NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|186910253|ref|NP_001119571|]
View 

TP53-regulated inhibitor of apoptosis 1 [Rattus norvegicus]

Protein Classification

TRIAP1/MDM35 family protein( domain architecture ID 10526135)

TRIAP1/MDM35 family protein similar to Homo sapiens TP53-regulated inhibitor of apoptosis 1 (TRIAP1) and Saccharomyces cerevisiae mitochondrial distribution and morphology protein 35 (MDM35)

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
UPF0203 pfam05254
Uncharacterized protein family (UPF0203); This family of proteins is functionally ...
 2-68 6.23e-30

Uncharacterized protein family (UPF0203); This family of proteins is functionally uncharacterized.


:

Pssm-ID: 461604  Cd Length: 69  Bit Score: 100.41  E-value: 6.23e-30
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 186910253   2 NSVGEACTDMKREYDQCFNRWFAEKFLKGDGSGDPCTDLFKRYQQCVQKAIKEKEIP--IEGLEFMGHG 68
Cdd:pfam05254  1 NSLAPECTELKEKYDACFNRWYSEKFLKGKSKENECEDLWKDYQECVQKALKEKGIDklLDEAREEAPF 69
 
Name Accession Description Interval E-value
UPF0203 pfam05254
Uncharacterized protein family (UPF0203); This family of proteins is functionally ...
 2-68 6.23e-30

Uncharacterized protein family (UPF0203); This family of proteins is functionally uncharacterized.


Pssm-ID: 461604  Cd Length: 69  Bit Score: 100.41  E-value: 6.23e-30
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 186910253   2 NSVGEACTDMKREYDQCFNRWFAEKFLKGDGSGDPCTDLFKRYQQCVQKAIKEKEIP--IEGLEFMGHG 68
Cdd:pfam05254  1 NSLAPECTELKEKYDACFNRWYSEKFLKGKSKENECEDLWKDYQECVQKALKEKGIDklLDEAREEAPF 69
PLN03079 PLN03079
Uncharacterized protein At4g33100; Provisional
 3-57 2.60e-11

Uncharacterized protein At4g33100; Provisional


Pssm-ID: 178628  Cd Length: 91  Bit Score: 53.78  E-value: 2.60e-11
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*
gi 186910253  3 SVGEACTDMKREYDQCFNRWFAEKFLKGDGSGDPCTDLFKRYQQCVQKAIKEKEI 57
Cdd:PLN03079 13 SSTSPCAELRTAYHNCFNRWYSEKFVKGQWDKEDCVAEWHKYRACLSEHLEDKHL 67
 
Name Accession Description Interval E-value
UPF0203 pfam05254
Uncharacterized protein family (UPF0203); This family of proteins is functionally ...
 2-68 6.23e-30

Uncharacterized protein family (UPF0203); This family of proteins is functionally uncharacterized.


Pssm-ID: 461604  Cd Length: 69  Bit Score: 100.41  E-value: 6.23e-30
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 186910253   2 NSVGEACTDMKREYDQCFNRWFAEKFLKGDGSGDPCTDLFKRYQQCVQKAIKEKEIP--IEGLEFMGHG 68
Cdd:pfam05254  1 NSLAPECTELKEKYDACFNRWYSEKFLKGKSKENECEDLWKDYQECVQKALKEKGIDklLDEAREEAPF 69
PLN03079 PLN03079
Uncharacterized protein At4g33100; Provisional
 3-57 2.60e-11

Uncharacterized protein At4g33100; Provisional


Pssm-ID: 178628  Cd Length: 91  Bit Score: 53.78  E-value: 2.60e-11
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*
gi 186910253  3 SVGEACTDMKREYDQCFNRWFAEKFLKGDGSGDPCTDLFKRYQQCVQKAIKEKEI 57
Cdd:PLN03079 13 SSTSPCAELRTAYHNCFNRWYSEKFVKGQWDKEDCVAEWHKYRACLSEHLEDKHL 67
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH