPMLNPFIYSLRN 295
Cdd:cd15915 240 SSGDSLeQDRIVALLYTVVTPVLNPLIYTLRN 271
7tmA_OR5AR1-like cd15944
olfactory receptor subfamily 5AR1 and related proteins, member of the class A family of ...
14-306 1.17e-89

olfactory receptor subfamily 5AR1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AR1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320610 [Multi-domain]  Cd Length: 294  Bit Score: 269.35  E-value: 1.17e-89
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  14 FLLLGITNDPQQQQILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEI 93
Cdd:cd15944   1 FILLGFTQDPQMQIILFVVFLIIYLVNVVGNLGMIILITTDSQLHTPMYFFLCNLSFCDLGYSSAIAPRMLADFLTKHKV 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  94 ISYAHCLTQMYFLISFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSS 173
Cdd:cd15944  81 ISFSGCATQFAFFVGFVDAECYVLAAMAYDRYVAICNPLLYSTLMSKRVCLQLMAGSYLAGLVNLVIHTTATFSLSFCGS 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 174 iPEISHFYCDAYLLMKLACSDTRINQ-LVFLGAVVLFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVIL 252
Cdd:cd15944 161 -NIINHFFCDVPPLLALSCSDTHINEiLLYVFCGFVEMSSLSIILISYLFILVAILRMRSAEGRRKAFSTCASHFTGVTL 239
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*
gi 47576087 253 FYGTVLGIYIRPPDSFS-TQDTVATIMYTVVTPMLNPFIYSLRNKDMKQTVTRLF 306
Cdd:cd15944 240 FYGTVIFMYLRPTSVYSlDQDKWASVFYTVVIPMLNPLIYSLRNKDVKEAFKKLI 294
7tmA_OR6N-like cd15914
olfactory receptor OR6N and related proteins, member of the class A family of ...
28-295 2.30e-89

olfactory receptor OR6N and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6N, 6K, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320580 [Multi-domain]  Cd Length: 270  Bit Score: 267.70  E-value: 2.30e-89
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLI 107
Cdd:cd15914   2 LLFILLLLIYLFIITGNLLIFTVVRLDTHLHTPMYFFISILSFLEIWYTTVTIPKMLSNLLSEEKTISFNGCLLQMYFFH 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 108 SFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYLL 187
Cdd:cd15914  82 SLGITECYLLTAMAYDRYLAICNPLHYPSIMTPKLCTQLAAGCWLCGFLGPVPEIILISTLPFCGP-NQIQHIFCDFPPL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 188 MKLACSDTRINQLV-FLGAVVLFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPD 266
Cdd:cd15914 161 LSLACTDTSLNVLVdFVIHAVIILLTFLLILLSYVKIISVVLKIPSAEGRQKAFSTCAAHLTVVLLFFGSVSFMYLRLSK 240
                       250       260       270
                ....*....|....*....|....*....|
gi 47576087 267 SFS-TQDTVATIMYTVVTPMLNPFIYSLRN 295
Cdd:cd15914 241 SYSlDYDRAIAVVYAVLTPFFNPIIYSLRN 270
7tmA_OR2W-like cd15434
olfactory receptor subfamily 2W and related proteins, member of the class A family of ...
28-302 9.53e-89

olfactory receptor subfamily 2W and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2W and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320551 [Multi-domain]  Cd Length: 277  Bit Score: 266.55  E-value: 9.53e-89
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLI 107
Cdd:cd15434   2 ILSVVVLIFYLLTLVGNTTIILVSCLDSRLHTPMYFFLANLSFLDLCFTTSIIPQMLVNLWGPDKTISYVGCAIQLFIAL 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 108 SFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSIpEISHFYCDAYLL 187
Cdd:cd15434  82 GLGGTECVLLAVMAYDRYAAVCQPLHYTVVMHPRLCWKLVAMSWLIGFGNSLVLSPLTLSLPRCGHH-RVDHFFCEMPAL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 188 MKLACSDTR-INQLVFLGAVVLFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPD 266
Cdd:cd15434 161 IKLACVDTTaYEATIFALGVFILLFPLSLILVSYGYIARAVLKIKSAAGRKKAFGTCGSHLTVVSLFYGTIIYMYLQPKN 240
                       250       260       270
                ....*....|....*....|....*....|....*..
gi 47576087 267 SFS-TQDTVATIMYTVVTPMLNPFIYSLRNKDMKQTV 302
Cdd:cd15434 241 SVSqDQGKFLTLFYTIVTPSLNPLIYTLRNKDVKGAL 277
7tmA_OR8K-like cd15413
olfactory receptor subfamily 8K and related proteins, member of the class A family of ...
28-299 9.81e-89

olfactory receptor subfamily 8K and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8K, 8U, 8J, 5R, 5AL and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320535  Cd Length: 279  Bit Score: 266.50  E-value: 9.81e-89
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLI 107
Cdd:cd15413   2 PLFGLFLVIYLTTVMGNLGMIILTRLDSRLQTPMYFFLRHLAFVDLGYSTAVTPKMLVNFVVEQNTISFYACATQLAFFL 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 108 SFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYLL 187
Cdd:cd15413  82 TFIISELFLLSAMAYDRYVAICNPLLYTVIMSQRVCIVLVAIPYLYSFFVALFHTIKTFRLSFCGS-NVINHFYCDDLPL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 188 MKLACSDTRINQLVFLGAVVLFVAPCILIVF-SYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPD 266
Cdd:cd15413 161 LALSCSDTHEKELIILIFAGFNLISSLLIVLvSYLFILSAILRIRSAEGRQKAFSTCGSHLTVVTIFYGTLIFMYLQPKS 240
                       250       260       270
                ....*....|....*....|....*....|....
gi 47576087 267 SFSTQ-DTVATIMYTVVTPMLNPFIYSLRNKDMK 299
Cdd:cd15413 241 SHSLDtDKMASVFYTLVIPMLNPLIYSLRNKEVK 274
7tmA_OR5C1-like cd15945
olfactory receptor subfamily 5C1 and related proteins, member of the class A family of ...
14-304 6.20e-88

olfactory receptor subfamily 5C1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5C1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320611  Cd Length: 292  Bit Score: 265.07  E-value: 6.20e-88
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  14 FLLLGITNDPQQQQILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEI 93
Cdd:cd15945   1 FILLGFTDYLSLKVTLFLVFLLVYLLTLVGNVGMIILIRMDSQLHTPMYYFLSNLSFLDLCYSTAIGPKMLVDLLAKRKS 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  94 ISYAHCLTQMYFLISFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSS 173
Cdd:cd15945  81 IPFYGCALQMFFFAAFADAECLLLAVMAYDRYVAICNPLLYTTAMSRRVCYLLLVGAYLSGMATSLVHTTLTFRLSFCGS 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 174 iPEISHFYCDAYLLMKLACSDTRINQLVFLgAVVLFVAPCIL--IVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVI 251
Cdd:cd15945 161 -NTINHFFCDIPPLLALSCSDTQINELLLF-ALCGFIQTSTFlaIIISYCYIIITVLKIRSAEGRFKAFSTCASHLTAVG 238
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....
gi 47576087 252 LFYGTVLGIYIRPPDSFS-TQDTVATIMYTVVTPMLNPFIYSLRNKDMKQTVTR 304
Cdd:cd15945 239 LFYGTLLFMYLRPSSSYSlDTDKMTSVFYTLVIPMLNPLIYSLRNKDVKEALKK 292
7tmA_OR5G-like cd15414
olfactory receptor subfamily 5G and related proteins, member of the class A family of ...
28-308 4.43e-87

olfactory receptor subfamily 5G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5G and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320536 [Multi-domain]  Cd Length: 285  Bit Score: 262.36  E-value: 4.43e-87
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLI 107
Cdd:cd15414   2 PLFLLFLLVYLITLLGNLGMIILIQVDSRLHTPMYFFLSHLSFVDLCYSSVVTPKMLSDFFVEKKAISFLGCAAQMWFFG 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 108 SFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYLL 187
Cdd:cd15414  82 LFVAAECFLLASMAYDRYVAICNPLLYTVIMSQRVCVQLVVGPYVVGLLNTTTHTTAAFFLPFCGP-NVINHFFCDIPPL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 188 MKLACSDTRINQLV-FLGAVVLFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPD 266
Cdd:cd15414 161 LSLSCADTQINKWVlFIMAGALGVLSGLIILVSYIYILIAILRIRSAEGRRKAFSTCSSHLTAVSILYGTLFFIYVRPSS 240
                       250       260       270       280
                ....*....|....*....|....*....|....*....|...
gi 47576087 267 SFST-QDTVATIMYTVVTPMLNPFIYSLRNKDMKQTVTRLFNR 308
Cdd:cd15414 241 SSSLdLDKVVSVFYTAVIPMLNPLIYSLRNKEVKDALRRTIRR 283
7tmA_OR4A-like cd15939
olfactory receptor 4A and related proteins, member of the class A family of ...
27-295 1.80e-84

olfactory receptor 4A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4A, 4C, 4P, 4S, 4X and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320605 [Multi-domain]  Cd Length: 267  Bit Score: 255.22  E-value: 1.80e-84
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  27 QILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFL 106
Cdd:cd15939   1 KICFVVFLLIYLATVLGNLLIVVTIKASQTLGSPMYFFLSYLSFIDICYSSTTAPKLIVDLLSERKTISFNGCMTQLFAE 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 107 ISFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYL 186
Cdd:cd15939  81 HFFGGAEIFLLTVMAYDRYVAICKPLHYTTIMNRRVCGLLVGVAWVGGFLHSTIQILLTLQLPFCGP-NVIDHFFCDLFP 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 187 LMKLACSDTR-INQLVFLGAVVLFVAPCILIVFSYVRIaMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPP 265
Cdd:cd15939 160 LLKLACTDTYvIGLLVVANSGLICLLSFLILLISYIVI-LYSLRTHSSEGRRKALSTCGSHITVVVLFFVPCIFIYMRPV 238
                       250       260       270
                ....*....|....*....|....*....|
gi 47576087 266 DSFSTqDTVATIMYTVVTPMLNPFIYSLRN 295
Cdd:cd15939 239 TTFPI-DKVVAVFYTIITPMLNPLIYTLRN 267
7tmA_OR9G-like cd15418
olfactory receptor subfamily 9G and related proteins, member of the class A family of ...
26-305 2.25e-84

olfactory receptor subfamily 9G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 9G and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320540 [Multi-domain]  Cd Length: 281  Bit Score: 255.48  E-value: 2.25e-84
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  26 QQILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYF 105
Cdd:cd15418   1 QLILFVVFLLSYILTLVGNLTLIALICLDSRLHTPMYFFVGNLSFLDLWYSSVYTPKILADCISKDKSISFAGCAAQFFF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 106 LISFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAY 185
Cdd:cd15418  81 SAGLAYSECFLLAAMAYDRYVAICNPLLYSSAMSKKLCMGLVAASYLGGFANAIIHTSNTFRLHFCGD-NIIDHFFCDLP 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 186 LLMKLACSDTRINQLVFLGAVVL-FVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRP 264
Cdd:cd15418 160 PLVKLACDDTRVYELILYFILGFnVIAPTALILASYTFILAAILRIHSASGRHKAFSTCSAHLTSVTLYYGSILFIYSRP 239
                       250       260       270       280
                ....*....|....*....|....*....|....*....|..
gi 47576087 265 PDSFSTQ-DTVATIMYTVVTPMLNPFIYSLRNKDMKQTVTRL 305
Cdd:cd15418 240 SSSHTPDrDKVVALFYTVVNPLLNPLIYSLRNKDVKEALKKL 281
7tmA_OR5J-like cd15415
olfactory receptor subfamily 5J and related proteins, member of the class A family of ...
29-304 4.10e-84

olfactory receptor subfamily 5J and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5J and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320537 [Multi-domain]  Cd Length: 279  Bit Score: 254.65  E-value: 4.10e-84
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  29 LFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLIS 108
Cdd:cd15415   3 LFMLFLLIYFITLLGNLGMIVLIRINPQLHTPMYFFLSNLSFVDLCYSSVFAPRLLVNFLVEKKTISYSACIAQHFFFAV 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 109 FANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYLLM 188
Cdd:cd15415  83 FVTTEGFLLAVMAYDRYVAICNPLLYTVAMTKRVCVQLVAGSYLGGLINSLTHTIGLLKLSFCGP-NVINHYFCDIPPLL 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 189 KLACSDTRINQ---LVFLGAVVLFVapCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPP 265
Cdd:cd15415 162 KLSCSDTHINElllLTFSGVIAMST--LLTIIISYIFILFAILRIRSAEGRRKAFSTCASHLTAVTLFYGSVSFSYIQPS 239
                       250       260       270       280
                ....*....|....*....|....*....|....*....|
gi 47576087 266 DSFST-QDTVATIMYTVVTPMLNPFIYSLRNKDMKQTVTR 304
Cdd:cd15415 240 SQYSLeQEKVSAVFYTLVIPMLNPLIYSLRNKDVKDALKR 279
7tmA_OR2_unk cd15424
olfactory receptor family 2, unknown subfamily, member of the class A family of ...
28-302 1.13e-83

olfactory receptor family 2, unknown subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents an unknown subfamily, conserved in some mammalia and sauropsids, in family 2 of olfactory receptors. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320544 [Multi-domain]  Cd Length: 277  Bit Score: 253.50  E-value: 1.13e-83
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLI 107
Cdd:cd15424   2 LLFVVILIIYLLTILGNLVIIILVQTDSRLHTPMYFFLSHLAGLEICYVTSTLPQMLAHLLAGNGAISFARCTTQMYIAL 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 108 SFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYLL 187
Cdd:cd15424  82 SLGSTECLLLGAMAYDRYLAICHPLLYAAAMGRWRQLQLALSCWAIGFLLSVINVGCTLRHPFCGP-NHINHFFCELPVV 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 188 MKLACSDTRINQ-LVFLGAVVLFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRP-P 265
Cdd:cd15424 161 LKLACADTHITEaIVFGAGVLILLVPLSVILTSYGLILASVLQMQSAAGRHKAFSTCASHLAVVTLFYGTVISMYMRPrS 240
                       250       260       270
                ....*....|....*....|....*....|....*..
gi 47576087 266 DSFSTQDTVATIMYTVVTPMLNPFIYSLRNKDMKQTV 302
Cdd:cd15424 241 GSTPDRDKQIAVFYIVITPLLNPIIYTLRNKDVHGAA 277
7tmA_OR10G-like cd15916
olfactory receptor subfamily 10G and related proteins, member of the class A family of ...
29-299 9.29e-82

olfactory receptor subfamily 10G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 10G, 10S, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320582 [Multi-domain]  Cd Length: 276  Bit Score: 248.52  E-value: 9.29e-82
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  29 LFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVS-GTEIISYAHCLTQMYFLI 107
Cdd:cd15916   3 LFLIFLIIYLLTVLGNLLILLTVWVDSHLHRPMYIFLGHLSFLDMWLSTVTVPKMLAGFLEpGGKVISFGGCVAQLYFFH 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 108 SFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSIpEISHFYCDAYLL 187
Cdd:cd15916  83 FLGSTECFLYTLMAYDRYLAICHPLHYPTIMTGRLCTRLATGTWVAGSLHSAIHTSLTFRLPFCGPN-RIDYFFCDIPPL 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 188 MKLACSDTRINQLVFLGAVVLFVAPC-ILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPD 266
Cdd:cd15916 162 LKLACADTTINELVIFASIGVVALGCfILILLSYGNIVRAILRIRTAEGRRRAFSTCASHLIVVLCFYVPCVFIYLRPGS 241
                       250       260       270
                ....*....|....*....|....*....|...
gi 47576087 267 SFSTQDTVAtIMYTVVTPMLNPFIYSLRNKDMK 299
Cdd:cd15916 242 KEALDGVIA-VFYTVVTPLLNPLIYTLRNKEVK 273
7tmA_OR2D-like cd15428
olfactory receptor subfamily 2D and related proteins, member of the class A family of ...
27-299 1.78e-81

olfactory receptor subfamily 2D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320545 [Multi-domain]  Cd Length: 277  Bit Score: 247.78  E-value: 1.78e-81
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  27 QILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFL 106
Cdd:cd15428   1 ILLFILFLIIYLMTVLGNLLLVLLVIVDSHLHTPMYFFLSNLSVLELCYTTTVVPQMLVHLLSERKIISFIRCAAQLYFF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 107 ISFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYL 186
Cdd:cd15428  81 LSFGITECALLSVMSYDRYVAICLPLRYSLIMTWKVCISLATGSWVGGLLVSAVDTAFTLNLSFGGH-NKINHFLCEMPA 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 187 LMKLACSDTRINQLV-FLGAVVLFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPP 265
Cdd:cd15428 160 LLKLASTDTHQAEMAmFIMCVFTLVLPVLLILASYTRIIYTVFGMQSLTGRLKAFSTCSSHLMVVSLFYGSVLSTYMRPK 239
                       250       260       270
                ....*....|....*....|....*....|....*
gi 47576087 266 DSFSTQ-DTVATIMYTVVTPMLNPFIYSLRNKDMK 299
Cdd:cd15428 240 SSTSKEyDKMISVFYIIVTPMLNPLIYSLRNKEVK 274
7tmA_OR11G-like cd15913
olfactory receptor OR11G and related proteins, member of the class A family of ...
28-295 3.53e-81

olfactory receptor OR11G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 11G, 11H, and related proteins in other mammals, and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320579  Cd Length: 270  Bit Score: 246.84  E-value: 3.53e-81
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLI 107
Cdd:cd15913   2 LLFSFFSVIYILTLLGNGAIICAVWWDRRLHTPMYILLGNFSFLEICYVTSTVPNMLVNFLSETKTISFSGCFLQFYFFF 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 108 SFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYLL 187
Cdd:cd15913  82 SLGTTECFFLSVMAFDRYLAICRPLHYPTIMTGQLCGKLVAFCWVCGFLWFLIPVVLISQLPFCGP-NIIDHFLCDPGPL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 188 MKLACSDTRINQLVF--LGAVVLFvAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPP 265
Cdd:cd15913 161 LALSCVPAPGTELICytLSSLIIF-GTFLFILGSYTLVLRAVLRVPSAAGRHKAFSTCGSHLAVVSLFYGSVMVMYVSPG 239
                       250       260       270
                ....*....|....*....|....*....|.
gi 47576087 266 DSFSTQDT-VATIMYTVVTPMLNPFIYSLRN 295
Cdd:cd15913 240 SGNSTGMQkIVTLFYSVVTPLLNPLIYSLRN 270
7tmA_OR3A-like cd15233
olfactory receptor subfamily 3A3 and related proteins, member of the class A family of ...
28-299 8.67e-81

olfactory receptor subfamily 3A3 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 3A3 and 3A4, and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320361 [Multi-domain]  Cd Length: 277  Bit Score: 246.24  E-value: 8.67e-81
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLI 107
Cdd:cd15233   2 VLFVTFLLAYIVTIGGNLSILAAILLEPKLHTPMYFFLGNLSLLDIGCISVTVPQMLVHLLSHKRTISYAACLSQLFFFH 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 108 SFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYLL 187
Cdd:cd15233  82 LLAGADCFLLTAMAYDRYLAICQPLTYSVRMSWRVQTALVGISCACAFTNALTHTVAMSTLKFCGP-NVINHFFCDLPPL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 188 MKLACSDTRIN-QLVFLGAVVLFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPD 266
Cdd:cd15233 161 FQLSCSSTHLNeLLLFVFAFFMALAPCVLIVVSYAHVVAAVLRIRSAEGRRKAFSTCGSHLTVVCIFYGTGVFSYMRLGS 240
                       250       260       270
                ....*....|....*....|....*....|....
gi 47576087 267 SFST-QDTVATIMYTVVTPMLNPFIYSLRNKDMK 299
Cdd:cd15233 241 VYSSdKDKVIGILNTVLSPMLNPLIYSLRNKDVK 274
7tmA_OR10D-like cd15228
olfactory receptor subfamily 10D and related proteins, member of the class A family of ...
28-299 1.17e-80

olfactory receptor subfamily 10D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 10D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320356 [Multi-domain]  Cd Length: 275  Bit Score: 245.80  E-value: 1.17e-80
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLI 107
Cdd:cd15228   2 ILFVLFLAFYLCTLLGNLLILSAILSDPRLHTPMYFFLCNLSVFDIGFSSVSTPKMLAYLWGQSRVISLGGCMSQVFFYH 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 108 SFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYLL 187
Cdd:cd15228  82 FLGSTECLLYTVMAYDRYVAICHPLRYLLIMNRRVCALLAAGTWITSSFHATILTSLTFTLPYCGS-NVVDYFFCDIFPV 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 188 MKLACSDTRINQLVFLGAVVLFVAPC-ILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPD 266
Cdd:cd15228 161 LKLACADTSIAETVSFTNVGLVPLTCfLLILASYVRIVISILKMRSAEGRRKAFSTCSSHLTVVTLFFGPCALIYTQPTP 240
                       250       260       270
                ....*....|....*....|....*....|...
gi 47576087 267 SfSTQDTVATIMYTVVTPMLNPFIYSLRNKDMK 299
Cdd:cd15228 241 S-PVLVTPVQIFNNVVTPMLNPLIYTLRNKEVK 272
7tmA_OR5B-like cd15407
olfactory receptor subfamily 5B and related proteins, member of the class A family of ...
29-299 1.45e-80

olfactory receptor subfamily 5B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5B and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320529  Cd Length: 279  Bit Score: 245.79  E-value: 1.45e-80
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  29 LFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLIS 108
Cdd:cd15407   3 LFIIFTLIYLITLVGNLGMILLILLDSRLHTPMYFFLSNLSLVDIGYSSAVTPKVMAGLLTGDKVISYNACAAQMFFFVV 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 109 FANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYLLM 188
Cdd:cd15407  83 FATVENFLLASMAYDRHAAVCKPLHYTTTMTTKVCACLTIGCYVCGFLNASIHTGNTFRLSFCKS-NVINHFFCDIPPVL 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 189 KLACSDTRINQLV--FLGAVVLFVApCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPD 266
Cdd:cd15407 162 ALSCSDIHISEIVlfFLASFNVFFA-LLVILISYLFIFITILRMRSAEGHQKAFSTCASHLTAVSIFYGTVIFMYLQPSS 240
                       250       260       270
                ....*....|....*....|....*....|....
gi 47576087 267 SFSTQ-DTVATIMYTVVTPMLNPFIYSLRNKDMK 299
Cdd:cd15407 241 SHSMDtDKMASVFYTMVIPMLNPLVYSLRNKEVK 274
7tmA_OR2B2-like cd15432
olfactory receptor subfamily 2B2 and related proteins, member of the class A family of ...
28-302 2.94e-80

olfactory receptor subfamily 2B2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes transmembrane olfactory receptor subfamily 2B2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320549 [Multi-domain]  Cd Length: 277  Bit Score: 244.70  E-value: 2.94e-80
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLI 107
Cdd:cd15432   2 VLFVVFLIFYILTLLGNLAIILVSRLDPQLHTPMYFFLSNLSLLDLCYTTSTVPQMLVNLRSPQKTISYGGCVAQLFIFL 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 108 SFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYLL 187
Cdd:cd15432  82 GLGSTECVLLAVMAFDRFAAICQPLHYSVIMHQRLCQQLAAGAWISGFANSLVQSTLTLKMPRCGR-RRVDHFFCEVPAL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 188 MKLACSDTRINQL-VFLGAVVLFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPD 266
Cdd:cd15432 161 LKLSCVDTTANEAeLFVISVLLLLIPLGLILISYIFIVRAVLRIRSAEGRRKAFNTCGSHLLVVSLFYGTAISMYLQPPS 240
                       250       260       270
                ....*....|....*....|....*....|....*..
gi 47576087 267 SFS-TQDTVATIMYTVVTPMLNPFIYSLRNKDMKQTV 302
Cdd:cd15432 241 NSShDRGKMVALFYGIITPMLNPLIYTLRNKDVKEAL 277
7tmA_OR4E-like cd15940
olfactory receptor 4E and related proteins, member of the class A family of ...
28-295 4.79e-80

olfactory receptor 4E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4E and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320606 [Multi-domain]  Cd Length: 267  Bit Score: 243.89  E-value: 4.79e-80
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLI 107
Cdd:cd15940   2 AFFMLFLVLYLLTLSGNILIMITIVMDPRLHTPMYFFLSNLSFIDICHSSVTVPKMLSDLLSEEKTISFNGCVTQLFFLH 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 108 SFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYLL 187
Cdd:cd15940  82 LFACTEIFLLTIMAYDRYVAICNPLHYPTVMNHKVCLWLVAALWLGGTVHSLAQTFLTIRLPYCGP-NEIDSFFCDVPPV 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 188 MKLACSDTRINQLVFLGAVVLFVAPCILI-VFSYVRIAMAVFQIpSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPD 266
Cdd:cd15940 161 IKLACTDTYLIDILIVSNSGLISLVCFVAlLGSYIVILVSLRKR-STEGRRKALSTCASHLTVVTLFFGPCIFIYTRPST 239
                       250       260
                ....*....|....*....|....*....
gi 47576087 267 SFStQDTVATIMYTVVTPMLNPFIYSLRN 295
Cdd:cd15940 240 SFS-EDKVVSVFYTVVTPLLNPIIYTLRN 267
7tmA_OR8B-like cd15405
olfactory receptor subfamily 8B and related proteins, member of the class A family of ...
29-299 7.90e-79

olfactory receptor subfamily 8B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8B and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320527 [Multi-domain]  Cd Length: 277  Bit Score: 241.17  E-value: 7.90e-79
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  29 LFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLIS 108
Cdd:cd15405   3 LFFLFLGIYVVTVVGNLGLITLICLNSHLHTPMYFFLFNLSFIDLCYSSVFTPKMLMNFVSEKNTISYAGCMTQLFFFCF 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 109 FANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYLLM 188
Cdd:cd15405  83 FVISECYVLTAMAYDRYVAICNPLLYTVTMSPQVCSLLMLGSYVMGFAGAMAHTGCMLRLTFCDS-NIINHYMCDILPLL 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 189 KLACSDTRINQLVFLGAV-VLFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPDS 267
Cdd:cd15405 162 QLSCTSTYVNELVVFVVVgINIIVPSVTIFISYALILSNILHISSTEGRSKAFSTCSSHIIAVSLFFGSGAFMYLKPSSV 241
                       250       260       270
                ....*....|....*....|....*....|...
gi 47576087 268 FST-QDTVATIMYTVVTPMLNPFIYSLRNKDMK 299
Cdd:cd15405 242 GSVnQGKVSSVFYTNVVPMLNPLIYSLRNKDVK 274
7tmA_OR4-like cd15226
olfactory receptor family 4 and related proteins, member of the class A family of ...
29-295 9.53e-79

olfactory receptor family 4 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 4 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320354 [Multi-domain]  Cd Length: 267  Bit Score: 240.57  E-value: 9.53e-79
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  29 LFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLIS 108
Cdd:cd15226   3 LFVFFSLFYVATVLGNLLIVVTVTSDPHLHSPMYFLLANLSFIDLCLSSFATPKMICDLLREHKTISFGGCMAQIFFLHF 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 109 FANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYLLM 188
Cdd:cd15226  83 FGGSEMVLLIAMAFDRYVAICKPLHYLTIMSPRMCILLVVASWIIGFIHSLSQLAFVVNLPFCGP-NVVDSFFCDLPLVI 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 189 KLACSDT-RINQLVFLGAVVLFVAPCILIVFSYVRIAMAVfQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPDS 267
Cdd:cd15226 162 KLACTDTyVLELMVVANSGLISLVCFLLLLISYIVILVTV-RKHSSGGSSKALSTCSAHITVVVLFFGPCIFIYVWPFST 240
                       250       260
                ....*....|....*....|....*...
gi 47576087 268 FSTqDTVATIMYTVVTPMLNPFIYSLRN 295
Cdd:cd15226 241 FPV-DKFLAVFYTVITPLLNPIIYTLRN 267
7tmA_OR10G6-like cd15942
olfactory receptor subfamily 10G6 and related proteins, member of the class A family of ...
29-302 3.81e-76

olfactory receptor subfamily 10G6 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10G6 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320608  Cd Length: 275  Bit Score: 234.25  E-value: 3.81e-76
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  29 LFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLIS 108
Cdd:cd15942   3 LFLFFLVVYLLTLSGNSLIILVVISDLQLHKPMYWFLCHLSILDMAVSTVVVPKVIAGFLSGGRIISFGGCVTQLFFFHF 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 109 FANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYLLM 188
Cdd:cd15942  83 LGCAECFLYTVMAYDRFLAICKPLHYSTIMNHRACLCLSLGTWLGGCLHSTFQTSLTFRLPYGQK-NEVDYIFCDIPAML 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 189 KLACSDTRINQLVFLGAVVLFVAPCI-LIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRpPDS 267
Cdd:cd15942 162 KLACADTAFNELVTFIDIGLVAMTCFlLILMSYVYIVSAILKIPSAEGQRRAFSTCTAHLTVVVIYYVPLTFIYLR-PGS 240
                       250       260       270
                ....*....|....*....|....*....|....*
gi 47576087 268 FSTQDTVATIMYTVVTPMLNPFIYSLRNKDMKQTV 302
Cdd:cd15942 241 QDPLDGVVAVFYTTVTPLLNPVIYTLRNKEMKDAL 275
7tmA_OR1330-like cd15946
olfactory receptor 1330 and related proteins, member of the class A family of ...
28-295 1.77e-75

olfactory receptor 1330 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes olfactory receptors 1330 from mouse, Olr859 from rat, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320612  Cd Length: 270  Bit Score: 232.37  E-value: 1.77e-75
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLI 107
Cdd:cd15946   2 ILFAVFLLIYLSILLGNGLIITLICLDSRLHTPMYFFLSVLSLLDMSYVTTTVPQMLVHLLSHKKTISFTGCVAQMYIFL 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 108 SFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYLL 187
Cdd:cd15946  82 ALGITECTLFSVMAYDRYVAICHPLRYKVIMSWGLCILMVAGSWVCGVFSSLLHTFFTMRLPYCGP-NEINHYFCEVPAV 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 188 MKLACSDTRINQLV-FLGAVVLFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPD 266
Cdd:cd15946 161 LKLACADTSLNEMVdFVLGVIVLVVPLSLILASYVNIFKAILKIRSTQGRCKAFSTCASHITVVTMFYGPAMFMYMRPGS 240
                       250       260       270
                ....*....|....*....|....*....|
gi 47576087 267 SFSTQ-DTVATIMYTVVTPMLNPFIYSLRN 295
Cdd:cd15946 241 NYSPErDKKISLFYNVFTALLNPVIYSLRN 270
7tmA_OR10S1-like cd15941
olfactory receptor subfamily 10S1 and related proteins, member of the class A family of ...
28-302 1.81e-75

olfactory receptor subfamily 10S1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10S1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320607 [Multi-domain]  Cd Length: 277  Bit Score: 232.82  E-value: 1.81e-75
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCMYLVTVAGNTLIFLAISSDPRLHT-PMYFFLANLSFVDVCFTTNLIPRLLASHVSGT-EIISYAHCLTQMYF 105
Cdd:cd15941   2 LFFLLFLLIYLLTVLGNLLILLTIGSDPHLHGlPMYHFLGHLSFLDACLSSVTVPKVLAGLLTLSgRTISFEGCVVQLYA 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 106 LISFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAY 185
Cdd:cd15941  82 FHFLASTECFLYTVMAYDRYLAICHPLHYPTAMNRRMCAGLAGGTWATGATHAAIHTSLTFRLPYCGP-CQIAYFFCDIP 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 186 LLMKLACSDTRINQLVFLGAVVLFVAPC-ILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRP 264
Cdd:cd15941 161 PVLKLACADTTINELVILANIGIVAAGCfLLIVISYIYIVAAVLRIRTAEGRQRAFSTCSAHLTGVLLYYVPSVFIYLQP 240
                       250       260       270
                ....*....|....*....|....*....|....*...
gi 47576087 265 PDSFSTQDTVAtIMYTVVTPMLNPFIYSLRNKDMKQTV 302
Cdd:cd15941 241 SSSQAGAGAPA-VFYTIVTPMLNPFIYTLRNKEVKRAL 277
7tmA_OR4D-like cd15936
olfactory receptor 4D and related proteins, member of the class A family of ...
27-295 8.31e-75

olfactory receptor 4D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320602 [Multi-domain]  Cd Length: 267  Bit Score: 230.68  E-value: 8.31e-75
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  27 QILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFL 106
Cdd:cd15936   1 FFLFLVFLLVYLTTWLGNLLIIITVISDPHLHTPMYFLLANLAFLDISFSSVTAPKMLSDLLSQTKTISFNGCMAQMFFF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 107 ISFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYL 186
Cdd:cd15936  81 HFTGGAEVFLLSVMAYDRYIAIHKPLHYLTIMNQGVCTGLVAGSWLGGFAHSIVQVALLLQLPFCGP-NVLDNFYCDVPQ 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 187 LMKLACSDTRINQL--VFLGAVVLFVAPCILIVfSYVRIAMAVfQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRP 264
Cdd:cd15936 160 VIKLACTDTFLLELlmVSNSGLVTLLIFFILLI-SYTVILVKI-RTHVTEGKRKALSTCASQITVVTLIFVPCIYIYARP 237
                       250       260       270
                ....*....|....*....|....*....|.
gi 47576087 265 PDSFSTqDTVATIMYTVVTPMLNPFIYSLRN 295
Cdd:cd15936 238 FQTFPM-DKAVSVLYTVITPMLNPMIYTLRN 267
7tmA_OR2Y-like cd15433
olfactory receptor subfamily 2Y and related proteins, member of the class A family of ...
28-299 9.84e-73

olfactory receptor subfamily 2Y and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2Y, 2I, and related protein in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320550 [Multi-domain]  Cd Length: 277  Bit Score: 225.44  E-value: 9.84e-73
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLI 107
Cdd:cd15433   2 VLFVVVLIFYLLTLVGNTIIILLSVRDLRLHTPMYYFLCHLSFVDLCFTTSTVPQLLANLRGPALTITRGGCVAQLFISL 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 108 SFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCsSIPEISHFYCDAYLL 187
Cdd:cd15433  82 ALGSAECVLLAVMAFDRYAAVCRPLHYAALMSPRLCQTLASISWLSGFVNSVAQTGLLAERPLC-GHRLLDHFFCEMPVF 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 188 MKLACSDTRINQL-VFLGAVVLFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPD 266
Cdd:cd15433 161 LKLACGDDETTEVqMFVARVVILLLPAALILGSYGHVAHAVLRIKSSAGRRRAFGTCGSHLMVVFLFYGSAIYTYLQPIH 240
                       250       260       270
                ....*....|....*....|....*....|....
gi 47576087 267 SFS-TQDTVATIMYTVVTPMLNPFIYSLRNKDMK 299
Cdd:cd15433 241 RYSqAHGKFVSLFYTVMTPALNPLIYTLRNKDVK 274
7tmA_OR56-like cd15223
olfactory receptor family 56 and related proteins, member of the class A family of ...
29-300 2.15e-69

olfactory receptor family 56 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 56 and related proteins in other mammals, sauropsids, and fishes. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320351 [Multi-domain]  Cd Length: 279  Bit Score: 217.16  E-value: 2.15e-69
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  29 LFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLIS 108
Cdd:cd15223   3 LSLPFLLLYLVALVANSLLLLIIKLERSLHQPMYILLGILAAVDIVLATTILPKMLAIFWFDANTISLPGCFAQMFFIHF 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 109 FANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYLLM 188
Cdd:cd15223  83 FTAMESSILLVMALDRYVAICKPLRYPSIITKSFILKLVLFALIRSGLLVLPIVVLASQLSYCSS-NVIEHCYCDHMALV 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 189 KLACSDTRINQLV-FLGAVVLFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYI----- 262
Cdd:cd15223 162 SLACGDTTINSIYgLAVAWLIVGSDIILIFFSYALILRAVLRLASGEARSKALNTCGSHLIVILFFYTAVLVSSLtyrfg 241
                       250       260       270       280
                ....*....|....*....|....*....|....*....|
gi 47576087 263 --RPPDSfstqDTVATIMYTVVTPMLNPFIYSLRNKDMKQ 300
Cdd:cd15223 242 ktIPPDV----HVLLSVLYILIPPALNPIIYGVRTKEIRQ 277
7tmA_OR51_52-like cd15917
olfactory receptor family 51, 52, 56 and related proteins, member of the class A family of ...
33-298 4.98e-67

olfactory receptor family 51, 52, 56 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 51, 52, 56, and related proteins in other mammals, sauropsids, amphibians, and fishes. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 341351  Cd Length: 275  Bit Score: 210.99  E-value: 4.98e-67
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  33 FLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANV 112
Cdd:cd15917   7 FCAMYLVALLGNITILFVIKIESSLHEPMYLFLAMLAATDLVLSTSTVPKMLGIFWFNAREISFDACLAQMFFIHSFTAM 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 113 DTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYLLMKLAC 192
Cdd:cd15917  87 ESGVLLAMAFDRYVAICYPLRYTTILTNTVVGKIGLAILLRAVALIIPLPLLVRRLPYCGS-NVISHSYCEHMAVVKLAC 165
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 193 SDTRINQLVFL-GAVVLFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYI-------RP 264
Cdd:cd15917 166 GDTRVNSIYGLfVALLIVGFDLLFIALSYVLILRAVLQLPSKEARLKALSTCGSHICVILIFYTPALFSFLthrfghhVP 245
                       250       260       270
                ....*....|....*....|....*....|....
gi 47576087 265 PdsfSTQDTVAtIMYTVVTPMLNPFIYSLRNKDM 298
Cdd:cd15917 246 P---HVHILLA-NLYLLLPPMLNPIVYGVRTKQI 275
7tmA_OR51-like cd15222
olfactory receptor family 51 and related proteins, member of the class A family of ...
33-296 2.10e-64

olfactory receptor family 51 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 51 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320350  Cd Length: 275  Bit Score: 204.27  E-value: 2.10e-64
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  33 FLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANV 112
Cdd:cd15222   7 FCLLYLVALLGNSTILFVIKTEPSLHEPMYYFLSMLAVTDLGLSLSTLPTVLGIFWFNAREISFDACLAQMFFIHTFSFM 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 113 DTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYLLMKLAC 192
Cdd:cd15222  87 ESSVLLAMAFDRFVAICNPLRYASILTNSRIAKIGLAIVLRSVLLLLPLPFLLKRLPFCHS-NVLSHSYCLHQDVMKLAC 165
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 193 SDTRINQLVFLGAVVL-FVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYI--RPPDSFS 269
Cdd:cd15222 166 SDTRVNSIYGLFVVLStMGLDSLLILLSYVLILKTVLGIASREERLKALNTCVSHICAVLIFYVPMIGLSMvhRFGKHAS 245
                       250       260       270
                ....*....|....*....|....*....|
gi 47576087 270 TQdtVATIM---YTVVTPMLNPFIYSLRNK 296
Cdd:cd15222 246 PL--VHVLManvYLLVPPVLNPIIYSVKTK 273
7tmA_OR52E-like cd15952
olfactory receptor subfamily 52E and related proteins, member of the class A family of ...
33-296 8.67e-63

olfactory receptor subfamily 52E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52E and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320618  Cd Length: 274  Bit Score: 199.91  E-value: 8.67e-63
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  33 FLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANV 112
Cdd:cd15952   7 FCAVYLIALLGNCTILFVIKTEQSLHQPMFYFLAMLSTIDLGLSTATIPKMLGIFWFNLREISFGGCLAQMFFIHTFTGM 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 113 DTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSsIPEISHFYCDAYLLMKLAC 192
Cdd:cd15952  87 ESAVLVAMAFDRYVAICNPLRYTTILTNKVISVIALGIVLRPLLLVLPFVFLILRLPFCG-HNIIPHTYCEHMGIAKLAC 165
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 193 SDTRINQLVFLGAVVLFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGiyirppdSFSTQD 272
Cdd:cd15952 166 ASIRINIIYGLFAISVLVLDVILIALSYVLILRAVFRLPSHDARLKALSTCGSHVCVILAFYTPALF-------SFLTHR 238
                       250       260       270
                ....*....|....*....|....*....|....
gi 47576087 273 TVATI----------MYTVVTPMLNPFIYSLRNK 296
Cdd:cd15952 239 FGHNIpryihillanLYVVLPPMLNPVIYGVRTK 272
7tmA_OR4Q3-like cd15935
olfactory receptor 4Q3 and related proteins, member of the class A family of ...
28-295 1.53e-62

olfactory receptor 4Q3 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 4Q3 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320601 [Multi-domain]  Cd Length: 268  Bit Score: 199.22  E-value: 1.53e-62
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCMYLVTVAGNTLIFLAISSDPRL-HTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFL 106
Cdd:cd15935   2 LLFVLVLACYAAILLGNLLIVVTVHADPHLlQSPMYFFLANLSLIDMTLGSVAVPKVLADLLTCGRTISFGGCMAQLFFL 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 107 ISFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYL 186
Cdd:cd15935  82 HFLGGSEMLLLTLMAYDRYVAICHPLRYLAVMNRQLCIKLLAACWAGGFLHSATQAALVLRLPFCGP-NELDNFYCDVPQ 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 187 LMKLACSDTRINQLVFLGAVVLFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPD 266
Cdd:cd15935 161 VIKLACMDTYVVEVLMVANSGLLSLVCFLVLLVSYGIILTTLRGRFREGGGKALSTCSSHLTVVSLIFVPCIFVYLRPFS 240
                       250       260
                ....*....|....*....|....*....
gi 47576087 267 SFSTqDTVATIMYTVVTPMLNPFIYSLRN 295
Cdd:cd15935 241 SSSV-DKVASVFYTLITPALNPLIYTLRN 268
7tmA_OR52I-like cd15950
olfactory receptor subfamily 52I and related proteins, member of the class A family of ...
33-296 3.22e-62

olfactory receptor subfamily 52I and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52I and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320616  Cd Length: 275  Bit Score: 198.79  E-value: 3.22e-62
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  33 FLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANV 112
Cdd:cd15950   7 FCSMYVIALLGNGTILLVIKLDPSLHEPMYYFLCMLAVIDLVMSTSIVPKMLSIFWLGSAEISFEACFTQMFFVHSFTAV 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 113 DTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSIPeISHFYCDAYLLMKLAC 192
Cdd:cd15950  87 ESGVLLAMAFDRYVAICHPLRYSAILTSQVIAQIGLAIVLRALLFMTPLTCLVTSLPYCGSRV-VPHSYCEHMAVVKLAC 165
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 193 SDTRINQLVFLGAVVLFVAP-CILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFY-GTVLGIYIrppDSFS- 269
Cdd:cd15950 166 ADPRPSSLYSITGSTLVVGTdSAFIAVSYGLILRAVLGLSSKEARLKAFSTCGSHVCVILLFYiPGLLSIYT---QRFGq 242
                       250       260       270
                ....*....|....*....|....*....|..
gi 47576087 270 -----TQDTVATiMYTVVTPMLNPFIYSLRNK 296
Cdd:cd15950 243 gvpphTQVLLAD-LYLLVPPMLNPIIYGMRTK 273
7tmA_OR4Q2-like cd15938
olfactory receptor 4Q2 and related proteins, member of the class A family of ...
29-295 1.93e-61

olfactory receptor 4Q2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 4Q2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320604 [Multi-domain]  Cd Length: 265  Bit Score: 196.25  E-value: 1.93e-61
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  29 LFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLIS 108
Cdd:cd15938   3 LFALFLLAYTMVLVGNLLIMVTVRSDPKLSSPMYFLLGNLSFLDLCYSTVTCPKMLVDFLSQRKAISYEACIAQLFFLHF 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 109 FANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYLLM 188
Cdd:cd15938  83 VGAAEMFLLTVMAYDRYVAICKPLHYTTIMSRRLCWVLVAASWAGGFLHSIVQTLLTIQLPFCGP-NQVNNFFCDVPPVI 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 189 KLACSDTRINQLVFLGAVVLFVAPCILI-VFSYVRIamaVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPDS 267
Cdd:cd15938 162 KLACTDTCVTELLMVSNSGLISTVCFVVlVTSYTTI---LVTIRSTEGRRKALSTCASHLMVVTLFFGPCIFIYARPFST 238
                       250       260
                ....*....|....*....|....*...
gi 47576087 268 FSTqDTVATIMYTVVTPMLNPFIYSLRN 295
Cdd:cd15938 239 FPV-DKHVSVLYNVITPMLNPLIYTLRN 265
7tmA_OR52R_52L-like cd15951
olfactory receptor subfamily 52R, 52L, and related proteins, member of the class A family of ...
33-296 1.68e-57

olfactory receptor subfamily 52R, 52L, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamilies 52R, 52L and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320617  Cd Length: 275  Bit Score: 186.40  E-value: 1.68e-57
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  33 FLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANV 112
Cdd:cd15951   7 FCIMYAVALLGNFTILFIVKTEPSLHEPMYLFLCMLAITDLVLSTSTLPKMLSIFWFNSREIDFSACLTQMFFIHSFSTM 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 113 DTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYLLMKLAC 192
Cdd:cd15951  87 ESGIFVAMALDRYVAICNPLRHSTILTNSVVAKIGLAVVLRGGILVSPHPFLLRRLPYCRT-NIIPHTYCEHMAVVKLAC 165
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 193 SDTRINQLVFLgAVVLFVAPC--ILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVL--------GIYI 262
Cdd:cd15951 166 ADTRVSRAYGL-SVAFLVGGLdvIFIAVSYIQILRAVFKLPSKEARLKTFGTCGSHICVILVFYIPALfsflthrfGHNV 244
                       250       260       270
                ....*....|....*....|....*....|....
gi 47576087 263 RPPdsfsTQDTVATiMYTVVTPMLNPFIYSLRNK 296
Cdd:cd15951 245 PPH----VHILIAN-VYLLVPPMLNPIIYGVRTK 273
7tmA_OR52B-like cd15221
olfactory receptor subfamily 52B and related proteins, member of the class A family of ...
33-296 2.72e-57

olfactory receptor subfamily 52B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor (OR) subfamilies 52B, 52D, 52H and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320349  Cd Length: 275  Bit Score: 185.96  E-value: 2.72e-57
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  33 FLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANV 112
Cdd:cd15221   7 FCSMYIVALLGNSLLLFVIVTERSLHEPMYLFLSMLAVTDLLLSTTTVPKMLAIFWFGAGEISFDGCLTQMFFVHFVFVT 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 113 DTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYLLMKLAC 192
Cdd:cd15221  87 ESAILLAMAFDRYVAICYPLRYTTILTHSVIGKIGVAAVARSFCIVFPFVFLLKRLPYCGH-NVIPHTYCEHMGIARLAC 165
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 193 SDTRINqlVFLGAVVLFVAP---CILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYgtVLGIYirppdSFS 269
Cdd:cd15221 166 ADITVN--IWYGLTVALLTVgldVVLIAVSYALILRAVFRLPSKDARLKALSTCGSHVCVILMFY--TPAFF-----SFL 236
                       250       260       270
                ....*....|....*....|....*....|....*..
gi 47576087 270 TQDTVATI----------MYTVVTPMLNPFIYSLRNK 296
Cdd:cd15221 237 THRFGRHIprhvhillanLYVLVPPMLNPIVYGVKTK 273
7tmA_OR52P-like cd15953
olfactory receptor subfamily 52P and related proteins, member of the class A family of ...
33-296 5.76e-57

olfactory receptor subfamily 52P and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52P and related proteins in other mammals, sauropsids and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 341354  Cd Length: 275  Bit Score: 185.16  E-value: 5.76e-57
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  33 FLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANV 112
Cdd:cd15953   7 FCLMYIVTLLGNCTILFVVGKEQSLHKPMYLLLCMLALTDLVLSTSVVPKALCIFWFNLKEITFSGCLTQMFFIHTLSIM 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 113 DTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYLLMKLAC 192
Cdd:cd15953  87 ESAVLVAMAFDRYVAICNPLRYATILTNSRIAKLGLVGLIRGVLLILPLPLLLSRLPFCAN-RIIPHTYCEHMAVVKLAC 165
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 193 SDTRINQLVFLGAVVLFVA-PCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPDSFSTQ 271
Cdd:cd15953 166 GDTTINRIYGLVVALLVVGlDLLLIALSYALIIRAVLRLSSKKARQKALNTCTAHICVILMSYTPALFSFLTHRFGQGIA 245
                       250       260
                ....*....|....*....|....*...
gi 47576087 272 DTVATIM---YTVVTPMLNPFIYSLRNK 296
Cdd:cd15953 246 PHIHIILanlYLLVPPMLNPIIYGVKTK 273
7tmA_OR4N-like cd15937
olfactory receptor 4N, 4M, and related proteins, member of the class A family of ...
28-295 1.46e-56

olfactory receptor 4N, 4M, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4N, 4M, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320603  Cd Length: 267  Bit Score: 183.78  E-value: 1.46e-56
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLI 107
Cdd:cd15937   2 LLFVLFLLFYLIILPGNILIILTIQGDPQLGSPMYFFLANLALLDICYSSITPPKMLADFFSERKTISYGGCMAQLFFLH 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 108 SFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYLL 187
Cdd:cd15937  82 FLGAAEMFLLVAMAYDRYVAICKPLHYTTVVNRRVCCVLVGASWAGGFIHSIIQVALIIRLPFCGP-NVLDNFFCDITQV 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 188 MKLACSDTRINQLV-FLGAVVLFVAPCILIVFSYVRIaMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPD 266
Cdd:cd15937 161 IKLACTNTYTVELLmFSNSGLVILLCFLLLLISYAFL-LAKLRTHSSKGKSKAASTCITHIIIVFVMFGPAIYIYARPFR 239
                       250       260
                ....*....|....*....|....*....
gi 47576087 267 SFSTqDTVATIMYTVVTPMLNPFIYSLRN 295
Cdd:cd15937 240 SFPM-DKVVAVFHTVIFPLLNPMIYTLRN 267
7tm_4 pfam13853
Olfactory receptor; The members of this family are transmembrane olfactory receptors.
33-306 1.80e-49

Olfactory receptor; The members of this family are transmembrane olfactory receptors.


Pssm-ID: 404695  Cd Length: 278  Bit Score: 165.75  E-value: 1.80e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087    33 FLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANV 112
Cdd:pfam13853   1 FCLMYLIIFLGNGTILFVIKTESSLHQPMYLFLAMLALIDLGLSASTLPTVLGIFWFGLREISFEACLTQMFFIHKFSIM 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087   113 DTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYLLMKLAC 192
Cdd:pfam13853  81 ESAVLLAMAVDRFVAICSPLRYTTILTNPVISRIGLGVSVRSFILVLPLPFLLRRLPFCGH-HVLSHSYCLHMGLARLSC 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087   193 SDTRINQLVFLGAVV-LFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPDSFSTQ 271
Cdd:pfam13853 160 ADIKVNNIYGLFVVTsTFGIDSLLIVLSYGLILRTVLGIASREGRLKALNTCGSHVCAVLAFYTPMIGLSMVHRFGHNVP 239
                         250       260       270
                  ....*....|....*....|....*....|....*...
gi 47576087   272 DTVATIM---YTVVTPMLNPFIYSLRNKDMKQTVTRLF 306
Cdd:pfam13853 240 PLLQIMManaYLFFPPVLNPIVYSVKTKQIRDCVKRML 277
7tmA_OR52K-like cd15948
olfactory receptor subfamily 52K and related proteins, member of the class A family of ...
33-299 1.39e-47

olfactory receptor subfamily 52K and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52K and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320614 [Multi-domain]  Cd Length: 277  Bit Score: 160.84  E-value: 1.39e-47
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  33 FLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANV 112
Cdd:cd15948   8 FCSAFTVALLGNCTLLYVIKTEPSLHEPMFYFLAMLAVIDLVLSTTTVPKILSIFWFNSREINFNACLVQMFFLHSFSIM 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 113 DTFLLAAMALDRFVAICYPLQYHTIITPQLC--VGLAAVVWICSGLISLvhTLLMNRLTFCSSiPEISHFYCDAYLLMKL 190
Cdd:cd15948  88 ESAVLLAMAFDRYVAICNPLRYATILTNSVItkIGLAALARAVTLMTPL--PFLLRRLPYCRS-HVIAHCYCEHMAVVKL 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 191 ACSDTRINQlVFLGAVVLFVA--PCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPDSF 268
Cdd:cd15948 165 ACGDTRFNN-IYGIAVALFIVglDLMFIILSYVFILRAVLSLASKEEQLKAFGTCGSHICAILVFYTPVVLSSTMHRFAR 243
                       250       260       270
                ....*....|....*....|....*....|....
gi 47576087 269 STQDTVATIM---YTVVTPMLNPFIYSLRNKDMK 299
Cdd:cd15948 244 HVAPHVHILLanfYLLFPPMMNPIVYGVKTKQIR 277
7tmA_OR52W-like cd15956
olfactory receptor subfamily 52W and related proteins, member of the class A family of ...
33-296 1.00e-46

olfactory receptor subfamily 52W and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52W and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320622 [Multi-domain]  Cd Length: 275  Bit Score: 158.49  E-value: 1.00e-46
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  33 FLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANV 112
Cdd:cd15956   7 FCFIYVLSLLGNGVLLSVVWKEHRLHQPMFLFLAMLAATDLVLALSTAPKLLAILWFGATAISSYVCLSQMFLVHAFSAM 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 113 DTFLLAAMALDRFVAICYPLQYHTIITPQlCVGLAAVVWICSGL-ISLVHTLLMNRLTFCSSiPEISHFYCDAYLLMKLA 191
Cdd:cd15956  87 ESGVLVAMALDRFVAICNPLHYATILTLE-VVAKAGLLLALRGVaIVIPFPLLVCRLSFCAS-HTIAHTYCEHMAVVKLA 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 192 CSDTRINQLVFLG-AVVLFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPDSFST 270
Cdd:cd15956 165 CGATTVDSLYGLAlALFIGGGDVLFIAYSYGLIVKTVLRLPSPEARGKAFSTCSAHICVILFFYIPGLLSVLMHRFGHSV 244
                       250       260
                ....*....|....*....|....*....
gi 47576087 271 QDTVATIM---YTVVTPMLNPFIYSLRNK 296
Cdd:cd15956 245 PSAAHVLLsnlYLLLPPALNPIVYGIRTK 273
7tmA_OR52A-like cd15955
olfactory receptor subfamily 52A and related proteins, member of the class A family of ...
33-298 1.08e-44

olfactory receptor subfamily 52A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52A and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320621 [Multi-domain]  Cd Length: 276  Bit Score: 153.39  E-value: 1.08e-44
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  33 FLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANV 112
Cdd:cd15955   7 FCIMFLLAVLGNCTLLIVIKRERSLHQPMYIFLAMLAATDLGLCPCILPKMLAIFWFQLREISFNACLAQMFFIHTLQAF 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 113 DTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWI-CSGLISLVHTLLMNRLTFCSSIpEISHFYCDAYLLMKLA 191
Cdd:cd15955  87 ESGILLAMALDRYVAICHPLRHSSILTPQVLLGIGVLVVVrAVVLIIPCPLLIKLRLHHFRST-VISHSYCEHMAVVKLA 165
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 192 CSDTRINQLVFLgAVVLFVAPC--ILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFY--------GTVLGIY 261
Cdd:cd15955 166 ADDVRVNKIYGL-FVAFSILGFdiIFITTSYALIFRAVFRLPQKEARLKAFNTCTAHIFVFLLFYtlaffsffAHRFGHH 244
                       250       260       270
                ....*....|....*....|....*....|....*..
gi 47576087 262 IRPpdsfSTQDTVATImYTVVTPMLNPFIYSLRNKDM 298
Cdd:cd15955 245 VAP----YVHILLSNL-YLLVPPVLNPIVYGVKTKQI 276
7tmA_OR52M-like cd15949
olfactory receptor subfamily 52M and related proteins, member of the class A family of ...
12-299 1.11e-44

olfactory receptor subfamily 52M and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52M and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320615  Cd Length: 292  Bit Score: 153.78  E-value: 1.11e-44
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  12 SGFLLLGItndPQQQQILFW---AFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHV 88
Cdd:cd15949   2 STFILLGI---PGLEPLHVWisiPFCSMYLIAVLGNCTILFIIKSEPSLHQPMYFFLSMLAIIDLVLSTSTMPKLLAIFW 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  89 SGTEIISYAHCLTQMYFLISFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRL 168
Cdd:cd15949  79 FSSNEIPLHACLLQMFLIHSFSAIESGIFLAMAFDRYVAICNPLRHKTILTNTTVIRIGLAAVIRGVLYISPLPLLVRRL 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 169 TFCSSiPEISHFYCDAYLLMKLACSDTRINQL--VFLGAVVLFVaPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSH 246
Cdd:cd15949 159 PWYRT-NIIAHSYCEHMAVVGLACGDVSINNHygLTIGFLVLIM-DSLFIVLSYIMILRVVQRLATSEARLKTFGTCVSH 236
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 47576087 247 LTVVILFYGTVL--------GIYIRPPdsfstQDTVATIMYTVVTPMLNPFIYSLRNKDMK 299
Cdd:cd15949 237 VCAILAFYVPIAvsslihrfGQNVPPP-----THILLANFYLLIPPMLNPIVYGVRTKQIQ 292
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
43-291 3.55e-42

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 146.29  E-value: 3.55e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087    43 GNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVS-GTEIISYAHCLTQMYFLISFANVDTFLLAAMA 121
Cdd:pfam00001   1 GNLLVILVILRNKKLRTPTNIFLLNLAVADLLFSLLTLPFWLVYYLNhGDWPFGSALCKIVGALFVVNGYASILLLTAIS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087   122 LDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTfcssIPEISHFYCDAYLLMKLACSDTrinqLV 201
Cdd:pfam00001  81 IDRYLAIVHPLRYKRRRTPRRAKVLILVIWVLALLLSLPPLLFGWTLT----VPEGNVTVCFIDFPEDLSKPVS----YT 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087   202 FLGAVVLFVAPCILIVFSYVRIAMAVFQIPSAKGR-------HKAFSTCSSHLTVVILFYG-----TVLGIYIRPPDSFS 269
Cdd:pfam00001 153 LLISVLGFLLPLLVILVCYTLIIRTLRKSASKQKSsertqrrRKALKTLAVVVVVFILCWLpyhivNLLDSLALDCELSR 232
                         250       260
                  ....*....|....*....|....
gi 47576087   270 TQDTV--ATIMYTVVTPMLNPFIY 291
Cdd:pfam00001 233 LLDKAlsVTLWLAYVNSCLNPIIY 256
7tmA_OR52N-like cd15954
olfactory receptor subfamily 52N and related proteins, member of the class A family of ...
33-298 2.88e-41

olfactory receptor subfamily 52N and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52N and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320620  Cd Length: 276  Bit Score: 144.58  E-value: 2.88e-41
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  33 FLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANV 112
Cdd:cd15954   7 FCFMYIIAMVGNCGLLYLIWIEEALHRPMYYFLSMLSFTDITLCTTMVPKAMCIFWFNLKEISFNACLVQMFFVHTFTGM 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 113 DTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSiPEISHFYCDAYLLMKLAC 192
Cdd:cd15954  87 ESGVLMLMALDRYVAICYPLRYATILTNPVITKAGLATFLRGVMLIIPFPLLTKRLPYCRG-NFIPHTYCDHMSVVKLAC 165
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 193 SDTRINQLVFLGAVVLFVAPCIL-IVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVL-GIYIRPPDSFST 270
Cdd:cd15954 166 ANIRVDAIYGLMVALLIGGFDILcISVSYAMILRAVVSLSSKEARSKAFSTCTAHICAIVITYTPAFfTFFAHRFGGHHI 245
                       250       260       270
                ....*....|....*....|....*....|.
gi 47576087 271 QDTVATIM---YTVVTPMLNPFIYSLRNKDM 298
Cdd:cd15954 246 TPHIHIIManlYLLLPPMMNPIVYGVKTKQI 276
7tm_classA_rhodopsin-like cd00637
rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor ...
32-295 2.37e-28

rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor superfamily; Class A rhodopsin-like receptors constitute about 90% of all GPCRs. The class A GPCRs include the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. Based on sequence similarity, GPCRs can be divided into six major classes: class A (rhodopsin-like family), class B (Methuselah-like, adhesion and secretin-like receptor family), class C (metabotropic glutamate receptor family), class D (fungal mating pheromone receptors), class E (cAMP receptor family), and class F (frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


Pssm-ID: 410626 [Multi-domain]  Cd Length: 275  Bit Score: 110.46  E-value: 2.37e-28
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  32 AFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFAN 111
Cdd:cd00637   4 LYILIFVVGLVGNLLVILVILRNRRLRTVTNYFILNLAVADLLVGLLVIPFSLVSLLLGRWWFGDALCKLLGFLQSVSLL 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 112 VDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRltfcssipeisHFYCDAYLLMKLA 191
Cdd:cd00637  84 ASILTLTAISVDRYLAIVHPLRYRRRFTRRRAKLLIALIWLLSLLLALPPLLGWGV-----------YDYGGYCCCCLCW 152
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 192 CSDTRINQLVFLGAVVLFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSH-----------LTVVILFY------ 254
Cdd:cd00637 153 PDLTLSKAYTIFLFVLLFLLPLLVIIVCYVRIFRKLRRHRRRIRSSSSNSSRRRRrrrerkvtktlLIVVVVFLlcwlpy 232
                       250       260       270       280
                ....*....|....*....|....*....|....*....|...
gi 47576087 255 --GTVLGIYIRPPDSFSTQDTVATIMYTVVTPMLNPFIYSLRN 295
Cdd:cd00637 233 fiLLLLDVFGPDPSPLPRILYFLALLLAYLNSAINPIIYAFFN 275
7tmA_amine_R-like cd14967
amine receptors and similar proteins, member of the class A family of seven-transmembrane G ...
38-301 3.60e-25

amine receptors and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; Amine receptors of the class A family of GPCRs include adrenoceptors, 5-HT (serotonin) receptors, muscarinic cholinergic receptors, dopamine receptors, histamine receptors, and trace amine receptors. The receptors of amine subfamily are major therapeutic targets for the treatment of neurological disorders and psychiatric diseases. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320098 [Multi-domain]  Cd Length: 259  Bit Score: 101.49  E-value: 3.60e-25
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  38 LVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANVDTFLL 117
Cdd:cd14967  11 LVTVFGNLLVILAVYRNRRLRTVTNYFIVSLAVADLLVALLVMPFSAVYTLLGYWPFGPVLCRFWIALDVLCCTASILNL 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 118 AAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSIPEIshfycdayllmklaCSDTRI 197
Cdd:cd14967  91 CAISLDRYLAITRPLRYRQLMTKKRALIMIAAVWVYSLLISLPPLVGWRDETQPSVVDCE--------------CEFTPN 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 198 NQLVFLGAVVLFVAPCILIVFSYVRIamavFQIpsAKGRHKAFSTcsshLTVVIL--------FYGTVLGIYIRPPDSFS 269
Cdd:cd14967 157 KIYVLVSSVISFFIPLLIMIVLYARI----FRV--ARRELKAAKT----LAIIVGafllcwlpFFIIYLVSAFCPPDCVP 226
                       250       260       270
                ....*....|....*....|....*....|..
gi 47576087 270 TQDTVATIMYTVVTPMLNPFIYSLRNKDMKQT 301
Cdd:cd14967 227 PILYAVFFWLGYLNSALNPIIYALFNRDFRRA 258
7tmA_Dop1R2-like cd15067
dopamine 1-like receptor 2 from Drosophila melanogaster and similar proteins, member of the ...
38-299 1.03e-16

dopamine 1-like receptor 2 from Drosophila melanogaster and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; G protein-coupled dopamine 1-like receptor 2 is expressed in Drosophila heads and it shows significant sequence similarity with vertebrate and invertebrate dopamine receptors. Although the Drosophila Dop1R2 receptor does not cluster into the D1-like structural group, it does show pharmacological properties similar to D1-like receptors. As shown in vertebrate D1-like receptors, agonist stimulation of Dop1R2 activates adenylyl cyclase to increase cAMP levels and also generates a calcium signal through stimulation of phospholipase C.


Pssm-ID: 320195 [Multi-domain]  Cd Length: 262  Bit Score: 78.17  E-value: 1.03e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  38 LVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSG-TEIISYAHCLTQMYFLISFANVDTFL 116
Cdd:cd15067  11 LVTVAGNLLVILAVLRERYLRTVTNYFIVSLAVADLLVGSIVMPFSILHEMTGgYWLFGRDWCDVWHSFDVLASTASILN 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 117 LAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSIPEISHFYCD-AYLlmklacsdt 195
Cdd:cd15067  91 LCVISLDRYWAITDPISYPSRMTKRRALIMIALVWICSALISFPAIAWWRAVDPGPSPPNQCLFTDDsGYL--------- 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 196 rinqlvFLGAVVLFVAPCILIVFSYVRIAMAvfqipsAKGRHKAFSTCSSHLTVVIL----FYGTVLGIYIRPPDSFSTQ 271
Cdd:cd15067 162 ------IFSSCVSFYIPLVVMLFTYYRIYRA------AAKEQKAAKTLGIVMGVFILcwlpFFVTNILIGFCPSNCVSNP 229
                       250       260       270
                ....*....|....*....|....*....|
gi 47576087 272 DTVATIMYTV--VTPMLNPFIYSLRNKDMK 299
Cdd:cd15067 230 DILFPLVTWLgyINSGMNPIIYACSSRDFR 259
7tmA_EDG-like cd14972
endothelial differentiation gene family, member of the class A family of seven-transmembrane G ...
32-302 4.79e-15

endothelial differentiation gene family, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents the endothelial differentiation gene (Edg) family of G-protein coupled receptors, melanocortin/ACTH receptors, and cannabinoid receptors as well as their closely related receptors. The Edg GPCRs bind blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). Melanocortin receptors bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. Two types of cannabinoid receptors, CB1 and CB2, are activated by naturally occurring endocannabinoids, cannabis plant-derived cannabinoids such as tetrahydrocannabinol, or synthetic cannabinoids. The CB receptors are involved in the various physiological processes such as appetite, mood, memory, and pain sensation. CB1 receptor is expressed predominantly in central and peripheral neurons, while CB2 receptor is found mainly in the immune system.


Pssm-ID: 341317 [Multi-domain]  Cd Length: 275  Bit Score: 73.87  E-value: 4.79e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  32 AFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFAN 111
Cdd:cd14972   4 VAIVLGVFIVVENSLVLAAIIKNRRLHKPMYILIANLAAADLLAGIAFVFTFLSVLLVSLTPSPATWLLRKGSLVLSLLA 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 112 VDTFLLaAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMN-RLTFCSSIPEISHFYCDAYLLMkl 190
Cdd:cd14972  84 SAYSLL-AIAVDRYISIVHGLTYVNNVTNKRVKVLIALVWVWSVLLALLPVLGWNcVLCDQESCSPLGPGLPKSYLVL-- 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 191 acsdtrinqlvflgAVVLFVAPCILIVFSYVRI---------AMAVFQIpSAKGRHKAFSTcSSHLTVVIlfygtVLGIY 261
Cdd:cd14972 161 --------------ILVFFFIALVIIVFLYVRIfwclwrhanAIAARQE-AAVPAQPSTSR-KLAKTVVI-----VLGVF 219
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 47576087 262 I---------------RPPDSFSTQDTVATIMYTVVTPMLNPFIYSLRNKDMKQTV 302
Cdd:cd14972 220 LvcwlpllillvldvlCPSVCDIQAVFYYFLVLALLNSAINPIIYAFRLKEMRRAV 275
7tmA_CCKR-like cd14993
cholecystokinin receptors and related proteins, member of the class A family of ...
31-224 2.48e-14

cholecystokinin receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents four G-protein coupled receptors that are members of the RFamide receptor family, including cholecystokinin receptors (CCK-AR and CCK-BR), orexin receptors (OXR), neuropeptide FF receptors (NPFFR), and pyroglutamylated RFamide peptide receptor (QRFPR). These RFamide receptors are activated by their endogenous peptide ligands that share a common C-terminal arginine (R) and an amidated phenylanine (F) motif. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors. Orexins (OXs; also referred to as hypocretins) are neuropeptide hormones that regulate the sleep-wake cycle and potently influence homeostatic systems regulating appetite and feeding behavior or modulating emotional responses such as anxiety or panic. OXs are synthesized as prepro-orexin (PPO) in the hypothalamus and then proteolytically cleaved into two forms of isoforms: orexin-A (OX-A) and orexin-B (OX-B). OXA is a 33 amino-acid peptide with N-terminal pyroglutamyl residue and two intramolecular disulfide bonds, whereas OXB is a 28 amino-acid linear peptide with no disulfide bonds. OX-A binds orexin receptor 1 (OX1R) with high-affinity, but also binds with somewhat low-affinity to OX2R, and signals primarily to Gq coupling, whereas OX-B shows a strong preference for the orexin receptor 2 (OX2R) and signals through Gq or Gi/o coupling. The 26RFa, also known as QRFP (Pyroglutamylated RFamide peptide), is a 26-amino acid residue peptide that exerts similar orexigenic activity including the regulation of feeding behavior in mammals. It is the ligand for G-protein coupled receptor 103 (GPR103), which is predominantly expressed in paraventricular (PVN) and ventromedial (VMH) nuclei of the hypothalamus. GPR103 shares significant protein sequence homology with orexin receptors (OX1R and OX2R), which have recently shown to produce a neuroprotective effect in Alzheimer's disease by forming a functional heterodimer with GPR103. Neuropeptide FF (NPFF) is a mammalian octapeptide that has been implicated in a wide range of physiological functions in the brain including pain sensitivity, insulin release, food intake, memory, blood pressure, and opioid-induced tolerance and hyperalgesia. The effects of NPFF are mediated through neuropeptide FF1 and FF2 receptors (NPFF1-R and NPFF2-R) which are predominantly expressed in the brain. NPFF induces pro-nociceptive effects, mainly through the NPFF1-R, and anti-nociceptive effects, mainly through the NPFF2-R.


Pssm-ID: 320124 [Multi-domain]  Cd Length: 296  Bit Score: 71.86  E-value: 2.48e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  31 WAFLCMY----LVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFL 106
Cdd:cd14993   1 IVLIVLYvvvfLLALVGNSLVIAVVLRNKHMRTVTNYFLVNLAVADLLVSLFCMPLTLLENVYRPWVFGEVLCKAVPYLQ 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 107 ISFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVhTLLMNRLTF--CSSIPEISHFYCDa 184
Cdd:cd14993  81 GVSVSASVLTLVAISIDRYLAICYPLKARRVSTKRRARIIIVAIWVIAIIIMLP-LLVVYELEEiiSSEPGTITIYICT- 158
                       170       180       190       200
                ....*....|....*....|....*....|....*....|
gi 47576087 185 ylLMKLACSDTRINQLVFLgaVVLFVAPCILIVFSYVRIA 224
Cdd:cd14993 159 --EDWPSPELRKAYNVALF--VVLYVLPLLIISVAYSLIG 194
7tmA_Ap5-HTB1-like cd15065
serotonin receptor subtypes B1 and B2 from Aplysia californica and similar proteins; member of ...
38-223 1.74e-13

serotonin receptor subtypes B1 and B2 from Aplysia californica and similar proteins; member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes Aplysia californica serotonin receptors Ap5-HTB1 and Ap5-HTB2, and similar proteins from bilateria including insects, mollusks, annelids, and worms. Ap5-HTB1 is one of the several different receptors for 5-hydroxytryptamine (5HT, serotonin). In Aplysia, serotonin plays important roles in a variety of behavioral and physiological processes mediated by the central nervous system. These include circadian clock, feeding, locomotor movement, cognition and memory, synaptic growth and synaptic plasticity. Both Ap5-HTB1 and Ap5-HTB2 receptors are coupled to G-proteins that stimulate phospholipase C, leading to the activation of phosphoinositide metabolism. Ap5-HTB1 is expressed in the reproductive system, whereas Ap5-HTB2 is expressed in the central nervous system.


Pssm-ID: 320193 [Multi-domain]  Cd Length: 300  Bit Score: 69.69  E-value: 1.74e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  38 LVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANVDTFLL 117
Cdd:cd15065  11 VLAIFGNVLVCLAIFTDRRLRKKSNLFIVSLAVADLLVALLVMTFAVVNDLLGYWLFGETFCNIWISFDVMCSTASILNL 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 118 AAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLV------HTLLMNrLTFCSSIPEISHFYCdaYLLMKLA 191
Cdd:cd15065  91 CAISLDRYIHIKKPLKYERWMTTRRALVVIASVWILSALISFLpihlgwHRLSQD-EIKGLNHASNPKPSC--ALDLNPT 167
                       170       180       190
                ....*....|....*....|....*....|..
gi 47576087 192 CSdtrinqlvFLGAVVLFVAPCILIVFSYVRI 223
Cdd:cd15065 168 YA--------VVSSLISFYIPCLVMLLIYSRL 191
7tmA_TAARs cd15055
trace amine-associated receptors, member of the class A family of seven-transmembrane G ...
28-293 3.66e-13

trace amine-associated receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The trace amine-associated receptors (TAARs) are a distinct subfamily within the class A G protein-coupled receptor family. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320183 [Multi-domain]  Cd Length: 285  Bit Score: 68.35  E-value: 3.66e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPrllashVSGTEIISYA------HCLT 101
Cdd:cd15055   2 LLYIVLSSISLLTVLGNLLVIISISHFKQLHTPTNLLLLSLAVADFLVGLLVMP------FSMIRSIETCwyfgdtFCKL 75
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 102 QMYFLISFANVDTFLLAAMALDRFVAICYPLQYHTIITP---QLCVGLAavvWICSGLISLVhtLLMNRLTFcSSIPEIS 178
Cdd:cd15055  76 HSSLDYILTSASIFNLVLIAIDRYVAVCDPLLYPTKITIrrvKICICLC---WFVSALYSSV--LLYDNLNQ-PGLIRYN 149
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 179 HFYCDAYLLMklacsdTRINQLVFLgaVVLFVAPCILIVFSYVRI-AMAVFQ------------------IPSAKGRHKA 239
Cdd:cd15055 150 SCYGECVVVV------NFIWGVVDL--VLTFILPCTVMIVLYMRIfVVARSQarairshtaqvslegsskKVSKKSERKA 221
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 47576087 240 FSTcsshLTVVIL---------FYGTVLGIYIRPPDSFStqDTVATIMYTVVTpmLNPFIYSL 293
Cdd:cd15055 222 AKT----LGIVVGvfllcwlpyYIVSLVDPYISTPSSVF--DVLIWLGYFNSC--LNPLIYAL 276
7tmA_alpha2B_AR cd15321
alpha-2 adrenergic receptors subtype B, member of the class A family of seven-transmembrane G ...
23-300 7.05e-13

alpha-2 adrenergic receptors subtype B, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-2 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that have a key role in neurotransmitter release: alpha-2A, alpha-2B, and alpha-2C. In addition, a fourth subtype, alpha-2D is present in ray-finned fishes and amphibians, but is not found in humans. The alpha-2 receptors are found in both central and peripheral nervous system and serve to produce inhibitory functions through the G(i) proteins. Thus, the alpha-2 receptors inhibit adenylate cyclase, which decreases cAMP production and thereby decreases calcium influx during the action potential. Consequently, lowered levels of calcium will lead to a decrease in neurotransmitter release by negative feedback.


Pssm-ID: 320444 [Multi-domain]  Cd Length: 268  Bit Score: 67.64  E-value: 7.05e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  23 PQQQQILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQ 102
Cdd:cd15321   3 VQATAAIAAAITFLILFTIFGNVLVIIAVLTSRSLRAPQNLFLVSLAAADILVATLIIPFSLANELMGYWYFRKTWCEIY 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 103 MYFLISFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCS-SIPEISHFY 181
Cdd:cd15321  83 LALDVLFCTSSIVHLCAISLDRYWSVSRAIEYNSKRTPRRIKCIILIVWLIAAVISLPPLIYKGKQKDEQgGLPQCKLNE 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 182 CDAYLLMKLACSdtrinqlvflgavvlFVAPCILIVFSYVRIamavFQIpsAKGRHKAFSTCsshLTVVI---------L 252
Cdd:cd15321 163 EAWYILSSSIGS---------------FFAPCLIMILVYLRI----YLI--AKNREKRFTFV---LAVVIgvfvlcwfpF 218
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|
gi 47576087 253 FYGTVLGIYIrpPDSFSTQDTVATIMYTV--VTPMLNPFIYSLRNKDMKQ 300
Cdd:cd15321 219 FFSYSLGAIC--PELCKVPHSLFQFFFWIgyCNSSLNPVIYTIFNQDFRR 266
7tmA_FMRFamide_R-like cd14978
FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of ...
32-227 1.76e-12

FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes Drosophila melanogaster G-protein coupled FMRFamide (Phe-Met-Arg-Phe-NH2) receptor DrmFMRFa-R and related invertebrate receptors, as well as the vertebrate proteins GPR139 and GPR142. DrmFMRFa-R binds with high affinity to FMRFamide and intrinsic FMRFamide-related peptides. FMRFamide is a neuropeptide from the family of FMRFamide-related peptides (FaRPs), which all containing a C-terminal RFamide (Arg-Phe-NH2) motif and have diverse functions in the central and peripheral nervous systems. FMRFamide is an important neuropeptide in many types of invertebrates such as insects, nematodes, molluscs, and worms. In invertebrates, the FMRFamide-related peptides are involved in the regulation of heart rate, blood pressure, gut motility, feeding behavior, and reproduction. On the other hand, in vertebrates such as mice, they play a role in the modulation of morphine-induced antinociception. Orphan receptors GPR139 and GPR142 are very closely related G protein-coupled receptors, but they have different expression patterns in the brain and in other tissues. These receptors couple to inhibitory G proteins and activate phospholipase C. Studies suggested that dimer formation may be required for their proper function. GPR142 is predominantly expressed in pancreatic beta-cells and mediates enhancement of glucose-stimulated insulin secretion, whereas GPR139 is mostly expressed in the brain and is suggested to play a role in the control of locomotor activity. Tryptophan and phenylalanine have been identified as putative endogenous ligands of GPR139.


Pssm-ID: 410630 [Multi-domain]  Cd Length: 299  Bit Score: 66.50  E-value: 1.76e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  32 AFLCMYLVTVAGNTLIFLAISSdPRLHTPMYFFLANLSFVDVCFTTNLIP----RLLASHVSGTEIISYAHCLTQMYFLI 107
Cdd:cd14978   6 VLPVICIFGIIGNILNLVVLTR-KSMRSSTNVYLAALAVSDILVLLSALPlfllPYIADYSSSFLSYFYAYFLPYIYPLA 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 108 SFAN-VDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLvHTLLMNRLTFCSSIPEISHFYCDAYL 186
Cdd:cd14978  85 NTFQtASVWLTVALTVERYIAVCHPLKARTWCTPRRARRVILIIIIFSLLLNL-PRFFEYEVVECENCNNNSYYYVIPTL 163
                       170       180       190       200
                ....*....|....*....|....*....|....*....|.
gi 47576087 187 LMKLACSDTRINqlVFLGAVVLFVAPCILIVFSYVRIAMAV 227
Cdd:cd14978 164 LRQNETYLLKYY--FWLYAIFVVLLPFILLLILNILLIRAL 202
7tmA_Beta_AR cd15058
beta adrenergic receptors (adrenoceptors), member of the class A family of seven-transmembrane ...
38-230 1.90e-12

beta adrenergic receptors (adrenoceptors), member of the class A family of seven-transmembrane G protein-coupled receptors; The beta adrenergic receptor (beta adrenoceptor), also known as beta AR, is activated by hormone adrenaline (epinephrine) and plays important roles in regulating cardiac function and heart rate, as well as pulmonary physiology. The human heart contains three subtypes of the beta AR: beta-1 AR, beta-2 AR, and beta-3 AR. Beta-1 AR and beta-2 AR, which expressed at about a ratio of 70:30, are the major subtypes involved in modulating cardiac contractility and heart rate by positively stimulating the G(s) protein-adenylate cyclase-cAMP-PKA signaling pathway. In contrast, beta-3 AR produces negative inotropic effects by activating inhibitory G(i) proteins. The aberrant expression of beta-ARs can lead to cardiac dysfunction such as arrhythmias or heart failure. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320186 [Multi-domain]  Cd Length: 305  Bit Score: 66.71  E-value: 1.90e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  38 LVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHC--LTQMYFLISFANVDTf 115
Cdd:cd15058  12 LAIVVGNLLVIIAIARTSRLQTMTNIFITSLACADLVMGLLVVPLGATIVVTGKWQLGNFWCelWTSVDVLCVTASIET- 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 116 lLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHtlLMNRLtFCSSIPEISHFYCDAyllmklACSDT 195
Cdd:cd15058  91 -LCVIAVDRYIAITRPLRYQVLLTKRRARVIVCVVWIVSALVSFVP--IMNQW-WRANDPEANDCYQDP------TCCDF 160
                       170       180       190
                ....*....|....*....|....*....|....*.
gi 47576087 196 RINQ-LVFLGAVVLFVAPCILIVFSYVRiamaVFQI 230
Cdd:cd15058 161 RTNMaYAIASSVVSFYIPLLIMIFVYAR----VFLI 192
7tmA_Adenosine_R cd14968
adenosine receptor subfamily, member of the class A family of seven-transmembrane G ...
38-301 4.12e-12

adenosine receptor subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; The adenosine receptors (or P1 receptors), a family of G protein-coupled purinergic receptors, bind adenosine as their endogenous ligand. There are four types of adenosine receptors in human, designated as A1, A2A, A2B, and A3. Each type is encoded by a different gene and has distinct functions with some overlap. For example, both A1 and A2A receptors are involved in regulating myocardial oxygen consumption and coronary blood flow in the heart, while the A2A receptor also has a broad spectrum of anti-inflammatory effects in the body. These two receptors also expressed in the brain, where they have important roles in the release of other neurotransmitters such as dopamine and glutamate, while the A2B and A3 receptors found primarily in the periphery and play important roles in inflammation and immune responses. The A1 and A3 receptors preferentially interact with G proteins of the G(i/o) family, thereby lowering the intracellular cAMP levels, whereas the A2A and A2B receptors interact with G proteins of the G(s) family, activating adenylate cyclase to elevate cAMP levels.


Pssm-ID: 341316 [Multi-domain]  Cd Length: 285  Bit Score: 65.35  E-value: 4.12e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  38 LVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPrlLASHVSGTEIISYAHCLTQMYFLISFANVDTFLL 117
Cdd:cd14968  12 VLSVLGNVLVIWAVKLNRALRTVTNYFIVSLAVADILVGALAIP--LAILISLGLPTNFHGCLFMACLVLVLTQSSIFSL 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 118 AAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSIPEISHFYCdayllmkLACSDTRI 197
Cdd:cd14968  90 LAIAIDRYLAIKIPLRYKSLVTGRRAWGAIAVCWVLSFLVGLTPMFGWNNGAPLESGCGEGGIQC-------LFEEVIPM 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 198 NQLVFLGAVVLFVAPCILIVFSYVRIAMAVF----QIPSAKG-------RHKAFSTCSSHLTVVILFYGTVLGIYI---- 262
Cdd:cd14968 163 DYMVYFNFFACVLVPLLIMLVIYLRIFRVIRkqlrQIESLLRsrrsrstLQKEVKAAKSLAIILFLFALCWLPLHIinci 242
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*.
gi 47576087 263 -------RPPDSFstqdTVATIMYTVVTPMLNPFIYSLRNKDMKQT 301
Cdd:cd14968 243 tlfcpecKVPKIL----TYIAILLSHANSAVNPIVYAYRIRKFRQT 284
7tmA_TACR-like cd15202
tachykinin receptors and related receptors, member of the class A family of ...
28-299 5.55e-12

tachykinin receptors and related receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the neurokinin/tachykinin receptors and its closely related receptors such as orphan GPR83 and leucokinin-like peptide receptor. The tachykinins are widely distributed throughout the mammalian central and peripheral nervous systems and act as excitatory transmitters on neurons and cells in the gastrointestinal tract. The TKs are characterized by a common five-amino acid C-terminal sequence, Phe-X-Gly-Leu-Met-NH2, where X is a hydrophobic residue. The three major mammalian tachykinins are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB). The physiological actions of tachykinins are mediated through three types of receptors: neurokinin receptor type 1 (NK1R), NK2R, and NK3R. SP is a high-affinity endogenous ligand for NK1R, which interacts with the Gq protein and activates phospholipase C, leading to elevation of intracellular calcium. NK2R is a high-affinity receptor for NKA, the tachykinin neuropeptide substance K. SP and NKA are found in the enteric nervous system and mediate in the regulation of gastrointestinal motility, secretion, vascular permeability, and pain perception. NK3R is activated by its high-affinity ligand, NKB, which is primarily involved in the central nervous system and plays a critical role in the regulation of gonadotropin hormone release and the onset of puberty.


Pssm-ID: 320330 [Multi-domain]  Cd Length: 288  Bit Score: 65.22  E-value: 5.55e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLI 107
Cdd:cd15202   2 LLIVAYSFIIVFSLFGNVLVCWIIFKNQRMRTVTNYFIVNLAVADIMITLFNTPFTFVRAVNNTWIFGLFMCHFSNFAQY 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 108 SFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVglAAVVWICSGLISLVHTLLMNRLTFcssipeISHFYCDAYLL 187
Cdd:cd15202  82 CSVHVSAYTLTAIAVDRYQAIMHPLKPRISKTKAKFI--IAVIWTLALAFALPHAICSKLETF------KYSEDIVRSLC 153
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 188 MKLACSDTRINQLVFLGAVV--LFVAPCILIVFSYVRIAMAVF--QIPSAKGRHKAFSTCSSH-------LTVVILF--- 253
Cdd:cd15202 154 LEDWPERADLFWKYYDLALFilQYFLPLLVISFAYARVGIKLWasNMPGDATTERYFALRRKKkkvikmlMVVVVLFalc 233
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|..
gi 47576087 254 ----YGTVLGIYIRPPDSFSTQDTV--ATIMYTVVTPMLNPFIYSLRNKDMK 299
Cdd:cd15202 234 wlpfNIYVLLLSSKPDYLIKTINAVyfAFHWLAMSSTCYNPFIYCWLNERFR 285
7tmA_alpha2C_AR cd15323
alpha-2 adrenergic receptors subtype C, member of the class A family of seven-transmembrane G ...
36-301 1.01e-11

alpha-2 adrenergic receptors subtype C, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-2 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that have a key role in neurotransmitter release: alpha-2A, alpha-2B, and alpha-2C. In addition, a fourth subtype, alpha-2D is present in ray-finned fishes and amphibians, but is not found in humans. The alpha-2 receptors are found in both central and peripheral nervous system and serve to produce inhibitory functions through the G(i) proteins. Thus, the alpha-2 receptors inhibit adenylate cyclase, which decreases cAMP production and thereby decreases calcium influx during the action potential. Consequently, lowered levels of calcium will lead to a decrease in neurotransmitter release by negative feedback.


Pssm-ID: 320446 [Multi-domain]  Cd Length: 261  Bit Score: 64.19  E-value: 1.01e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  36 MYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANVDTF 115
Cdd:cd15323  10 LIVFTIVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMGYWYFGQVWCNIYLALDVLFCTSSIV 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 116 LLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSIPEishfycdayllmklaCSDT 195
Cdd:cd15323  90 HLCAISLDRYWSVTQAVEYNLKRTPRRVKAIIVTVWLISAVISFPPLISMYRDPEGDVYPQ---------------CKLN 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 196 RINQLVFLGAVVLFVAPCILIVFSYVRIamavFQIpsAKGRHKAFSTCsshLTVVI----------LFYGTVLGIYIRPp 265
Cdd:cd15323 155 DETWYILSSCIGSFFAPCLIMILVYIRI----YRV--AKAREKRFTFV---LAVVMgvfvvcwfpfFFSYSLYGICREA- 224
                       250       260       270
                ....*....|....*....|....*....|....*...
gi 47576087 266 dsFSTQDTVATIMYTV--VTPMLNPFIYSLRNKDMKQT 301
Cdd:cd15323 225 --CEVPEPLFKFFFWIgyCNSSLNPVIYTIFNQDFRRS 260
7tmA_Beta3_AR cd15959
beta-3 adrenergic receptors (adrenoceptors), member of the class A family of ...
36-223 1.31e-11

beta-3 adrenergic receptors (adrenoceptors), member of the class A family of seven-transmembrane G protein-coupled receptors; The beta-3 adrenergic receptor (beta-3 adrenoceptor), also known as beta-3 AR, is activated by adrenaline and plays important roles in regulating cardiac function and heart rate. The human heart contains three subtypes of the beta AR: beta-1 AR, beta-2 AR, and beta-3 AR. Beta-1 AR and beta-2 AR, which expressed at about a ratio of 70:30, are the major subtypes involved in modulating cardiac contractility and heart rate by positively stimulating the G(s) protein-adenylate cyclase-cAMP-PKA signaling pathway. In contrast, beta-3 AR produces negative inotropic effects by activating inhibitory G(i) proteins. The aberrant expression of betrayers can lead to cardiac dysfunction such as arrhythmias or heart failure.


Pssm-ID: 320625 [Multi-domain]  Cd Length: 302  Bit Score: 64.16  E-value: 1.31e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  36 MYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHC--LTQMYFLISFANVD 113
Cdd:cd15959  10 AILVIVGGNLLVIVAIAKTPRLQTMTNVFVTSLACADLVMGLLVVPPGATILLTGHWPLGTTVCelWTSVDVLCVTASIE 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 114 TflLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHtlLMNRLTFCSSIPEISHFYCDAyllmklACS 193
Cdd:cd15959  90 T--LCAIAVDRYLAITNPLRYEALVTKRRARTAVCLVWAISAAISFLP--IMNQWWRDGADEEAQRCYDNP------RCC 159
                       170       180       190
                ....*....|....*....|....*....|.
gi 47576087 194 DTRINQ-LVFLGAVVLFVAPCILIVFSYVRI 223
Cdd:cd15959 160 DFVTNMpYAIVSSTVSFYVPLLVMIFVYVRV 190
7tmA_NPYR-like cd15203
neuropeptide Y receptors and related proteins, member of the class A family of ...
33-223 1.97e-11

neuropeptide Y receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; NPY is a 36-amino acid peptide neurotransmitter with a C-terminal tyrosine amide residue that is widely distributed in the brain and the autonomic nervous system of many mammalian species. NPY exerts its functions through five, G-protein coupled receptor subtypes including NPY1R, NPY2R, NPY4R, NPY5R, and NPY6R; however, NPY6R is not functional in humans. NYP receptors are also activated by its two other family members, peptide YY (PYY) and pancreatic polypeptide (PP). They typically couple to Gi or Go proteins, which leads to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels, and are involved in diverse physiological roles including appetite regulation, circadian rhythm, and anxiety. Also included in this subgroup is prolactin-releasing peptide (PrRP) receptor (previously known as GPR10), which is activated by its endogenous ligand PrRP, a neuropeptide possessing C-terminal Arg-Phe-amide motif. There are two active isoforms of PrRP in mammals: one consists of 20 amino acid residues (PrRP-20) and the other consists of 31 amino acid residues (PrRP-31). PrRP receptor shows significant sequence homology to the NPY receptors, and a micromolar level of NPY can bind and completely inhibit the PrRP-evoked intracellular calcium response in PrRP receptor-expressing cells, suggesting that the PrRP receptor shares a common ancestor with the NPY receptors.


Pssm-ID: 320331 [Multi-domain]  Cd Length: 293  Bit Score: 63.39  E-value: 1.97e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  33 FLCMYLVTVA----GNTLIFLAISSDPRLHTPMYFFLANLSFVD--VCFTTnlIPRLLASHVSGTEIISYAHCltqmyFL 106
Cdd:cd15203   3 LILLYGLIIVlgvvGNLLVIYVVLRNKSMQTVTNIFILNLAVSDllLCLVS--LPFTLIYTLTKNWPFGSILC-----KL 75
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 107 ISFAN-----VDTFLLAAMALDRFVAICYPLQyhTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSIPEISHFY 181
Cdd:cd15203  76 VPSLQgvsifVSTLTLTAIAIDRYQLIVYPTR--PRMSKRHALLIIALIWILSLLLSLPLAIFQELSDVPIEILPYCGYF 153
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....
gi 47576087 182 CDAYllmklacSDTRINQLVFLGAVVL--FVAPCILIVFSYVRI 223
Cdd:cd15203 154 CTES-------WPSSSSRLIYTISVLVlqFVIPLLIISFCYFRI 190
7tmA_5-HT2_insect-like cd15307
serotonin receptor subtype 2 from insects, member of the class A family of seven-transmembrane ...
30-306 3.05e-11

serotonin receptor subtype 2 from insects, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320433 [Multi-domain]  Cd Length: 279  Bit Score: 62.66  E-value: 3.05e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  30 FWAFLCMYLV--TVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLI 107
Cdd:cd15307   2 YWALLALVLVlgTAAGNILVCLAIAWERRLQNVTNYFLMSLAITDLMVAVLVMPLGILTLVKGHFPLSSEHCLTWICLDV 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 108 SFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWIcsglislvhtllmnrLTFCSSIPEISHFYCDAYLL 187
Cdd:cd15307  82 LFCTASIMHLCTISVDRYLSLRYPMRFGRNKTRRRVTLKIVFVWL---------------LSIAMSLPLSLMYSKDHASV 146
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 188 MKLACSDTRINQLVFLGAVVLFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLG-----IYI 262
Cdd:cd15307 147 LVNGTCQIPDPVYKLVGSIVCFYIPLGVMLLTYCLTVRLLARQRSRHGRIIRLEQKATKVLGVVFFTFVILWspffvLNL 226
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|
gi 47576087 263 RPPDSFSTQDTVATIMYTVVT------PMLNPFIYSLRNKDMKQTVTRLF 306
Cdd:cd15307 227 LPTVCAECEERISHWVFDVVTwlgyasSMVNPIFYTIFNKVFRQAFKKVL 276
7tmA_alpha2A_AR cd15322
alpha-2 adrenergic receptors subtype A, member of the class A family of seven-transmembrane G ...
36-301 3.43e-11

alpha-2 adrenergic receptors subtype A, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-2 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that have a key role in neurotransmitter release: alpha-2A, alpha-2B, and alpha-2C. In addition, a fourth subtype, alpha-2D is present in ray-finned fishes and amphibians, but is not found in humans. The alpha-2 receptors are found in both central and peripheral nervous system and serve to produce inhibitory functions through the G(i) proteins. Thus, the alpha-2 receptors inhibit adenylate cyclase, which decreases cAMP production and thereby decreases calcium influx during the action potential. Consequently, lowered levels of calcium will lead to a decrease in neurotransmitter release by negative feedback.


Pssm-ID: 320445 [Multi-domain]  Cd Length: 259  Bit Score: 62.27  E-value: 3.43e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  36 MYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANVDTF 115
Cdd:cd15322  10 LMLLTVFGNVLVIIAVFTSRALKAPQNLFLVSLASADILVATLVIPFSLANEVMGYWYFGKVWCEIYLALDVLFCTSSIV 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 116 LLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSIPeishfycdayllmklACSDT 195
Cdd:cd15322  90 HLCAISLDRYWSITQAIEYNLKRTPRRIKCIIFIVWVISAVISFPPLITIEKKSGQPEGP---------------ICKIN 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 196 RINQLVFLGAVVLFVAPCILIVFSYVRIamavFQIpsAKGRHKAFSTCSSHL--TVVILFYGTVLGIYIRPPDSFSTQDT 273
Cdd:cd15322 155 DEKWYIISSCIGSFFAPCLIMVLVYIRI----YQI--AKNREKRFTFVLAVVigVFVICWFPFFFTYTLTAVCDCSVPET 228
                       250       260       270
                ....*....|....*....|....*....|
gi 47576087 274 VATIM--YTVVTPMLNPFIYSLRNKDMKQT 301
Cdd:cd15322 229 LFKFFfwFGYCNSSLNPVIYTIFNHDFRRA 258
7tmA_Adenosine_R_A2B cd15069
adenosine receptor subtype 2AB, member of the class A family of seven-transmembrane G ...
34-159 6.33e-11

adenosine receptor subtype 2AB, member of the class A family of seven-transmembrane G protein-coupled receptors; The A2B receptor, a member of the adenosine receptor family of G protein-coupled receptors, binds adenosine as its endogenous ligand and is involved in regulating myocardial oxygen consumption and coronary blood flow. High-affinity A2A and low-affinity A2B receptors are preferentially coupled to G proteins of the stimulatory (Gs) family, which lead to activation of adenylate cyclase and thereby increasing the intracellular cAMP levels. The A2A receptor activation protects against tissue injury and acts as anti-inflammatory agent. In human skin endothelial cells, activation of A2B receptor, but not the A2A receptor, promotes angiogenesis. Alternatively, activated A2A receptor, but not the A2B receptor, promotes angiogenesis in human umbilical vein and lung microvascular endothelial cells. The A2A receptor alters cardiac contractility indirectly by modulating the anti-adrenergic effect of A1 receptor, while the A2B receptor exerts direct effects on cardiac contractile function, but does not modulate beta-adrenergic or A1 anti-adrenergic effects.


Pssm-ID: 320197 [Multi-domain]  Cd Length: 294  Bit Score: 61.87  E-value: 6.33e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  34 LCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPrlLASHVSGTEIISYAHCLTQMYFLISFANVD 113
Cdd:cd15069   8 LIIAALSVAGNVLVCAAVGTNSTLQTPTNYFLVSLAAADVAVGLFAIP--FAITISLGFCTDFHSCLFLACFVLVLTQSS 85
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*.
gi 47576087 114 TFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISL 159
Cdd:cd15069  86 IFSLLAVAVDRYLAIKVPLRYKSLVTGKRARGVIAVLWVLAFGIGL 131
7tmA_Opsins_type2_animals cd14969
type 2 opsins in animals, member of the class A family of seven-transmembrane G ...
28-302 8.55e-11

type 2 opsins in animals, member of the class A family of seven-transmembrane G protein-coupled receptors; This rhodopsin family represents the type 2 opsins found in vertebrates and invertebrates except sponge. Type 2 opsins primarily function as G protein coupled receptors and are responsible for vision as well as for circadian rhythm and pigment regulation. On the contrary, type 1 opsins such as bacteriorhodopsin and proteorhodopsin are found in both prokaryotic and eukaryotic microbes, functioning as light-gated ion channels, proton pumps, sensory receptors and in other unknown functions. Although these two opsin types share seven-transmembrane domain topology and a conserved lysine reside in the seventh helix, type 1 opsins do not activate G-proteins and are not evolutionarily related to type 2. Type 2 opsins can be classified into six distinct subfamilies including the vertebrate opsins/encephalopsins, the G(o) opsins, the G(s) opsins, the invertebrate G(q) opsins, the photoisomerases, and the neuropsins.


Pssm-ID: 381741 [Multi-domain]  Cd Length: 284  Bit Score: 61.45  E-value: 8.55e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCMYLVT-VAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFL 106
Cdd:cd14969   1 YVLAVYLSLIGVLgVVLNGLVIIVFLKKKKLRTPLNLFLLNLALADLLMSVVGYPLSFYSNLSGRWSFGDPGCVIYGFAV 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 107 ISFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLaAVVWICSGLISLVHTLLMNRLTfcssiPEISHFYCdaYL 186
Cdd:cd14969  81 TFLGLVSISTLAALAFERYLVIVRPLKAFRLSKRRALILI-AFIWLYGLFWALPPLFGWSSYV-----PEGGGTSC--SV 152
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 187 LMKLACSDTRINQLVFLgaVVLFVAPCILIVFSYVRIAMAV----------FQIPSAKGRHKAFSTCSSHLTVVILFYG- 255
Cdd:cd14969 153 DWYSKDPNSLSYIVSLF--VFCFFLPLAIIIFCYYKIYRTLrkmskraarrKNSAITKRTKKAEKKVAKMVLVMIVAFLi 230
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 47576087 256 -----TVLGIYIrppdSFSTQDTVATIMYTV------VTPMLNPFIYSLRNKDMKQTV 302
Cdd:cd14969 231 awtpyAVVSLYV----SFGGESTIPPLLATIpalfakSSTIYNPIIYVFMNKQFRRAL 284
7tmA_Trissin_R cd15012
trissin receptor and related proteins, member of the class A family of seven-transmembrane G ...
28-300 1.75e-10

trissin receptor and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup represents the Drosophila melanogaster trissin receptor and closely related invertebrate proteins which are a member of the class A family of seven-transmembrane G-protein coupled receptors. The cysteine-rich trissin has been shown to be an endogenous ligand for the orphan CG34381 in Drosophila melanogaster. Trissin is a peptide composed of 28 amino acids with three intrachain disulfide bonds with no significant structural similarities to known endogenous peptides. Cysteine-rich peptides are known to have antimicrobial or toxicant activities, although frequently their mechanism of action is poorly understood. Since the expression of trissin and its receptor is reported to predominantly localize to the brain and thoracicoabdominal ganglion, trissin is predicted to behave as a neuropeptide. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320140 [Multi-domain]  Cd Length: 277  Bit Score: 60.54  E-value: 1.75e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLI 107
Cdd:cd15012   1 IFIILYTLVFCCCFFGNLLVILVVTSHRRMRTITNFFLANLAVADLCVGIFCVLQNLSIYLIPSWPFGEVLCRMYQFVHS 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 108 SFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTfcssIPEISHFYCDAYLL 187
Cdd:cd15012  81 LSYTASIGILVVISVERYIAILHPLRCKQLLTAARLRVTIVTVWLTSAVYNTPYFVFSQTVE----ILVTQDGQEEEICV 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 188 MKLACSDTRINQLVFLgaVVLFVAPCILIVFSYVRIAMAVFQIPSAKGRHK----------AFSTCSshLTVVILFYGTV 257
Cdd:cd15012 157 LDREMFNSKLYDTINF--IVWYLIPLLIMTVLYSKISIVLWKSSSIEARRKvvrllvavvvSFALCN--LPYHARKMWQY 232
                       250       260       270       280
                ....*....|....*....|....*....|....*....|...
gi 47576087 258 LGIYIRPPDSFSTQDTVATIMYTVVTPMLNPFIYSLRNKDMKQ 300
Cdd:cd15012 233 WSEPYRCDSNWNALLTPLTFLVLYFNSAVNPLLYAFLSKRFRQ 275
7tmA_GPRnna14-like cd15001
GPRnna14 and related proteins, member of the class A family of seven-transmembrane G ...
38-223 2.43e-10

GPRnna14 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the orphan G-protein coupled receptor GPRnna14 found in body louse (Pediculus humanus humanus) as well as its closely related proteins of unknown function. These receptors are members of the class A rhodopsin-like G-protein coupled receptors. As an obligatory parasite of humans, the body louse is an important vector for human diseases, including epidemic typhus, relapsing fever, and trench fever. GPRnna14 shares significant sequence similarity with the members of the neurotensin receptor family. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320132 [Multi-domain]  Cd Length: 266  Bit Score: 59.98  E-value: 2.43e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  38 LVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANVDTFLL 117
Cdd:cd15001  11 VLGLIGNSLVIFVVARFRRMRSVTNVFLASLATADLLLLVFCVPLKTAEYFSPTWSLGAFLCKAVAYLQLLSFICSVLTL 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 118 AAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISlVHTLLMNRLTFCSSIPEISHFYCdayllmKLACSDTRI 197
Cdd:cd15001  91 TAISIERYYVILHPMKAKSFCTIGRARKVALLIWILSAILA-SPVLFGQGLVRYESENGVTVYHC------QKAWPSTLY 163
                       170       180
                ....*....|....*....|....*..
gi 47576087 198 NQLVFL-GAVVLFVAPCILIVFSYVRI 223
Cdd:cd15001 164 SRLYVVyLAIVIFFIPLIVMTFAYARD 190
7tmA_GPR83 cd15389
G protein-coupled receptor 83, member of the class A family of seven-transmembrane G ...
28-224 2.94e-10

G protein-coupled receptor 83, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR83, also known as GPR72, is widely expressed in the brain, including hypothalamic nuclei which is involved in regulating energy balance and food intake. The hypothalamic expression of GPR83 is tightly regulated in response to nutrient availability and is decreased in obese mice. A recent study suggests that GPR83 has a critical role in the regulation of systemic energy metabolism via ghrelin-dependent and ghrelin-independent mechanisms. GPR83 shares a significant amino acid sequence identity with the tachykinin receptors, however its endogenous ligand is unknown.


Pssm-ID: 320511 [Multi-domain]  Cd Length: 285  Bit Score: 60.04  E-value: 2.94e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLI 107
Cdd:cd15389   2 LLIVAYSIIIVISLFGNSLVCHVIFKNKRMHTATNLFIVNLAVSDILITLLNTPFTLVRFVNSTWVFGKIMCHLSRFAQY 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 108 SFANVDTFLLAAMALDRFVAICYPLQYHtiITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSIpEISHFYCDAYLl 187
Cdd:cd15389  82 CSVYVSTLTLTAIALDRHRVILHPLKPR--ITPCQGVVVIAIIWIMASCLSLPHAIYQKLVEFEYSN-ERTRSRCLPSF- 157
                       170       180       190
                ....*....|....*....|....*....|....*..
gi 47576087 188 mkLACSDTRINQLVFLGAVVLFVAPCILIVFSYVRIA 224
Cdd:cd15389 158 --PEPSDLFWKYLDLATFILQYVLPLLIIGVAYTRVA 192
7tmA_OXR cd15208
orexin receptors, member of the class A family of seven-transmembrane G protein-coupled ...
28-233 4.90e-10

orexin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Orexins (OXs, also referred to as hypocretins) are neuropeptide hormones that regulate the sleep-wake cycle and potently influence homeostatic systems regulating appetite and feeding behavior or modulating emotional responses such as anxiety or panic. OXs are synthesized as prepro-orexin (PPO) in the hypothalamus and then proteolytically cleaved into two forms of isoforms: orexin-A (OX-A) and orexin-B (OX-B). OXA is a 33 amino-acid peptide with N-terminal pyroglutamyl residue and two intramolecular disulfide bonds, whereas OXB is a 28 amino-acid linear peptide with no disulfide bonds. OX-A binds orexin receptor 1 (OX1R) with high-affinity, but also binds with somewhat low-affinity to OX2R, and signals primarily to Gq coupling, whereas OX-B shows a strong preference for the orexin receptor 2 (OX2R) and signals through Gq or Gi/o coupling. Thus, activation of OX1R or OX2R will activate phospholipase activity and the phosphatidylinositol and calcium signaling pathways. Additionally, OX2R activation can also lead to inhibition of adenylate cyclase.


Pssm-ID: 320336 [Multi-domain]  Cd Length: 303  Bit Score: 59.33  E-value: 4.90e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLI 107
Cdd:cd15208   2 VLIALYILVFIVGLVGNVLVCFAVWRNHHMRTVTNYFIVNLSLADFLVIIICLPATLLVDVTETWFFGQVLCKIIPYLQT 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 108 SFANVDTFLLAAMALDRFVAICYPLQYHTiiTPQLCVGLAAVVWICSGLISLVHTLLMNRltfcssipeISHFYCDAYLL 187
Cdd:cd15208  82 VSVSVSVLTLSCIALDRWYAICHPLMFKS--TAKRARVSILIIWIVSLLIMIPQAIVMEC---------SRVVPLANKTI 150
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|...
gi 47576087 188 MKLACSDT---RINQLVF--LGAVVLFVAPCILIVFSYVRIAMAVF--QIPSA 233
Cdd:cd15208 151 LLTVCDERwsdSIYQKVYhiCFFLVTYLLPLCLMILAYFQIFRKLWcrQIPGT 203
7tmA_SREB-like cd15005
super conserved receptor expressed in brain and related proteins, member of the class A family ...
35-159 1.57e-09

super conserved receptor expressed in brain and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; The SREB (super conserved receptor expressed in brain) subfamily consists of at least three members, named SREB1 (GPR27), SREB2 (GPR85), and SREB3 (GPR173). They are very highly conserved G protein-coupled receptors throughout vertebrate evolution, however no endogenous ligands have yet been identified. SREB2 is greatly expressed in brain regions involved in psychiatric disorders and cognition, such as the hippocampal dentate gyrus. Genetic studies in both humans and mice have shown that SREB2 influences brain size and negatively regulates hippocampal adult neurogenesis and neurogenesis-dependent cognitive function, all of which are suggesting a potential link between SREB2 and schizophrenia. All three SREB genes are highly expressed in differentiated hippocampal neural stem cells. Furthermore, all GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320134 [Multi-domain]  Cd Length: 329  Bit Score: 58.24  E-value: 1.57e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  35 CMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSG-TEIISYAHCLTQMYFLISFANVD 113
Cdd:cd15005   9 LILCVSLAGNLLFSVLIVRDRSLHRAPYYFLLDLCLADGLRSLACFPFVMASVRHGsGWIYGALSCKVIAFLAVLFCFHS 88
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*.
gi 47576087 114 TFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISL 159
Cdd:cd15005  89 AFTLFCIAVTRYMAIAHHRFYAKRMTFWTCLAVICMAWTLSVAMAF 134
7tmA_NTSR-like cd14979
neurotensin receptors and related G protein-coupled receptors, member of the class A family of ...
33-224 1.70e-09

neurotensin receptors and related G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes the neurotensin receptors and related G-protein coupled receptors, including neuromedin U receptors, growth hormone secretagogue receptor, motilin receptor, the putative GPR39 and the capa receptors from insects. These receptors all bind peptide hormones with diverse physiological effects. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320110 [Multi-domain]  Cd Length: 300  Bit Score: 57.75  E-value: 1.70e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  33 FLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTtnliprLLASHVSGTEIISYAHCLTQMYF------- 105
Cdd:cd14979   7 YVAIFVVGIVGNLLTCIVIARHKSLRTTTNYYLFSLAVSDLLIL------LVGLPVELYNFWWQYPWAFGDGGcklyyfl 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 106 --LISFANVDTflLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNR--LTFCSSIPEISHFY 181
Cdd:cd14979  81 feACTYATVLT--IVALSVERYVAICHPLKAKTLVTKRRVKRFILAIWLVSILCAIPILFLMGIqyLNGPLPGPVPDSAV 158
                       170       180       190       200
                ....*....|....*....|....*....|....*....|...
gi 47576087 182 CDayllmkLACSDTRINQLVFLGAVVLFVAPCILIVFSYVRIA 224
Cdd:cd14979 159 CT------LVVDRSTFKYVFQVSTFIFFVLPMFVISILYFRIG 195
7tmA_Melanopsin-like cd15083
vertebrate melanopsins and related opsins, member of the class A family of seven-transmembrane ...
34-227 1.95e-09

vertebrate melanopsins and related opsins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represent the Gq-coupled rhodopsin subfamily consists of melanopsins, insect photoreceptors R1-R6, invertebrate Gq opsins as well as their closely related opsins. Melanopsins (also called Opsin-4) are the primary photoreceptor molecules for non-visual functions such as the photo-entrainment of the circadian rhythm and pupillary constriction in mammals. Mammalian melanopsins are expressed only in the inner retina, whereas non-mammalian vertebrate melanopsins are localized in various extra-retinal tissues such as iris, brain, pineal gland, and skin. The outer photoreceptors (R1-R6) are the insect Drosophila equivalent to the vertebrate rods and are responsible for image formation and motion detection. The invertebrate G(q) opsins includes the arthropod and mollusk visual opsins as well as invertebrate melanopsins, which are also found in vertebrates. Arthropods possess color vision by the use of multiple opsins sensitive to different light wavelengths. Members of this subfamily belong to the class A of the G protein-coupled receptors and have seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320211 [Multi-domain]  Cd Length: 291  Bit Score: 57.34  E-value: 1.95e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  34 LCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCltQMY-FLISFANV 112
Cdd:cd15083   8 LIIGLIGVVGNGLVIYAFCRFKSLRTPANYLIINLAISDFLMCILNCPLMVISSFSGRWIFGKTGC--DMYgFSGGLFGI 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 113 DTFL-LAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLtfcssIPEISHFYCDAYLLMKLA 191
Cdd:cd15083  86 MSINtLAAIAVDRYLVITRPMKASVRISHRRALIVIAVVWLYSLLWVLPPLFGWSRY-----VLEGLLTSCSFDYLSRDD 160
                       170       180       190
                ....*....|....*....|....*....|....*.
gi 47576087 192 CSDTRINQLVFLGavvlFVAPCILIVFSYVRIAMAV 227
Cdd:cd15083 161 ANRSYVICLLIFG----FVLPLLIIIYCYSFIFRAV 192
7tmA_Adenosine_R_A2A cd15068
adenosine receptor subtype A2A, member of the class A family of seven-transmembrane G ...
34-301 3.60e-09

adenosine receptor subtype A2A, member of the class A family of seven-transmembrane G protein-coupled receptors; The A2A receptor, a member of the adenosine receptor family of G protein-coupled receptors, binds adenosine as its endogenous ligand and is involved in regulating myocardial oxygen consumption and coronary blood flow. High-affinity A2A and low-affinity A2B receptors are preferentially coupled to G proteins of the stimulatory (Gs) family, which lead to activation of adenylate cyclase and thereby increasing the intracellular cAMP levels. The A2A receptor activation protects against tissue injury and acts as anti-inflammatory agent. In human skin endothelial cells, activation of A2B receptor, but not the A2A receptor, promotes angiogenesis. Alternatively, activated A2A receptor, but not the A2B receptor, promotes angiogenesis in human umbilical vein and lung microvascular endothelial cells. The A2A receptor alters cardiac contractility indirectly by modulating the anti-adrenergic effect of A1 receptor, while the A2B receptor exerts direct effects on cardiac contractile function, but does not modulate beta-adrenergic or A1 anti-adrenergic effects.


Pssm-ID: 320196 [Multi-domain]  Cd Length: 293  Bit Score: 56.87  E-value: 3.60e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  34 LCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLAshVSGTEIISYAHCLTQMYFLISFANVD 113
Cdd:cd15068   8 LAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAIT--ISTGFCAACHGCLFIACFVLVLTQSS 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 114 TFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSIPEISHfYCDAYLLMKLACS 193
Cdd:cd15068  86 IFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKNHSQ-GCGEGQVACLFED 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 194 DTRINQLVFLGAVVLFVAPCILIVFSYVRIAMAVFQ---------IPSAKGR---HKAFSTCSSHLTVVILFYGTVLGIY 261
Cdd:cd15068 165 VVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRqlkqmesqpLPGERARstlQKEVHAAKSLAIIVGLFALCWLPLH 244
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*...
gi 47576087 262 IRPPDSFSTQD---TVATIMYTVV-----TPMLNPFIYSLRNKDMKQT 301
Cdd:cd15068 245 IINCFTFFCPDcshAPLWLMYLAIvlshtNSVVNPFIYAYRIREFRQT 292
7tmA_CCK_R cd15206
cholecystokinin receptors, member of the class A family of seven-transmembrane G ...
31-166 3.91e-09

cholecystokinin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Cholecystokinin receptors (CCK-AR and CCK-BR) are a group of G-protein coupled receptors which bind the peptide hormones cholecystokinin (CCK) or gastrin. CCK, which facilitates digestion in the small intestine, and gastrin, a major regulator of gastric acid secretion, are highly similar peptides. Like gastrin, CCK is a naturally-occurring linear peptide that is synthesized as a preprohormone, then proteolytically cleaved to form a family of peptides with the common C-terminal sequence (Gly-Trp-Met-Asp-Phe-NH2), which is required for full biological activity. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors.


Pssm-ID: 320334 [Multi-domain]  Cd Length: 269  Bit Score: 56.63  E-value: 3.91e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  31 WAFLCMY----LVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVD-----VCFTTNLIPRLLASHVSGTEIisyahCLT 101
Cdd:cd15206   1 ELIIPLYsvifLLAVVGNILVIVTLVQNKRMRTVTNVFLLNLAVSDlllavFCMPFTLVGQLLRNFIFGEVM-----CKL 75
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 47576087 102 QMYFLISFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLIS---LVHTLLMN 166
Cdd:cd15206  76 IPYFQAVSVSVSTFTLVAISLERYFAICHPLKSRVWQTLSHAYKVIAGIWLLSFLIMspiLVFSNLIP 143
7tmA_alpha1_AR cd15062
alpha-1 adrenergic receptors, member of the class A family of seven-transmembrane G ...
38-159 7.17e-09

alpha-1 adrenergic receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-1 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that primarily mediate smooth muscle contraction: alpha-1A, alpha-1B, and alpha-1D. Activation of alpha-1 receptors by catecholamines such as norepinephrine and epinephrine couples to the G(q) protein, which then activates the phospholipase C pathway, leading to an increase in IP3 and calcium. Consequently, the elevation of intracellular calcium concentration leads to vasoconstriction in smooth muscle of blood vessels. In addition, activation of alpha-1 receptors by phenylpropanolamine (PPA) produces anorexia and may induce appetite suppression in rats.


Pssm-ID: 320190 [Multi-domain]  Cd Length: 261  Bit Score: 55.57  E-value: 7.17e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  38 LVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANVDTFLL 117
Cdd:cd15062  12 LFAIGGNLLVILSVACNRHLRTPTHYFIVNLAVADLLLSFTVLPFSATLEVLGYWAFGRIFCDVWAAVDVLCCTASIMSL 91
                        90       100       110       120
                ....*....|....*....|....*....|....*....|..
gi 47576087 118 AAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISL 159
Cdd:cd15062  92 CVISVDRYIGVRYPLNYPTIVTARRATVALLIVWVLSLVISI 133
7tmA_5-HT7 cd15329
serotonin receptor subtype 7, member of the class A family of seven-transmembrane G ...
28-159 8.59e-09

serotonin receptor subtype 7, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT7 receptor, one of 14 mammalian serotonin receptors, is a member of the class A of GPCRs and is activated by the neurotransmitter serotonin (5-hydroxytryptamine, 5-HT). 5-HT7 receptor mainly couples to Gs protein, which positively stimulates adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. 5-HT7 receptor is expressed in various human tissues, mainly in the brain, the lower gastrointestinal tract and in vital blood vessels including the coronary artery. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320452 [Multi-domain]  Cd Length: 260  Bit Score: 55.35  E-value: 8.59e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLI 107
Cdd:cd15329   2 LIGIVLLIIILGTVVGNALVIIAVCLVKKLRTPSNYLIVSLAVSDLLVALLVMPLAIIYELSGYWPFGEILCDVWISFDV 81
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|..
gi 47576087 108 SFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISL 159
Cdd:cd15329  82 LLCTASILNLCAISVDRYLVITRPLTYAVKRTPKRMALMIAIVWLLSALISI 133
7tmA_alpha1B_AR cd15326
alpha-1 adrenergic receptors subtype B, member of the class A family of seven-transmembrane G ...
38-159 1.06e-08

alpha-1 adrenergic receptors subtype B, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-1 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that primarily mediate smooth muscle contraction: alpha-1A, alpha-1B, and alpha-1D. Activation of alpha-1 receptors by catecholamines such as norepinephrine and epinephrine couples to the G(q) protein, which then activates the phospholipase C pathway, leading to an increase in IP3 and calcium. Consequently, the elevation of intracellular calcium concentration leads to vasoconstriction in smooth muscle of blood vessels. In addition, activation of alpha-1 receptors by phenylpropanolamine (PPA) produces anorexia and may induce appetite suppression in rats.


Pssm-ID: 320449 [Multi-domain]  Cd Length: 261  Bit Score: 55.28  E-value: 1.06e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  38 LVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANVDTFLL 117
Cdd:cd15326  12 LFAIVGNILVILSVVCNRHLRIPTNYFIVNLAIADLLLSFTVLPFSATLEILGYWVFGRIFCDIWAAVDVLCCTASILSL 91
                        90       100       110       120
                ....*....|....*....|....*....|....*....|..
gi 47576087 118 AAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISL 159
Cdd:cd15326  92 CAISIDRYIGVRHSLQYPTIVTRKRAILALLGVWVLSTVISI 133
7tmA_Galanin_R-like cd14971
galanin receptor and related proteins, member of the class A family of seven-transmembrane G ...
33-159 1.25e-08

galanin receptor and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes G-protein coupled galanin receptors, kisspeptin receptor and allatostatin-A receptor (AstA-R) in insects. These receptors, which are members of the class A of seven transmembrane GPCRs, share a high degree of sequence homology among themselves. The galanin receptors bind galanin, a neuropeptide that is widely expressed in the brain, peripheral tissues, and endocrine glands. Galanin is implicated in numerous neurological and psychiatric diseases including Alzheimer's disease, eating disorders, and epilepsy, among many others. KiSS1-derived peptide receptor (also known as GPR54 or kisspeptin receptor) binds the peptide hormone kisspeptin (metastin), which encoded by the metastasis suppressor gene (KISS1) expressed in various endocrine and reproductive tissues. AstA-R is a G-protein coupled receptor that binds allatostatin A. Three distinct types of allatostatin have been identified in the insects and crustaceans: AstA, AstB, and AstC. They both inhibit the biosynthesis of juvenile hormone and exert an inhibitory influence on food intake. Therefore, allatostatins are considered as potential targets for insect control.


Pssm-ID: 320102 [Multi-domain]  Cd Length: 281  Bit Score: 55.17  E-value: 1.25e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  33 FLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANV 112
Cdd:cd14971   7 FALIFLLGLVGNSLVILVVARNKPMRSTTNLFILNLAVADLTFLLFCVPFTATIYPLPGWVFGDFMCKFVHYFQQVSMHA 86
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*..
gi 47576087 113 DTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISL 159
Cdd:cd14971  87 SIFTLVAMSLDRFLAVVYPLRSLHIRTPRNALAASGCIWVVSLAVAA 133
7tmA_Beta1_AR cd15958
beta-1 adrenergic receptors (adrenoceptors), member of the class A family of ...
38-223 1.43e-08

beta-1 adrenergic receptors (adrenoceptors), member of the class A family of seven-transmembrane G protein-coupled receptors; The beta-1 adrenergic receptor (beta-1 adrenoceptor), also known as beta-1 AR, is activated by adrenaline (epinephrine) and plays important roles in regulating cardiac function and heart rate. The human heart contains three subtypes of the beta AR: beta-1 AR, beta-2 AR, and beta-3 AR. Beta-1 AR and beta-2 AR, which expressed at about a ratio of 70:30, are the major subtypes involved in modulating cardiac contractility and heart rate by positively stimulating the G(s) protein-adenylate cyclase-cAMP-PKA signaling pathway. In contrast, beta-3 AR produces negative inotropic effects by activating inhibitory G(i) proteins. The aberrant expression of betrayers can lead to cardiac dysfunction such as arrhythmias or heart failure.


Pssm-ID: 320624 [Multi-domain]  Cd Length: 298  Bit Score: 54.91  E-value: 1.43e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  38 LVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHC--LTQMYFLISFANVDTf 115
Cdd:cd15958  12 LLIVAGNVLVIVAIGRTQRLQTLTNLFITSLACADLVMGLLVVPFGATLVVRGRWLYGSFFCelWTSVDVLCVTASIET- 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 116 lLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMnrlTFCSSIPEISHFYCDAyllmklACSDT 195
Cdd:cd15958  91 -LCVIAIDRYLAITSPFRYQSLLTRARAKGIVCTVWAISALVSFLPIMMH---WWRDEDDQALKCYEDP------GCCDF 160
                       170       180
                ....*....|....*....|....*....
gi 47576087 196 RINQLVFLG-AVVLFVAPCILIVFSYVRI 223
Cdd:cd15958 161 VTNRAYAIAsSIISFYIPLLIMIFVYLRV 189
7tmA_Vasopressin_Oxytocin cd15196
vasopressin and oxytocin receptors, member of the class A family of seven-transmembrane G ...
36-229 2.00e-08

vasopressin and oxytocin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Vasopressin (also known as arginine vasopressin or anti-diuretic hormone) and oxytocin are synthesized in the hypothalamus and are released from the posterior pituitary gland. The actions of vasopressin are mediated by the interaction of this hormone with three receptor subtypes: V1aR, V1bR, and V2R. These subtypes are differ in localization, function, and signaling pathways. Activation of V1aR and V1bR stimulate phospholipase C, while activation of V2R stimulates adenylate cyclase. Although vasopressin and oxytocin differ only by two amino acids and stimulate the same cAMP/PKA pathway, they have divergent physiological functions. Vasopressin is involved in regulating blood pressure and the balance of water and sodium ions, whereas oxytocin plays an important role in the uterus during childbirth and in lactation.


Pssm-ID: 320324 [Multi-domain]  Cd Length: 264  Bit Score: 54.16  E-value: 2.00e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  36 MYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVD--VCFTtNLIPRLlASHVSGTEIISYAHCLTQMYFLISFANVD 113
Cdd:cd15196  10 ILVLALFGNSCVLLVLYRRRRKLSRMHLFILHLSVADllVALF-NVLPQL-IWDITYRFYGGDLLCRLVKYLQVVGMYAS 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 114 TFLLAAMALDRFVAICYPLQYHTiITPQLCVGLAAVVWICSGLIslvhtllmnrltfcsSIPEISHFYCDAYLLMKLACS 193
Cdd:cd15196  88 SYVLVATAIDRYIAICHPLSSHR-WTSRRVHLMVAIAWVLSLLL---------------SIPQLFIFSYQEVGSGVYDCW 151
                       170       180       190       200
                ....*....|....*....|....*....|....*....|.
gi 47576087 194 DTRINQL-----VFLGAVVLFVAPCILIVFSYVRIAMAVFQ 229
Cdd:cd15196 152 ATFEPPWglrayITWFTVAVFVVPLIILAFCYGRICYVVWR 192
7tmA_CCK-BR cd15979
cholecystokinin receptor type B, member of the class A family of seven-transmembrane G ...
36-157 2.17e-08

cholecystokinin receptor type B, member of the class A family of seven-transmembrane G protein-coupled receptors; Cholecystokinin receptors (CCK-AR and CCK-BR) are a group of G-protein coupled receptors which bind the peptide hormones cholecystokinin (CCK) or gastrin. CCK, which facilitates digestion in the small intestine, and gastrin, a major regulator of gastric acid secretion, are highly similar peptides. Like gastrin, CCK is a naturally-occurring linear peptide that is synthesized as a preprohormone, then proteolytically cleaved to form a family of peptides with the common C-terminal sequence (Gly-Trp-Met-Asp-Phe-NH2), which is required for full biological activity. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors.


Pssm-ID: 320645 [Multi-domain]  Cd Length: 275  Bit Score: 54.44  E-value: 2.17e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  36 MYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDV-----CFTTNLIPRLLASHVSGTEIisyahCLTQMYFLISFA 110
Cdd:cd15979  10 IFLLSVFGNMLIIVVLGLNKRLRTVTNSFLLSLALSDLmlavfCMPFTLIPNLMGTFIFGEVI-----CKAVAYLMGVSV 84
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*..
gi 47576087 111 NVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLI 157
Cdd:cd15979  85 SVSTFSLVAIAIERYSAICNPLQSRVWQTRSHAYRVIAATWLLSGLI 131
7tmA_MC1R cd15351
melanocortin receptor subtype 1, member of the class A family of seven-transmembrane G ...
33-160 2.29e-08

melanocortin receptor subtype 1, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320473 [Multi-domain]  Cd Length: 271  Bit Score: 54.03  E-value: 2.29e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  33 FLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFT-TNLIPRLLASHVSGTEIISYAHCLTQMYFLISFAN 111
Cdd:cd15351   7 FLFLGLVSLVENILVVVAIAKNRNLHSPMYYFICCLAVSDMLVSvSNLIETLFMLLLEHGVLVCRAPMLQHMDNVIDTMI 86
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....
gi 47576087 112 VDTFL-----LAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLV 160
Cdd:cd15351  87 CSSVVsslsfLGAIAVDRYITIFYALRYHSIMTLQRAVNAIAGIWLASTVSSTL 140
7tmA_CCK-AR cd15978
cholecystokinin receptor type A, member of the class A family of seven-transmembrane G ...
27-170 2.51e-08

cholecystokinin receptor type A, member of the class A family of seven-transmembrane G protein-coupled receptors; Cholecystokinin receptors (CCK-AR and CCK-BR) are a group of G-protein coupled receptors which bind the peptide hormones cholecystokinin (CCK) or gastrin. CCK, which facilitates digestion in the small intestine, and gastrin, a major regulator of gastric acid secretion, are highly similar peptides. Like gastrin, CCK is a naturally-occurring linear peptide that is synthesized as a preprohormone, then proteolytically cleaved to form a family of peptides with the common C-terminal sequence (Gly-Trp-Met-Asp-Phe-NH2), which is required for full biological activity. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors.


Pssm-ID: 320644 [Multi-domain]  Cd Length: 278  Bit Score: 54.11  E-value: 2.51e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  27 QILFWAFLcmYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDV-----CFTTNLIPRLLASHVSGTEIisyahCLT 101
Cdd:cd15978   3 RILLYSLI--FLLSVLGNSLIIAVLIRNKRMRTVTNIFLLSLAVSDLmlclfCMPFTLIPNLLKDFIFGSAV-----CKT 75
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 47576087 102 QMYFLISFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTF 170
Cdd:cd15978  76 ATYFMGISVSVSTFNLVAISLERYSAICKPLKSRVWQTKSHALKVIAATWCLSFTIMLPYPIYSNLVPF 144
7tmA_MC3R cd15352
melanocortin receptor subtype 3, member of the class A family of seven-transmembrane G ...
33-160 2.52e-08

melanocortin receptor subtype 3, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320474 [Multi-domain]  Cd Length: 272  Bit Score: 54.12  E-value: 2.52e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  33 FLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVD--VCFTTNLIPRLLASHVSGTEIISYAHC------LTQMY 104
Cdd:cd15352   7 FLTLGIVSLLENILVILAVVKNKNLHSPMYFFLCSLAVADmlVSVSNSLETIMIAVLNSGYLVISDQFIqhmdnvFDSMI 86
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 47576087 105 FLISFANVDTFLlaAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLV 160
Cdd:cd15352  87 CISLVASICNLL--AIAVDRYVTIFYALRYHSIMTVRKALVLIAVIWVVCIVCGIV 140
7tmA_PR4-like cd15392
neuropeptide Y receptor-like found in insect and related proteins, member of the class A ...
28-227 2.75e-08

neuropeptide Y receptor-like found in insect and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes a novel G protein-coupled receptor (also known as PR4 receptor) from Drosophila melanogaster, which can be activated by the members of the neuropeptide Y (NPY) family, including NPY, peptide YY (PYY) and pancreatic polypeptide (PP), when expressed in Xenopus oocytes. These homologous peptides of 36-amino acids in length contain a hairpin-like structural motif, which referred to as the pancreatic polypeptide fold, and function as gastrointestinal hormones and neurotransmitters. The PR4 receptor also shares strong sequence homology to the mammalian tachykinin receptors (NK1R, NK2R, and NK3R), whose endogenous ligands are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB), respectively. The tachykinins function as excitatory transmitters on neurons and cells in the gastrointestinal tract.


Pssm-ID: 320514 [Multi-domain]  Cd Length: 287  Bit Score: 53.90  E-value: 2.75e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCmyLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLAShvsgTEIISY-----AHCLTQ 102
Cdd:cd15392   4 ILMYSTIF--VLAVGGNGLVCYIVVSYPRMRTVTNYFIVNLALSDILMAVFCVPFSFIA----LLILQYwpfgeFMCPVV 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 103 MYFLISFANVDTFLLAAMALDRFVAICYPLQYHtiITPQLCVGLAAVVWICSGLISLvHTLLMNRLTfcssipEISHFYC 182
Cdd:cd15392  78 NYLQAVSVFVSAFTLVAISIDRYVAIMWPLRPR--MTKRQALLLIAVIWIFALATAL-PIAITSRLF------EDSNASC 148
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*
gi 47576087 183 DAYLLMKLACSDTRINQLVFLGAVVLFVAPCILIVFSYVRIAMAV 227
Cdd:cd15392 149 GQYICTESWPSDTNRYIYSLVLMILQYFVPLAVLVFTYTRIGIVV 193
7tmA_Histamine_H3R_H4R cd15048
histamine receptor subtypes H3R and H4R, member of the class A family of seven-transmembrane G ...
33-223 2.92e-08

histamine receptor subtypes H3R and H4R, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes histamine subtypes H3R and H4R, members of the histamine receptor family, which belong to the class A of GPCRs. Histamine plays a key role as chemical mediator and neurotransmitter in various physiological and pathophysiological processes in the central and peripheral nervous system. Histamine exerts its functions by binding to four different G protein-coupled receptors (H1-H4). The H3 and H4 receptors couple to the G(i)-proteins, which leading to the inhibition of cAMP formation. The H3R receptor functions as a presynaptic autoreceptors controlling histamine release and synthesis. The H4R plays an important role in histamine-mediated chemotaxis in mast cells and eosinophils. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320176 [Multi-domain]  Cd Length: 296  Bit Score: 53.85  E-value: 2.92e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  33 FLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMY--FLISFA 110
Cdd:cd15048   7 ISVLILVTVIGNLLVILAFIKDKKLRTVSNFFLLNLAVADFLVGLVSMPFYIPYTLTGKWPFGKVFCKAWLVvdYTLCTA 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 111 NVdtFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSIPEIShfyCDAYLLMKL 190
Cdd:cd15048  87 SA--LTIVLISLDRYLSVTKAVKYRAKQTKRRTVLLMALVWILAFLLYGPAIIGWDLWTGYSIVPTGD---CEVEFFDHF 161
                       170       180       190
                ....*....|....*....|....*....|...
gi 47576087 191 AcsdtrinqLVFLGAVVLFVAPCILIVFSYVRI 223
Cdd:cd15048 162 Y--------FTFITSVLEFFIPFISVSFFNLLI 186
7tmA_NPFFR cd15207
neuropeptide FF receptors, member of the class A family of seven-transmembrane G ...
32-253 3.30e-08

neuropeptide FF receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Neuropeptide FF (NPFF) is a mammalian octapeptide that belongs to a family of neuropeptides containing an RF-amide motif at their C-terminus that have been implicated in a wide range of physiological functions in the brain including pain sensitivity, insulin release, food intake, memory, blood pressure, and opioid-induced tolerance and hyperalgesia. The effects of these peptides are mediated through neuropeptide FF1 and FF2 receptors (NPFF1-R and NPFF2-R) which are predominantly expressed in the brain. NPFF induces pro-nociceptive effects, mainly through the NPFF1-R, and anti-nociceptive effects, mainly through the NPFF2-R. NPFF has been shown to inhibit adenylate cyclase via the Gi protein coupled to NPFF1-R.


Pssm-ID: 320335 [Multi-domain]  Cd Length: 291  Bit Score: 53.78  E-value: 3.30e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  32 AFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHC-LTQMYFLISFA 110
Cdd:cd15207   6 SYSLIFLLCVVGNVLVCLVVAKNPRMRTVTNYFILNLAVSDLLVGVFCMPFTLVDNILTGWPFGDVMCkLSPLVQGVSVA 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 111 nVDTFLLAAMALDRFVAICYPLQYHtiITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFcSSIPEISHFYCD---AYLL 187
Cdd:cd15207  86 -ASVFTLVAIAVDRYRAVVHPTEPK--LTNRQAFVIIVAIWVLALAIMIPQALVLEVKEY-QFFRGQTVHICVefwPSDE 161
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 47576087 188 MKlacsdtRINQLVFLgaVVLFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHL-----------TVVILF 253
Cdd:cd15207 162 YR------KAYTTSLF--VLCYVAPLLIIAVLYVRIGYRLWFKPVPGGGSASREAQAAVSkkkvrvikmliVVVVLF 230
7tmA_alpha-2D_AR cd15324
alpha-2 adrenergic receptors subtype D, member of the class A family of seven-transmembrane G ...
38-158 3.73e-08

alpha-2 adrenergic receptors subtype D, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-2 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that have a key role in neurotransmitter release: alpha-2A, alpha-2B, and alpha-2C. In addition, a fourth subtype, alpha-2D is present in ray-finned fishes and amphibians, but is not found in humans. The alpha-2 receptors are found in both central and peripheral nervous system and serve to produce inhibitory functions through the G(i) proteins. Thus, the alpha-2 receptors inhibit adenylate cyclase, which decreases cAMP production and thereby decreases calcium influx during the action potential. Consequently, lowered levels of calcium will lead to a decrease in neurotransmitter release by negative feedback.


Pssm-ID: 320447 [Multi-domain]  Cd Length: 256  Bit Score: 53.34  E-value: 3.73e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  38 LVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANVDTFLL 117
Cdd:cd15324  12 LVTIVGNVLVVVAVFTSRALRAPQNLFLVSLASADILVATLVIPFSLANEVMGYWYFGSTWCAFYLALDVLFCTSSIVHL 91
                        90       100       110       120
                ....*....|....*....|....*....|....*....|.
gi 47576087 118 AAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLIS 158
Cdd:cd15324  92 CAISLDRYWSVTKAVSYNLKRTPKRIKRMIAVVWVISAVIS 132
7tmA_Vasopressin-like cd14986
vasopressin receptors and its related G protein-coupled receptors, member of the class A ...
36-245 6.25e-08

vasopressin receptors and its related G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Members of this group form a subfamily within the class A G-protein coupled receptors (GPCRs), which includes the vasopressin and oxytocin receptors, the gonadotropin-releasing hormone receptors (GnRHRs), the neuropeptide S receptor (NPSR), and orphan GPR150. These receptors share significant sequence homology with each other, suggesting that they have a common evolutionary origin. Vasopressin, also known as arginine vasopressin or anti-diuretic hormone, is a neuropeptide synthesized in the hypothalamus. The actions of vasopressin are mediated by the interaction of this hormone with three tissue-specific subtypes: V1AR, V1BR, and V2R. Although vasopressin differs from oxytocin by only two amino acids, they have divergent physiological functions. Vasopressin is involved in regulating osmotic and cardiovascular homeostasis, whereas oxytocin plays an important role in the uterus during childbirth and in lactation. GnRHR, also known as luteinizing hormone releasing hormone receptor (LHRHR), plays an central role in vertebrate reproductive function; its activation by binding to GnRH leads to the release of follicle stimulating hormone (FSH) and luteinizing hormone (LH) from the pituitary gland. Neuropeptide S (NPS) promotes arousal and anxiolytic-like effects by activating its cognate receptor NPSR. NPSR has also been associated with asthma and allergy. GPR150 is an orphan receptor closely related to the oxytocin and vasopressin receptors.


Pssm-ID: 320117 [Multi-domain]  Cd Length: 295  Bit Score: 53.15  E-value: 6.25e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  36 MYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVD--VCF---TTNLIPRLLASHVSGT---EIISYAHCLTqmyfLI 107
Cdd:cd14986  10 LFVFTLVGNGLVILVLRRKRKKRSRVNIFILNLAIADlvVAFftvLTQIIWEATGEWVAGDvlcRIVKYLQVVG----LF 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 108 SfanvDTFLLAAMALDRFVAICYPLQyhTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSIPEI-SHFYCDAYL 186
Cdd:cd14986  86 A----STYILVSMSLDRYQAIVKPMS--SLKPRKRARLMIVVAWVLSFLFSIPQLVIFVERELGDGVHQCwSSFYTPWQR 159
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 187 LMklacsdtrinqLVFLGAVVLFVAPCILIVFSYVRIAMAVFQIPSAK-GRHKAFSTCSS 245
Cdd:cd14986 160 KV-----------YITWLATYVFVIPLIILSYCYGRILRTIWIRSRQKtDRPIAPTAMSC 208
7tmA_GPR119_R_insulinotropic_receptor cd15104
G protein-coupled receptor 119, also called glucose-dependent insulinotropic receptor, member ...
40-157 7.07e-08

G protein-coupled receptor 119, also called glucose-dependent insulinotropic receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR119 is activated by oleoylethanolamide (OEA), a naturally occurring bioactive lipid with hypophagic and anti-obesity effects. Immunohistochemistry and double-immunofluorescence studies revealed the predominant GPR119 localization in pancreatic polypeptide (PP)-cells of islets. In addition, GPR119 expression is elevated in islets of obese hyperglycemic mice as compared to control islets, suggesting a possible involvement of this receptor in the development of obesity and diabetes. GPR119 has a significant sequence similarity with the members of the endothelial differentiation gene family. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320232 [Multi-domain]  Cd Length: 283  Bit Score: 52.76  E-value: 7.07e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  40 TVAGNTLIFLAISSDPRL-HTPMYFFLANLSFVDVcFTTNLIPRLLASHVSGTEIISYA-HCLTQMYFLISFANVDTFLL 117
Cdd:cd15104  13 IITGNLLVIVALLKLIRKkDTKSNCFLLNLAIADF-LVGLAIPGLATDELLSDGENTQKvLCLLRMCFVITSCAASVLSL 91
                        90       100       110       120
                ....*....|....*....|....*....|....*....|
gi 47576087 118 AAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLI 157
Cdd:cd15104  92 AAIAFDRYLALKQPLRYKQIMTGKSAGALIAGLWLYSGLI 131
7tmA_AstA_R_insect cd15096
allatostatin-A receptor in insects, member of the class A family of seven-transmembrane G ...
38-253 7.43e-08

allatostatin-A receptor in insects, member of the class A family of seven-transmembrane G protein-coupled receptors; The G protein-coupled AstA receptor binds allatostatin A. Three distinct types of allatostatin have been identified in the insects and crustaceans: AstA, AstB, and AstC. They both inhibit the biosynthesis of juvenile hormone and exert an inhibitory influence on food intake. Therefore, allatostatins are considered as potential targets for insect control.


Pssm-ID: 320224 [Multi-domain]  Cd Length: 284  Bit Score: 52.68  E-value: 7.43e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  38 LVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANVDTFLL 117
Cdd:cd15096  12 IVGLIGNSLVILVVLSNQQMRSTTNILILNLAVADLLFVVFCVPFTATDYVLPTWPFGDVWCKIVQYLVYVTAYASVYTL 91
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 118 AAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWIcsglislvhtllmnrLTFCSSIPEISHFYCDAYLLMKLACSDTRI 197
Cdd:cd15096  92 VLMSLDRYLAVVHPITSMSIRTERNTLIAIVGIWI---------------VILVANIPVLFLHGVVSYGFSSEAYSYCTF 156
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 198 NQLVFLGAVVLF--------VAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSH------LTVVILF 253
Cdd:cd15096 157 LTEVGTAAQTFFtsfflfsyLIPLTLICVLYMLMLRRLRRQKSPGGRRSAESQRGKRrvtrlvVVVVVVF 226
7tmA_MCR cd15103
melanocortin receptors, member of the class A family of seven-transmembrane G protein-coupled ...
33-160 7.96e-08

melanocortin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320231 [Multi-domain]  Cd Length: 270  Bit Score: 52.49  E-value: 7.96e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  33 FLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFT-TNLIPRLLASHVSGTEIISYAHCLTQMYFLISFAN 111
Cdd:cd15103   7 FLTLGIVSLLENILVILAIAKNKNLHSPMYFFICSLAVADMLVSvSNALETIVIILLNNGYLVPRDSFEQHIDNVIDSMI 86
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....
gi 47576087 112 VDTFL-----LAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLV 160
Cdd:cd15103  87 CSSLLasicsLLAIAVDRYITIFYALRYHSIMTVRRAGVIITAIWVFCTVCGIL 140
7tmA_Prostanoid_R cd14981
G protein-coupled receptors for prostanoids, member of the class A family of ...
36-161 9.98e-08

G protein-coupled receptors for prostanoids, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostanoids are the cyclooxygenase (COX) metabolites of arachidonic acid, which include the prostaglandins (PGD2, PGE2, PGF2alpha), prostacyclin (PGI2), and thromboxane A2 (TxA2). These five major bioactive prostanoids acts as mediators or modulators in a wide range of physiological and pathophysiological processes within the kidney and play important roles in inflammation, platelet aggregation, and vasoconstriction/relaxation, among many others. They act locally by preferentially interacting with G protein-coupled receptors designated DP, EP. FP, IP, and TP, respectively. The phylogenetic tree suggests that the prostanoid receptors can be grouped into two major branches: G(s)-coupled (DP1, EP2, EP4, and IP) and G(i)- (EP3) or G(q)-coupled (EP1, FP, and TP), forming three clusters.


Pssm-ID: 320112 [Multi-domain]  Cd Length: 288  Bit Score: 52.25  E-value: 9.98e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  36 MYLVTVAGN--TLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANVD 113
Cdd:cd14981  10 MFVFGVLGNllALIVLARSSKSHKWSVFYRLVAGLAITDLLGILLTSPVVLAVYASNFEWDGGQPLCDYFGFMMSFFGLS 89
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*....
gi 47576087 114 T-FLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVH 161
Cdd:cd14981  90 SlLIVCAMAVERFLAITHPFFYNSHVKKRRARLMLGAVWAFALLIASLP 138
7tmA_5-HT6 cd15054
serotonin receptor subtype 6, member of the class A family of seven-transmembrane G ...
32-226 1.12e-07

serotonin receptor subtype 6, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT6 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the mammalian central nervous system (CNS). 5-HT6 receptors are selectively linked to G proteins of the G(s) family, which positively stimulate adenylate cyclase, causing cAMP formation and activation of protein kinase A. The 5-HT6 receptors mediates excitatory neurotransmission and are involved in learning and memory; thus they are promising targets for the treatment of cognitive impairment. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320182 [Multi-domain]  Cd Length: 267  Bit Score: 52.11  E-value: 1.12e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  32 AFLCMY-LVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFA 110
Cdd:cd15054   5 AFLCLIiLLTVAGNSLLILLIFTQRSLRNTSNYFLVSLFMSDLMVGLVVMPPAMLNALYGRWVLARDFCPIWYAFDVMCC 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 111 NVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLL-MNRLTFCSSIPEIShfycdaYLLMK 189
Cdd:cd15054  85 SASILNLCVISLDRYLLIISPLRYKLRMTPPRALALILAAWTLAALASFLPIELgWHELGHERTLPNLT------SGTVE 158
                       170       180       190
                ....*....|....*....|....*....|....*..
gi 47576087 190 LACSDTRINQLVFLGAVVLFVAPCILIVFSYVRIAMA 226
Cdd:cd15054 159 GQCRLLVSLPYALVASCLTFFLPSGAICFTYCRILLA 195
7tmA_leucokinin-like cd15393
leucokinin-like peptide receptor from tick and related proteins, member of the class A family ...
38-224 1.24e-07

leucokinin-like peptide receptor from tick and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes a leucokinin-like peptide receptor from the Southern cattle tick, Boophilus microplus, a pest of cattle world-wide. Leucokinins are invertebrate neuropeptides that exhibit myotropic and diuretic activity. This receptor is the first neuropeptide receptor known from the Acari and the second known in the subfamily of leucokinin-like peptide G-protein-coupled receptors. The other known leucokinin-like peptide receptor is a lymnokinin receptor from the mollusc Lymnaea stagnalis.


Pssm-ID: 320515 [Multi-domain]  Cd Length: 288  Bit Score: 52.03  E-value: 1.24e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  38 LVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANVDTFLL 117
Cdd:cd15393  12 LVAVVGNFLVIWVVAKNRRMRTVTNIFIANLAVADIIIGLFSIPFQFQAALLQRWVLPRFMCPFCPFVQVLSVNVSVFTL 91
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 118 AAMALDRFVAICYPLQYHTiiTPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSIPEISHFYCdayllMKLACSDTRI 197
Cdd:cd15393  92 TVIAVDRYRAVIHPLKARC--SKKSAKIIILIIWILALLVALPVALALRVEELTDKTNNGVKPFC-----LPVGPSDDWW 164
                       170       180
                ....*....|....*....|....*..
gi 47576087 198 NQLVFLGAVVLFVAPCILIVFSYVRIA 224
Cdd:cd15393 165 KIYNLYLVCVQYFVPLVIICYAYTRIA 191
7tmA_DmOct-betaAR-like cd15066
Drosophila melanogaster beta-adrenergic receptor-like octopamine receptors and similar ...
34-300 1.31e-07

Drosophila melanogaster beta-adrenergic receptor-like octopamine receptors and similar receptors in bilateria; member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes Drosophila beta-adrenergic-like octopamine receptors and similar proteins. The biogenic amine octopamine is the invertebrate equivalent of vertebrate adrenergic neurotransmitters and exerts its effects through different G protein-coupled receptor types. Insect octopamine receptors are involved in the modulation of carbohydrate metabolism, muscular tension, cognition and memory. The activation of octopamine receptors mediating these actions leads to an increase in adenylate cyclase activity, thereby increasing cAMP levels. In Drosophila melanogaster, three subgroups have been classified on the basis of their structural homology and functional equivalents with vertebrate beta-adrenergic receptors: DmOctBeta1R, DmOctBeta2R, and DmOctBeta3R.


Pssm-ID: 320194 [Multi-domain]  Cd Length: 265  Bit Score: 51.99  E-value: 1.31e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  34 LCMYLVTVA---GNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFA 110
Cdd:cd15066   4 FAMTLIILAaifGNLLVIISVMRHRKLRVITNYFVVSLAMADMLVALCAMTFNASVEITGRWMFGYFMCDVWNSLDVYFS 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 111 NVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLL-----MNRLTFCSSIPEISHFYCD-A 184
Cdd:cd15066  84 TASILHLCCISVDRYYAIVQPLEYPSKMTKRRVAIMLANVWISPALISFLPIFLgwyttEEHLQYRKTHPDQCEFVVNkI 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 185 YLLMKLACSdtrinqlvflgavvlFVAPCILIVFSYVRIAMavfqipSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRP 264
Cdd:cd15066 164 YALISSSVS---------------FWIPCIVMIFTYYRIYL------EAKREHKAAKTLGIIMGAFILCWLPFFLWYVTT 222
                       250       260       270       280
                ....*....|....*....|....*....|....*....|.
gi 47576087 265 P---DSFSTQDTVATIMYTV--VTPMLNPFIYSLRNKDMKQ 300
Cdd:cd15066 223 TlcgDACPYPPILVSILFWIgyFNSTLNPLIYAYFNRDFRE 263
7tmA_D2-like_dopamine_R cd15053
D2-like dopamine receptors, member of the class A family of seven-transmembrane G ...
30-295 1.89e-07

D2-like dopamine receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Dopamine receptors are members of the class A G protein-coupled receptors that are involved in many neurological processes in the central nervous system (CNS). The neurotransmitter dopamine is the primary endogenous agonist for dopamine receptors. Dopamine receptors consist of at least five subtypes: D1, D2, D3, D4, and D5. The D1 and D5 subtypes are members of the D1-like family of dopamine receptors, whereas the D2, D3 and D4 subtypes are members of the D2-like family. The D1-like family receptors are coupled to G proteins of the G(s) family, which activate adenylate cyclase, causing cAMP formation and activation of protein kinase A. In contrast, activation of D2-like family receptors is linked to G proteins of the G(i) family, which inhibit adenylate cyclase. Dopamine receptors are major therapeutic targets for neurological and psychiatric disorders such as drug abuse, depression, schizophrenia, or Parkinson's disease.


Pssm-ID: 320181 [Multi-domain]  Cd Length: 263  Bit Score: 51.19  E-value: 1.89e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  30 FWA-FLCMY-LVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTE-IISYAHCLTQMYFL 106
Cdd:cd15053   2 YWAlFLLLLpLLTVFGNVLVIMSVFRERSLQTATNYFIVSLAVADLLVAILVMPFAVYVEVNGGKwYLGPILCDIYIAMD 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 107 ISFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNrlTFCSSIPEISHFYCDAYL 186
Cdd:cd15053  82 VMCSTASIFNLCAISIDRYIAVTQPIKYARQKNSKRVLLTIAIVWVVSAAIACPLLFGLN--NVPYRDPEECRFYNPDFI 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 187 LMKLACSdtrinqlvflgavvlFVAPCILIVFSYVRIAMAVfqipsaKGRHKAFSTCSSHLTVVIL-----FYGTVLGIY 261
Cdd:cd15053 160 IYSSISS---------------FYIPCIVMLLLYYRIFRAL------RREKKATKTLAIVLGVFLFcwlpfFTLNILNAI 218
                       250       260       270
                ....*....|....*....|....*....|....*...
gi 47576087 262 IRPPDSFSTQDTVATIMYTV----VTPMLNPFIYSLRN 295
Cdd:cd15053 219 CPKLQNQSCHVGPALFSLTTwlgyVNSFLNPIIYTIFN 256
7tmA_alpha1D_AR cd15327
alpha-1 adrenergic receptors subtype D, member of the class A family of seven-transmembrane G ...
38-159 1.99e-07

alpha-1 adrenergic receptors subtype D, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-1 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that primarily mediate smooth muscle contraction: alpha-1A, alpha-1B, and alpha-1D. Activation of alpha-1 receptors by catecholamines such as norepinephrine and epinephrine couples to the G(q) protein, which then activates the phospholipase C pathway, leading to an increase in IP3 and calcium. Consequently, the elevation of intracellular calcium concentration leads to vasoconstriction in smooth muscle of blood vessels. In addition, activation of alpha-1 receptors by phenylpropanolamine (PPA) produces anorexia and may induce appetite suppression in rats.


Pssm-ID: 320450 [Multi-domain]  Cd Length: 261  Bit Score: 51.45  E-value: 1.99e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  38 LVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANVDTFLL 117
Cdd:cd15327  12 LMAIVGNILVILSVACNRHLQTVTNYFIVNLAIADLLLSTTVLPFSATLEVLGFWAFGRVFCDIWAAVDVLCCTASILSL 91
                        90       100       110       120
                ....*....|....*....|....*....|....*....|..
gi 47576087 118 AAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISL 159
Cdd:cd15327  92 CVISVDRYVGVKHSLKYPTIMTERKAGVILVLLWVSSMVISI 133
7tmA_tyramine_R-like cd15061
tyramine receptors and similar proteins, member of the class A family of seven-transmembrane G ...
28-223 2.64e-07

tyramine receptors and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes tyramine-specific receptors and similar proteins found in insects and other invertebrates. These tyramine receptors form a distinct receptor family that is phylogenetically different from the other tyramine/octopamine receptors which also found in invertebrates. Both octopamine and tyramine mediate their actions via G protein-coupled receptors (GPCRs) and are the invertebrate equivalent of vertebrate adrenergic neurotransmitters. In Drosophila, octopamine is involved in ovulation by mediating an egg release from the ovary, while a physiological role for tyramine in this process is not fully understood. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320189 [Multi-domain]  Cd Length: 256  Bit Score: 50.82  E-value: 2.64e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLI 107
Cdd:cd15061   1 ILISFLILAIIFTIFGNLLVILAVATTRRLRTITNCYIVSLATADLLVGVLVLPLAIIRQLLGYWPLGSHLCDFWISLDV 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 108 SFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFcssipeishfycdaylL 187
Cdd:cd15061  81 LLCTASILNLCCISLDRYFAITYPLKYRTKRSRRLAITMILAVWVISLLITSPPLVGPSWHGR----------------R 144
                       170       180       190
                ....*....|....*....|....*....|....*.
gi 47576087 188 MKLACSDTRINQLVFLGAVVLFVAPCILIVFSYVRI 223
Cdd:cd15061 145 GLGSCYYTYDKGYRIYSSMGSFFLPLLLMLFVYLRI 180
7tmA_PrRP_R cd15394
prolactin-releasing peptide receptor, member of the class A family of seven-transmembrane G ...
38-162 3.86e-07

prolactin-releasing peptide receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Prolactin-releasing peptide (PrRP) receptor (previously known as GPR10) is expressed in the central nervous system with the highest levels located in the anterior pituitary and is activated by its endogenous ligand PrRP, a neuropeptide possessing a C-terminal Arg-Phe-amide motif. There are two active isoforms of PrRP in mammals: one consists of 20 amino acids (PrRP-20) and the other consists of 31 amino acids (PrRP-31), where PrRP-20 is a C-terminal fragment of PrRP-31. Binding of PrRP to the receptor coupled to G(i/o) proteins activates the extracellular signal-related kinase (ERK) and it can also couple to G(q) protein leading to an increase in intracellular calcium and activation of c-Jun N-terminal protein kinase (JNK). The PrRP receptor shares significant sequence homology with the neuropeptide Y (NPY) receptor, and micromolar levels of NPY can bind and completely inhibit the PrRP-evoked intracellular calcium response in PrRP receptor-expressing cells, suggesting that the PrRP receptor shares a common ancestor with the NPY receptors. PrRP has been shown to reduce food intake and body weight and modify body temperature when administered in rats. It also has been shown to decrease circulating growth hormone levels by activating somatostatin-secreting neurons in the hypothalamic periventricular nucleus.


Pssm-ID: 320516 [Multi-domain]  Cd Length: 286  Bit Score: 50.51  E-value: 3.86e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  38 LVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPrLLASHVSGTEIISYAHCLTQMYFLISFANV--DTF 115
Cdd:cd15394  12 LVGVVGNYLLIYVICRTKKMHNVTNFLIGNLAFSDMLMCATCVP-LTLAYAFEPRGWVFGRFMCYFVFLMQPVTVyvSVF 90
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|
gi 47576087 116 LLAAMALDRFVAICYPLqyHTIITPQLCVGLAAVVWICSGLISL---VHT 162
Cdd:cd15394  91 TLTAIAVDRYYVTVYPL--RRRISRRTCAYIVAAIWLLSCGLALpaaAHT 138
7tmA_alpha1A_AR cd15325
alpha-1 adrenergic receptors subtype A, member of the class A family of seven-transmembrane G ...
41-159 5.34e-07

alpha-1 adrenergic receptors subtype A, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-1 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that primarily mediate smooth muscle contraction: alpha-1A, alpha-1B, and alpha-1D. Activation of alpha-1 receptors by catecholamines such as norepinephrine and epinephrine couples to the G(q) protein, which then activates the phospholipase C pathway, leading to an increase in IP3 and calcium. Consequently, the elevation of intracellular calcium concentration leads to vasoconstriction in smooth muscle of blood vessels. In addition, activation of alpha-1 receptors by phenylpropanolamine (PPA) produces anorexia and may induce appetite suppression in rats.


Pssm-ID: 320448 [Multi-domain]  Cd Length: 261  Bit Score: 49.89  E-value: 5.34e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  41 VAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANVDTFLLAAM 120
Cdd:cd15325  15 VLGNILVILSVACHRHLQTVTHYFIVNLAVADLLLTSTVLPFSAIFEILGYWAFGRVFCNIWAAVDVLCCTASIMSLCII 94
                        90       100       110
                ....*....|....*....|....*....|....*....
gi 47576087 121 ALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISL 159
Cdd:cd15325  95 SIDRYIGVSYPLRYPSIMTERRGLLALLCVWVLSLVISI 133
7tmA_alpha2_AR cd15059
alpha-2 adrenergic receptors, member of the class A family of seven-transmembrane G ...
38-223 6.56e-07

alpha-2 adrenergic receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-2 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that have a key role in neurotransmitter release: alpha-2A, alpha-2B, and alpha-2C. In addition, a fourth subtype, alpha-2D is present in ray-finned fishes and amphibians, but is not found in humans. The alpha-2 receptors are found in both central and peripheral nervous system and serve to produce inhibitory functions through the G(i) proteins. Thus, the alpha-2 receptors inhibit adenylate cyclase, which decreases cAMP production and thereby decreases calcium influx during the action potential. Consequently, lowered levels of calcium will lead to a decrease in neurotransmitter release by negative feedback. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320187 [Multi-domain]  Cd Length: 261  Bit Score: 49.65  E-value: 6.56e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  38 LVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANVDTFLL 117
Cdd:cd15059  12 LLIIVGNVLVIVAVLTSRKLRAPQNWFLVSLAVADILVGLLIMPFSLVNELMGYWYFGSVWCEIWLALDVLFCTASIVNL 91
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 118 AAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLvhtllmnrltfcssiPEIshFYCDAYLLMKLACSDTRI 197
Cdd:cd15059  92 CAISLDRYWSVTQAVEYNLKRTPRRAKAMIAAVWIISAVISL---------------PPL--FGWKDEQPWHGAEPQCEL 154
                       170       180
                ....*....|....*....|....*....
gi 47576087 198 NQL---VFLGAVVLFVAPCILIVFSYVRI 223
Cdd:cd15059 155 SDDpgyVLFSSIGSFYIPLLIMIIVYARI 183
7tmA_TACR cd15390
neurokinin receptors (or tachykinin receptors), member of the class A family of ...
29-159 7.12e-07

neurokinin receptors (or tachykinin receptors), member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents G-protein coupled receptors for a variety of neuropeptides of the tachykinin (TK) family. The tachykinins are widely distributed throughout the mammalian central and peripheral nervous systems and act as excitatory transmitters on neurons and cells in the gastrointestinal tract. The TKs are characterized by a common five-amino acid C-terminal sequence, Phe-X-Gly-Leu-Met-NH2, where X is a hydrophobic residue. The three major mammalian tachykinins are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB). The physiological actions of tachykinins are mediated through three types of receptors: neurokinin receptor type 1 (NK1R), NK2R, and NK3R. SP is a high-affinity endogenous ligand for NK1R, which interacts with the Gq protein and activates phospholipase C, leading to elevation of intracellular calcium. NK2R is a high-affinity receptor for NKA, the tachykinin neuropeptide substance K. SP and NKA are found in the enteric nervous system and mediate in the regulation of gastrointestinal motility, secretion, vascular permeability, and pain perception. NK3R is activated by its high-affinity ligand, NKB, which is primarily involved in the central nervous system and plays a critical role in the regulation of gonadotropin hormone release and the onset of puberty.


Pssm-ID: 320512 [Multi-domain]  Cd Length: 289  Bit Score: 49.60  E-value: 7.12e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  29 LFWA--FLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFL 106
Cdd:cd15390   1 VLWSivFVVMVLVAIGGNLIVIWIVLAHKRMRTVTNYFLVNLAVADLLISAFNTVFNFTYLLYNDWPFGLFYCKFSNFVA 80
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|...
gi 47576087 107 ISFANVDTFLLAAMALDRFVAICYPLQYHTiiTPQLCVGLAAVVWICSGLISL 159
Cdd:cd15390  81 ITTVAASVFTLMAISIDRYIAIVHPLRPRL--SRRTTKIAIAVIWLASFLLAL 131
7tmA_AstC_insect cd15094
somatostatin-like receptor for allatostatin C, member of the class A family of ...
29-159 7.16e-07

somatostatin-like receptor for allatostatin C, member of the class A family of seven-transmembrane G protein-coupled receptors; G protein-coupled somatostatin receptors (SSTRs) are composed of five distinct subtypes (SSTR1-5) that display strong sequence similarity with opioid receptors. All five receptor subtypes bind the natural somatostatin (somatotropin release inhibiting factor), a polypeptide hormone that regulates a wide variety of physiological functions such as neurotransmission, cell proliferation, contractility of smooth muscle cells, and endocrine signaling as well as inhibition of the release of many secondary hormones. In Drosophila melanogaster and other insects, a 15-amino-acid peptide named allatostatin C(AstC) binds the somatostatin-like receptors. Two AstC receptors have been identified in Drosophila with strong sequence homology to human somatostatin and opioid receptors.


Pssm-ID: 320222 [Multi-domain]  Cd Length: 282  Bit Score: 49.78  E-value: 7.16e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  29 LFWAFLCmyLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLiPRLLASHVSGTEIISYAHCltQMYFLIS 108
Cdd:cd15094   5 VLYGLIC--IVGLVGNGLVIYVVLRYAKMKTVTNLYILNLAVADECFLIGL-PFLIVTMILKYWPFGAAMC--KIYMVLT 79
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|...
gi 47576087 109 FANVDT--FLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISL 159
Cdd:cd15094  80 SINQFTssFTLTVMSADRYLAVCHPIRSMRYRTPFIAKVVCATTWSISFLVML 132
7tmA_Octopamine_R cd15063
octopamine receptors in invertebrates, member of the class A family of seven-transmembrane G ...
38-299 8.23e-07

octopamine receptors in invertebrates, member of the class A family of seven-transmembrane G protein-coupled receptors; G-protein coupled receptor for octopamine (OA), which functions as a neurotransmitter, neurohormone, and neuromodulator in invertebrate nervous system. Octopamine (also known as beta, 4-dihydroxyphenethylamine) is an endogenous trace amine that is highly similar to norepinephrine, but lacks a hydroxyl group, and has effects on the adrenergic and dopaminergic nervous systems. Based on the pharmacological and signaling profiles, the octopamine receptors can be classified into at least two groups: OA1 receptors elevate intracellular calcium levels in muscle, whereas OA2 receptors activate adenylate cyclase and increase cAMP production.


Pssm-ID: 320191 [Multi-domain]  Cd Length: 266  Bit Score: 49.42  E-value: 8.23e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  38 LVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANVDTFLL 117
Cdd:cd15063  12 VLVVLGNLLVIAAVLCSRKLRTVTNLFIVSLACADLLVGTLVLPFSAVNEVLDVWIFGHTWCQIWLAVDVWMCTASILNL 91
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 118 AAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNrltfcsSIPEISHFYCDAYLLmKLACSDTRI 197
Cdd:cd15063  92 CAISLDRYLAITRPIRYPSLMSTKRAKCLIAGVWVLSFVICFPPLVGWN------DGKDGIMDYSGSSSL-PCTCELTNG 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 198 NQLVFLGAVVLFVAPCILIVFSYVRIAMAvfqipsAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPdsfSTQDTVATI 277
Cdd:cd15063 165 RGYVIYSALGSFYIPMLVMLFFYFRIYRA------ARMETKAAKTVAIIVGCFIFCWLPFFTVYLVRA---FCEDCIPPL 235
                       250       260
                ....*....|....*....|....*...
gi 47576087 278 MYTVV------TPMLNPFIYSLRNKDMK 299
Cdd:cd15063 236 LFSVFfwlgycNSALNPCIYALFSRDFR 263
7tmA_Opsin_Gq_invertebrates cd15337
invertebrate Gq opsins, member of the class A family of seven-transmembrane G protein-coupled ...
38-228 8.35e-07

invertebrate Gq opsins, member of the class A family of seven-transmembrane G protein-coupled receptors; The invertebrate Gq-coupled opsin subfamily includes the arthropod and mollusc visual opsins. Like the vertebrate visual opsins, arthropods possess color vision by the use of multiple opsins sensitive to different light wavelengths. The invertebrate Gq opsins are closely related to the vertebrate melanopsins, the primary photoreceptor molecules for non-visual responses to light, and the R1-R6 photoreceptors, which are the fly equivalent to the vertebrate rods. The Gq opsins belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320459 [Multi-domain]  Cd Length: 292  Bit Score: 49.63  E-value: 8.35e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  38 LVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFT-TNLIPRLLASHVSGTEIISYAHCltQMYFLIS----FANV 112
Cdd:cd15337  12 ILGVIGNLLVIYLFSKTKSLRTPSNMFIINLAISDFGFSaVNGFPLKTISSFNKKWIWGKVAC--ELYGFAGgifgFMSI 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 113 DTflLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLvhtllMNRLTFCSSIPEISHFYCDAYLLMKLAC 192
Cdd:cd15337  90 TT--LAAISIDRYLVIAKPLEAMKKMTFKRAFIMIIIIWLWSLLWSI-----PPFFGWGRYVPEGFQTSCTFDYLSRDLN 162
                       170       180       190
                ....*....|....*....|....*....|....*.
gi 47576087 193 SDTRINQLVFLGavvlFVAPCILIVFSYVRIAMAVF 228
Cdd:cd15337 163 NRLFILGLFIFG----FLCPLLIIIFCYVNIIRAVR 194
7tmA_Opioid_R-like cd14970
opioid receptors and related proteins, member of the class A family of seven-transmembrane G ...
30-300 8.82e-07

opioid receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes opioid receptors, somatostatin receptors, melanin-concentrating hormone receptors (MCHRs), and neuropeptides B/W receptors. Together they constitute the opioid receptor-like family, members of the class A G-protein coupled receptors. Opioid receptors are coupled to inhibitory G proteins of the G(i/o) family and are involved in regulating a variety of physiological functions such as pain, addiction, mood, stress, epileptic seizure, and obesity, among many others. G protein-coupled somatostatin receptors (SSTRs), which display strong sequence similarity with opioid receptors, binds somatostatin (somatotropin release inhibiting factor), a polypeptide hormone that regulates a wide variety of physiological functions such as neurotransmission, cell proliferation, contractility of smooth muscle cells, and endocrine signaling as well as inhibition of the release of many secondary hormones. MCHR binds melanin concentrating hormone and is presumably involved in the neuronal regulation of food intake. Despite strong homology with somatostatin receptors, MCHR does not appear to bind somatostatin. Neuropeptides B/W receptors are primarily expressed in the CNS and stimulate the cortisol secretion by activating the adenylate cyclase- and the phospholipase C-dependent signaling pathways.


Pssm-ID: 320101 [Multi-domain]  Cd Length: 282  Bit Score: 49.60  E-value: 8.82e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  30 FWAFLCmyLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLiPRLLASHVSGTEIISYAHCLTQMYflISF 109
Cdd:cd14970   6 VYSVVC--VVGLTGNSLVIYVILRYSKMKTVTNIYILNLAVADELFLLGL-PFLATSYLLGYWPFGEVMCKIVLS--VDA 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 110 AN--VDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHtllmnrLTFCSSIPEISHFY-CdayL 186
Cdd:cd14970  81 YNmfTSIFCLTVMSVDRYLAVVHPVKSLRFRTPRKAKLVSLCVWALSLVLGLPV------IIFARTLQEEGGTIsC---N 151
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 187 LMKLACSDTRINQLVFLGAVVLFVAPCILIVFSYVRIAM---AVFQIPSAKGRHKAFST---CSSHLTVVILFYGTVLGI 260
Cdd:cd14970 152 LQWPDPPDYWGRVFTIYTFVLGFAVPLLVITVCYSLIIRrlrSSRNLSTSGAREKRRARrkvTRLVLVVVAVFVVCWLPF 231
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*....
gi 47576087 261 YI----RPPDSFSTQDTVATIMYTVVTPM-----LNPFIYSLRNKDMKQ 300
Cdd:cd14970 232 HVfqivRLLIDPPETLTVVGVFLFCIALSyanscLNPILYAFLDENFRK 280
7tmA_KiSS1R cd15095
KiSS1-derived peptide (kisspeptin) receptor, member of the class A family of ...
29-159 9.58e-07

KiSS1-derived peptide (kisspeptin) receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The G protein-coupled KiSS1-derived peptide receptor (GPR54 or kisspeptin receptor) binds the peptide hormone kisspeptin (previously known as metastin), which encoded by the metastasis suppressor gene (KISS1) expressed in various endocrine and reproductive tissues. The KiSS1 receptor is coupled to G proteins of the G(q/11) family, which lead to activation of phospholipase C and increase of intracellular calcium. This signaling cascade plays an important role in reproduction by regulating the secretion of gonadotropin-releasing hormone.


Pssm-ID: 320223 [Multi-domain]  Cd Length: 288  Bit Score: 49.20  E-value: 9.58e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  29 LFWAFLCmyLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLIS 108
Cdd:cd15095   5 LIFAIIF--LVGLAGNSLVIYVVSRHREMRTVTNYYIVNLAVTDLAFLVCCVPFTAALYATPSWVFGDFMCKFVNYMMQV 82
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|.
gi 47576087 109 FANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISL 159
Cdd:cd15095  83 TVQATCLTLTALSVDRYYAIVHPIRSLRFRTPRVAVVVSACIWIVSFLLSI 133
7tmA_TAAR5-like cd15317
trace amine-associated receptor 5 and similar receptors, member of the class A family of ...
28-223 1.03e-06

trace amine-associated receptor 5 and similar receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Included in this group are mammalian TAAR5, TAAR6, TAAR8, TAAR9, and similar proteins. They are among the 15 identified trace amine-associated receptors (TAARs), a distinct subfamily within the class A G protein-coupled receptors. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320440 [Multi-domain]  Cd Length: 290  Bit Score: 49.37  E-value: 1.03e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLI 107
Cdd:cd15317   2 IIYIVLVLAMLITVSGNLVVIISISHFKQLHSPTNMLVLSLATADFLLGLCVMPFSMIRTVETCWYFGDLFCKFHTGLDL 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 108 SFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVW----ICSGLISLVHTLLMNRLTFCSSIPEIShfycD 183
Cdd:cd15317  82 LLCTTSIFHLCFIAIDRYYAVCDPLRYPSKITVQVAWRFIAIGWlvpgIYTFGLIYTGANDEGLEEYSSEISCVG----G 157
                       170       180       190       200
                ....*....|....*....|....*....|....*....|
gi 47576087 184 AYLLmklacsdtrINQLVFLGAVVLFVAPCILIVFSYVRI 223
Cdd:cd15317 158 CQLL---------FNKIWVLLDFLTFFIPCLIMIGLYAKI 188
7tmA_Histamine_H2R cd15051
histamine subtype H2 receptor, member of the class A family of seven-transmembrane G ...
28-300 1.06e-06

histamine subtype H2 receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes histamine receptor subtype H2R, a member of histamine receptor family, which belongs to the class A of GPCRs. Histamine plays a key role as chemical mediator and neurotransmitter in various physiological and pathophysiological processes in the central and peripheral nervous system. Histamine exerts its functions by binding to four different G protein-coupled receptors (H1-H4). The H2R subtype selectively interacts with the G(s)-type G protein that activates adenylate cyclase, leading to increased cAMP production and activation of Protein Kinase A. H2R is found in various tissues such as the brain, stomach, and heart. Its most prominent role is in histamine-induced gastric acid secretion. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320179 [Multi-domain]  Cd Length: 287  Bit Score: 49.25  E-value: 1.06e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFL-CMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFL 106
Cdd:cd15051   1 IVLGVVLaVIILLTVIGNVLVCLAVAVNRRLRNLTNYFIVSLAVTDLLLGLLVLPFSAIYELRGEWPLGPVFCNIYISLD 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 107 ISFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVhTLLMNRLTFCSSIPEISHfycdayl 186
Cdd:cd15051  81 VMLCTASILNLFAISLDRYLAITAPLRYPSRVTPRRVAIALAAIWVVSLAVSFL-PIHLGWNTPDGRVQNGDT------- 152
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 187 lmKLACSDTRINQLVFLGAVVLFVAPCILIVFSYVRI---------AMAVFQIPSAKGRHKAFSTCSSHLTVVILfyGTV 257
Cdd:cd15051 153 --PNQCRFELNPPYVLLVAIGTFYLPLLIMCGVYLRIfriareqakRINALTPASTANSSKSAATAREHKATVTL--AAV 228
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 47576087 258 LGIYI---RPPDSFST-----QDTVATIMYTVVT------PMLNPFIYSLRNKDMKQ 300
Cdd:cd15051 229 LGAFIicwFPYFTYFTyrglcGDNINETALSVVLwlgyanSALNPILYAFLNRDFRR 285
7tmA_5-HT1F cd15334
serotonin receptor subtype 1F, member of the class A family of seven-transmembrane G ...
38-159 1.74e-06

serotonin receptor subtype 1F, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT1 receptors, one of 14 mammalian 5-HT receptors, is a member of the class A of GPCRs and is activated by the endogenous neurotransmitter and peripheral signal mediator serotonin (5-hydroxytryptamine, 5-HT). The 5-HT1 receptors mediate inhibitory neurotransmission by coupling to G proteins of the G(i/o) family, which lead to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels and calcium influx. The 5-HT1 receptor subfamily includes 5 subtypes: 5-HT1A, 5-HT1B, 5-HT1D, 5-HT1E, and 5-HT1F. There is no 5-HT1C receptor subtype, as it has been reclassified as the 5-HT2C receptor. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320456 [Multi-domain]  Cd Length: 259  Bit Score: 48.41  E-value: 1.74e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  38 LVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANVDTFLL 117
Cdd:cd15334  12 LMTTAINSLVITAIIVTRKLHHPANYLICSLAVTDFLVAVLVMPFSIMYIVKETWIMGQVVCDIWLSVDITCCTCSILHL 91
                        90       100       110       120
                ....*....|....*....|....*....|....*....|..
gi 47576087 118 AAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISL 159
Cdd:cd15334  92 SAIALDRYRAITDAVEYARKRTPKHAGIMIAVVWIISIFISM 133
7tmA_ETH-R cd14997
ecdysis-triggering hormone receptors, member of the class A family of seven-transmembrane G ...
37-224 2.08e-06

ecdysis-triggering hormone receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup represents the ecdysis-triggering hormone receptors found in insects, which are members of the class A family of seven-transmembrane G-protein coupled receptors. Ecdysis-triggering hormones are vital regulatory signals that govern the stereotypic physiological sequence leading to cuticle shedding in insects. Thus, the ETH signaling system has been a target for the design of more sophisticated insect-selective pest control strategies. Two subtypes of ecdysis-triggering hormone receptor were identified in Drosophila melanogaster. Blood-borne ecdysis-triggering hormone (ETH) activates the behavioral sequence through direct actions on the central nervous system. In insects, ecdysis is thought to be controlled by the interaction between peptide hormones; in particular between ecdysis-triggering hormone (ETH) from the periphery and eclosion hormone (EH) and crustacean cardioactive peptide (CCAP) from the central nervous system. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320128 [Multi-domain]  Cd Length: 294  Bit Score: 48.44  E-value: 2.08e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  37 YLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPR-LLASHVSGTEIISYAHCLTQMYFLISFANVDTF 115
Cdd:cd14997  11 FVVGVLGNVLVGIVVWKNKDMRTPTNIFLVNLSVADLLVLLVCMPVaLVETWAREPWLLGEFMCKLVPFVELTVAHASVL 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 116 LLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISL-----VHTLLMNRLT---FCSSIPEISHFYCDAYLL 187
Cdd:cd14997  91 TILAISFERYYAICHPLQAKYVCTKRRALVIIALIWLLALLTSSpvlfiTEFKEEDFNDgtpVAVCRTPADTFWKVAYIL 170
                       170       180       190
                ....*....|....*....|....*....|....*..
gi 47576087 188 MKlacsdtrinqlvflgAVVLFVAPCILIVFSYVRIA 224
Cdd:cd14997 171 ST---------------IVVFFVVPLAILSGLYSVIC 192
7tmA_5-HT2C cd15305
serotonin receptor subtype 2C, member of the class A family of seven-transmembrane G ...
34-220 2.41e-06

serotonin receptor subtype 2C, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341346 [Multi-domain]  Cd Length: 275  Bit Score: 47.98  E-value: 2.41e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  34 LCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIP-RLLASHVSGTEIISYAHCLTQMYFLISFANV 112
Cdd:cd15305   8 LIIIILTIGGNILVIMAVSLEKKLQNATNFFLMSLAVADMLVGILVMPvSLIAILYDYAWPLPRYLCPIWISLDVLFSTA 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 113 DTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLvhtllmnrltfcsSIPEIShFYCDAYLLMKLAC 192
Cdd:cd15305  88 SIMHLCAISLDRYVAIRNPIEHSRFNSRTKAMMKIAAVWTISIGISM-------------PIPVIG-LQDDEKVFVNGTC 153
                       170       180
                ....*....|....*....|....*...
gi 47576087 193 SDTRINqLVFLGAVVLFVAPCILIVFSY 220
Cdd:cd15305 154 VLNDEN-FVLIGSFVAFFIPLIIMVITY 180
7tmA_5-HT2 cd15052
serotonin receptor subtype 2, member of the class A family of seven-transmembrane G ...
28-159 2.41e-06

serotonin receptor subtype 2, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320180 [Multi-domain]  Cd Length: 262  Bit Score: 48.08  E-value: 2.41e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCmyLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIP-RLLASHVSGTEIISYAHCLTQMYFL 106
Cdd:cd15052   4 ALLLLLLV--IATIGGNILVCLAISLEKRLQNVTNYFLMSLAIADLLVGLLVMPlSILTELFGGVWPLPLVLCLLWVTLD 81
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|...
gi 47576087 107 ISFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISL 159
Cdd:cd15052  82 VLFCTASIMHLCTISLDRYMAIRYPLRTRRNKSRTTVFLKIAIVWLISIGISS 134
7tmA_Gal2_Gal3_R cd15097
galanin receptor subtypes 2 and 3, member of the class A family of seven-transmembrane G ...
33-158 2.85e-06

galanin receptor subtypes 2 and 3, member of the class A family of seven-transmembrane G protein-coupled receptors; The G protein-coupled galanin receptors bind galanin, a neuropeptide that is widely expressed in the brain, peripheral tissues, and endocrine glands. Three receptors subtypes have been so far identified: GAL1, GAL2, and GAL3. The specific functions of each subtype remains mostly unknown, although galanin is thought to be involved in a variety of neuronal functions such as hormone release and food intake. Galanin is implicated in numerous neurological and psychiatric diseases including Alzheimer's disease, depression, eating disorders, epilepsy and stroke, among many others.


Pssm-ID: 320225 [Multi-domain]  Cd Length: 279  Bit Score: 47.90  E-value: 2.85e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  33 FLCMYLVTVAGNTLIF-LAISSDPRLHTPMYFFLANLSFVDVCFTTNLIP-----RLLASHVSGTEIISYAHCLTqmyFL 106
Cdd:cd15097   7 FSLIFLLGTVGNSLVLaVLLRSGQSGHNTTNLFILNLSVADLCFILFCVPfqatiYSLEGWVFGSFLCKAVHFFI---YL 83
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|..
gi 47576087 107 ISFANvdTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLIS 158
Cdd:cd15097  84 TMYAS--SFTLAAVSVDRYLAIRYPLRSRELRTPRNAVAAIALIWGLSLLFA 133
7tmA_Beta2_AR cd15957
beta-2 adrenergic receptors (adrenoceptors), member of the class A family of ...
35-223 2.91e-06

beta-2 adrenergic receptors (adrenoceptors), member of the class A family of seven-transmembrane G protein-coupled receptors; Beta-2 AR is activated by adrenaline that plays important roles in cardiac function and pulmonary physiology. While beta-1 AR and beta-2 AR are the major subtypes involved in modulating cardiac contractility and heart rate by positively stimulating the G(s) protein-adenylate cyclase-cAMP-PKA signaling pathway, beta-2 AR can couple to both G(s) and G(i) proteins in the heart. Moreover, beta-2 AR activation leads to smooth muscle relaxation and bronchodilation in the lung. The beta adrenergic receptors are a subfamily of the class A rhodopsin-like G protein-coupled receptors.


Pssm-ID: 341355 [Multi-domain]  Cd Length: 301  Bit Score: 47.94  E-value: 2.91e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  35 CMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHC--LTQMYFLISFANV 112
Cdd:cd15957   9 LIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILLKTWTFGNFWCefWTSIDVLCVTASI 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 113 DTflLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLvhtLLMNRLTFCSSIPEISHFYCDAyllmklAC 192
Cdd:cd15957  89 ET--LCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSF---LPIQMHWYRATHQEAINCYAEE------TC 157
                       170       180       190
                ....*....|....*....|....*....|..
gi 47576087 193 SDTRINQ-LVFLGAVVLFVAPCILIVFSYVRI 223
Cdd:cd15957 158 CDFFTNQaYAIASSIVSFYVPLVIMVFVYSRV 189
7tmA_Adenosine_R_A3 cd15070
adenosine receptor subtype A3, member of the class A family of seven-transmembrane G ...
38-160 3.01e-06

adenosine receptor subtype A3, member of the class A family of seven-transmembrane G protein-coupled receptors; The A3 receptor, a member of the adenosine receptor family of G protein-coupled receptors, is coupled to G proteins of the inhibitory G(i) family, which lead to inhibition of adenylate cyclase and thereby lowering the intracellular cAMP levels. The A3 receptor has a sustained protective function in the heart during cardiac ischemia and contributes to inhibition of neutrophil degranulation in neutrophil-mediated tissue injury. Moreover, activation of A3 receptor by adenosine protects astrocytes from cell death induced by hypoxia.


Pssm-ID: 320198 [Multi-domain]  Cd Length: 280  Bit Score: 47.85  E-value: 3.01e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  38 LVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPrlLASHVSGTEIISYAHCLTQMYFLISFANVDTFLL 117
Cdd:cd15070  12 LCAVVGNVLVIWVVKLNPSLRTTTFYFIVSLALADIAVGVLVIP--LAIVVSLGVTIHFYSCLFMSCLLVVFTHASIMSL 89
                        90       100       110       120
                ....*....|....*....|....*....|....*....|...
gi 47576087 118 AAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLV 160
Cdd:cd15070  90 LAIAVDRYLRVKLTVRYRIVTTQRRIWLALGLCWLVSFLVGLT 132
7tmA_5-HT1_5_7 cd15064
serotonin receptor subtypes 1, 5 and 7, member of the class A family of seven-transmembrane G ...
36-301 3.19e-06

serotonin receptor subtypes 1, 5 and 7, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes serotonin receptor subtypes 1, 5, and 7 that are activated by the neurotransmitter serotonin. The 5-HT1 and 5-HT5 receptors mediate inhibitory neurotransmission by coupling to G proteins of the G(i/o) family. The 5-HT1 receptor subfamily includes 5-HT1A, 5-HT1B, 5-HT1D, 5-HT1E, and 5-HT1F. There is no 5-HT1C receptor subtype, as it has been reclassified as 5-HT2C receptor. The 5-HT5A and 5-HT5B receptors have been cloned from rat and mouse, but only the 5-HT5A isoform has been identified in human because of the presence of premature stop codons in the human 5-HT5B gene, which prevents a functional receptor from being expressed. The 5-HT7 receptor is coupled to Gs, which positively stimulates adenylate cyclase activity, leading to increased intracellular cAMP formation and calcium influx. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320192 [Multi-domain]  Cd Length: 258  Bit Score: 47.71  E-value: 3.19e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  36 MYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANVDTF 115
Cdd:cd15064  10 IILATILGNALVIAAILLTRKLHTPANYLIASLAVADLLVAVLVMPLSAVYELTGRWILGQVLCDIWISLDVTCCTASIL 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 116 LLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLvhTLLMNRLTFCSSIPeishfycdayllmklacSDT 195
Cdd:cd15064  90 HLCVIALDRYWAITDAVEYAHKRTPKRAAVMIALVWTLSICISL--PPLFGWRTPDSEDP-----------------SEC 150
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 196 RINQLV---FLGAVVLFVAPCILIVFSYVRIAMAvfqipsAKGRHKAFSTCSSHLTVVIL----FYGTVLgiyIRPpdsF 268
Cdd:cd15064 151 LISQDIgytIFSTFGAFYIPLLLMLILYWKIYRA------AARERKAAKTLGIILGAFIVcwlpFFLVAL---IVP---L 218
                       250       260       270
                ....*....|....*....|....*....|....*....
gi 47576087 269 STQDTVATIMYTVVT------PMLNPFIYSLRNKDMKQT 301
Cdd:cd15064 219 CSHCWIPLALKSFFLwlgyfnSLINPLIYTFFNKDFRKA 257
7tmA_V1bR cd15386
vasopressin receptor subtype 1B, member of the class A family of seven-transmembrane G ...
38-159 3.72e-06

vasopressin receptor subtype 1B, member of the class A family of seven-transmembrane G protein-coupled receptors; The V1b receptor is specifically expressed in corticotropes of the anterior pituitary and plays a critical role in regulating the activity of hypothalamic-pituitary-adrenal axis, a key part of the neuroendocrine system that controls reactions to stress, by maintaining adrenocorticotropic hormone (ACTH) and corticosterone levels. Vasopressin (also known as arginine vasopressin or anti-diuretic hormone) is synthesized in the hypothalamus and is released from the posterior pituitary gland. The actions of vasopressin are mediated by the interaction of this hormone with three receptor subtypes: V1aR, V1bR, and V2R. These subtypes are differ in localization, function, and signaling pathways. Activation of V1aR and V1bR stimulate phospholipase C, while activation of V2R stimulates adenylate cyclase. Although vasopressin and oxytocin differ only by two amino acids and stimulate the same cAMP/PKA pathway, they have divergent physiological functions. Vasopressin is involved in regulating blood pressure and the balance of water and sodium ions, whereas oxytocin plays an important role in the uterus during childbirth and in lactation.


Pssm-ID: 320508 [Multi-domain]  Cd Length: 302  Bit Score: 47.87  E-value: 3.72e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  38 LVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTT-NLIPRLL---ASHVSGTEIIsyahCLTQMYFLISFANVD 113
Cdd:cd15386  12 VVATAGNLAVLLAMYRMRRKMSRMHLFVLHLALTDLVVALfQVLPQLIweiTYRFQGPDLL----CRAVKYLQVLSMFAS 87
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*.
gi 47576087 114 TFLLAAMALDRFVAICYPLQYHTIITPQLCVgLAAVVWICSGLISL 159
Cdd:cd15386  88 TYMLIMMTVDRYIAVCHPLRTLQQPSRQAYL-MIGATWLLSCILSL 132
7tmA_GPR84-like cd15210
G protein-coupled receptor 84 and similar proteins, member of the class A family of ...
31-222 3.87e-06

G protein-coupled receptor 84 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR84, also known as the inflammation-related G-Protein coupled receptor EX33, is a receptor for medium-chain free fatty acid (FFA) with carbon chain lengths of C9 to C14. Among these medium-chain FFAs, capric acid (C10:0), undecanoic acid (C11:0), and lauric acid (C12:0) are the most potent endogenous agonists of GPR84, whereas short-chain and long-chain saturated and unsaturated FFAs do not activate this receptor. GPR84 contains a [G/N]RY-motif instead of the highly conserved Asp-Arg-Tyr (DRY) motif found in the third transmembrane helix (TM3) of the rhodopsin-like class A receptors and important for efficient G protein-coupled signal transduction. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, which then activate the heterotrimeric G proteins. In the case of GPR84, activation of the receptor couples to a pertussis toxin sensitive G(i/o)-protein pathway. GPR84 knockout mice showed increased Th2 cytokine production including IL-4, IL-5, and IL-13 compared to wild-type mice. It has been also shown that activation of GPR84 augments lipopolysaccharide-stimulated IL-8 production in polymorphonuclear leukocytes and TNF-alpha production in macrophages, suggesting that GPR84 may function as a proinflammatory receptor.


Pssm-ID: 320338 [Multi-domain]  Cd Length: 254  Bit Score: 47.26  E-value: 3.87e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  31 WAFLCMyLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFA 110
Cdd:cd15210   6 WGIVFM-VVGVPGNLLTVLALLRSKKLRTRTNAFIINLSISDLLFCAFNLPLAASTFLHQAWIHGETLCRVFPLLRYGLV 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 111 NVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISL------VHTLLMNRLTFCSSIPEISHFYCDA 184
Cdd:cd15210  85 AVSLLTLVLITLNRYILIAHPSLYPRIYTRRGLALMIAGTWIFSFGSFLplwlgiWGRFGLDPKVCSCSILRDKKGRSPK 164
                       170       180       190
                ....*....|....*....|....*....|....*...
gi 47576087 185 YLLMKLAcsdtrinqlvflgavvlFVAPCILIVFSYVR 222
Cdd:cd15210 165 TFLFVFG-----------------FVLPCLVIIICYAR 185
7tmA_MC5R cd15354
melanocortin receptor subtype 5, member of the class A family of seven-transmembrane G ...
33-151 3.98e-06

melanocortin receptor subtype 5, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320476 [Multi-domain]  Cd Length: 270  Bit Score: 47.24  E-value: 3.98e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  33 FLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHvsgteIISYAHCLTQMYFLISFANV 112
Cdd:cd15354   7 FLTLGIISLLENILVILAIVKNKNLHSPMYFFVCSLAVADMLVSVSNAWETITIY-----LLNNRHLVIEDAFVRHIDNV 81
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|
gi 47576087 113 -DTFL----------LAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVW 151
Cdd:cd15354  82 fDSLIcisvvasmcsLLAIAVDRYVTIFYALRYHNIMTVRRAGIIIACIW 131
7tmA_TAAR1 cd15314
trace amine-associated receptor 1 and similar receptors, member of the class A family of ...
28-164 4.68e-06

trace amine-associated receptor 1 and similar receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The trace amine-associated receptor 1 (TAAR1) is one of the 15 identified trace amine-associated receptor subtypes, which form a distinct subfamily within the class A G protein-coupled receptor family. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. TAAR1 is coupled to the Gs protein, which leads to activation of adenylate cyclase, and is thought to play functional role in the regulation of brain monoamines. TAAR1 is also shown to be activated by psychoactive compounds such as Ecstasy (MDMA), amphetamine and LSD. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320438 [Multi-domain]  Cd Length: 282  Bit Score: 47.24  E-value: 4.68e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLI 107
Cdd:cd15314   2 LLYIFLGLISLVTVCGNLLVIISIAHFKQLHTPTNYLILSLAVADLLVGGLVMPPSMVRSVETCWYFGDLFCKIHSSFDI 81
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 47576087 108 SFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLL 164
Cdd:cd15314  82 TLCTASILNLCFISIDRYYAVCQPLLYRSKITVRVVLVMILISWSVSALVGFGIIFL 138
7tmA_MC2R_ACTH_R cd15350
melanocortin receptor subtype 2, also called adrenocorticotropic hormone receptor, member of ...
33-156 5.58e-06

melanocortin receptor subtype 2, also called adrenocorticotropic hormone receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320472 [Multi-domain]  Cd Length: 270  Bit Score: 47.08  E-value: 5.58e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  33 FLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLI-----------PRLLASHVSGTEIISYAHCLT 101
Cdd:cd15350   7 FFTIAAVGLLENLLVLVAVIKNKNLHSPMYFFICSLAVSDMLGSLYKTleniliiladmGYLNRRGPFETKLDDIMDSLF 86
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 47576087 102 QMYFLISFanvdtFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVW-ICSGL 156
Cdd:cd15350  87 CLSLLGSI-----FSILAIAADRYITIFHALRYHNIMTMRRTLVILAIIWtFCGGS 137
7tmA_MC4R cd15353
melanocortin receptor subtype 4, member of the class A family of seven-transmembrane G ...
33-151 5.67e-06

melanocortin receptor subtype 4, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320475 [Multi-domain]  Cd Length: 269  Bit Score: 46.83  E-value: 5.67e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  33 FLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTN-----LIPRLLASHVSGTE--IISYAHCLTQMYF 105
Cdd:cd15353   7 FVTLGIVSLLENILVIAAIAKNKNLHSPMYFFICSLAVADMLVSVSngsetVVITLLNGNDTDAQsfTVNIDNVIDSVIC 86
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*.
gi 47576087 106 LISFANVDTFLlaAMALDRFVAICYPLQYHTIITPQLCVGLAAVVW 151
Cdd:cd15353  87 SSLLASICSLL--SIAVDRYFTIFYALQYHNIMTVRRAGVIITCIW 130
7tmA_D1-like_dopamine_R cd15057
D1-like family of dopamine receptors, member of the class A family of seven-transmembrane G ...
38-160 5.68e-06

D1-like family of dopamine receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Dopamine receptors are members of the class A G protein-coupled receptors that are involved in many neurological processes in the central nervous system (CNS). The neurotransmitter dopamine is the primary endogenous agonist for dopamine receptors. Dopamine receptors consist of at least five subtypes: D1, D2, D3, D4, and D5. The D1 and D5 subtypes are members of the D1-like family of dopamine receptors, whereas the D2, D3 and D4 subtypes are members of the D2-like family. The D1-like family receptors are coupled to G proteins of the G(s) family, which activate adenylate cyclase, causing cAMP formation and activation of protein kinase A. In contrast, activation of D2-like family receptors is linked to G proteins of the G(i) family, which inhibit adenylate cyclase. Dopamine receptors are major therapeutic targets for neurological and psychiatric disorders such as drug abuse, depression, schizophrenia, or Parkinson's disease. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320185 [Multi-domain]  Cd Length: 299  Bit Score: 47.04  E-value: 5.68e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  38 LVTVAGNTLIFLAISSDPRLHTPMY-FFLANLSFVDVCFTTNLIPRLLASHVSGTEIISyAHCLTQMYFLISFANVDTFL 116
Cdd:cd15057  12 LLTLLGNALVIAAVLRFRHLRSKVTnYFIVSLAVSDLLVAILVMPWAAVNEVAGYWPFG-SFCDVWVSFDIMCSTASILN 90
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....
gi 47576087 117 LAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLV 160
Cdd:cd15057  91 LCVISVDRYWAISSPFRYERRMTRRRAFIMIAVAWTLSALISFI 134
7tmA_TAAR2_3_4 cd15312
trace amine-associated receptors 2, 3, 4, and similar receptors, member of the class A family ...
36-158 5.91e-06

trace amine-associated receptors 2, 3, 4, and similar receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; TAAR2, TAAR3, and TAAR4 are among the 15 identified trace amine-associated receptor subtypes, which form a distinct subfamily within the class A G protein-coupled receptor family. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320437 [Multi-domain]  Cd Length: 289  Bit Score: 46.96  E-value: 5.91e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  36 MYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANVDTF 115
Cdd:cd15312  10 AILLTVFGNLMVIISISHFKQLHSPTNFLILSLAITDFLLGFLVMPYSMVRSVESCWYFGDLFCKIHSSLDMMLSTTSIF 89
                        90       100       110       120
                ....*....|....*....|....*....|....*....|...
gi 47576087 116 LLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLIS 158
Cdd:cd15312  90 HLCFIAVDRYYAVCDPLHYRTKITTPVIKVFLVISWSVPCLFA 132
7tmA_S1PR cd15102
sphingosine-1-phosphate receptors, member of the class A family of seven-transmembrane G ...
41-302 8.90e-06

sphingosine-1-phosphate receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The endothelial differentiation gene (Edg) family of G-protein coupled receptors binds blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). The Edg receptors couple and activate at least three different G protein subtypes including G(i/o), G(q/11), and G(12/13).


Pssm-ID: 320230 [Multi-domain]  Cd Length: 270  Bit Score: 46.31  E-value: 8.90e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  41 VAGNTLIFLAISSDPRLHTPMYFFLANLSFVD----VCFTTNLiprLLASHVsgTEIISYAHCLTQMYFLISFANVDTFL 116
Cdd:cd15102  15 VLENLLVLIAIWRHMKFHRPMYYFLGNLALSDllagAAYLANI---LLSGAR--TLRLSPAQWFLREGSMFVALSASVFS 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 117 LAAMALDRFVAICYPLQYHTIITPQLcVGLAAVVWICSGLISLVHTLLMNRLTFCSSIPEISHFYCDAYLLMKLAcsdtr 196
Cdd:cd15102  90 LLAIAIERHLTMAKMKPYGASKTSRV-LLLIGACWLISLLLGGLPILGWNCLGALDACSTVLPLYSKHYVLFCVT----- 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 197 INQLVFLGAVVLFVApciliVFSYVRIAMAVFQIPSAKGRHKA-FSTCSSHLTVVILFYGTVLGI-------------YI 262
Cdd:cd15102 164 IFAGILAAIVALYAR-----IYCLVRASGRKATRASASPRSLAlLKTVLIVLLVFIACWGPLFILllldvacpvktcpIL 238
                       250       260       270       280
                ....*....|....*....|....*....|....*....|
gi 47576087 263 RPPDSFstqdtvatIMYTVVTPMLNPFIYSLRNKDMKQTV 302
Cdd:cd15102 239 YKADWF--------LALAVLNSALNPIIYTLRSRELRRAV 270
7tmA_GPR61_GPR62-like cd15220
G protein-coupled receptors 61 and 62, member of the class A family of seven-transmembrane G ...
32-160 1.11e-05

G protein-coupled receptors 61 and 62, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes the orphan receptors GPR61 and GPR62, which are both constitutively active and predominantly expressed in the brain. While GPR61 couples to G(s) subtype of G proteins, the signaling pathway and function of GPR 62 are unknown. GPR61-deficient mice displayed significant hyperphagia and heavier body weight compared to wild-type mice, suggesting that GPR61 is involved in the regulation of food intake and body weight. GPR61 transcript expression was found in the caudate, putamen, and thalamus of human brain, whereas GPR62 transcript expression was found in the basal forebrain, frontal cortex, caudate, putamen, thalamus, and hippocampus. Both receptors share the highest sequence homology with each other and comprise a conserved subgroup within the class A family of GPCRs, which includes receptors for hormones, neurotransmitters, sensory stimuli, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, which then activate the heterotrimeric G proteins. Members of this subgroup contain [A/E]RY motif, a variant of the highly conserved Asp-Arg-Tyr (DRY) motif found in the third transmembrane helix (TM3) of the class A GPCRs and important for efficient G protein-coupled signal transduction.


Pssm-ID: 410633 [Multi-domain]  Cd Length: 264  Bit Score: 45.90  E-value: 1.11e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  32 AFLCMYLVT---VAGNTLIFLAISSDPRLHTpmYFFLANLSFVDVCFTTNLIP--RLLASHVSGTEIISYAHCLTQMYFL 106
Cdd:cd15220   2 GLFCMVLLDltaLVGNTAVMVVIAKTPHLRK--FAFVCHLCVVDLLAALLLMPlgILSSSPFFLGVVFGEAECRVYIFLS 79
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....
gi 47576087 107 ISFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLV 160
Cdd:cd15220  80 VCLVSASILTISAISVERYYYIVHPMRYEVKMTIGLVAAVLVGVWVKALLLGLL 133
7tmA_purinoceptor-like cd14982
purinoceptor and its related proteins, member of the class A family of seven-transmembrane G ...
32-254 1.34e-05

purinoceptor and its related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; Members of this subfamily include lysophosphatidic acid receptor, P2 purinoceptor, protease-activated receptor, platelet-activating factor receptor, Epstein-Barr virus induced gene 2, proton-sensing G protein-coupled receptors, GPR35, and GPR55, among others. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341318 [Multi-domain]  Cd Length: 283  Bit Score: 45.72  E-value: 1.34e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  32 AFLCMYLVTVA----GNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHC-LTQMYFL 106
Cdd:cd14982   2 LFPIVYSLIFIlgllGNILALWVFLRKMKKRSPTTIYMINLALADLLFVLTLPFRIYYYLNGGWWPFGDFLCrLTGLLFY 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 107 ISFAnVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLvhTLLMNRLTfcsSIPEISHFYCDAYL 186
Cdd:cd14982  82 INMY-GSILFLTCISVDRYLAVVHPLKSRRLRRKRYAVGVCAGVWILVLVASV--PLLLLRST---IAKENNSTTCFEFL 155
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 47576087 187 LMKLAcsdtRINQLVFLGAVVLFVAPCILIVFSYVRIAMAVFQIPSAKG----RHKAFSTCSSHLTVVILFY 254
Cdd:cd14982 156 SEWLA----SAAPIVLIALVVGFLIPLLIILVCYSLIIRALRRRSKQSQksvrKRKALRMILIVLAVFLVCF 223
7tmA_Proton-sensing_R cd15160
proton-sensing G protein-coupled receptors, member of the class A family of ...
104-302 1.60e-05

proton-sensing G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Proton/pH-sensing G-protein coupled receptors sense pH of 7.6 to 6.0. They mediate a variety of biological activities in neutral and mildly acidic pH conditions, whereas the acid-sensing ionotropic ion channels typically sense strong acidic pH. The proton/pH-sensing receptor family includes the G2 accumulation receptor (G2A, also known as GPR132), the T cell death associated gene-8 (TDAG8, GPR65) receptor, ovarian cancer G-protein receptor 1 (OGR-1, GPR68), and G-protein-coupled receptor 4 (GPR4).


Pssm-ID: 320288 [Multi-domain]  Cd Length: 280  Bit Score: 45.45  E-value: 1.60e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 104 YFLISFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWIcsgLISLVHTLLMNRLTFCSSIPEISHFYcD 183
Cdd:cd15160  78 FFFYTNIYASIGFLCCIAVDRYLAVVHPLRFRGLRTRRFALKVSASIWV---LELGTHSVFLGHDELFRDEPNHTLCY-E 153
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 184 AYLLmklacsDTRINQLVFLGAVVLFVAPCILIVFSYVRIAMAVFQIPS------AKGRHKAFSTCSSHLTV-----VIL 252
Cdd:cd15160 154 KYPM------EGWQASYNYARFLVGFLIPLSLILFFYRRVLRAVRQSPSlereekRKIIGLLLSIVVIFLLCflpyhVVL 227
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|...
gi 47576087 253 FYGTVLGIYIRPPDSFSTQDTVA---TIMYTVVTPMLNPFIYSLRNKDMKQTV 302
Cdd:cd15160 228 LVRSVIELVQNGLCGFEKRVFTAyqiSLCLTSLNCVADPILYIFVTEDVRQDL 280
7tmA_5-HT1B_1D cd15333
serotonin receptor subtypes 1B and 1D, member of the class A family of seven-transmembrane G ...
38-300 2.23e-05

serotonin receptor subtypes 1B and 1D, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT1 receptors, one of 14 mammalian 5-HT receptors, is a member of the class A of GPCRs and is activated by the endogenous neurotransmitter and peripheral signal mediator serotonin (5-hydroxytryptamine, 5-HT). The 5-HT1 receptors mediate inhibitory neurotransmission by coupling to G proteins of the G(i/o) family, which lead to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels and calcium influx. The 5-HT1 receptor subfamily includes 5 subtypes: 5-HT1A, 5-HT1B, 5-HT1D, 5-HT1E, and 5-HT1F. There is no 5-HT1C receptor subtype, as it has been reclassified as the 5-HT2C receptor. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320455 [Multi-domain]  Cd Length: 265  Bit Score: 45.17  E-value: 2.23e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  38 LVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANVDTFLL 117
Cdd:cd15333  16 LATTLSNAFVIATIYLTRKLHTPANYLIASLAVTDLLVSILVMPISIVYTVTGTWTLGQVVCDIWLSSDITCCTASILHL 95
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 118 AAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSglislvhtllmnrltFCSSIPEISHFYCDAYLLMKLACSDTRI 197
Cdd:cd15333  96 CVIALDRYWAITDAVEYSKKRTPKRAAVMIALVWVIS---------------ISISLPPFFWRQAKAEEEVSECVVNTDH 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 198 NQLVFLGAVVLFVAPCILIVFSYVRIAMAvfqipsAKGRHK-----------AFSTCSSHLTVVILFYGTVLGIYIRPPD 266
Cdd:cd15333 161 ILYTVYSTVGAFYIPTLLLIALYGRIYVE------ARARERkatktlgiilgAFIVCWLPFFIISLVLPICKDACWFHLA 234
                       250       260       270
                ....*....|....*....|....*....|....
gi 47576087 267 SFstqdTVATIMYTVVTPmLNPFIYSLRNKDMKQ 300
Cdd:cd15333 235 IF----DFFTWLGYLNSL-INPIIYTMSNEDFKQ 263
7tmA_Mel1A cd15402
melatonin receptor subtype 1A, member of the class A family of seven-transmembrane G ...
38-230 3.84e-05

melatonin receptor subtype 1A, member of the class A family of seven-transmembrane G protein-coupled receptors; Melatonin (N-acetyl-5-methoxytryptamine) is a naturally occurring sleep-promoting chemical found in vertebrates, invertebrates, bacteria, fungi, and plants. In mammals, melatonin is secreted by the pineal gland and is involved in regulation of circadian rhythms. Its production peaks during the nighttime, and is suppressed by light. Melatonin is shown to be synthesized in other organs and cells of many vertebrates, including the Harderian gland, leukocytes, skin, and the gastrointestinal (GI) tract, which contains several hundred times more melatonin than the pineal gland and is involved in the regulation of GI motility, inflammation, and sensation. Melatonin exerts its pleiotropic physiological effects through specific membrane receptors, named MT1A, MT1B, and MT1C, which belong to the class A rhodopsin-like G-protein coupled receptor family. MT1A and MT1B subtypes are present in mammals, whereas MT1C subtype has been found in amphibians and birds. The melatonin receptors couple to G proteins of the G(i/o) class, leading to the inhibition of adenylate cyclase.


Pssm-ID: 320524 [Multi-domain]  Cd Length: 279  Bit Score: 44.51  E-value: 3.84e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  38 LVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANVDTFLL 117
Cdd:cd15402  12 VVDILGNLLVILSVYRNKKLRNAGNIFVVSLAVADLVVAIYPYPLVLTSIFHNGWNLGYLHCQISGFLMGLSVIGSIFNI 91
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 118 AAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSgLISLVHTLLMNRLTFCSSIpeishfycdayllmkLACSDTRI 197
Cdd:cd15402  92 TGIAINRYCYICHSLKYDKLYSDKNSLCYVLLIWVLT-VAAIVPNLFVGSLQYDPRI---------------YSCTFAQS 155
                       170       180       190
                ....*....|....*....|....*....|....*
gi 47576087 198 NQLVFLGAVVLF--VAPCILIVFSYVRIAMAVFQI 230
Cdd:cd15402 156 VSSAYTIAVVFFhfILPIIIVTFCYLRIWILVIQV 190
7tmA_GPR6 cd15962
G protein-coupled receptor 6, member of the class A family of seven-transmembrane G ...
34-302 4.23e-05

G protein-coupled receptor 6, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR3, GPR6, and GPR12 form a subfamily of constitutively active G-protein coupled receptors with dual coupling to G(s) and G(i) proteins. These three orphan receptors are involved in the regulation of cell proliferation and survival, neurite outgrowth, cell clustering, and maintenance of meiotic prophase arrest. They constitutively activate adenylate cyclase to a similar degree as that seen with fully activated G(s)-coupled receptors, and are also able to constitutively activate inhibitory G(i/o) proteins. Lysophospholipids such as sphingosine 1-phosphate (S1P) and sphingosylphosphorylcholine have been detected as the high-affinity ligands for Gpr6 and Gpr12, respectively, which show high sequence homology with GPR3.


Pssm-ID: 320628 [Multi-domain]  Cd Length: 268  Bit Score: 44.15  E-value: 4.23e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  34 LCMYLVTVAG-NTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYahcLTQMYFLISFANV 112
Cdd:cd15962   7 LCISGTVIACeNAIVVAIIFYTPTLRTPMFVLIGSLATADLLAGCGLILNFVFQYVIQSETISL---ITVGFLVASFTAS 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 113 DTFLLaAMALDRFVAICYPLQYHTIITPQLCVGLAAVVW---ICSGLISLVHTLLMNRLTFCSSIPEISHfycdayllmk 189
Cdd:cd15962  84 VSSLL-AITVDRYLSLYNALTYYSEKTVLGVHLMLAATWgvsLCLGLLPVLGWNCLEERASCSIVRPLTK---------- 152
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 190 lacsdtriNQLVFLGAVVLFVApcILIVFSYVRIAMAVFQIPSAKGRHKAFSTCS---------SHLTVVILFYGTV--- 257
Cdd:cd15962 153 --------SNVTLLSASFFFIF--ILMLHLYIKICKIVCRHAHQIALQQHFLTAShyvatkkgvSTLAIILGTFGASwlp 222
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*.
gi 47576087 258 LGIYIRPPDS-FSTQDTVATIMYTVVTPMLNPFIYSLRNKDMKQTV 302
Cdd:cd15962 223 FAIYCVVGDHeYPAVYTYATLLPATYNSMINPIIYAYRNQEIQRSM 268
7tmA_CB2 cd15341
cannabinoid receptor subtype 2, member of the class A family of seven-transmembrane G ...
29-299 5.36e-05

cannabinoid receptor subtype 2, member of the class A family of seven-transmembrane G protein-coupled receptors; Cannabinoid receptors belong to the class A G-protein coupled receptor superfamily. Two types of cannabinoid receptors, CB1 and CB2, have been identified so far. They are activated by naturally occurring endocannabinoids, cannabis plant-derived cannabinoids such as tetrahydrocannabinol, or synthetic cannabinoids. The CB receptors are involved in the various physiological processes such as appetite, mood, memory, and pain sensation. CB1 receptor is expressed predominantly in central and peripheral neurons, while CB2 receptor is found mainly in the immune system.


Pssm-ID: 320463 [Multi-domain]  Cd Length: 279  Bit Score: 44.06  E-value: 5.36e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  29 LFWAFLC--MYLVTVAGNTLIFLAISSDPRLH-TPMYFFLANLSFVDVCFTTNLIPRLLASHVsgteiisYAHCLTQMYF 105
Cdd:cd15341   1 IAIAVLCtlCGLLCILENVAVLYLILSSPKLRrKPSYLFIGSLALADFLASVVFACSFVDFHV-------FHGVDSSAIF 73
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 106 LISFANVDTFLLAA------MALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSIPEISH 179
Cdd:cd15341  74 LLKLGGVTMSFTASlgslllMAFDRYVCIYYPSEYKALVTRKRALVALAVMWVLTALIAYLPLMGWNCCPLNSPCSELFP 153
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 180 FYCDAYLlmklacsdtrinqlvfLGAVVLFVAPCILIVFSYVRI---------AMAVFQIPSAKGRHKA------FSTCS 244
Cdd:cd15341 154 LIPNDYL----------------LSWLLLVAILLSGIIYTYGHVlwkahkhvvYMEKHQDQQGPGNARMrldvrlAKTLG 217
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 245 SHLTVVILFYGTVLGIYIRPPdSFSTQDTVATI-----MYTVVTPMLNPFIYSLRNKDMK 299
Cdd:cd15341 218 LVLAVLLICWSPVLALMMHSL-FTSLSDHIKKAfafcsTLCLVNSMVNPIIYALRSRELR 276
7tmA_GHSR-like cd15928
growth hormone secretagogue receptor, motilin receptor, and related proteins, member of the ...
34-154 5.46e-05

growth hormone secretagogue receptor, motilin receptor, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes growth hormone secretagogue receptor (GHSR or ghrelin receptor), motilin receptor (also called GPR38), and related proteins. Both GHSR and GPR38 bind peptide hormones. Ghrelin, the endogenous ligand for GHSR, is an acylated 28-amino acid peptide hormone produced by ghrelin cells in the gastrointestinal tract. Ghrelin is also called the hunger hormone and is involved in the regulation of growth hormone release, appetite and feeding, gut motility, lipid and glucose metabolism, and energy balance. Motilin, the ligand for GPR38, is a 22 amino acid peptide hormone expressed throughout the gastrointestinal tract and stimulates contraction of gut smooth muscle. It is involved in the regulation of digestive tract motility.


Pssm-ID: 320594 [Multi-domain]  Cd Length: 288  Bit Score: 44.02  E-value: 5.46e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  34 LCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANVD 113
Cdd:cd15928   8 SVLMLVGASGNLLTVLVIGRSRDMRTTTNLYLSSLAVSDLLIFLVLPLDLYRLWRYRPWRFGDLLCRLMYFFSETCTYAS 87
                        90       100       110       120
                ....*....|....*....|....*....|....*....|.
gi 47576087 114 TFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICS 154
Cdd:cd15928  88 ILHITALSVERYLAICHPLRAKVLVTRGRVKLLIAVIWAVA 128
7tmA_SREB3_GPR173 cd15217
super conserved receptor expressed in brain 3 (or GPR173), member of the class A family of ...
39-154 6.17e-05

super conserved receptor expressed in brain 3 (or GPR173), member of the class A family of seven-transmembrane G protein-coupled receptors; The SREB (super conserved receptor expressed in brain) subfamily consists of at least three members, named SREB1 (GPR27), SREB2 (GPR85), and SREB3 (GPR173). They are very highly conserved G protein-coupled receptors throughout vertebrate evolution, however no endogenous ligands have yet been identified. SREB2 is greatly expressed in brain regions involved in psychiatric disorders and cognition, such as the hippocampal dentate gyrus. Genetic studies in both humans and mice have shown that SREB2 influences brain size and negatively regulates hippocampal adult neurogenesis and neurogenesis-dependent cognitive function, all of which are suggesting a potential link between SREB2 and schizophrenia. All three SREB genes are highly expressed in differentiated hippocampal neural stem cells. Furthermore, all GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320345 [Multi-domain]  Cd Length: 329  Bit Score: 44.17  E-value: 6.17e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  39 VTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTE-IISYAHCLTQMYFLISFANVDTFLL 117
Cdd:cd15217  13 VSLAGNLIVSLLVLKDRALHKAPYYFLLDLCLADTIRSAVCFPFVLVSIRNGSAwTYSVLSCKIVAFMAVLFCFHAAFML 92
                        90       100       110
                ....*....|....*....|....*....|....*..
gi 47576087 118 AAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICS 154
Cdd:cd15217  93 FCISVTRYMAIAHHRFYSKRMTFWTCIAVICMVWTLS 129
7tmA_5-HT4 cd15056
serotonin receptor subtype 4, member of the class A family of seven-transmembrane G ...
28-226 7.24e-05

serotonin receptor subtype 4, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT4 subtype is a member of the serotonin receptor family that belongs to the class A G protein-coupled receptors, and binds the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the mammalian central nervous system (CNS). 5-HT4 receptors are selectively linked to G proteins of the G(s) family, which positively stimulate adenylate cyclase, causing cAMP formation and activation of protein kinase A. 5-HT4 receptor-specific agonists have been shown to enhance learning and memory in animal studies. Moreover, hippocampal 5-HT4 receptor expression has been reported to be inversely correlated with memory performance in humans. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320184 [Multi-domain]  Cd Length: 294  Bit Score: 43.63  E-value: 7.24e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFL-CMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFL 106
Cdd:cd15056   1 VVLSTFLsLVILLTILGNLLVIVAVCTDRQLRKKTNYFVVSLAVADLLVAVLVMPFGAIELVNNRWIYGETFCLVRTSLD 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 107 ISFANVDTFLLAAMALDRFVAICYPLqYHTIITPQLCVGLAAVVWICSGLISLVHtlLMNRLTFCSSIPEISHFYCdayl 186
Cdd:cd15056  81 VLLTTASIMHLCCIALDRYYAICCQP-LVYKMTPLRVAVMLGGCWVIPTFISFLP--IMQGWNHIGIEDLIAFNCA---- 153
                       170       180       190       200
                ....*....|....*....|....*....|....*....|
gi 47576087 187 LMKLACSDTRINQLVFLGAVVLFVAPCILIVFSYVRIAMA 226
Cdd:cd15056 154 SGSTSCVFMVNKPFAIICSTVAFYIPALLMVLAYYRIYVA 193
7tmA_TAAR5 cd15318
trace amine-associated receptor 5, member of the class A family of seven-transmembrane G ...
38-154 8.18e-05

trace amine-associated receptor 5, member of the class A family of seven-transmembrane G protein-coupled receptors; The trace amine-associated receptor 5 is one of the 15 identified amine-activated G protein-coupled receptors (TAARs), a distinct subfamily within the class A G protein-coupled receptors. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320441 [Multi-domain]  Cd Length: 282  Bit Score: 43.31  E-value: 8.18e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  38 LVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANVDTFLL 117
Cdd:cd15318  12 LIIVLGNLFVVVTVSHFKALHTPTNFLLLSLALADMLLGLTVLPFSTIRSVESCWYFGDSFCRLHTCLDTLFCLTSIFHL 91
                        90       100       110
                ....*....|....*....|....*....|....*..
gi 47576087 118 AAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICS 154
Cdd:cd15318  92 CFISIDRHCAICDPLLYPSKFTIRVACIFIAAGWLVP 128
7tmA_GPR35_55-like cd15923
G protein-coupled receptor 35, GPR55, and similar proteins, member of the class A family of ...
36-263 1.00e-04

G protein-coupled receptor 35, GPR55, and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily is composed of GPR35, GPR55, and similar proteins. GPR35 shares closest homology with GPR55, and they belong to the class A G protein-coupled receptor superfamily, which all have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A number of studies have suggested that GPR35 may play important physiological roles in hypertension, atherosclerosis, nociception, asthma, glucose homeostasis and diabetes, and inflammatory bowel disease. GPR35 is thought to be responsible for brachydactyly mental retardation syndrome, which is associated with a deletion comprising chromosome 2q37 in human, and is also implicated as a potential oncogene in stomach cancer. GPR35 couples to G(13) and G(i/o) proteins, whereas GPR55 has been reported to couple to G(13), G(12), or G(q) proteins. Activation of GPR55 leads to activation of phospholipase C, RhoA, ROCK, ERK, p38MAPK, and calcium release. Recently, lysophosphatidylinositol (LPI) has been identified as an endogenous ligand for GPR55, while several endogenous ligands for GPR35 have been identified including kynurenic acid, 2-oleoyl lysophosphatidic acid, and zaprinast.


Pssm-ID: 320589 [Multi-domain]  Cd Length: 273  Bit Score: 43.21  E-value: 1.00e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  36 MYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANVdtF 115
Cdd:cd15923  10 TFVLGLLLNILALWVFCWRLKKWTETNIYMTNLAVADLLLLISLPFKMHSYRRESAGLQKLCNFVLSLYYINMYVSI--F 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 116 LLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWI----CSGLISLVHTLLMNRLTFCSSipeishfycdayllmkla 191
Cdd:cd15923  88 TITAISVDRYVAIRYPLRARELRSPRKAAVVCAVIWVlvvtISIPYFLLDSSNEKTMCFQRT------------------ 149
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 47576087 192 cSDTRINQLVFLGAVVLFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTC-----SSHLTVVILFYGTVLGIYIR 263
Cdd:cd15923 150 -KQTESLKVFLLLEIFGFLLPLIIMTFCSARVIHTLQKRLDDVGSRSETKQCirvimANLIVFIVCFLPVHVGFFVK 225
7tmA_Histamine_H1R cd15050
histamine subtype H1 receptor, member of the class A family of seven-transmembrane G ...
38-301 1.04e-04

histamine subtype H1 receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes histamine receptor subtype H1R, a member of histamine receptor family, which belongs to the class A of GPCRs. Histamine plays a key role as chemical mediator and neurotransmitter in various physiological and pathophysiological processes in the central and peripheral nervous system. Histamine exerts its functions by binding to four different G protein-coupled receptors (H1-H4). H1R selectively interacts with the G(q)-type G protein that activates phospholipase C and the phosphatidylinositol pathway. Antihistamines, a widely used anti-allergy medication, act on the H1 subtype and produce drowsiness as a side effect. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320178 [Multi-domain]  Cd Length: 263  Bit Score: 43.19  E-value: 1.04e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  38 LVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLT--QMYFLISFANVdtF 115
Cdd:cd15050  12 LITVILNLLVLYAVRTERKLHTVGNLYIVSLSVADLIVGAVVMPLNIVYLLESKWILGRPVCLFwlSMDYVASTASI--F 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 116 LLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSglISLVHTLLMNRLTFCSSIPEISHFYCDAYLlmklacsdT 195
Cdd:cd15050  90 SLFILCIDRYRSVQQPLKYLKYRTKTRASLMISGAWLLS--FLWVIPILGWHHFARGGERVVLEDKCETDF--------H 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 196 RINQLVFLGAVVLFVAPCILIVFSYVRIAMAVFQIPSAKGR----HKAFSTCssHLTVVILFYGTVLGIYIRPPDSFstq 271
Cdd:cd15050 160 DVTWFKVLTAILNFYIPSLLMLWFYAKIFKAVNRERKAAKQlgfiMAAFILC--WIPYFILFMVIAFCKNCCNENLH--- 234
                       250       260       270
                ....*....|....*....|....*....|
gi 47576087 272 dtVATIMYTVVTPMLNPFIYSLRNKDMKQT 301
Cdd:cd15050 235 --MFTIWLGYINSTLNPFIYPLCNENFKKT 262
7tmA_Mel1 cd15209
melatonin receptor 1, member of the class A family of seven-transmembrane G protein-coupled ...
29-230 1.07e-04

melatonin receptor 1, member of the class A family of seven-transmembrane G protein-coupled receptors; Melatonin (N-acetyl-5-methoxytryptamine) is a naturally occurring sleep-promoting chemical found in vertebrates, invertebrates, bacteria, fungi, and plants. In mammals, melatonin is secreted by the pineal gland and is involved in regulation of circadian rhythms. Its production peaks during the nighttime, and is suppressed by light. Melatonin is shown to be synthesized in other organs and cells of many vertebrates, including the Harderian gland, leukocytes, skin, and the gastrointestinal (GI) tract, which contains several hundred times more melatonin than the pineal gland and is involved in the regulation of GI motility, inflammation, and sensation. Melatonin exerts its pleiotropic physiological effects through specific membrane receptors, named MT1A, MT1B, and MT1C, which belong to the class A rhodopsin-like G-protein coupled receptor family. MT1A and MT1B subtypes are present in mammals, whereas MT1C subtype has been found in amphibians and birds. The melatonin receptors couple to G proteins of the G(i/o) class, leading to the inhibition of adenylate cyclase.


Pssm-ID: 320337 [Multi-domain]  Cd Length: 279  Bit Score: 43.23  E-value: 1.07e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  29 LFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCltQMYFLIS 108
Cdd:cd15209   3 LACVLIVTIVVDVLGNLLVILSVLRNKKLRNAGNIFVVSLSVADLVVAIYPYPLILHAIFHNGWTLGQLHC--QASGFIM 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 109 FANV--DTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSgLISLVHTLLMNRLTFCSSIpeishfycdayl 186
Cdd:cd15209  81 GLSVigSIFNITAIAINRYCYICHSLQYDRLYSLRNTCCYLCLTWLLT-VLAVLPNFFIGSLQYDPRI------------ 147
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*.
gi 47576087 187 lmkLACSDTRINQLVFLGAVVL--FVAPCILIVFSYVRIAMAVFQI 230
Cdd:cd15209 148 ---YSCTFAQTVSTVYTITVVVihFLLPLLIVSFCYLRIWVLVLQV 190
7tmA_TRH-R cd14995
thyrotropin-releasing hormone receptor, member of the class A family of seven-transmembrane G ...
28-152 1.09e-04

thyrotropin-releasing hormone receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; TRH-R is a member of the class A rhodopsin-like G protein-coupled receptors, which binds the tripeptide thyrotropin releasing hormone. The TRH-R activates phosphoinositide metabolism through a pertussis-toxin-insensitive G-protein, the G(q)/G(11) class. TRH stimulates the synthesis and release of thyroid-stimulating hormone in the anterior pituitary. TRH is produced in many other tissues, especially within the nervous system, where it appears to act as a neurotransmitter/neuromodulator. It also stimulates the synthesis and release of prolactin. In the CNS, TRH stimulates a number of behavioral and pharmacological actions, including increased turnover of catecholamines in the nucleus accumbens. There are two thyrotropin-releasing hormone receptors in some mammals, thyrotropin-releasing hormone receptor 1 (TRH1) which has been found in a number of species including rat, mouse, and human and thyrotropin-releasing hormone receptor 2 (TRH2) which has, only been found in rodents. These TRH receptors are found in high levels in the anterior pituitary, and are also found in the retina and in certain areas of the brain.


Pssm-ID: 320126 [Multi-domain]  Cd Length: 269  Bit Score: 43.14  E-value: 1.09e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCmyLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVD-VCFTTNLIPRLLAS-HVSGTEIISYAHCLTQMYF 105
Cdd:cd14995   4 TFLVLLIC--GVGIVGNIMVVLVVLRTRHMRTPTNCYLVSLAVADlMVLVAAGLPNEIESlLGPDSWIYGYAGCLLITYL 81
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*..
gi 47576087 106 LISFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWI 152
Cdd:cd14995  82 QYLGINASSLSITAFTIERYIAICHPMKAQFICTVSRAKKIICFVWI 128
7tmA_GnRHR-like cd15195
gonadotropin-releasing hormone and adipokinetic hormone receptors, member of the class A ...
36-297 1.14e-04

gonadotropin-releasing hormone and adipokinetic hormone receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Gonadotropin-releasing hormone (GnRH) and adipokinetic hormone (AKH) receptors share strong sequence homology to each other, suggesting that they have a common evolutionary origin. GnRHR, also known as luteinizing hormone releasing hormone receptor (LHRHR), plays an central role in vertebrate reproductive function; its activation by binding to GnRH leads to the release of follicle stimulating hormone (FSH) and luteinizing hormone (LH) from the pituitary gland. Adipokinetic hormone (AKH) is a lipid-mobilizing hormone that is involved in control of insect metabolism. Generally, AKH behaves as a typical stress hormone by mobilizing lipids, carbohydrates and/or certain amino acids such as proline. Thus, it utilizes the body's energy reserves to fight the immediate stress problems and subdue processes that are less important. Although AKH is known to responsible for regulating the energy metabolism during insect flying, it is also found in insects that have lost its functional wings and predominantly walk for their locomotion. Both GnRH and AKH receptors are members of the class A of the seven-transmembrane, G-protein coupled receptor (GPCR) superfamily.


Pssm-ID: 320323 [Multi-domain]  Cd Length: 293  Bit Score: 43.16  E-value: 1.14e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  36 MYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTqMYFLISFA-NVDT 114
Cdd:cd15195  10 LFVISAAGNLTVLIQLFRRRRAKSHIQILIMHLALADLMVTFFNMPMDAVWNYTVEWLAGDLMCRV-MMFLKQFGmYLSS 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 115 FLLAAMALDRFVAICYPLQYHTiiTPQLCVGLAAVVWICSGLISLVHTLLMNRLtfcSSIPEISHFYcdayllmklACSD 194
Cdd:cd15195  89 FMLVVIALDRVFAILSPLSANQ--ARKRVKIMLTVAWVLSALCSIPQSFIFSVL---RKMPEQPGFH---------QCVD 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 195 TRINQ-------LVFLGAVVLFVAPCILIVFSYVRIAMAVFQIP-----SAKGRHKAFSTCS--------SHLTVVIL-- 252
Cdd:cd15195 155 FGSAPtkkqerlYYFFTMILSFVIPLIITVTCYLLILFEISKMAkrardTPISNRRRSRTNSlerarmrtLRMTALIVlt 234
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....
gi 47576087 253 -------FYGTVLGIYIRPPDSFSTQDTVATIMYTVVT--PMLNPFIYSLRNKD 297
Cdd:cd15195 235 fivcwgpYYVLGLWYWFDKESIKNLPPALSHIMFLLGYlnPCLHPIIYGVFMKE 288
7tmA_5-HT2A cd15304
serotonin receptor subtype 2A, member of the class A family of seven-transmembrane G ...
38-220 1.16e-04

serotonin receptor subtype 2A, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341345 [Multi-domain]  Cd Length: 267  Bit Score: 43.00  E-value: 1.16e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  38 LVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEI-ISYAHCLTQMYFLISFANVDTFL 116
Cdd:cd15304  12 ILTIAGNILVIMAVSLEKKLQNATNYFLMSLAIADMLLGFLVMPVSMLTILYGYRWpLPSKLCAVWIYLDVLFSTASIMH 91
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 117 LAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLvhtllmnrltfcsSIPeISHFYCDAYLLMKLACSDTR 196
Cdd:cd15304  92 LCAISLDRYIAIRNPIHHSRFNSRTKAFLKIIAVWTISVGISM-------------PIP-VFGLQDDSKVFKEGSCLLAD 157
                       170       180
                ....*....|....*....|....
gi 47576087 197 iNQLVFLGAVVLFVAPCILIVFSY 220
Cdd:cd15304 158 -ENFVLIGSFVAFFIPLTIMVITY 180
7tmA_GPR3_GPR6_GPR12-like cd15100
G protein-coupled receptors 3, 6, 12, and related proteins, member of the class A family of ...
34-168 1.31e-04

G protein-coupled receptors 3, 6, 12, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR3, GPR6, and GPR12 form a subfamily of constitutively active G-protein coupled receptors with dual coupling to G(s) and G(i) proteins. These three orphan receptors are involved in the regulation of cell proliferation and survival, neurite outgrowth, cell clustering, and maintenance of meiotic prophase arrest. They constitutively activate adenylate cyclase to a similar degree as that seen with fully activated G(s)-coupled receptors, and are also able to constitutively activate inhibitory G(i/o) proteins. Lysophospholipids such as sphingosine 1-phosphate (S1P) and sphingosylphosphorylcholine have been detected as the high-affinity ligands for Gpr6 and Gpr12, respectively, which show high sequence homology with GPR3. Also included in this subfamily is GPRx, also known as GPR185, which involved in the maintenance of meiotic arrest in frog oocytes.


Pssm-ID: 320228 [Multi-domain]  Cd Length: 268  Bit Score: 42.85  E-value: 1.31e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  34 LCMYLVTVAG-NTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISyahcLTQMYFLISFANV 112
Cdd:cd15100   7 LCVSGTLIACeNAIVVAIIFSTPSLRAPMFLLIGSLALADLLAGLGLILHFVFRYCVYSEALS----LVSVGLLVAAFSA 82
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 47576087 113 DTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRL 168
Cdd:cd15100  83 SVCSLLAITVDRYLSLYNALTYYSERTLTFTYVMLALLWTLALGLGLLPVLGWNCL 138
7tmA_EBI2 cd15159
Epstein-Barr virus (EBV)-induced gene 2, member of the class A family of seven-transmembrane G ...
28-253 1.57e-04

Epstein-Barr virus (EBV)-induced gene 2, member of the class A family of seven-transmembrane G protein-coupled receptors; Epstein-Barr virus-induced G-protein coupled receptor 2 (EBI2), also called GPR183, is activated by 7alpha, 25-dihydroxyxcholesterol (7alpha, 25-OHC), an oxysterol. EBI2 was originally identified as one of major genes induced in the Burkitt's lymphoma cell line BL41by EBV infection. EBI2 is involved in regulating B cell migration and responses, and is also implicated in human diseases such as type I diabetes, multiple sclerosis, and cancers.


Pssm-ID: 320287 [Multi-domain]  Cd Length: 286  Bit Score: 42.72  E-value: 1.57e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCMYLV-TVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHC-LTQMYF 105
Cdd:cd15159   1 VLLPLFYSLILVfGLLGNTLALHVICQKRKKINSTTLYLINLAVSDILFTLALPGRIAYYALGFDWPFGDWLCrLTALLF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 106 LI-SFANVdtFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLvhTLLMNRLTFcssiPEISHFYCda 184
Cdd:cd15159  81 YInTYAGV--NFMTCLSVDRYIAVVHPLRRHRLRKVKVVRYICVFVWVLVFLQTL--PLLFMPMTK----EMGGRITC-- 150
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 47576087 185 yllMKLACSDTRIN-QLVFLGAVVL-FVAPCILIVFSYVRIAMAVFQI------PSAKGRHKafSTCSSHLTVVILF 253
Cdd:cd15159 151 ---MEYPNFEKIKRlPLILLGACVIgFGVPVGIILFCYSQITLKLCRTakenplTEKSGHHK--KACNVILLVLLVF 222
7tmA_TACR_family cd14992
tachykinin receptor and closely related proteins, member of the class A family of ...
38-223 1.85e-04

tachykinin receptor and closely related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes G-protein coupled receptors for a variety of neuropeptides of the tachykinin (TK) family as well as closely related receptors. The tachykinins are widely distributed throughout the mammalian central and peripheral nervous systems and act as excitatory transmitters on neurons and cells in the gastrointestinal tract. The TKs are characterized by a common five-amino acid C-terminal sequence, Phe-X-Gly-Leu-Met-NH2, where X is a hydrophobic residue. The three major mammalian tachykinins are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB). The physiological actions of tachykinins are mediated through three types of receptors: neurokinin receptor type 1 (NK1R), NK2R, and NK3R. SP is a high-affinity endogenous ligand for NK1R, which interacts with the Gq protein and activates phospholipase C, leading to elevation of intracellular calcium. NK2R is a high-affinity receptor for NKA, the tachykinin neuropeptide substance K. SP and NKA are found in the enteric nervous system and mediate in the regulation of gastrointestinal motility, secretion, vascular permeability, and pain perception. NK3R is activated by its high-affinity ligand, NKB, which is primarily involved in the central nervous system and plays a critical role in the regulation of gonadotropin hormone release and the onset of puberty.


Pssm-ID: 320123 [Multi-domain]  Cd Length: 291  Bit Score: 42.42  E-value: 1.85e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  38 LVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANVDTFLL 117
Cdd:cd14992  12 LVSVVGNFIVIAALARHKNLRGATNYFIASLAISDLLMALFCTPFNFTYVVSLSWEYGHFLCKIVNYLRTVSVYASSLTL 91
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 118 AAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSIPEISHFYCDayllMKLACSDTRI 197
Cdd:cd14992  92 TAIAFDRYFAIIHPLKPRHRQSYTTTVIIIITIWVVSLLLAIPQLYYATTEVLFSVKNQEKIFCCQ----IPPVDNKTYE 167
                       170       180
                ....*....|....*....|....*.
gi 47576087 198 NQLVFLGAVVLFVAPCILIVFSYVRI 223
Cdd:cd14992 168 KVYFLLIFVVIFVLPLIVMTLAYARI 193
7tmA_D1A_dopamine_R cd15320
D1A (or D1) subtype dopamine receptor, member of the class A family of seven-transmembrane G ...
27-223 1.95e-04

D1A (or D1) subtype dopamine receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Dopamine receptors are members of the class A G protein-coupled receptors that are involved in many neurological processes in the central nervous system (CNS). The neurotransmitter dopamine is the primary endogenous agonist for dopamine receptors. Dopamine receptors consist of at least five subtypes: D1, D2, D3, D4, and D5. The D1 and D5 subtypes are members of the D1-like family of dopamine receptors, whereas the D2, D3 and D4 subtypes are members of the D2-like family. The D1-like family receptors are coupled to G proteins of the G(s) family, which activate adenylate cyclase, causing cAMP formation and activation of protein kinase A. Dopamine receptors are major therapeutic targets for neurological and psychiatric disorders such as drug abuse, depression, schizophrenia, or Parkinson's disease.


Pssm-ID: 320443 [Multi-domain]  Cd Length: 319  Bit Score: 42.30  E-value: 1.95e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  27 QILFWAFLC-MYLVTVAGNTLIFLAISSDPRLHTPMY-FFLANLSFVDVCFTTNLIPRLLASHVSGTEIISyAHCLTQMY 104
Cdd:cd15320   1 RVLTGCFLSvLILSTLLGNTLVCAAVIRFRHLRSKVTnFFVISLAVSDLLVAVLVMPWKAVAEIAGFWPFG-SFCNIWVA 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 105 FLISFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLL-------MNRLTFCSSIPEI 177
Cdd:cd15320  80 FDIMCSTASILNLCVISVDRYWAISSPFRYERKMTPKVAFIMISVAWTLSVLISFIPVQLnwhkakpTSFLDLNASLRDL 159
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*.
gi 47576087 178 SHFYCDAYLLMKLACSDTRINqlvflgavvlFVAPCILIVFSYVRI 223
Cdd:cd15320 160 TMDNCDSSLNRTYAISSSLIS----------FYIPVAIMIVTYTRI 195
7tmA_GPR101 cd15215
orphan G protein-coupled receptor 101, member of the class A family of seven-transmembrane G ...
28-158 2.08e-04

orphan G protein-coupled receptor 101, member of the class A family of seven-transmembrane G protein-coupled receptors; Gpr101, an orphan GPCR, is predominantly expressed in the brain within discrete nuclei and is predicted to couple to the stimulatory G(s) protein, a potent activator of adenylate cyclase. GPR101 has been implicated in mediating the actions of GnRH-(1-5), a pentapeptide formed by metallopeptidase cleavage of the decapeptide gonadotropin-releasing hormone (GnRH), which plays a critical role in the regulation of the hypothalamic-pituitary-gonadal axis. GnRH-(1-5) acts on GPR101 to stimulate epidermal growth factor (EFG) release and EFG-receptor (EGFR) phosphorylation, leading to enhanced cell migration and invasion in the Ishikawa endometrial cancer cell line. Furthermore, these effects of GnRH-(1-5) are also dependent on enzymatic activation of matrix metallopeptidase-9 (MMP-9). GPR101 is a member of the class A family of GPCRs, which includes receptors for hormones, neurotransmitters, sensory stimuli, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320343 [Multi-domain]  Cd Length: 261  Bit Score: 42.14  E-value: 2.08e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCMYLVtvaGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHC--LTQMYF 105
Cdd:cd15215   4 VLIVIFLCASLF---GNIVLLLVFQRKPQLLQVANRFIFNLLVADLLQTVLVMPWVIATSVPLFWPLDSHLCtaLVVLMH 80
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|...
gi 47576087 106 LISFANVDTFLLaaMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLIS 158
Cdd:cd15215  81 LFAFAGVNTIVV--VSVDRYLAIIHPLSYPTKMTPRRGYLLIYGTWIVSVLQS 131
7tmA_GPR15 cd15194
G protein-coupled receptor 15, member of the class A family of seven-transmembrane G ...
36-224 2.17e-04

G protein-coupled receptor 15, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR15, also called as Brother of Bonzo (BOB), is an orphan G-protein coupled receptor that was originally identified as a co-receptor for human immunodeficiency virus. GPR15 is upregulated in patients with rheumatoid arthritis and shares high sequence homology with angiotensin II type AT1 and AT2 receptors; however, its endogenous ligand is unknown. GPR15 controls homing of T cells, especially FOXP3(+) regulatory T cells, to the large intestine mucosa and thereby mediates local immune homeostasis. Moreover, GRP15-deficient mice were shown to be prone to develop more severe large intestine inflammation.


Pssm-ID: 320322 [Multi-domain]  Cd Length: 281  Bit Score: 42.15  E-value: 2.17e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  36 MYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANVDTF 115
Cdd:cd15194  10 VFLVGAVGNAILMGALVFKRGVRRLIDIFISNLAASDFIFLVTLPLWVDKEVVLGPWRSGSFLCKGSSYIISVNMYCSVF 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 116 LLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLvHTLLMNRLTFCSSIPeishfYCDAyllmKLACSDT 195
Cdd:cd15194  90 LLTCMSLDRYLAIVLPLVSRKFRTKHNAKVCCTCVWMLSCLLGL-PTLLSRELKKYEEKE-----YCNE----DAGTPSK 159
                       170       180
                ....*....|....*....|....*....
gi 47576087 196 RINQLVFLgaVVLFVAPCILIVFSYVRIA 224
Cdd:cd15194 160 VIFSLVSL--IVAFFLPLLSILTCYCTII 186
7tmA_SKR_NK2R cd16004
substance-K receptor, member of the class A family of seven-transmembrane G protein-coupled ...
32-133 2.36e-04

substance-K receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The substance-K receptor (SKR), also known as tachykinin receptor 2 (TACR2) or neurokinin A receptor or NK2R, is a G-protein coupled receptor that specifically binds to neurokinin A. The tachykinins are widely distributed throughout the mammalian central and peripheral nervous systems and act as excitatory transmitters on neurons and cells in the gastrointestinal tract. The TKs are characterized by a common five-amino acid C-terminal sequence, Phe-X-Gly-Leu-Met-NH2, where X is a hydrophobic residue. The three major mammalian tachykinins are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB). The physiological actions of tachykinins are mediated through three types of receptors: neurokinin receptor type 1 (NK1R), NK2R, and NK3R. SP is a high-affinity endogenous ligand for NK1R, which interacts with the Gq protein and activates phospholipase C, leading to elevation of intracellular calcium. NK2R is a high-affinity receptor for NKA, the tachykinin neuropeptide substance K. SP and NKA are found in the enteric nervous system and mediate the regulation of gastrointestinal motility, secretion, vascular permeability, and pain perception.


Pssm-ID: 320670 [Multi-domain]  Cd Length: 285  Bit Score: 42.14  E-value: 2.36e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  32 AFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTT--NLIPRLLASHvsGTEIISYAHCLTQMYFLISF 109
Cdd:cd16004   6 AYSLIVLVAVTGNATVIWIILAHRRMRTVTNYFIVNLALADLSMAAfnTAFNFVYASH--NDWYFGLEFCRFQNFFPITA 83
                        90       100
                ....*....|....*....|....
gi 47576087 110 ANVDTFLLAAMALDRFVAICYPLQ 133
Cdd:cd16004  84 MFVSIYSMTAIAADRYMAIIHPFK 107
7tmA_Adenosine_R_A1 cd15071
adenosine receptor subtype A1, member of the class A family of seven-transmembrane G ...
38-168 2.46e-04

adenosine receptor subtype A1, member of the class A family of seven-transmembrane G protein-coupled receptors; The adenosine A1 receptor, a member of the adenosine receptor family of G protein-coupled receptors, binds adenosine as its endogenous ligand. The A1 receptor has primarily inhibitory function on the tissues in which it is located. The A1 receptor slows metabolic activity in the brain and has a strong anti-adrenergic effects in the heart. Thus, it antagonizes beta1-adrenergic receptor-induced stimulation and thereby reduces cardiac contractility. The A1 receptor preferentially couples to G proteins of the G(i/o) family, which lead to inhibition of adenylate cyclase and thereby lowering the intracellular cAMP levels.


Pssm-ID: 341323 [Multi-domain]  Cd Length: 290  Bit Score: 42.14  E-value: 2.46e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  38 LVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPrlLASHVSGTEIISYAHCLTQMYFLISFANVDTFLL 117
Cdd:cd15071  12 LVSVPGNVLVIWAVKVNQALRDATFCFIVSLAVADVAVGALVIP--LAIIINIGPQTEFYSCLMVACPVLILTQSSILAL 89
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|.
gi 47576087 118 AAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRL 168
Cdd:cd15071  90 LAIAVDRYLRVKIPTRYKSVVTPRRAAVAIAGCWILSFLVGLTPMFGWNNL 140
7tmA_GPBAR1 cd15905
G protein-coupled bile acid receptor 1, member of the class A family of seven-transmembrane G ...
29-151 2.61e-04

G protein-coupled bile acid receptor 1, member of the class A family of seven-transmembrane G protein-coupled receptors; The G-protein coupled bile acid receptor GPBAR1 is also known as BG37, TGR5 (Takeda G-protein-coupled receptor 5), M-BAR (membrane-type receptor for bile acids), and GPR131. GPBAR1 is highly expressed in the gastrointestinal tract, but also found at many other tissues including liver, colon, heart, skeletal muscle, and brown adipose tissue. GPBAR1 functions as a membrane-bound receptor specific for bile acids, which are the end products of cholesterol metabolism that facilitate digestion and absorption of lipids or fat-soluble vitamins. Bile acids act as liver-specific metabolic signaling molecules and stimulate liver regeneration by activating GPBAR1 and nuclear receptors such as the farnesoid X receptor (FXR). Upon bile acids binding, GPBAR1 activation causes release of the G-alpha(s) subunit and activation of adenylate cyclase. The increase in intracellular cAMP level then stimulates the expression of many genes via the PKA-mediated phosphorylation of cAMP-response element binding protein (CREB). Thus, GPAR1-signalling exerts various biological effects in immune cells, liver, and metabolic tissues. For example, GPBAR1 activation leads to enhanced energy expenditure in brown adipose tissue and skeletal muscle; stimulation of glucagon-like peptide-1 (GLP-1) production in enteroendocrine L-cells; and inhibition of pro-inflammatory cytokine production in macrophages and attenuation of atherosclerosis development. GPBAR1 is a member of the class A rhodopsin-like family of GPCRs, which comprises receptors for hormones, neurotransmitters, sensory stimuli, and a variety of other ligands.


Pssm-ID: 320571 [Multi-domain]  Cd Length: 272  Bit Score: 42.05  E-value: 2.61e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  29 LFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNL--IPRLLASHVSGTEIISYAHCLTQMYFL 106
Cdd:cd15905   1 IFWLSVPLSSLIIFANLFIILGIACNRKLHNTANYFFLSLLLADLLTGVALpfIPGMSNESRRGYHSCLFVYVAPNFLFL 80
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*.
gi 47576087 107 ISFANvdtflLAAMALDRFVAICYPLQYHTIITPQlCVGLA-AVVW 151
Cdd:cd15905  81 SFLAN-----LLMVHYERYLCIVYPLQYHNFWVHR-WVPLAlLLTW 120
7tmA_Peropsin cd15073
retinal pigment epithelium-derived rhodopsin homolog, member of the class A family of ...
43-232 2.64e-04

retinal pigment epithelium-derived rhodopsin homolog, member of the class A family of seven-transmembrane G protein-coupled receptors; Peropsin, also known as a retinal pigment epithelium-derived rhodopsin homolog (RRH), is a visual pigment-like protein found exclusively in the apical microvilli of the retinal pigment epithelium. Peropsin belongs to the type 2 opsin family of the class A G-protein coupled receptors. Peropsin presumably plays a physiological role in the retinal pigment epithelium either by detecting light directly or monitoring the levels of retinoids, the primary light absorber in visual perception, or other pigment-related compounds in the eye.


Pssm-ID: 320201 [Multi-domain]  Cd Length: 280  Bit Score: 42.03  E-value: 2.64e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  43 GNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANVDTFLLAAMAL 122
Cdd:cd15073  17 SNGIVLVTFVKFRELRTPTNALIINLAVTDLGVSIIGYPFSAASDLHGSWKFGYAGCQWYAFLNIFFGMASIGLLTVVAV 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 123 DRFVAICYPLQYHTIITPQLCVgLAAVVWICSGLISlvhtlLMNRLTFCSSIPEISHFYCDayllMKLACSDTRINQLVF 202
Cdd:cd15073  97 DRYLTICRPDLGRKMTTNTYTV-MILLAWTNAFFWA-----AMPLVGWASYALDPTGATCT----INWRKNDSSFVSYTM 166
                       170       180       190
                ....*....|....*....|....*....|
gi 47576087 203 LGAVVLFVAPCILIVFSYVRIAMAVFQIPS 232
Cdd:cd15073 167 SVIVVNFIVPLAVMFYCYYNVSRFVKKVLA 196
7tmA_Gal1_R cd15098
galanin receptor subtype 1, member of the class A family of seven-transmembrane G ...
33-171 2.80e-04

galanin receptor subtype 1, member of the class A family of seven-transmembrane G protein-coupled receptors; The G protein-coupled galanin receptors bind galanin, a neuropeptide that is widely expressed in the brain, peripheral tissues, and endocrine glands. Three receptors subtypes have been so far identified: GAL1, GAL2, and GAL3. The specific functions of each subtype remains mostly unknown, although galanin is thought to be involved in a variety of neuronal functions such as hormone release and food intake. Galanin is implicated in numerous neurological and psychiatric diseases including Alzheimer's disease, depression, eating disorders, epilepsy and stroke, among many others.


Pssm-ID: 320226 [Multi-domain]  Cd Length: 282  Bit Score: 42.02  E-value: 2.80e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  33 FLCMYLVTVAGNTLIF--LAISSDPRLHTPMYFFLANLSFVDVCFTTNLIP-----RLLASHVSGTEIISYAHcltqmYF 105
Cdd:cd15098   7 FGLIFCLGVLGNSLVItvLARVKPGKRRSTTNVFILNLSIADLFFLLFCVPfqatiYSLPEWVFGAFMCKFVH-----YF 81
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 47576087 106 LISFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLIS--------LVHTLLMNRLTFC 171
Cdd:cd15098  82 FTVSMLVSIFTLVAMSVDRYIAVVHSRTSSSLRTRRNALLGVLVIWVLSLAMAspvavhqdLVHHWTASNQTFC 155
7tmA_D2_dopamine_R cd15309
D2 subtype of the D2-like family of dopamine receptors, member of the class A family of ...
36-158 2.83e-04

D2 subtype of the D2-like family of dopamine receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Dopamine receptors are members of the class A G protein-coupled receptors that are involved in many neurological processes in the central nervous system (CNS). The neurotransmitter dopamine is the primary endogenous agonist for dopamine receptors. Dopamine receptors consist of at least five subtypes: D1, D2, D3, D4, and D5. The D1 and D5 subtypes are members of the D1-like family of dopamine receptors, whereas the D2, D3 and D4 subtypes are members of the D2-like family. Activation of D2-like family receptors is linked to G proteins of the G(i) family. This leads to a decrease in adenylate cyclase activity, thereby decreasing cAMP levels. Dopamine receptors are major therapeutic targets for neurological and psychiatric disorders such as drug abuse, depression, schizophrenia, or Parkinson's disease.


Pssm-ID: 320435 [Multi-domain]  Cd Length: 254  Bit Score: 41.56  E-value: 2.83e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  36 MYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANVDTF 115
Cdd:cd15309  10 LIFVIVFGNVLVCMAVSREKALQTTTNYLIVSLAVADLLVATLVMPWVVYLEVVGEWRFSRIHCDIFVTLDVMMCTASIL 89
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....
gi 47576087 116 LLAAMALDRFVAICYPLQYHTIITPQLCVG-LAAVVWICSGLIS 158
Cdd:cd15309  90 NLCAISIDRYTAVAMPMLYNTRYSSKRRVTvMISVVWVLSFAIS 133
7tmA_XCR1 cd15182
XC chemokine receptor 1, member of the class A family of seven-transmembrane G protein-coupled ...
33-239 3.01e-04

XC chemokine receptor 1, member of the class A family of seven-transmembrane G protein-coupled receptors; XCR1 is a chemokine receptor specific for XCL1 and XCL2 (previously called lymphotactin alpha/beta), which differ in only two amino acids. XCL1/2 is the only member of the C chemokine subfamily, which is unique as containing only two of the four cysteines that are found in other chemokine families. Human XCL1/2 has been shown to be secreted by activated CD8+ T cells and upon activation of the innate immune system. Chemokines are principal regulators for leukocyte trafficking, recruitment, and activation. Chemokine family membership is defined on the basis of sequence homology and on the presence of variations on a conserved cysteine motif, which allows the family to further divide into four subfamilies (CC, CXC, XC, and CX3C). Chemokines interact with seven-transmembrane receptors which are typically coupled to G protein for signaling.


Pssm-ID: 341337 [Multi-domain]  Cd Length: 271  Bit Score: 41.58  E-value: 3.01e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  33 FLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLiPRLLASHVSGTEIISYAHCLTQMYFLISFaNV 112
Cdd:cd15182   7 YYLVFLLSLLGNGLVLWILVKYEKLKTLTNIFILNLAISDLLFTFTL-PFWASYHSSGWIFGEILCKAVTSIFYIGF-YS 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 113 DTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLislvhtllmnrltfcSSIPEISHFYCDAYLLMKLAC 192
Cdd:cd15182  85 SILFLTLMTIDRYLAVVHPLSALRSRKLRYASLVSVAVWVISIL---------------ASLPELILSTVMKSDEDGSLC 149
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*....
gi 47576087 193 SDTRINQLV--FLGAVVLFVAPCILIVFSYVRIAMAVFQIPSaKGRHKA 239
Cdd:cd15182 150 EYSSIKWKLgyYYQQNLFFLIPLGIIVYCYVRILQTLMRTRT-MRKHRT 197
7tmA_GnRHR_invertebrate cd15384
invertebrate gonadotropin-releasing hormone receptors, member of the class A family of ...
35-223 3.40e-04

invertebrate gonadotropin-releasing hormone receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; GnRHR, also known as luteinizing hormone releasing hormone receptor (LHRHR), plays an central role in vertebrate reproductive function; its activation by binding to GnRH leads to the release of follicle stimulating hormone (FSH) and luteinizing hormone (LH) from the pituitary gland. GnRHR is expressed predominantly in the gonadotrope membrane of the anterior pituitary as well as found in numerous extrapituitary tissues including lymphocytes, breast, ovary, prostate, and cancer cell lines. There are at least two types of GnRH receptors, GnRHR1 and GnRHR2, which couple primarily to G proteins of the Gq/11 family. GnRHR is closely related to the adipokinetic hormone receptor (AKH), which binds to a lipid-mobilizing hormone that is involved in control of insect metabolism. They share a common ancestor and are members of the class A of the seven-transmembrane, G-protein coupled receptor (GPCR) superfamily.


Pssm-ID: 320506 [Multi-domain]  Cd Length: 293  Bit Score: 41.65  E-value: 3.40e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  35 CMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANVDT 114
Cdd:cd15384   9 VMFVISFIGNLLTIIQIYRLRRSRRTIYSLLLHLAIADLLVTFFCIPSEAIWAYTVAWLAGNTMCKLVKYLQVFGLYLST 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 115 FLLAAMALDRFVAICYPLQYHTiiTPQLCVGLAAVVWICSGLISLVHTLLMNrltfCSSIPEISHFY-CDAYLLMKLACS 193
Cdd:cd15384  89 YITVLISLDRCVAILYPMKRNQ--APERVRRMVTVAWILSPIFSIPQAVIFH----VERGPFVEDFHqCVTYGFYTAEWQ 162
                       170       180       190
                ....*....|....*....|....*....|
gi 47576087 194 DTRINQLVFlgaVVLFVAPCILIVFSYVRI 223
Cdd:cd15384 163 EQLYNMLSL---VFMFPIPLVIMVTCYVLI 189
7tmA_HCAR-like cd14991
hydroxycarboxylic acid receptors and related proteins, member of the class A family of ...
37-291 3.68e-04

hydroxycarboxylic acid receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the hydroxycarboxylic acid receptors (HCARs) as well as their closely related receptors, GPR31 and oxoeicosanoid receptor 1 (OXER1). HCARs are members of the class A family of G-protein coupled receptors (GPCRs). HCAR subfamily contain three receptor subtypes: HCAR1, HCAR2, and HCAR3. The endogenous ligand of HCAR1 (also known as lactate receptor 1, GPR104, or GPR81) is L-lactic acid. The endogenous ligands of HCAR2 (also known as niacin receptor 1, GPR109A, nicotinic acid receptor) and HCAR3 (also known as niacin receptor 2, orGPR109B) are 3-hydroxybutyric acid and 3-hydroxyoctanoic acid, respectively. All three HCA receptors are expressed in adipocytes, and are coupled to G(i)-proteins mediating anti-lipolytic effects in fat cells. OXER1 is a receptor for eicosanoids and polyunsaturated fatty acids such as 5-oxo-6E,8Z,11Z,14Z-eicosatetraenoic acid (5-OXO-ETE), 5(S)-hydroperoxy-6E,8Z,11Z,14Z-eicosatetraenoic acid (5(S)-HPETE) and arachidonic acid, whereas GPR31 is a high-affinity receptor for 12-(S)-hydroxy-5,8,10,14-eicosatetraenoic acid (12-S-HETE).


Pssm-ID: 320122 [Multi-domain]  Cd Length: 280  Bit Score: 41.28  E-value: 3.68e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  37 YLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLiPRLLASHVSG-TEIISYAHCLTQMYFLISFANVDTF 115
Cdd:cd14991  11 FVLGLPGNVVALWIFCFHSRTWKANTVYLFNLVLADFLLLICL-PFRIDYYLRGeHWIFGEAWCRVNLFMLSVNRSASIA 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 116 LLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWIcsGLISL-VHTLLMNRLTFCSSIPEishfyCDAYLLMKLACSD 194
Cdd:cd14991  90 FLTAVALDRYFKVVHPHHRVNRMSVKAAAGVAGLLWA--LVLLLtLPLLLSTLLTVNSNKSS-----CHSFSSYTKPSLS 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 195 TRINQLVFLGAVVLfvaPCILIVFSYVRIAMAVfQIPSAKGRHKAFSTCSSHLTVVILFYGT---------VLGIYIRPP 265
Cdd:cd14991 163 IRWHNALFLLEFFL---PLGLIVFCSVRIACNL-RIRQSLGKQARVQRAIRLVFLVVIVFVLcflpsiiagLLALVFKNL 238
                       250       260       270
                ....*....|....*....|....*....|.
gi 47576087 266 DSFSTQDTVA-----TIMYTVVTPMLNPFIY 291
Cdd:cd14991 239 GSCRCLNSVAqlfhiSLAFTYLNSALDPVIY 269
7tmA_Chemokine_R cd14984
classical and atypical chemokine receptors, member of the class A family of ...
115-239 3.85e-04

classical and atypical chemokine receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Chemokines are principal regulators for leukocyte trafficking, recruitment, and activation. Chemokine family membership is defined on the basis of sequence homology and on the presence of variations on a conserved cysteine motif, which allows the family to further divide into four subfamilies (CC, CXC, XC, and CX3C). Chemokines interact with seven-transmembrane receptors which are typically coupled to G protein for signaling. Currently, there are ten known receptors for CC chemokines, seven for CXC chemokines, and single receptors for the XC and CX3C chemokines. In addition to these classical chemokine receptors, there exists a subfamily of atypical chemokine receptors (ACKRs) that are unable to couple to G-proteins and, instead, they preferentially mediate beta-arrestin dependent processes, such as receptor internalization, after ligand binding. The classical chemokine receptors contain a conserved DRYLAIV motif in the second intracellular loop, which is required for G-protein coupling. However, the ACKRs lack this conserved motif and fail to couple to G-proteins and induce classical GPCR signaling. Five receptors have been identified for the ACKR family, including CC-chemokine receptors like 1 and 2 (CCRL1 and CCRL2), CXCR7, Duffy antigen receptor for chemokine (DARC), and D6. Both ACKR1 (DARC) and ACKR3 (CXCR7) show low sequence homology to the classic chemokine receptors.


Pssm-ID: 341319 [Multi-domain]  Cd Length: 278  Bit Score: 41.43  E-value: 3.85e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 115 FLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLlmnrltFCSSIPEISHFYCDAYLLMKLACS- 193
Cdd:cd14984  87 LFLACISIDRYLAIVHAVSALRARTLLHGKLTCLGVWALALLLSLPEFI------FSQVSEENGSSICSYDYPEDTATTw 160
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*..
gi 47576087 194 DTRIN-QLVFLGavvlFVAPCILIVFSYVRIAMAVFQIPSAKgRHKA 239
Cdd:cd14984 161 KTLLRlLQNILG----FLLPLLVMLFCYSRIIRTLLRARNHK-KHRA 202
7tmA_GPR12 cd15961
G protein-coupled receptor 12, member of the class A family of seven-transmembrane G ...
44-302 4.11e-04

G protein-coupled receptor 12, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR3, GPR6, and GPR12 form a subfamily of constitutively active G-protein coupled receptors with dual coupling to G(s) and G(i) proteins. These three orphan receptors are involved in the regulation of cell proliferation and survival, neurite outgrowth, cell clustering, and maintenance of meiotic prophase arrest. They constitutively activate adenylate cyclase to a similar degree as that seen with fully activated G(s)-coupled receptors, and are also able to constitutively activate inhibitory G(i/o) proteins. Lysophospholipids such as sphingosine 1-phosphate (S1P) and sphingosylphosphorylcholine have been detected as the high-affinity ligands for Gpr6 and Gpr12, respectively, which show high sequence homology with GPR3.


Pssm-ID: 320627 [Multi-domain]  Cd Length: 268  Bit Score: 41.17  E-value: 4.11e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  44 NTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEiisyAHCLTQMYFLISFANVDTFLLAAMALD 123
Cdd:cd15961  18 NAIVVLIIFQNPSLRAPMFLLIGSLALADLLAGIGLILNFIFAYLLQSE----AAKLVTVGLIVASFSASVCSLLAITVD 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 124 RFVAICYPLQYHTIITPQLCVGLAAVVW---ICSGLISLVHTLLMNRLTFCSSIPEISH---------FYCDAYLLMKLA 191
Cdd:cd15961  94 RYLSLYYALTYNSERTVTFTYVMLVLLWgasICLGLLPVMGWNCLADESTCSVVRPLTKnnaailsvsFLLMFALMLQLY 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 192 csdTRINQLVFLGAVVLFVAPCILIVFSYVRIAMAVFQIPSAKGrhkAFSTCSSHLTVVilfygTVLGIYIRPPDSfstq 271
Cdd:cd15961 174 ---IQICKIVMRHAHQIALQHHFLATSHYVTTRKGVSTLAIILG---TFAACWMPFTLY-----SLIADYTYPSIY---- 238
                       250       260       270
                ....*....|....*....|....*....|.
gi 47576087 272 dTVATIMYTVVTPMLNPFIYSLRNKDMKQTV 302
Cdd:cd15961 239 -TYATLLPATYNSIINPVIYAFRNQEIQKAL 268
7tmA_prokineticin-R cd15204
prokineticin receptors, member of the class A family of seven-transmembrane G protein-coupled ...
32-229 4.33e-04

prokineticin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Prokineticins 1 (PROK1) and 2 (PROK2), also known as endocrine gland vascular endothelial factor and Bombina varigata 8, respectively, are multifunctional chemokine-like peptides that are highly conserved across species. Prokineticins can bind with similar affinities to two closely homologous 7-transmembrane G protein coupled receptors, PROKR1 and PROKR2, which are phylogenetically related to the tachykinin receptors. Prokineticins and their GPCRs are widely distributed in human tissues and are involved in numerous physiological roles, including gastrointestinal motility, generation of circadian rhythms, neuron migration and survival, pain sensation, angiogenesis, inflammation, and reproduction. Moreover, different point mutations in genes encoding PROK2 or its receptor (PROKR2) can lead to Kallmann syndrome, a disease characterized by delayed or absent puberty and impaired olfactory function.


Pssm-ID: 320332 [Multi-domain]  Cd Length: 288  Bit Score: 41.11  E-value: 4.33e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  32 AFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAH--CLTQMYFLISF 109
Cdd:cd15204   6 VYVLIMLVCGVGNLLLIAVLARYKKLRTLTNLLIANLALSDFLVAVFCLPFEMDYYVVRQRSWTHGDvlCAVVNYLRTVS 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 110 ANVDTFLLAAMALDRFVAICYPLQyhTIITPQLCVGLAAVVWICSGLISL-------VHTLLMNRLTFCSSIPEISH-FY 181
Cdd:cd15204  86 LYVSTNALLVIAIDRYLVIVHPLK--PRMKRRTACVVIALVWVVSLLLAIpsavyskTTPYANQGKIFCGQIWPVDQqAY 163
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*...
gi 47576087 182 CDAYLLMKLacsdtrinqlvflgaVVLFVAPCILIVFSYVRIAMAVFQ 229
Cdd:cd15204 164 YKAYYLFLF---------------VLEFVLPVLIMTLCYLRIVRKVWF 196
7tmA_NKR_NK3R cd16003
neuromedin-K receptor, member of the class A family of seven-transmembrane G protein-coupled ...
32-153 4.49e-04

neuromedin-K receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The neuromedin-K receptor (NKR), also known as tachykinin receptor 3 (TACR3) or neurokinin B receptor or NK3R, is a G-protein coupled receptor that specifically binds to neurokinin B. The tachykinins (TKs) act as excitatory transmitters on neurons and cells in the gastrointestinal tract. The TKs are characterized by a common five-amino acid C-terminal sequence, Phe-X-Gly-Leu-Met-NH2, where X is a hydrophobic residue. The three major mammalian tachykinins are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB). The physiological actions of tachykinins are mediated through three types of receptors: neurokinin receptor type 1 (NK1R), NK2R, and NK3R. NK3R is activated by its high-affinity ligand, NKB, which is primarily involved in the central nervous system and plays a critical role in the regulation of gonadotropin hormone release and the onset of puberty.


Pssm-ID: 320669 [Multi-domain]  Cd Length: 282  Bit Score: 41.07  E-value: 4.49e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  32 AFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFT--TNLIPRLLASHvsGTEIISYAHCLTQMYFLISF 109
Cdd:cd16003   6 AYGFVVAVAVFGNLIVIWIILAHKRMRTVTNYFLVNLAFSDASMAafNTLINFIYALH--SEWYFGEAYCRFHNFFPITS 83
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....
gi 47576087 110 ANVDTFLLAAMALDRFVAICYPLQyhtiitPQLCVGLAAVVWIC 153
Cdd:cd16003  84 VFASIYSMTAIAVDRYMAIIDPLK------PRLSATATKVVIGS 121
7tmA_Delta_opioid_R cd15089
opioid receptor subtype delta, member of the class A family of seven-transmembrane G ...
38-157 4.62e-04

opioid receptor subtype delta, member of the class A family of seven-transmembrane G protein-coupled receptors; The delta-opioid receptor binds the endogenous pentapeptide ligands such as enkephalins and produces antidepressant-like effects. The opioid receptor family is composed of four major subtypes: mu (MOP), delta (DOP), kappa (KOP) opioid receptors, and the nociceptin/orphanin FQ peptide receptor (NOP). They are distributed widely in the central nervous system and respond to classic alkaloid opiates, such as morphine and heroin, as well as to endogenous peptide ligands, which include dynorphins, enkephalins, endorphins, endomorphins, and nociceptin. Opioid receptors are coupled to inhibitory G proteins of the G(i/o) family and involved in regulating a variety of physiological functions such as pain, addiction, mood, stress, epileptic seizure, and obesity, among many others.


Pssm-ID: 320217 [Multi-domain]  Cd Length: 281  Bit Score: 41.09  E-value: 4.62e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  38 LVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLiPRLLASHVSGTeiISYAHCLTQMYFLISFANVDT--F 115
Cdd:cd15089  12 VVGLLGNVLVMYGIVRYTKMKTATNIYIFNLALADALATSTL-PFQSAKYLMET--WPFGELLCKAVLSIDYYNMFTsiF 88
                        90       100       110       120
                ....*....|....*....|....*....|....*....|..
gi 47576087 116 LLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLI 157
Cdd:cd15089  89 TLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLSSGV 130
7tmA_V1aR cd15385
vasopressin receptor subtype 1A, member of the class A family of seven-transmembrane G ...
37-158 5.04e-04

vasopressin receptor subtype 1A, member of the class A family of seven-transmembrane G protein-coupled receptors; V1a-type receptor is a G(q/11)-coupled receptor that mediates blood vessel constriction. Vasopressin (also known as arginine vasopressin or anti-diuretic hormone) is synthesized in the hypothalamus and is released from the posterior pituitary gland. The actions of vasopressin are mediated by the interaction of this hormone with three receptor subtypes: V1aR, V1bR, and V2R. These subtypes are differ in localization, function, and signaling pathways. Activation of V1aR and V1bR stimulate phospholipase C, while activation of V2R stimulates adenylate cyclase. Although vasopressin and oxytocin differ only by two amino acids and stimulate the same cAMP/PKA pathway, they have divergent physiological functions. Vasopressin is involved in regulating blood pressure and the balance of water and sodium ions, whereas oxytocin plays an important role in the uterus during childbirth and in lactation.


Pssm-ID: 320507 [Multi-domain]  Cd Length: 301  Bit Score: 40.96  E-value: 5.04e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  37 YLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVD-VCFTTNLIPRL---LASHVSGTEIIsyAHCLTQMYFLISFANv 112
Cdd:cd15385  11 FAVAVIGNSSVLLALYKTKKKASRMHLFIKHLSLADlVVAFFQVLPQLcwdITYRFYGPDFL--CRIVKHLQVLGMFAS- 87
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*..
gi 47576087 113 dTFLLAAMALDRFVAICYPLQyhTIITP-QLCVGLAAVVWICSGLIS 158
Cdd:cd15385  88 -TYMLVMMTADRYIAICHPLK--TLQQPtKRSYLMIGSAWALSFILS 131
7tmA_OT_R cd15387
oxytocin receptor, member of the class A family of seven-transmembrane G protein-coupled ...
32-133 5.04e-04

oxytocin receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Oxytocin is a peptide of nine amino acids synthesized in the hypothalamus and is released from the posterior pituitary gland. Oxytocin plays an important role in sexual reproduction of both sexes and is structurally very similar to vasopressin. Although vasopressin and oxytocin differ only by two amino acids and stimulate the same cAMP/PKA pathway, they have divergent physiological functions. Vasopressin is involved in regulating blood pressure and the balance of water and sodium ions, whereas oxytocin plays an important role in the uterus during childbirth and in lactation.


Pssm-ID: 320509 [Multi-domain]  Cd Length: 297  Bit Score: 40.96  E-value: 5.04e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  32 AFLCMYL-VTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVD-VCFTTNLIPRLL---ASHVSGTEIIsyahCLTQMYFL 106
Cdd:cd15387   5 TVLALILfLALTGNICVLLAIHTTRHKHSRMYFFMKHLSIADlVVAVFQVLPQLIwdiTFRFYGPDFL----CRLVKYLQ 80
                        90       100
                ....*....|....*....|....*..
gi 47576087 107 ISFANVDTFLLAAMALDRFVAICYPLQ 133
Cdd:cd15387  81 VVGMFASTYMLLLMSIDRCLAICQPLR 107
7tmA_BRS-3 cd15123
bombesin receptor subtype 3, member of the class A family of seven-transmembrane G ...
39-237 5.13e-04

bombesin receptor subtype 3, member of the class A family of seven-transmembrane G protein-coupled receptors; BRS-3 is classified as an orphan receptor and belongs to the bombesin subfamily of G-protein coupled receptors, whose members also include neuromedin B receptor (NMBR) and gastrin-releasing peptide receptor (GRPR). Bombesin is a tetradecapeptide, originally isolated from frog skin. Mammalian bombesin-related peptides are widely distributed in the gastrointestinal and central nervous systems. The bombesin family receptors couple primarily to the G proteins of G(q/11) family. BRS-3 interacts with known naturally-occurring bombesin-related peptides with low affinity; however, no endogenous high-affinity ligand to the receptor has been identified. BRS-3 is suggested to play a role in sperm cell division and maturation.


Pssm-ID: 320251 [Multi-domain]  Cd Length: 294  Bit Score: 41.06  E-value: 5.13e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  39 VTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANVDTFLLA 118
Cdd:cd15123  13 VGILGNAILIKVFFKIKSMQTVPNIFITSLAFGDLLLLLTCVPVDATRYIADTWLFGRIGCKLLSFIQLTSVGVSVFTLT 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 119 AMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSIPEISHFYCDAYLLMKLACSDTRiN 198
Cdd:cd15123  93 VLSADRYRAIVKPLELQTSDAVLKTCCKAGCVWIVSMLFAIPEAVFSDLYSFRDPEKNTTFEACAPYPVSEKILQEIH-S 171
                       170       180       190       200
                ....*....|....*....|....*....|....*....|...
gi 47576087 199 QLVFLgavVLFVAPCILIVFSYVRIAMAVFQ----IPSAKGRH 237
Cdd:cd15123 172 LLCFL---VFYIIPLSIISVYYFLIARTLYKstfnMPAEEHSH 211
7tmA_Mel1C cd15401
melatonin receptor subtype 1C, member of the class A family of seven-transmembrane G ...
38-248 5.21e-04

melatonin receptor subtype 1C, member of the class A family of seven-transmembrane G protein-coupled receptors; Melatonin (N-acetyl-5-methoxytryptamine) is a naturally occurring sleep-promoting chemical found in vertebrates, invertebrates, bacteria, fungi, and plants. In mammals, melatonin is secreted by the pineal gland and is involved in regulation of circadian rhythms. Its production peaks during the nighttime, and is suppressed by light. Melatonin is shown to be synthesized in other organs and cells of many vertebrates, including the Harderian gland, leukocytes, skin, and the gastrointestinal (GI) tract, which contains several hundred times more melatonin than the pineal gland and is involved in the regulation of GI motility, inflammation, and sensation. Melatonin exerts its pleiotropic physiological effects through specific membrane receptors, named MT1A, MT1B, and MT1C, which belong to the class A rhodopsin-like G-protein coupled receptor family. MT1A and MT1B subtypes are present in mammals, whereas MT1C subtype has been found in amphibians and birds. The melatonin receptors couple to G proteins of the G(i/o) class, leading to the inhibition of adenylate cyclase.


Pssm-ID: 320523 [Multi-domain]  Cd Length: 279  Bit Score: 41.05  E-value: 5.21e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  38 LVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANVDTFLL 117
Cdd:cd15401  12 VVDVLGNLLVILSVLRNKKLRNAGNIFVVSLSVADLVVAVYPYPLILLAIFHNGWTLGNIHCQISGFLMGLSVIGSVFNI 91
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 118 AAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSgLISLVHTLLMNRLTFCSSIpeishFYCdayllmklACSDTRI 197
Cdd:cd15401  92 TAIAINRYCYICHSLRYDKLYNMKKTCCYVCLTWVLT-LAAIVPNFFVGSLQYDPRI-----YSC--------TFAQTVS 157
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|.
gi 47576087 198 NQLVFLGAVVLFVAPCILIVFSYVRIAMAVFQIpsakgRHKAFSTCSSHLT 248
Cdd:cd15401 158 SSYTITVVVVHFIVPLSIVTFCYLRIWVLVIQV-----KHRVRQDSKQKLK 203
7tmA_capaR cd15134
neuropeptide capa receptor and similar invertebrate proteins, member of the class A family of ...
41-227 5.42e-04

neuropeptide capa receptor and similar invertebrate proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; CapaR is a G-protein coupled receptor for the Drosophila melanogaster capa neuropeptides (Drm-capa-1 and -2), which act on the Malpighian tubules to increase fluid transport. The capa peptides are evolutionarily related to vertebrate Neuromedin U neuropeptide and contain a C-terminal FPRXamide motif. CapaR regulates fluid homeostasis through its ligands, thereby acts as a desiccation stress-responsive receptor. CapaR undergoes desensitization, with internalization mediated by beta-arrestin-2.


Pssm-ID: 320262 [Multi-domain]  Cd Length: 298  Bit Score: 41.16  E-value: 5.42e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  41 VAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLAS------HVSGTEIISYAHCLTQMYflisfANVDT 114
Cdd:cd15134  15 VVGNLCTCIVIARNRSMHTATNYYLFSLAVSDLLLLILGLPFELYTiwqqypWVFGEVFCKLRAFLSEMS-----SYASV 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 115 FLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMnRLTFCSSIPEISHFYCDAYL--LMKLAC 192
Cdd:cd15134  90 LTITAFSVERYLAICHPLRSHTMSKLSRAIRIIIAIWIIAFVCALPFAIQT-RIVYLEYPPTSGEALEESAFcaMLNEIP 168
                       170       180       190
                ....*....|....*....|....*....|....*
gi 47576087 193 SDTRINQLVFLgavVLFVAPCILIVFSYVRIAMAV 227
Cdd:cd15134 169 PITPVFQLSTF---LFFIIPMIAIIVLYVLIGLQL 200
7tmA_GPR19 cd15008
G protein-coupled receptor 19, member of the class A family of seven-transmembrane G ...
33-134 6.09e-04

G protein-coupled receptor 19, member of the class A family of seven-transmembrane G protein-coupled receptors; G-protein coupled receptor 19 is an orphan receptor that is expressed predominantly in neuronal cells during mouse embryogenesis. Its mRNA is found frequently over-expressed in patients with small cell lung cancer. GPR19 shares a significant amino acid sequence identity with the D2 dopamine and neuropeptide Y families of receptors. Human GPR19 gene, intronless in the coding region, also has a distribution in brain overlapping that of the D2 dopamine receptor gene, and is located on chromosome 12. GPR19 is a member of the class A family of GPCRs, which represents a widespread protein family that includes the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320137 [Multi-domain]  Cd Length: 275  Bit Score: 40.59  E-value: 6.09e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  33 FLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANV 112
Cdd:cd15008   6 FGVLWLVSVFGNSLVCLVIHRSRRTQSTTNYFVVSMACADLLLSVASAPFVLLQFTSGRWTLGSAMCKLVRYFQYLTPGV 85
                        90       100
                ....*....|....*....|..
gi 47576087 113 DTFLLAAMALDRFVAICYPLQY 134
Cdd:cd15008  86 QIYVLLSICVDRFYTIVYPLSF 107
7tmA_Bombesin_R-like cd15927
bombesin receptor subfamily, member of the class A family of seven-transmembrane G ...
112-224 7.27e-04

bombesin receptor subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; This bombesin subfamily of G-protein coupled receptors consists of neuromedin B receptor (NMBR), gastrin-releasing peptide receptor (GRPR), and bombesin receptor subtype 3 (BRS-3). Bombesin is a tetradecapeptide, originally isolated from frog skin. Mammalian bombesin-related peptides are widely distributed in the gastrointestinal and central nervous systems. The bombesin family receptors couple mainly to the G proteins of G(q/11) family. NMBR functions as the receptor for the neuropeptide neuromedin B, a potent mitogen and growth factor for normal and cancerous lung and for gastrointestinal epithelial tissues. Gastrin-releasing peptide is an endogenous ligand for GRPR and shares high sequence homology with NMB in the C-terminal region. Both NMB and GRP possess bombesin-like biochemical properties. BRS-3 is classified as an orphan receptor and suggested to play a role in sperm cell division and maturation. BRS-3 interacts with known naturally-occurring bombesin-related peptides with low affinity; however, no endogenous high-affinity ligand to the receptor has been identified. The bombesin receptor family belongs to the seven transmembrane rhodopsin-like G-protein coupled receptors (class A GPCRs), which perceive extracellular signals and transduce them to guanine nucleotide-binding (G) proteins.


Pssm-ID: 320593 [Multi-domain]  Cd Length: 294  Bit Score: 40.71  E-value: 7.27e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 112 VDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFcSSIPEISHFYCDAY------ 185
Cdd:cd15927  86 VSVFTLTALSADRYFAIVNPMRKHRSQATRRTLVTAASIWIVSILLAIPEAIFSHVVTF-TLTDNQTIQICYPYpqelgp 164
                        90       100       110
                ....*....|....*....|....*....|....*....
gi 47576087 186 LLMKLacsdtrinqLVFLGAVVLFVAPCILIVFSYVRIA 224
Cdd:cd15927 165 NYPKI---------MVLLRFLVYYLIPLLIIGVFYVLMA 194
7tmA_S1PR5_Edg8 cd15348
sphingosine-1-phosphate receptor subtype 5 (S1PR5 or S1P5), also called endothelial ...
32-302 7.54e-04

sphingosine-1-phosphate receptor subtype 5 (S1PR5 or S1P5), also called endothelial differentiation gene 8 (Edg8), member of the class A family of seven-transmembrane G protein-coupled receptors; The endothelial differentiation gene (Edg) family of G-protein coupled receptors binds blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). The Edg receptors couple and activate at least three different G protein subtypes including G(i/o), G(q/11), and G(12/13).


Pssm-ID: 320470 [Multi-domain]  Cd Length: 277  Bit Score: 40.58  E-value: 7.54e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  32 AFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFAn 111
Cdd:cd15348   6 AFLAVCAFIVLENLIVLLALWRNKKFHSPMFYLLGSLTLSDLLAGAAYAANILMSGANTLKLTPALWFLREGGVFITLT- 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 112 VDTFLLAAMALDRFVAICYPLQYHTIITPQLcVGLAAVVWICSGLISLVHTLLMNRLTFCSSIPEISHFYCDAYLLMKLA 191
Cdd:cd15348  85 ASVFSLLAIAIERHITMVRMKPYPGDKRGRM-FLLIGAAWLVSILLGVLPILGWNCLGNLDACSTVLPLYAKSYILFCIT 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 192 csdtrINQLVFLGAVVLFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPDSFSTQ 271
Cdd:cd15348 164 -----VFLAILAAIVVLYARIYRIVKANSQRLGALPTRKGRARRSQKYLALLKTVTIVLGTFVACWLPLFLLLLLDVSCP 238
                       250       260       270
                ....*....|....*....|....*....|....*....
gi 47576087 272 DTVATIMY--------TVVTPMLNPFIYSLRNKDMKQTV 302
Cdd:cd15348 239 AQACPVLLkadyflglAMINSLLNPIIYTLTSRDMRRAI 277
7tmA_D4_dopamine_R cd15308
D4 dopamine receptor of the D2-like family, member of the class A family of ...
38-135 7.91e-04

D4 dopamine receptor of the D2-like family, member of the class A family of seven-transmembrane G protein-coupled receptors; Dopamine receptors are members of the class A G protein-coupled receptors that are involved in many neurological processes in the central nervous system (CNS). The neurotransmitter dopamine is the primary endogenous agonist for dopamine receptors. Dopamine receptors consist of at least five subtypes: D1, D2, D3, D4, and D5. The D1 and D5 subtypes are members of the D1-like family of dopamine receptors, whereas the D2, D3 and D4 subtypes are members of the D2-like family. Activation of D2-like family receptors is linked to G proteins of the G(i) family. This leads to a decrease in adenylate cyclase activity, thereby decreasing cAMP levels. Dopamine receptors are major therapeutic targets for neurological and psychiatric disorders such as drug abuse, depression, schizophrenia, or Parkinson's disease.


Pssm-ID: 320434 [Multi-domain]  Cd Length: 258  Bit Score: 40.20  E-value: 7.91e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  38 LVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHV-SGTEIISYAHCLTQMYFLISFANVDTFL 116
Cdd:cd15308  12 LAIIAGNVLVCLSVCTERALKTTTNYFIVSLAVADLLLALLVLPLYVYSEFqGGVWTLSPVLCDALMTMDVMLCTASIFN 91
                        90
                ....*....|....*....
gi 47576087 117 LAAMALDRFVAICYPLQYH 135
Cdd:cd15308  92 LCAISVDRFIAVSVPLNYN 110
7tmA_Mu_opioid_R cd15090
opioid receptor subtype mu, member of the class A family of seven-transmembrane G ...
28-159 8.44e-04

opioid receptor subtype mu, member of the class A family of seven-transmembrane G protein-coupled receptors; The mu-opioid receptor binds endogenous opioids such as beta-endorphin and endomorphin. The opioid receptor family is composed of four major subtypes: mu (MOP), delta (DOP), kappa (KOP) opioid receptors, and the nociceptin/orphanin FQ peptide receptor (NOP). They are distributed widely in the central nervous system and respond to classic alkaloid opiates, such as morphine and heroin, as well as to endogenous peptide ligands, which include dynorphins, enkephalins, endorphins, endomorphins, and nociceptin. Opioid receptors are coupled to inhibitory G proteins of the G(i/o) family and involved in regulating a variety of physiological functions such as pain, addiction, mood, stress, epileptic seizure, and obesity, among many others.


Pssm-ID: 320218 [Multi-domain]  Cd Length: 279  Bit Score: 40.36  E-value: 8.44e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLiPRLLASHVSGTeiISYAHCLTQMYFLI 107
Cdd:cd15090   2 TIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATSTL-PFQSVNYLMGT--WPFGNILCKIVISI 78
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....
gi 47576087 108 SFANVDT--FLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISL 159
Cdd:cd15090  79 DYYNMFTsiFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIVNVCNWILSSAIGL 132
7tmA_5-HT2B cd15306
serotonin receptor subtype 2B, member of the class A family of seven-transmembrane G ...
31-159 9.47e-04

serotonin receptor subtype 2B, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341347 [Multi-domain]  Cd Length: 277  Bit Score: 40.20  E-value: 9.47e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  31 WAFLCMYLV---TVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIP-RLLASHVSGTEIISYAHCLTQMYFL 106
Cdd:cd15306   2 WAALLILMViipTIGGNILVILAVSLEKKLQYATNYFLMSLAVADLLVGLFVMPiALLTILFEAMWPLPLVLCPIWLFLD 81
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|...
gi 47576087 107 ISFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISL 159
Cdd:cd15306  82 VLFSTASIMHLCAISLDRYIAIKKPIQASQYNSRATAFIKITVVWLISIGIAI 134
7tmA_NPR-like_invertebrate cd15391
invertebrate neuropeptide receptor-like, member of the class A family of seven-transmembrane G ...
41-160 1.02e-03

invertebrate neuropeptide receptor-like, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes putative neuropeptide receptor found in invertebrates, which is a member of class A of 7-transmembrane G protein-coupled receptors. This orphan receptor shares a significant amino acid sequence identity with the neurokinin 1 receptor (NK1R). The endogenous ligand for NK1R is substance P, an 11-amino acid peptide that functions as a vasodilator and neurotransmitter and is released from the autonomic sensory nerve fibers.


Pssm-ID: 320513 [Multi-domain]  Cd Length: 289  Bit Score: 40.19  E-value: 1.02e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  41 VAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANVDTFLLAAM 120
Cdd:cd15391  15 VGGNYSVIVVFYDGRRSRTDLNYYLINLAVSDLIMALFCMPFTFTQIMLGHWVFPAPMCPIVLYVQLVSVTASVLTNTAI 94
                        90       100       110       120
                ....*....|....*....|....*....|....*....|
gi 47576087 121 ALDRFVAICYPLqyHTIITPQLCVGLAAVVWICSGLISLV 160
Cdd:cd15391  95 GIDRFFAVIFPL--RSRHTKSRTKCIIASIWAISFSLSSV 132
7tmA_S1PR4_Edg6 cd15349
sphingosine-1-phosphate receptor subtype 4 (S1PR4 or S1P4), also called endothelial ...
32-302 1.10e-03

sphingosine-1-phosphate receptor subtype 4 (S1PR4 or S1P4), also called endothelial differentiation gene 6 (Edg6), member of the class A family of seven-transmembrane G protein-coupled receptors; The endothelial differentiation gene (Edg) family of G-protein coupled receptors binds blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). The Edg receptors couple and activate at least three different G protein subtypes including G(i/o), G(q/11), and G(12/13).


Pssm-ID: 320471 [Multi-domain]  Cd Length: 271  Bit Score: 40.15  E-value: 1.10e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  32 AFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFAn 111
Cdd:cd15349   6 LFICISVLIILENLLVLLAILRRVRLRRWVYICLANIALSDLLTGTSYLVNICLSGERTFRLTPALWFLREGLLFTALA- 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 112 VDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSIPEISHFYCDAYLLMKLA 191
Cdd:cd15349  85 ASTFSLLVTAVERYATMVRPVAENTATKTYRVYGMIVLCWILAFLIGFLPLLGWNCLCDFRSCSSLLPLYSKSYILFCLV 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 192 csdtrINQLVFLGAVVLFVApciliVFSYVRIAMAvfQIPSAKGRHKAFSTCSSHLTVVI--------LFYGTVLGIYIR 263
Cdd:cd15349 165 -----IFFIILLTIIGLYFA-----IYCLVRASGQ--RVISARSRRRSLRLLKTVLMILGafmvcwgpLFILLLVDFFCS 232
                       250       260       270
                ....*....|....*....|....*....|....*....
gi 47576087 264 PPDSFSTQDTVATIMYTVVTPMLNPFIYSLRNKDMKQTV 302
Cdd:cd15349 233 SRSCKPLFGMEWVLALAVLNSAINPLIYSFRSLEVRRAV 271
7tmA_tyramine_octopamine_R-like cd15060
tyramine/octopamine receptor-like, member of the class A family of seven-transmembrane G ...
38-299 1.10e-03

tyramine/octopamine receptor-like, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes tyramine/octopamine receptors and similar proteins found in insects and other invertebrates. Both octopamine and tyramine mediate their actions via G protein-coupled receptors (GPCRs) and are the invertebrate equivalent of vertebrate adrenergic neurotransmitters. In Drosophila, octopamine is involved in ovulation by mediating an egg release from the ovary, while a physiological role for tyramine in this process is not fully understood. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320188 [Multi-domain]  Cd Length: 260  Bit Score: 39.72  E-value: 1.10e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  38 LVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANVDTFLL 117
Cdd:cd15060  12 AFTIVGNILVILSVFTYRPLRIVQNFFIVSLAVADLAVAIFVLPLNVAYFLLGKWLFGIHLCQMWLTCDILCCTASILNL 91
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 118 AAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNrltfcsSIPEISHfycdayllMKLACSDTRI 197
Cdd:cd15060  92 CAIALDRYWAIHDPINYAQKRTLKRVLLMIVVVWALSALISVPPLIGWN------DWPENFT--------ETTPCTLTEE 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 198 NQLVFLGAVVLFVAPCILIVFSYVRIAMAvfqipSAKGRhKAFSTCSSHLTVVILFYGTVLGIY-IRP-----PDSFSTQ 271
Cdd:cd15060 158 KGYVIYSSSGSFFIPLLIMTIVYVKIFIA-----TSKER-RAARTLGIIMGVFVVCWLPFFLMYvILPfcetcSPSAKVV 231
                       250       260
                ....*....|....*....|....*...
gi 47576087 272 DTVATIMYtvVTPMLNPFIYSLRNKDMK 299
Cdd:cd15060 232 NFITWLGY--VNSALNPVIYTIFNLDFR 257
7tmA_GPR26_GPR78-like cd15219
G protein-coupled receptors 26 and 78, member of the class A family of seven-transmembrane G ...
46-301 1.11e-03

G protein-coupled receptors 26 and 78, member of the class A family of seven-transmembrane G protein-coupled receptors; Orphan G-protein coupled receptor 26 (GPR26) and GPR78 are constitutively active and coupled to increased cAMP formation. They are closely related based on sequence homology and comprise a conserved subgroup within the class A G-protein coupled receptor (GPCR) superfamily. Both receptors are widely expressed in selected tissues of the brain but their endogenous ligands are unknown. GPR26 knockout mice showed increased levels of anxiety- and depression-like behaviors, whereas GPR78 has been implicated in susceptibility to bipolar affective disorder and schizophrenia. Members of this subgroup contain the highly conserved Asp-Arg-Tyr/Phe (DRY/F) motif found in the third transmembrane helix (TM3) of the rhodopsin-like class A receptors which is important for efficient G protein-coupled signal transduction. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320347 [Multi-domain]  Cd Length: 264  Bit Score: 39.75  E-value: 1.11e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  46 LIFLAISSDPRLHTPMyFFLANLSFVDVCFTTNLIPRLLASHVSGTEiiSYAHCLTQMY-FLISFANVDTFL-LAAMALD 123
Cdd:cd15219  21 LLCFLYSAELRKQVPG-IFLLNLSFCNLLLTVLNMPFTLLGVVRNRQ--PFGDGFCQAVgFLETFLTSNAMLsMAALSID 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 124 RFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVhTLLMNRLTFcssipeiSHFYCDAYLLMKLACSDTRINQLVFL 203
Cdd:cd15219  98 RWIAVVFPLSYTSKMRYRDAALMVGYSWLHSLTFSLV-ALFLSWLGY-------SSLYASCTLHLPREEERRRFAVFTAF 169
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 204 GAVVLFVAPCILIVFSYvriamavFQIPSAKGRHKAFSTCSSHL-TVVILFYGTVLG--IYIRPPDSFSTQDTVATIMYT 280
Cdd:cd15219 170 FHAFTFLLSLLVLCVTY-------LKVLKVRRRQRATKKISIFIgTFVLCFAPYVITrlVELLPFVTINRYWGIVSKCLT 242
                       250       260
                ....*....|....*....|.
gi 47576087 281 VVTPMLNPFIYSLRNKDMKQT 301
Cdd:cd15219 243 YSKAASDPFVYSLLRQQYRKV 263
7tmA_QRFPR cd15205
pyroglutamylated RFamide peptide receptor, member of the class A family of seven-transmembrane ...
28-224 1.12e-03

pyroglutamylated RFamide peptide receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; 26RFa, also known as QRFP (Pyroglutamylated RFamide peptide), is a 26-amino acid residue peptide that belongs to a family of neuropeptides containing an Arg-Phe-NH2 (RFamide) motif at its C-terminus. 26Rfa/QRFP exerts similar orexigenic activity including the regulation of feeding behavior in mammals. It is the ligand for G-protein coupled receptor 103 (GPR103), which is predominantly expressed in paraventricular (PVN) and ventromedial (VMH) nuclei of the hypothalamus. GPR103 shares significant protein sequence homology with orexin receptors (OX1R and OX2R), which have recently shown to produce a neuroprotective effect in Alzheimer's disease by forming a functional heterodimer with GPR103.


Pssm-ID: 320333 [Multi-domain]  Cd Length: 298  Bit Score: 40.15  E-value: 1.12e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTqMYFLI 107
Cdd:cd15205   2 AFVITYVLIFVLALFGNSLVIYVVTRKRAMRTATNIFICSLALSDLLITFFCIPFTLLQNISSNWLGGAFMCKM-VPFVQ 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 108 SFANVDTFL-LAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSIPEISHFYCdayl 186
Cdd:cd15205  81 STAVVTSILtMTCIAVERHQGIVHPLKMKWQYTNRRAFTMLGLVWIVSVIVGSPMLFVQQLEVKYDFLYEKRHVCC---- 156
                       170       180       190
                ....*....|....*....|....*....|....*...
gi 47576087 187 LMKLACSDTRINQLVFLgAVVLFVAPCILIVFSYVRIA 224
Cdd:cd15205 157 LERWYSPTQQKIYTTFI-LVILFLLPLTTMLFLYSRIG 193
7tmA_NPSR cd15197
neuropeptide S receptor, member of the class A family of seven-transmembrane G protein-coupled ...
32-159 1.16e-03

neuropeptide S receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Neuropeptide S (NPS) promotes arousal and anxiolytic-like effects by activating its cognate receptor NPSR. NPSR is widely expressed in the brain, and its activation induces an elevation of intracellular calcium and cAMP concentrations, presumably by coupling to G(s) and G(q) proteins. Mutations in NPSR have been associated with an increased susceptibility to asthma. NPSR was originally identified as an orphan receptor GPR154 and is also known as G protein receptor for asthma susceptibility (GPRA) or vasopressin receptor-related receptor 1 (VRR1).


Pssm-ID: 320325 [Multi-domain]  Cd Length: 294  Bit Score: 40.10  E-value: 1.16e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  32 AFLC-MYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVC-----FTTNLIPRLLASHVSGTEIisyahCLTQMYF 105
Cdd:cd15197   5 ATLWvLFVFIVVGNSSVLFALWMRKAKKSRMNFFITQLAIADLCvglinVLTDIIWRITVEWRAGDFA-----CKVIRYL 79
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....
gi 47576087 106 LISFANVDTFLLAAMALDRFVAICYPLQYHTiiTPQLCVGLAAVVWICSGLISL 159
Cdd:cd15197  80 QVVVTYASTYVLVALSIDRYDAICHPMNFSQ--SGRQARVLICVAWILSALFSI 131
7tmA_NPY2R cd15399
neuropeptide Y receptor type 2, member of the class A family of seven-transmembrane G ...
28-158 1.33e-03

neuropeptide Y receptor type 2, member of the class A family of seven-transmembrane G protein-coupled receptors; NPY is a 36-amino acid peptide neurotransmitter with a C-terminal tyrosine amide residue that is widely distributed in the brain and the autonomic nervous system of many mammalian species. NPY exerts its functions through five, G-protein coupled receptor subtypes including NPY1R, NPY2R, NPY4R, NPY5R, and NPY6R; however, NPY6R is not functional in humans. NYP receptors are also activated by its two other family members, peptide YY (PYY) and pancreatic polypeptide (PP). They typically couple to G(i) or G(o) proteins, which leads to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels, and are involved in diverse physiological roles including appetite regulation, circadian rhythm, and anxiety. When NPY signals through NPY2R in concert with NPY5R, it induces angiogenesis and consequently plays an important role in revascularization and wound healing. On the other hand, when NPY acts through NPY1R and NPYR5, it acts as a vascular mitogen, leading to restenosis and atherosclerosis.


Pssm-ID: 320521 [Multi-domain]  Cd Length: 285  Bit Score: 39.80  E-value: 1.33e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLI 107
Cdd:cd15399   2 VLILAYCSIILLGVVGNSLVIYVVIKFKNMRTVTNFFIANLAVADLMVNTLCLPFTLVYTLLDEWKFGAVLCHLVPYAQA 81
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|.
gi 47576087 108 SFANVDTFLLAAMALDRFVAICYPLQyhTIITPQLCVGLAAVVWICSGLIS 158
Cdd:cd15399  82 LAVHVSTVTLTVIALDRHRCIVYHLE--SKISKKISFLIIGLTWAASALLA 130
7tmA_LPAR1_Edg2 cd15344
lysophosphatidic acid receptor subtype 1 (LPAR1 or LPA1), also called endothelial ...
43-301 1.34e-03

lysophosphatidic acid receptor subtype 1 (LPAR1 or LPA1), also called endothelial differentiation gene 2 (Edg2), member of the class A family of seven-transmembrane G protein-coupled receptors; The endothelial differentiation gene (Edg) family of G-protein coupled receptors binds blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). The Edg receptors couple and activate at least three different G protein subtypes including G(i/o), G(q/11), and G(12/13).


Pssm-ID: 341348 [Multi-domain]  Cd Length: 273  Bit Score: 39.62  E-value: 1.34e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  43 GNTLIFLAISSDPRLHTPMYFFLANLSFVDVcFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANVDTFLLAAMAL 122
Cdd:cd15344  17 ANLLVMVAIYVNRRFHFPIYYLMANLAAADF-FAGLAYFYLMFNTGPNTRRLTVSTWLLRQGLIDTSLTASVANLLAIAI 95
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 123 DRFVAIcYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSIPEISHFYCDAYLLMKLAcsdtrINQLVF 202
Cdd:cd15344  96 ERHITV-FRMQLHTRMSNRRVVVVIVVIWTMAIVMGAIPSVGWNCICDIENCSNMAPLYSDSYLVFWAI-----FNLVTF 169
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 203 LGAVVLFVApciliVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVL----GIYIRPPDSFSTQDTVAT-- 276
Cdd:cd15344 170 VVMVVLYAH-----IFGYVRQRTMRMSRHSSGPRRNRDTMMSLLKTVVIVLGAFIIcwtpGLVLLLLDVCCPQCDVLAye 244
                       250       260
                ....*....|....*....|....*...
gi 47576087 277 ---IMYTVVTPMLNPFIYSLRNKDMKQT 301
Cdd:cd15344 245 kffLLLAEFNSAMNPIIYSYRDKEMSAT 272
7tmA_GPR161 cd15214
orphan G protein-coupled receptor 161, member of the class A family of seven-transmembrane G ...
32-154 1.39e-03

orphan G protein-coupled receptor 161, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR161, an orphan GPCR, is a negative regulator of Sonic hedgehog (Shh) signaling, which promotes the processing of zinc finger protein GLI3 into its transcriptional repressor form (GLI3R) during neural tube development. In the absence of Shh, this proteolytic processing is normally mediated by cAMP-dependent protein kinase A (PKA). GPR161 is recruited to primary cilia by a mechanism depends on TULP3 (tubby-related protein 3) and the intraflagellar complex A (IFT-A). Moreover, Gpr161 knockout mice show phenotypes observed in Tulp3/IFT-A mutants, and cause increased Shh signaling in the neural tube. Taken together, GPR161 negatively regulates the PKA-dependent GLI3 processing in the absence of Shh signal by coupling to G(s) protein, which causes activation of adenylate cyclase, elevated cAMP levels, and activation of PKA. Conversely, in the presence of Shh, GPR161 is removed from the cilia by internalization into the endosomal recycling compartment, leading to downregulation of its activity and thereby allowing Shh signaling to proceed. In addition, GPR161 is over-expressed in triple-negative breast cancer (lacking estrogen receptor, progesterone receptor, and human epidermal growth factor receptor 2 (HER2) expression) and correlates with poor prognosis. Mutations of GPR161 have also been implicated as a novel cause for pituitary stalk interruption syndrome (PSIS), a rare congenital disease of the pituitary gland. GPR161 is a member of the class A family of GPCRs, which contains receptors for hormones, neurotransmitters, sensory stimuli, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320342 [Multi-domain]  Cd Length: 261  Bit Score: 39.54  E-value: 1.39e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  32 AFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHC--LTQMYFLISF 109
Cdd:cd15214   5 AIIIIAILICLGNLVIVVTLYKKSYLLTLSNKFVFSLTLSNLLLSVLVLPFVVTSSIRREWIFGVVWCnfSALLYLLISS 84
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*
gi 47576087 110 ANVDTflLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICS 154
Cdd:cd15214  85 ASMLT--LGAIAIDRYYAVLYPMVYPMKITGNRAVLALVYIWLHS 127
PHA02638 PHA02638
CC chemokine receptor-like protein; Provisional
104-234 1.46e-03

CC chemokine receptor-like protein; Provisional


Pssm-ID: 165021 [Multi-domain]  Cd Length: 417  Bit Score: 40.00  E-value: 1.46e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  104 YFLISFANVdtFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNR----LTFCSSIPEISH 179
Cdd:PHA02638 175 YYIGFFSNM--FLITLMSIDRYFAILYPISFQKYRTFNIGIILCIISWILSLIITSPAYFIFEAsniiFSAQDSNETISN 252
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 47576087  180 FYCDAYLlmklacsDTRINQLVFLGAVVLF-------VAPCILIVFSYVRIAMAVFQIPSAK 234
Cdd:PHA02638 253 YQCTLIE-------DNEKNNISFLGRILQFeinilgmFIPIIIFAFCYIKIILKLKQLKKSK 307
7tmA_PAR cd15162
protease-activated receptors, member of the class A family of seven-transmembrane G ...
33-238 1.67e-03

protease-activated receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes purinergic receptor P2Y8 and protease-activated receptors. P2Y8 (or P2RY8) expression is often increased in leukemia patients, and it plays a role in the pathogenesis of acute leukemia. P2Y8 is phylogenetically closely related to the protease-activated receptors (PARs), which are activated by serine proteases such as thrombin, trypsin, and tryptase. These proteases cleave the extracellular domain of the receptor to form a new N-terminus, which in turn functions as a tethered ligand. The newly-formed tethered ligand binds intramolecularly to activate the receptor and triggers G-protein binding and intracellular signaling. Four different types of the protease-activated receptors have been identified (PAR1-4) and are predominantly expressed in platelets. PAR1, PAR3, and PAR4 are activated by thrombin, whereas PAR2 is activated by trypsin. The PARs are known to couple with several G-proteins including Gi (cAMP inhibitory), G12/13 (Rho and Ras activation), and Gq (calcium signaling) to activate downstream signaling messengers which induces numerous cellular and physiological effects.


Pssm-ID: 341328 [Multi-domain]  Cd Length: 280  Bit Score: 39.35  E-value: 1.67e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  33 FLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLlASHVSGTEIIsYAHCLTQMYFLISFANV 112
Cdd:cd15162   7 YTLVFVVGLPANGMALWVLLFRTKKKAPAVIYMANLAIADLLLVIWLPFKI-AYHIHGNNWI-FGEALCRLVTVAFYGNM 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 113 --DTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICsgLISLVHTLLMNRLTFcsSIPEISHFYCDAYLLMKL 190
Cdd:cd15162  85 ycSILLLTCISIDRYLAIVHPMGHRRLRARRYALGTCLAIWLL--ALLVTLPLYLVKQTI--FLPALDITTCHDVLPEQL 160
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*...
gi 47576087 191 ACSDTRINQLVFlgAVVLFVAPCILIVFSYVRIAMAVFQIPSAKGRHK 238
Cdd:cd15162 161 LVGDWFYYFLSL--AIVGFLIPFILTASCYVATIRTLAALEDENSEKK 206
7tmA_Cannabinoid_R cd15099
cannabinoid receptors, member of the class A family of seven-transmembrane G protein-coupled ...
34-299 1.78e-03

cannabinoid receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Cannabinoid receptors belong to the class A G-protein coupled receptor superfamily. Two types of cannabinoid receptors, CB1 and CB2, have been identified so far. They are activated by naturally occurring endocannabinoids, cannabis plant-derived cannabinoids such as tetrahydrocannabinol, or synthetic cannabinoids. The CB receptors are involved in the various physiological processes such as appetite, mood, memory, and pain sensation. CB1 receptor is expressed predominantly in central and peripheral neurons, while CB2 receptor is found mainly in the immune system.


Pssm-ID: 320227 [Multi-domain]  Cd Length: 281  Bit Score: 39.44  E-value: 1.78e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  34 LCMYLVTVAGNTLIFLAISSDPRLH-TPMYFFLANLSFVD----VCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLis 108
Cdd:cd15099   8 FLAGPVTFLENILVLLTILSSTALRrRPSYLFIGSLALADmlasVIFTISFLDFHVFHQRDSRNLFLFKLGGVTMAFT-- 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 109 fANVDTFLLAAmaLDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSIPEISHFYCDAYLLm 188
Cdd:cd15099  86 -ASVGSLLLTA--LDRYLCIYQPSNYKLLVTRTRAKVAILLMWCVTIIISFLPLMGWRCKTWDSPCSRLFPYIDRHYLA- 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 189 klacSDTRINQLVFLGAVVLFvaPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPDSF 268
Cdd:cd15099 162 ----SWTGLQLVLLFLIIYAY--PYILWKAHRHEANMGGPKLGRQQVKGQARMRMDIRLAKTLSLILLVLAICWLPVLAF 235
                       250       260       270       280
                ....*....|....*....|....*....|....*....|...
gi 47576087 269 STQDTVATI------------MYTVVTPMLNPFIYSLRNKDMK 299
Cdd:cd15099 236 MLVDVRVTLtnkqkrmfafcsMLCLVNSCVNPIIYALRSRELR 278
7tmA_LPAR2_Edg4 cd15342
lysophosphatidic acid receptor subtype 2 (LPAR2 or LPA2), also called Endothelial ...
44-301 2.07e-03

lysophosphatidic acid receptor subtype 2 (LPAR2 or LPA2), also called Endothelial differentiation gene 4 (Edg4), member of the class A family of seven-transmembrane G protein-coupled receptors; The endothelial differentiation gene (Edg) family of G-protein coupled receptors binds blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). The Edg receptors couple and activate at least three different G protein subtypes including G(i/o), G(q/11), and G(12/13).


Pssm-ID: 320464 [Multi-domain]  Cd Length: 274  Bit Score: 39.01  E-value: 2.07e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  44 NTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFaNVDTFLLAAMALD 123
Cdd:cd15342  18 NLLVIAAIFINRRFHYPIYYLLGNLAAADLFAGVAYLFLMFHTGPWTAKLSLYQWFLRQGLLDTSL-TASVANLLAIAVE 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 124 RFVAIcYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSIPEISHFYCDAYLLMKLAcsdtrINQLVFL 203
Cdd:cd15342  97 RHQTI-FTMQLHSKMSNQRVVILIFGIWMVALILGLIPAMGWNCLCDLKRCSTMAPLYSRSYLVFWAL-----SNLLTFL 170
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 204 GAVVLFVApciliVFSYVRIAMA-VFQIPSAKGRHKAfSTCSSHLTVVILFYGTVL------------GIYIRPPDSFST 270
Cdd:cd15342 171 IMVAVYTR-----IFIYVRRKSQrMSEHHSSHPRYRE-TVLGLMKTVVIILGAFVVcwtpgqvvllldGLGCESCNVLAY 244
                       250       260       270
                ....*....|....*....|....*....|.
gi 47576087 271 QDTVatIMYTVVTPMLNPFIYSLRNKDMKQT 301
Cdd:cd15342 245 EKYF--LLLAEINSLVNPIVYSYRDKEMRKT 273
7tmA_GPR25 cd15193
G protein-coupled receptor 25, member of the class A family of seven-transmembrane G ...
33-224 2.41e-03

G protein-coupled receptor 25, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR25 is an orphan G-protein coupled receptor that shares strong sequence homology to GPR15 and the angiotensin II receptors. These closely related receptors form a group within the class A G-protein coupled receptors (GPCRs). GPR15 controls homing of T cells, especially FOXP3(+) regulatory T cells, to the large intestine mucosa and thereby mediates local immune homeostasis. Moreover, GRP15-deficient mice were shown to be prone to develop more severe large intestine inflammation. Angiotensin II (Ang II), the main effector in the renin-angiotensin system, plays a crucial role in the regulation of cardiovascular homeostasis through its type 1 (AT1) and type 2 (AT2) receptors.


Pssm-ID: 320321 [Multi-domain]  Cd Length: 279  Bit Score: 38.96  E-value: 2.41e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  33 FLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLiPRLLASHVSGTEIISYAHCLTQMYFLIS---F 109
Cdd:cd15193   7 YLIIFFTGLLGNLFVIALMSKRSTTKRLVDTFVLNLAVADLVFVLTL-PFWAASTALGGQWLFGEGLCKLSSFIIAvnrC 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 110 ANVdtFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICS---GLISLVHTLLMNRlTFCSSIPEiSHFYCDAYL 186
Cdd:cd15193  86 SSI--LFLTGMSVDRYLAVVKLLDSRPLRTRRCALITCCIIWAVSlvlGIPSLVYRNLINE-SVCVEDSS-SRFFQGISL 161
                       170       180       190
                ....*....|....*....|....*....|....*...
gi 47576087 187 LMklacsdtrinqlVFLgavvLFVAPCILIVFSYVRIA 224
Cdd:cd15193 162 AT------------LFL----TFVLPLIVILFCYCSIL 183
7tmA_Melanopsin cd15336
vertebrate melanopsins (Opsin-4), member of the class A family of seven-transmembrane G ...
34-159 2.53e-03

vertebrate melanopsins (Opsin-4), member of the class A family of seven-transmembrane G protein-coupled receptors; Melanopsin (also called Opsin-4) is the G protein-coupled photopigment that mediates non-visual responses to light. In mammals, these photoresponses include the photo-entrainment of circadian rhythm, pupillary constriction, and acute nocturnal melatonin suppression. Mammalian melanopsins are expressed only in the inner retina, whereas non-mammalian vertebrate melanopsins are localized in various extra-retinal tissues such as iris, brain, pineal gland, and skin. Melanopsins belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320458 [Multi-domain]  Cd Length: 290  Bit Score: 38.93  E-value: 2.53e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  34 LCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVD---------VCFTTNLIPRLLASHVsGTEIISYAHCLtqmy 104
Cdd:cd15336   8 LIIGITGMLGNALVIYAFCRSKKLRTPANYFIINLAVSDflmsltqspIFFVNSLHKRWIFGEK-GCELYAFCGAL---- 82
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*
gi 47576087 105 flisFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISL 159
Cdd:cd15336  83 ----FGITSMITLLAISLDRYLVITKPLASIRWVSKKRAMIIILLVWLYSLAWSL 133
7tmA_GPR151 cd15002
G protein-coupled receptor 151, member of the class A family of seven-transmembrane G ...
38-300 2.94e-03

G protein-coupled receptor 151, member of the class A family of seven-transmembrane G protein-coupled receptors; G-protein coupled receptor 151 (GRP151) is an orphan receptor of unknown function. Its expression is conserved in habenular axonal projections of vertebrates and may be a promising novel target for psychiatric drug development. GPR151 shows high sequence similarity with galanin receptors (GALR). GPR151 is a member of the class A rhodopsin-like GPCRs, which represent a widespread protein family that includes the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320133 [Multi-domain]  Cd Length: 280  Bit Score: 38.55  E-value: 2.94e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  38 LVTVAGNTLIFLAISSDPRLHTP--MYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANVDTF 115
Cdd:cd15002  11 LLGFAGNLMVIGILLNNARKGKPslIDSLILNLSAADLLLLLFSVPFRAAAYSKGSWPLGWFVCKTADWFGHACMAAKSF 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 116 LLAAMALDRFVAICYPLQYHTiITPQLCVGLAAVVWICSGLISLVHTLLM------NRLTFCSSIPEISHFYCDAYLLMK 189
Cdd:cd15002  91 TIAVLAKACYMYVVNPTKQVT-IKQRRITAVVASIWVPACLLPLPQWLFRtvkqseGVYLCILCIPPLAHEFMSAFVKLY 169
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 190 lacsdtrinqlvFLGAvvlFVAPCILIVFSYVRIAMAVfQIPSAKGRHKAFSTCSSHLTVVILFYGT----------VLG 259
Cdd:cd15002 170 ------------PLFV---FCLPLTFALFYFWRAYGQC-QRRGTKTQNLRNQIRSRKLTHMLLSVVLaftilwlpewVAW 233
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*....
gi 47576087 260 IYIR--------PPDSFStqdTVATIMYTVVTPMlNPFIYSLRNKDMKQ 300
Cdd:cd15002 234 LWLIhikssgssPPQLFN---VLAQLLAFSISSV-NPIIFLLMSEEFRE 278
7tmA_CXCR1_2 cd15178
CXC chemokine receptor types 1 and 2, member of the class A family of seven-transmembrane G ...
37-159 3.43e-03

CXC chemokine receptor types 1 and 2, member of the class A family of seven-transmembrane G protein-coupled receptors; CXCR1 and CXCR2 are closely related chemotactic receptors for a group of CXC chemokines distinguished by the presence of the amino acid motif ELR immediately adjacent to their CXC motif. Expression of CXCR1 and CXCR2 is strictly controlled in neutrophils by external stimuli such as lipopolysaccharide (LPS), tumor necrosis factor (TNF)-alpha, Toll-like receptor agonists, and nitric oxide. CXCL8 (formerly known as interleukin-8) binds with high-affinity and activates both receptors. CXCR1 also binds CXCL7 (neutrophil-activating protein-2), whereas CXCR2 non-selectively binds to all seven ELR-positive chemokines (CXCL1-7). Chemokines are principal regulators for leukocyte trafficking, recruitment, and activation. Chemokine family membership is defined on the basis of sequence homology and on the presence of variations on a conserved cysteine motif, which allows the family to further divide into four subfamilies (CC, CXC, XC, and CX3C). Chemokines interact with seven-transmembrane receptors which are typically coupled to G protein for signaling. Currently, there are ten known receptors for CC chemokines, seven for CXC chemokines, and single receptors for the XC and CX3C chemokines.


Pssm-ID: 341333 [Multi-domain]  Cd Length: 279  Bit Score: 38.41  E-value: 3.43e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  37 YLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLiPRLLASHVSGTeIISYAHCltQMYFLISFANVDT-- 114
Cdd:cd15178  11 FLLSLPGNSLVVLVILYNRRSRSSTDVYLLHLAIADLLFALTL-PFWAVSVVKGW-IFGTFMC--KLVSLLQEANFYSgi 86
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*.
gi 47576087 115 FLLAAMALDRFVAICYPLQYHTiiTPQLCVGLA-AVVWICSGLISL 159
Cdd:cd15178  87 LLLACISVDRYLAIVHATRALT--QKRHLVKFVcAGVWLLSLLLSL 130
7tmA_NOFQ_opioid_R cd15092
nociceptin/orphanin FQ peptide receptor, member of the class A family of seven-transmembrane G ...
33-159 3.66e-03

nociceptin/orphanin FQ peptide receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The nociceptin (NOP) receptor binds nociceptin or orphanin FQ, a 17 amino acid endogenous neuropeptide. The NOP receptor is involved in the modulation of various brain activities including instinctive and emotional behaviors. The opioid receptor family is composed of four major subtypes: mu (MOP), delta (DOP), kappa (KOP) opioid receptors, and the nociceptin/orphanin FQ peptide receptor (NOP). They are distributed widely in the central nervous system and respond to classic alkaloid opiates, such as morphine and heroin, as well as to endogenous peptide ligands, which include dynorphins, enkephalins, endorphins, endomorphins, and nociceptin. Opioid receptors are coupled to inhibitory G proteins of the G(i/o) family and involved in regulating a variety of physiological functions such as pain, addiction, mood, stress, epileptic seizure, and obesity, among many others.


Pssm-ID: 320220 [Multi-domain]  Cd Length: 279  Bit Score: 38.31  E-value: 3.66e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  33 FLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFttnliprLLASHVSGTEII----SYAHCLTQMYFLIS 108
Cdd:cd15092   7 YLIVCVVGLVGNCLVMYVILRHTKMKTATNIYIFNLALADTLV-------LLTLPFQGTDIFlgfwPFGNALCKTVIAID 79
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|...
gi 47576087 109 FANV--DTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISL 159
Cdd:cd15092  80 YYNMftSTFTLTAMSVDRYVAICHPIKALDVRTPHKAKVVNVCIWALASVVGV 132
7tmA_UII-R cd14999
urotensin-II receptor, member of the class A family of seven-transmembrane G protein-coupled ...
36-300 3.69e-03

urotensin-II receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The urotensin-II receptor (UII-R, also known as the hypocretin receptor) is a member of the class A rhodopsin-like G-protein coupled receptors, which binds the peptide hormone urotensin-II. Urotensin II (UII) is a vasoactive somatostatin-like or cortistatin-like peptide hormone. However, despite the apparent structural similarity to these peptide hormones, they are not homologous to UII. Urotensin II was first identified in fish spinal cord, but later found in humans and other mammals. In fish, UII is secreted at the back part of the spinal cord, in a neurosecretory centre called uroneurapophysa, and is involved in the regulation of the renal and cardiovascular systems. In mammals, urotensin II is the most potent mammalian vasoconstrictor identified to date and causes contraction of arterial blood vessels, including the thoracic aorta. The urotensin II receptor is a rhodopsin-like G-protein coupled receptor, which binds urotensin-II. The receptor was previously known as GPR14, or sensory epithelial neuropeptide-like receptor (SENR). The UII receptor is expressed in the CNS (cerebellum and spinal cord), skeletal muscle, pancreas, heart, endothelium and vascular smooth muscle. It is involved in the pathophysiological control of cardiovascular function and may also influence CNS and endocrine functions. Binding of urotensin II to the receptor leads to activation of phospholipase C, through coupling to G(q/11) family proteins. The resulting increase in intracellular calcium may cause the contraction of vascular smooth muscle.


Pssm-ID: 320130 [Multi-domain]  Cd Length: 282  Bit Score: 38.58  E-value: 3.69e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  36 MYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNlIPRLLASHVSGTEIISYAHC--LTQMYFLISFANVd 113
Cdd:cd14999   9 MCVVGVAGNVYTLVVMCLSMRPRASMYVYILNLALADLLYLLT-IPFYVSTYFLKKWYFGDVGCrlLFSLDFLTMHASI- 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 114 tFLLAAMALDRFVAICYPLQYHTIITpQLCVGLAAVVWICSGLISLvHTLLMNRLTFCSsipeishfycDAYLLMKLACS 193
Cdd:cd14999  87 -FTLTVMSTERYLAVVKPLDTVKRSK-SYRKLLAGVIWLLSLLLTL-PMAIMIRLVTVE----------DKSGGSKRICL 153
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 194 DTR--INQLVFLGA--VVLFVAPCILIVFSYVRIAMAvFQIPSAKGRHKAFSTCSSH------LTVVILFYGTVLGIYIR 263
Cdd:cd14999 154 PTWseESYKVYLTLlfSTSIVIPGLVIGYLYIRLARK-YWLSQAAASNSSRKRLPKQkvlkmiFTIVLVFWACFLPFWIW 232
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*...
gi 47576087 264 P-----PDSFSTQDTVATIMYTVVTPM------LNPFIYSLRNKDMKQ 300
Cdd:cd14999 233 QllylySPSLSLSPRTTTYVNYLLTCLtysnscINPFLYTLLTKNYKE 280
7tmA_PGE2_EP4 cd15142
prostaglandin E2 receptor EP4 subtype, member of the class A family of seven-transmembrane G ...
36-296 3.83e-03

prostaglandin E2 receptor EP4 subtype, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostaglandin E2 receptor EP4, also called prostanoid EP4 receptor, is one of four receptor subtypes whose endogenous physiological ligand is prostaglandin E2 (PGE2). Each of these subtypes (EP1-EP4) have unique but overlapping tissue distributions that activate different intracellular signaling pathways. Like the EP2 receptor, stimulation of the EP4 receptor by PGE2 causes cAMP accumulation through G(s) protein activation. Knockout studies in mice suggest that EP4 receptor may be involved in the maintenance of bone mass and fracture healing. Prostanoids are the cyclooxygenase (COX) metabolites of arachidonic acid, which include the prostaglandins (PGD2, PGE2, PGF2alpha), prostacyclin (PGI2), and thromboxane A2 (TxA2). These five major bioactive prostanoids acts as mediators or modulators in a wide range of physiological and pathophysiological processes within the kidney and play important roles in inflammation, platelet aggregation, and vasoconstriction/relaxation, among many others. They act locally by preferentially interacting with G protein-coupled receptors designated DP, EP. FP, IP, and TP, respectively. The phylogenetic tree suggests that the prostanoid receptors can be grouped into two major branches: G(s)-coupled (DP1, EP2, EP4, and IP) and G(i)- (EP3) or G(q)-coupled (EP1, FP, and TP), forming three clusters.


Pssm-ID: 320270 [Multi-domain]  Cd Length: 302  Bit Score: 38.25  E-value: 3.83e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  36 MYLVTVAGN--TLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANVD 113
Cdd:cd15142  10 MFIFGVVGNliAIVVLCKSRKEQKETTFYTLVCGLAVTDLLGTCLASPVTIATYLKGRWPGGQPLCEYFSFILLFFSLSG 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 114 TFLLAAMALDRFVAICYPLQYHTIITPQLC------VGLAAVVWICSGLISLVHTLLMNRLTFCSSIPEISHFYCDAYLL 187
Cdd:cd15142  90 LSIICAMSIERYLAINHAYFYNHYVDKRLAgltlfaIYASNILFCALPSMGLGKSKLQYPKTWCFIDWRTNVSVHAAYSY 169
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 188 MKLACSdtrinQLVFLGAVVLFVAPCILIVF----SYVRIAMAVFQIPSAKGRHKAFS-TCSSHLTVVILFYGTVLGIYI 262
Cdd:cd15142 170 MYAGFS-----SLLILVTVLCNVLVCGALIRmhrqFVRRTSLGTDQRLSDFRRRRSFRrMAGAEIQMVILLIATSVVVLI 244
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|.
gi 47576087 263 ---------------RPP--DSFSTQDTVATIMYTVVTPMLNPFIYSLRNK 296
Cdd:cd15142 245 csiplvvrvfvnqlyQPAveKDLDKNPDLQAIRIASVNPILDPWIYILLRK 295
7tmA_GPR185-like cd15960
G protein-coupled receptor 185 and similar proteins, member of the class A family of ...
44-302 4.29e-03

G protein-coupled receptor 185 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR185, also called GPRx, is a member of the constitutively active GPR3/6/12 subfamily of G protein-coupled receptors. It plays a role in the maintenance of meiotic arrest in Xenopus laevis oocytes through G(s) protein, which leads to increased cAMP levels. In Xenopus laevis, GPR185 is primarily expressed in brain, ovary, and testis; however, its ortholog has not been identified in other vertebrate genomes. GPR3, GPR6, and GPR12 form a subfamily of constitutively active G-protein coupled receptors with dual coupling to G(s) and G(i) proteins. These three orphan receptors are involved in the regulation of cell proliferation and survival, neurite outgrowth, cell clustering, and maintenance of meiotic prophase arrest.


Pssm-ID: 320626 [Multi-domain]  Cd Length: 268  Bit Score: 37.95  E-value: 4.29e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  44 NTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISyahcLTQMYFLISFANVDTFLLAAMALD 123
Cdd:cd15960  18 NAIVIAILFYTPSLRAPMFILIGSLALADLLAGLGLIANFVAIYVMNSEAVT----LCSAGLLLAAFSASVCSLLAITVD 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 124 RFVAICYPLQYHTIITPQLCVGLAAVVW---ICSGLISLVHTLLMNRLTFCSsipeishfycdayllmklACSDTRINQL 200
Cdd:cd15960  94 RYLSLYNALTYHTERTLTFTYGLLALLWltcIGIGLLPAMGWNCLRAPASCS------------------VLRPVTKNNA 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 201 VFLGAVVLFVAPCILIVFSYV-RIAMAVFQIPSAKGRHKAFSTCS------SHLTVVILFYGTV---LGIYIRPPD-SFS 269
Cdd:cd15960 156 AVLAVSFLLLFALMMQLYLQIcRIAFRHAQQIAVQHQFVNFCLASstrkgvSTLSLILATFAFCwvpFAVYSMVADsSYP 235
                       250       260       270
                ....*....|....*....|....*....|...
gi 47576087 270 TQDTVATIMYTVVTPMLNPFIYSLRNKDMKQTV 302
Cdd:cd15960 236 MIYTYYLVLPAACNSVINPIIYAFRNPDIQKSL 268
7tmA_Angiotensin_R-like cd14985
angiotesin receptor family and its related G protein-coupled receptors, member of the class A ...
33-224 4.60e-03

angiotesin receptor family and its related G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the angiotensin receptors, the bradykinin receptors, apelin receptor as well as putative G-protein coupled receptors (GPR15 and GPR25). Angiotensin II (Ang II), the main effector in the renin-angiotensin system, plays a crucial role in the regulation of cardiovascular homeostasis through its type 1 (AT1) and type 2 (AT2) receptors. Ang II contributes to cardiovascular diseases such as hypertension and atherosclerosis via AT1R activation. Ang II increases blood pressure through Gq-mediated activation of phospholipase C, resulting in phosphoinositide (PI) hydrolysis and increased intracellular calcium levels. Through the AT2 receptor, Ang II counteracts the vasoconstrictor action of AT1R and thereby induces vasodilation, sodium excretion, and reduction of blood pressure. Bradykinins (BK) are pro-inflammatory peptides that mediate various vascular and pain responses to tissue injury through its B1 and B2 receptors. Apelin (APJ) receptor binds the endogenous peptide ligands, apelin and Toddler/Elabela. APJ is an adipocyte-derived hormone that is ubiquitously expressed throughout the human body, and Toddler/Elabela is a short secretory peptide that is required for normal cardiac development in zebrafish. Activation of APJ receptor plays key roles in diverse physiological processes including vasoconstriction and vasodilation, cardiac muscle contractility, angiogenesis, and regulation of water balance and food intake. Orphan receptors, GPR15 and GPR25, share strong sequence homology to the angiotensin II type AT1 and AT2 receptors.


Pssm-ID: 341320 [Multi-domain]  Cd Length: 284  Bit Score: 38.13  E-value: 4.60e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  33 FLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANV 112
Cdd:cd14985   7 YIAIFLVGLLGNLFVVWVFLFPRGPKRVADIFIANLAAADLVFVLTLPLWATYTANQYDWPFGAFLCKVSSYVISVNMFA 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 113 DTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLvHTLLMNRLTFcssIPEISHFYCdAYLLMKLAC 192
Cdd:cd14985  87 SIFLLTCMSVDRYLAIVHPVASRRLRRRRQARVTCALIWVVACLLSL-PTFLLRSLQA---IENLNKTAC-IMLYPHEAW 161
                       170       180       190
                ....*....|....*....|....*....|..
gi 47576087 193 SDTRINQLVFLGavvlFVAPCILIVFSYVRIA 224
Cdd:cd14985 162 HFGLSLELNILG----FVLPLLIILTCYFHIA 189
7tmA_mAChR_DM1-like cd15301
muscarinic acetylcholine receptor DM1, member of the class A family of seven-transmembrane G ...
38-160 4.67e-03

muscarinic acetylcholine receptor DM1, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes muscarinic acetylcholine receptor DM1-like from invertebrates. Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to the G(i/o) types of G proteins. Activation of mAChRs by agonist (acetylcholine) leads to a variety of biochemical and electrophysiological responses. In general, the exact nature of these responses and the subsequent physiological effects mainly depend on the molecular and pharmacological identity of the activated receptor subtype(s). All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320428 [Multi-domain]  Cd Length: 270  Bit Score: 37.88  E-value: 4.67e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  38 LVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANVDTFLL 117
Cdd:cd15301  12 LVTVGGNVMVMISFKIDKQLQTISNYFLFSLAVADFAIGVISMPLFTVYTALGYWPLGYEVCDTWLAIDYLASNASVLNL 91
                        90       100       110       120
                ....*....|....*....|....*....|....*....|...
gi 47576087 118 AAMALDRFVAICYPLQYHtiitPQLCVGLAAVVWICSGLISLV 160
Cdd:cd15301  92 LIISFDRYFSVTRPLTYR----ARRTTKKAAVMIASAWIISLL 130
7tmA_Opsin5_neuropsin cd15074
neuropsin (Opsin-5), member of the class A family of seven-transmembrane G protein-coupled ...
38-227 4.68e-03

neuropsin (Opsin-5), member of the class A family of seven-transmembrane G protein-coupled receptors; Neuropsin, also known as Opsin-5, is a photoreceptor protein expressed in the retina, brain, testes, and spinal cord. Neuropsin belongs to the type 2 opsin family of the class A G-protein coupled receptors. Mammalian neuropsin activates Gi protein-mediated photo-transduction pathway in a UV-dependent manner, whereas, in non-mammalian vertebrates, neuropsin is involved in regulating the photoperiodic control of seasonal reproduction in birds such as quail. As with other opsins, it may also act as a retinal photoisomerase.


Pssm-ID: 320202 [Multi-domain]  Cd Length: 284  Bit Score: 38.02  E-value: 4.68e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  38 LVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANVDTFLL 117
Cdd:cd15074  12 ILSTLGNGTVLFVLYRRRSKLKPAELLTVNLAVSDLGISVFGYPLAIISAFAHRWLFGDIGCVFYGFCGFLFGCCSINTL 91
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 118 AAMALDRFVAICYP-----LQYHTIITPQLCVGLAAVVWICSGLislvhtllmnrLTFCSSIPEISHFYC--DAYLLMKL 190
Cdd:cd15074  92 TAISIYRYLKICHPpygpkLSRRHVCIVIVAIWLYALFWAVAPL-----------VGWGSYGPEPFGTSCsiDWTGASAS 160
                       170       180       190
                ....*....|....*....|....*....|....*..
gi 47576087 191 ACSDTRINQLVFLGavvlFVAPCILIVFSYVRIAMAV 227
Cdd:cd15074 161 VGGMSYIISIFIFC----YLLPVLIIVFSYVKIIRKV 193
7tmA_PSP24-like cd15213
G protein-coupled receptor PSP24 and similar proteins, member of the class A family of ...
28-296 4.70e-03

G protein-coupled receptor PSP24 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes two human orphan receptors, GPR45 and GPR65, and their closely related proteins found in vertebrates and invertebrates. GPR45 and GPR 65 are also called PSP24-alpha (or PSP24-1) and PSP24-beta (or PSP24-2) in other vertebrates, respectively. These receptors exhibit the highest sequence homology to each other. PSP24 was originally identified as a novel, high-affinity lysophosphatidic acid (LPA) receptor in Xenopus laevis oocytes; however, PSP24 receptors (GPR45 and GPR63) have not been shown to be activated by LPA. Instead, sphingosine 1-phosphate and dioleoylphosphatidic acid have been shown to act as low affinity agonists for GPR63. PSP24 receptors are highly expressed in neuronal cells of cerebellum and their expression level remains constant from the early embryonic stages to adulthood, suggesting the important role of PSP24s in brain neuronal functions. Members of this subgroup contain the highly conserved Asp-Arg-Tyr/Phe (DRY/F) motif found in the third transmembrane helix (TM3) of the rhodopsin-like class A receptors which is important for efficient G protein-coupled signal transduction. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320341 [Multi-domain]  Cd Length: 262  Bit Score: 38.12  E-value: 4.70e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLI 107
Cdd:cd15213   2 TLAILMILMIFVGFLGNSIVCLIVYQKPAMRSAINLLLANLAFSDIMLSLVCMPFAAVTIITGRWIFGDIFCRISAMLYW 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 108 SFANVDTFLLAAMALDRFVAIcypLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSIPEISHFYCD---- 183
Cdd:cd15213  82 FFVLEGVAILLIISVDRYLII---VQRQDKLNPHRAKILIAVSWVLSFCVSFPPLVGWGKYEFPPRAPQCVLGYTEspad 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 184 -AYLLMKLacsdtrinqlvflgaVVLFVAPCILIVFSYVRIAMAVfqipsakgrhKAFSTcSSHLTVVILFYG------- 255
Cdd:cd15213 159 rIYVVLLL---------------VAVFFIPFLIMLYSYFCILNTV----------RSFKT-RAFTTILILFIGfsvcwlp 212
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*
gi 47576087 256 ----TVLGIYIRPPDSFSTQDTVaTIMYTVVTPMLNPFIYSLRNK 296
Cdd:cd15213 213 ytvySLLSVFSRYSSSFYVISTC-LLWLSYLKSAFNPVIYCWRIK 256
7tmA_MCHR-like cd15088
melanin concentrating hormone receptor, member of the class A family of seven-transmembrane G ...
33-159 5.09e-03

melanin concentrating hormone receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Melanin-concentrating hormone receptor (MCHR) binds melanin concentrating hormone and is presumably involved in the neuronal regulation of food intake and energy homeostasis. Despite strong homology with somatostatin receptors, MCHR does not appear to bind somatostatin. Two MCHRs have been characterized in vertebrates, MCHR1 and MCHR2. MCHR1 is expressed in all mammals, whereas MCHR2 is only expressed in the higher order mammals, such as humans, primates, and dogs, and is not found in rodents. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320216 [Multi-domain]  Cd Length: 278  Bit Score: 37.82  E-value: 5.09e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  33 FLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNlIPrLLASHVSGTEIISYAHCLTQMYFLISFAN- 111
Cdd:cd15088   7 FGCICVVGLVGNGIVLYVLVRCSKLRTAPDIFIFNLAVADLLFMLG-MP-FLIHQFAIDGQWYFGEVMCKIITALDANNq 84
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*....
gi 47576087 112 -VDTFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISL 159
Cdd:cd15088  85 fTSTYILTAMSVDRYLAVVHPIRSTKYRTRFVAKLVNVGLWAASFLSIL 133
7tmA_5-HT1A_vertebrates cd15330
serotonin receptor subtype 1A from vertebrates, member of the class A family of ...
36-159 5.37e-03

serotonin receptor subtype 1A from vertebrates, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT1 receptors, one of 14 mammalian 5-HT receptors, is a member of the class A of GPCRs and is activated by the endogenous neurotransmitter and peripheral signal mediator serotonin (5-hydroxytryptamine, 5-HT). The 5-HT1 receptors mediate inhibitory neurotransmission by coupling to G proteins of the G(i/o) family, which lead to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels and calcium influx. The 5-HT1 receptor subfamily includes 5 subtypes: 5-HT1A, 5-HT1B, 5-HT1D, 5-HT1E, and 5-HT1F. There is no 5-HT1C receptor subtype, as it has been reclassified as the 5-HT2C receptor. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320453 [Multi-domain]  Cd Length: 260  Bit Score: 37.65  E-value: 5.37e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  36 MYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANVDTF 115
Cdd:cd15330  10 LILCAIFGNACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLVLPMAALYQVLNKWTLGQVTCDLFIALDVLCCTSSIL 89
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....
gi 47576087 116 LLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISL 159
Cdd:cd15330  90 HLCAIALDRYWAITDPIDYVNKRTPRRAAVLISLTWLIGFSISI 133
PHA03087 PHA03087
G protein-coupled chemokine receptor-like protein; Provisional
46-312 6.20e-03

G protein-coupled chemokine receptor-like protein; Provisional


Pssm-ID: 222976 [Multi-domain]  Cd Length: 335  Bit Score: 37.84  E-value: 6.20e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087   46 LIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANvDTFLLAAMALDRF 125
Cdd:PHA03087  59 IIVIYVLTKTKIKTPMDIYLLNLAVSDLLFVMTLPFQIYYYILFQWSFGEFACKIVSGLYYIGFYN-SMNFITVMSVDRY 137
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  126 VAICYPLQYHTIITPQLCVGLAAVVWIcsglISLVHTLLMNRLTFCSSIPEISH---FYCDAYLLMKLAcsdtrINqlvF 202
Cdd:PHA03087 138 IAIVHPVKSNKINTVKYGYIVSLVIWI----ISIIETTPILFVYTTKKDHETLIccmFYNNKTMNWKLF-----IN---F 205
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  203 LGAVVLFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFY----GTVLGIYIRPPDSFSTQDTVATIM 278
Cdd:PHA03087 206 EINIIGMLIPLTILLYCYSKILITLKGINKSKKNKKAIKLVLIIVILFVIFWlpfnVSVFVYSLHILHFKSGCKAVKYIQ 285
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*.
gi 47576087  279 YTV-VTPML-------NPFIYSL----RNKDMKQTVTRLFNRGSQS 312
Cdd:PHA03087 286 YALhVTEIIslshcciNPLIYAFvsefFNKHKKKSLKLMFTSSGKS 331
7tmA_Kappa_opioid_R cd15091
opioid receptor subtype kappa, member of the class A family of seven-transmembrane G ...
36-154 7.05e-03

opioid receptor subtype kappa, member of the class A family of seven-transmembrane G protein-coupled receptors; The kappa-opioid receptor binds the opioid peptide dynorphin as the primary endogenous ligand. The opioid receptor family is composed of four major subtypes: mu (MOP), delta (DOP), kappa (KOP) opioid receptors, and the nociceptin/orphanin FQ peptide receptor (NOP). They are distributed widely in the central nervous system and respond to classic alkaloid opiates, such as morphine and heroin, as well as to endogenous peptide ligands, which include dynorphins, enkephalins, endorphins, endomorphins, and nociceptin. Opioid receptors are coupled to inhibitory G proteins of the G(i/o) family and involved in regulating a variety of physiological functions such as pain, addiction, mood, stress, epileptic seizure, and obesity, among many others.


Pssm-ID: 320219 [Multi-domain]  Cd Length: 282  Bit Score: 37.63  E-value: 7.05e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  36 MYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLiPRLLASHVSGTeiISYAHCLTQMYFLISFANVDT- 114
Cdd:cd15091  10 VFVVGLVGNSLVMFVIIRYTKMKTATNIYIFNLALADALVTTTM-PFQSTVYLMNS--WPFGDVLCKIVISIDYYNMFTs 86
                        90       100       110       120
                ....*....|....*....|....*....|....*....|.
gi 47576087 115 -FLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICS 154
Cdd:cd15091  87 iFTLTMMSVDRYIAVCHPVKALDFRTPLKAKIINICIWLLS 127
7tmA_AT1R cd15192
type 1 angiotensin II receptor, member of the class A family of seven-transmembrane G ...
36-166 7.54e-03

type 1 angiotensin II receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Angiotensin II (Ang II), the main effector in the renin-angiotensin system, plays a crucial role in the regulation of cardiovascular homeostasis through its type 1 (AT1) and type 2 (AT2) receptors. Ang II contributes to cardiovascular diseases such as hypertension and atherosclerosis via AT1R activation. Ang II increases blood pressure through Gq-mediated activation of phospholipase C, resulting in phosphoinositide (PI) hydrolysis and increased intracellular calcium levels. Through the AT2R, Ang II counteracts the vasoconstrictor action of AT1R and thereby induces vasodilation, sodium excretion, and reduction of blood pressure. Moreover, AT1R promotes cell proliferation, whereas AT2R inhibits proliferation and stimulates cell differentiation. The AT2R is highly expressed during fetal development, however it is scarcely present in adult tissues and is induced in pathological conditions. Generally, the AT1R mediates many actions of Ang II, while the AT2R is involved in the regulation of blood pressure and renal function.


Pssm-ID: 320320 [Multi-domain]  Cd Length: 285  Bit Score: 37.41  E-value: 7.54e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  36 MYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLipRLLASHVSGTEIISYAHCLTQMY--FLISFANVD 113
Cdd:cd15192  10 IFVVGIFGNSLVVIVIYCYMKLKTVANIFLLNLALADLCFLITL--PLWAAYTAMEYHWPFGNFLCKIAsaLVSFNLYAS 87
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|...
gi 47576087 114 TFLLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMN 166
Cdd:cd15192  88 VFLLTCLSIDRYLAIVHPMKSRLRRTLVVARVTCIVIWLLAGVASLPAIIHRD 140
7tmA_P2Y1-like cd15168
P2Y purinoceptors 1, 2, 4, 6, 11 and similar proteins, member of the class A family of ...
37-229 8.37e-03

P2Y purinoceptors 1, 2, 4, 6, 11 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; The P2Y receptor family is composed of eight subtypes, which are activated by naturally occurring extracellular nucleotides such as ATP, ADP, UTP, UDP, and UDP-glucose. These eight receptors are ubiquitous in human tissues and can be further classified into two subfamilies based on sequence homology and second messenger coupling: a subfamily of five P2Y1-like receptors (P2Y1, P2Y2, P2Y4, P2Y6, and P2Y11Rs) that are coupled to G(q) protein to activate phospholipase C (PLC) and a second subfamily of three P2Y12-like receptors (P2Y12, P2YR13, and P2Y14Rs) that are coupled to G(i) protein to inhibit adenylate cyclase. Several cloned subtypes, such as P2Y3, P2Y5, and P2Y7-10, are not functional mammalian nucleotide receptors. The native agonists for P2Y receptors are: ATP (P2Y2, P2Y12), ADP (P2Y1, P2Y12, and P2Y13), UTP (P2Y2, P2Y4), UDP (P2Y6, P2Y14), and UDP-glucose (P2Y14). This cluster only includes P2Y1-like receptors as well as other closely related orphan receptors, such as GPR91 (a succinate receptor) and GPR80/GPR99 (an alpha-ketoglutarate receptor).


Pssm-ID: 341329 [Multi-domain]  Cd Length: 284  Bit Score: 37.30  E-value: 8.37e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  37 YLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLiPRLLASHVSGTE-IISYAHCLTQMYFLISFANVDTF 115
Cdd:cd15168  11 FLVGLLLNSVVLYRFIFHLKPWNSSAIYMFNLAVSDLLYLLSL-PFLIYYYANGDHwIFGDFMCKLVRFLFYFNLYGSIL 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 116 LLAAMALDRFVAICYPLQYHTIITPQLCVGLAAVVWI-----CSGLISLVHTLLMNRLTFC--SSIPEishfYCDAYLLM 188
Cdd:cd15168  90 FLTCISVHRYLGICHPLRSLGKLKKRHAVAISVAVWIlvllqLLPILFFATTGRKNNRTTCydTTSPE----ELNDYVIY 165
                       170       180       190       200
                ....*....|....*....|....*....|....*....|.
gi 47576087 189 KLACsdtrinqlvflgAVVLFVAPCILIVFSYVRIAMAVFQ 229
Cdd:cd15168 166 SMVL------------TGLGFLLPLLIILACYGLIVRALIR 194
7tmA_GPR65_TDAG8 cd15365
proton-sensing G protein-coupled receptor 65, member of the class A family of ...
64-291 8.82e-03

proton-sensing G protein-coupled receptor 65, member of the class A family of seven-transmembrane G protein-coupled receptors; The T cell death associated gene-8 receptor (TDAG8, also known as GPR65) is a member of the proton-sensing G-protein-coupled receptor (GPCR) family which also includes the G2 accumulation receptor (G2A, also known as GPR132), ovarian cancer G-protein receptor 1 (OGR-1, GPR68), and G-protein-coupled receptor 4 (GPR4). Proton-sensing G-protein coupled receptors sense pH of 7.6 to 6.0 and mediates a variety of biological activities in neutral and mildly acidic pH conditions, whereas the acid-sensing ionotropic ion channels typically sense strong acidic pH. Activation of TDAG8 by extracellular acidosis increases the cAMP production, stimulates Rho, and induces stress fiber formation. TDAG8 has also been shown to regulate the extracellular acidosis-induced inhibition of pro-inflammatory cytokine production in peritoneal macrophages.


Pssm-ID: 320487 [Multi-domain]  Cd Length: 277  Bit Score: 37.07  E-value: 8.82e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  64 FLANLSFVDVCFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANVDTFLLAAMALDRFVAICYPLQYHTIITPQLC 143
Cdd:cd15365  38 YLFNLSLSDLLYIVILPLWIDYLWNGDNWTLSGFVCIFSAFLLYTNFYTSTALLTCIALDRYLAVVHPLKFMHLRTIRTA 117
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 144 VGLAAVVWICSGLISLVhtLLMNRLTFCSSipeISHFYC-DAYLLMKLAcsdTRINQLVFLGAVVLfvaPCILIVFSYVR 222
Cdd:cd15365 118 LSVSVAIWLLEICFNAV--ILTWEDSFHES---SSHTLCyDKFPLEDWQ---ARLNLFRICLGYLL---PLLIILFCYWK 186
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 223 IAMAVF--QIPSAKGRHKAFSTCSS-HLTVVILFYGTVLGIYIR----PPDSFSTQDTVA----TIMYTVVTPMLNPFIY 291
Cdd:cd15365 187 IYQAVRsnQATEDQEKKKIFKLLLLiTVTFVICFTPYHVVLLIRsivePCDCRNAKWLYTlykiTVALTSLNCIADPFLY 266
7tmA_photoreceptors_insect cd15079
insect photoreceptors R1-R6 and similar proteins, member of the class A family of ...
28-228 8.83e-03

insect photoreceptors R1-R6 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the insect photoreceptors and their closely related proteins. The Drosophila eye is composed of about 800 unit eyes called ommatidia, each of which contains eight photoreceptor cells (R1-R8). The six outer photoreceptors (R1-R6) function like the vertebrate rods and are responsible for motion detection in dim light and image formation. The R1-R6 photoreceptors express a blue-absorbing pigment, Rhodopsin 1(Rh1). The inner photoreceptors (R7 and R8) are considered the equivalent of the color-sensitive vertebrate cone cells, which express a range of different pigments. The R7 photoreceptors express one of two different UV absorbing pigments, either Rh3 or Rh4. Likewise, the R8 photoreceptors express either the blue absorbing pigment Rh5 or green absorbing pigment Rh6. These photoreceptors belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320207 [Multi-domain]  Cd Length: 292  Bit Score: 37.17  E-value: 8.83e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  28 ILFWAFLCMYLVTVAGNTLIFLAISSDPRLHTPMYFFLANLSFVDVCFTTNLiPRLLASHVSGTEIISYAHCltQMYFLI 107
Cdd:cd15079   2 LLGFIYIFLGIVSLLGNGLVIYIFSTTKSLRTPSNMLVVNLAISDFLMMIKM-PIFIYNSFYEGWALGPLGC--QIYAFL 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 108 S--FANVDTFLLAAMALDRFVAICYPLQyHTIITPQLCVGLAAVVWICSGLISLVHTLLM-NR------LTFCSSipeis 178
Cdd:cd15079  79 GslSGIGSIWTNAAIAYDRYNVIVKPLN-GNPLTRGKALLLILFIWLYALPWALLPLLFGwGRyvpegfLTSCSF----- 152
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|..
gi 47576087 179 hfycdAYLlmklacSDTrINQLVFLGAVVLF--VAPCILIVFSYVRIAMAVF 228
Cdd:cd15079 153 -----DYL------TRD-WNTRSFVATIFVFayVIPLIIIIYCYSFIVKAVF 192
7tmA_LPAR cd15101
lysophosphatidic acid receptor subfamily, member of the class A family of seven-transmembrane ...
44-301 9.22e-03

lysophosphatidic acid receptor subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; The endothelial differentiation gene (Edg) family of G-protein coupled receptors binds blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). The Edg receptors couple and activate at least three different G protein subtypes including G(i/o), G(q/11), and G(12/13).


Pssm-ID: 341325 [Multi-domain]  Cd Length: 274  Bit Score: 37.11  E-value: 9.22e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087  44 NTLIFLAISSDPRLHTPMYFFLANLSFVDVcFTTNLIPRLLASHVSGTEIISYAHCLTQMYFLISFANVDTFLLAAMALD 123
Cdd:cd15101  18 NLLVIAAIYKNRRFHFPIYYLLANLAAADF-FAGLAYFFLMFNTGPNTRRLTVSTWFLRQGLLDTSLTASVANLLAIAVE 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 124 RFVAIcYPLQYHTIITPQLCVGLAAVVWICSGLISLVHTLLMNRLTFCSSIPEISHFYCDAYLLMKlacsdTRINQLVFL 203
Cdd:cd15101  97 RHISV-MRMQLHSRLSNRRVVVLIVLVWTMAIVMGAIPSVGWNCLCAIDACSNMAPLYSRSYLVFW-----AISNLVTFL 170
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47576087 204 GAVVLFvapciLIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVIlfygtVLGIYI---RPPDSFSTQDTVATIMYT 280
Cdd:cd15101 171 VMVVVY-----ARIFVYVRRRTNRMSPHTSGSIRNRDTMMSLLKTVVI-----VLGAFVvcwTPGLVVLLLDGLCCRQCN 240
                       250       260       270
                ....*....|....*....|....*....|...
gi 47576087 281 VVT------------PMLNPFIYSLRNKDMKQT 301
Cdd:cd15101 241 VLAvekfflllaefnSAVNPIIYSYRDKEMSGT 273
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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