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Conserved domains on  [gi|157821481|ref|NP_001101846|]
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uncharacterized protein C14orf119 homolog [Rattus norvegicus]

Protein Classification

DUF4508 domain-containing protein( domain architecture ID 10633162)

DUF4508 domain-containing protein similar to Homo sapiens protein C14orf119

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4508 pfam14969
Domain of unknown function (DUF4508); This family of proteins is found in eukaryotes. Proteins ...
 38-135 7.53e-48

Domain of unknown function (DUF4508); This family of proteins is found in eukaryotes. Proteins in this family are typically between 117 and 253 amino acids in length.


:

Pssm-ID: 464413  Cd Length: 96  Bit Score: 149.35  E-value: 7.53e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821481   38 SQEMKCVLHWFASWSGPQRERFLQDLVAKAVPGKVQLLLDGLEQLSVSaaSRPPCIFECQLRLWDQWFRGWAEQERNEFV 117
Cdd:pfam14969   1 DQEMRYVLQWFQEWSELQREDFLPDLVEKAVPKKVNGLLNALANLSVQ--DKPPSLFQCRLKLFNQWFEKWSEEERNKFL 78

                          90
                  ....*....|....*...
gi 157821481  118 RQLEVGEPDFVAKFYQAV 135
Cdd:pfam14969  79 EKLEEIDPKFVEKFYQEL 96
 
Name Accession Description Interval E-value
DUF4508 pfam14969
Domain of unknown function (DUF4508); This family of proteins is found in eukaryotes. Proteins ...
 38-135 7.53e-48

Domain of unknown function (DUF4508); This family of proteins is found in eukaryotes. Proteins in this family are typically between 117 and 253 amino acids in length.


Pssm-ID: 464413  Cd Length: 96  Bit Score: 149.35  E-value: 7.53e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821481   38 SQEMKCVLHWFASWSGPQRERFLQDLVAKAVPGKVQLLLDGLEQLSVSaaSRPPCIFECQLRLWDQWFRGWAEQERNEFV 117
Cdd:pfam14969   1 DQEMRYVLQWFQEWSELQREDFLPDLVEKAVPKKVNGLLNALANLSVQ--DKPPSLFQCRLKLFNQWFEKWSEEERNKFL 78

                          90
                  ....*....|....*...
gi 157821481  118 RQLEVGEPDFVAKFYQAV 135
Cdd:pfam14969  79 EKLEEIDPKFVEKFYQEL 96
 
Name Accession Description Interval E-value
DUF4508 pfam14969
Domain of unknown function (DUF4508); This family of proteins is found in eukaryotes. Proteins ...
 38-135 7.53e-48

Domain of unknown function (DUF4508); This family of proteins is found in eukaryotes. Proteins in this family are typically between 117 and 253 amino acids in length.


Pssm-ID: 464413  Cd Length: 96  Bit Score: 149.35  E-value: 7.53e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821481   38 SQEMKCVLHWFASWSGPQRERFLQDLVAKAVPGKVQLLLDGLEQLSVSaaSRPPCIFECQLRLWDQWFRGWAEQERNEFV 117
Cdd:pfam14969   1 DQEMRYVLQWFQEWSELQREDFLPDLVEKAVPKKVNGLLNALANLSVQ--DKPPSLFQCRLKLFNQWFEKWSEEERNKFL 78

                          90
                  ....*....|....*...
gi 157821481  118 RQLEVGEPDFVAKFYQAV 135
Cdd:pfam14969  79 EKLEEIDPKFVEKFYQEL 96
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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