|
Name |
Accession |
Description |
Interval |
E-value |
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1450-1699 |
1.05e-74 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
:
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 249.11 E-value: 1.05e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 1450 SPPFEYFIMAMIALNTVVLMMKFYDAPYE-YELMLKCLNIVFTSMFSMECVLKIIAFGV-LNYFRDAWNVFDFVTVLGSI 1527
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEEpLTTVLEILDYVFTGIFTLEMLLKIIAAGFkKRYFRSPWNILDFVVVLPSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 1528 TDILVTEIaetNNFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIALD 1607
Cdd:pfam00520 81 ISLVLSSV---GSLSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKT 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 1608 DDTSINRHNNFRTFLQALMLLFRSATGEAWHEIMLSCLsnracdpnanaSECGSDFAYFYFVSFIFLCSFLMLNLFVAVI 1687
Cdd:pfam00520 158 WENPDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTI-----------DGKGEFWAYIYFVSFIILGGFLLLNLFIAVI 226
|
250
....*....|..
gi 512973306 1688 MDNFEYLTRDSS 1699
Cdd:pfam00520 227 IDNFQELTERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
94-367 |
5.83e-67 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
:
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 226.76 E-value: 5.83e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 94 WPPFEYMILATIIANCIVLALEQHLPDgdKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFVFHkgsYLRNGWNVMDFVV 173
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQP--EEPLTTVLEILDYVFTGIFTLEMLLKIIAAGFKKR---YFRSPWNILDFVV 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 174 VLTGIL----ATAGTDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYMGKF 249
Cdd:pfam00520 76 VLPSLIslvlSSVGSLSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 250 HKacfpnstdadpvgdfpcgkdaparlcegdtecreyWPGPNFGITNFDNILFAILTVFQCITMEGWTDILYNTNDAAGN 329
Cdd:pfam00520 156 KT-----------------------------------WENPDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKGE 200
|
250 260 270
....*....|....*....|....*....|....*...
gi 512973306 330 TWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVE 367
Cdd:pfam00520 201 FWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELTERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
481-720 |
1.72e-56 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
:
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 196.72 E-value: 1.72e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 481 AQSFYWVVLCVVALNTLCVAMVHYNQPQ-RLTTALYFAEFVFLGLFLTEMSLKMYGLGP-RSYFRSSFNCFDFGVIVGSI 558
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEePLTTVLEILDYVFTGIFTLEMLLKIIAAGFkKRYFRSPWNILDFVVVLPSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 559 FEVVWAAIKPGtsFGISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFK 638
Cdd:pfam00520 81 ISLVLSSVGSL--SGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKTW 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 639 DE--TPTTNFDTFPAAILTVFQILTGEDWNAVMYHGIESQGgvskGMFSSFYFIVLTLFGNYTLLNVFLAIAVDNLANAQ 716
Cdd:pfam00520 159 ENpdNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKG----EFWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELT 234
|
....
gi 512973306 717 ELTK 720
Cdd:pfam00520 235 ERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1130-1360 |
6.37e-55 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
:
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 192.10 E-value: 6.37e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 1130 RYFETVILVVIALSSIALAAEDPVRTDSSRNNALKYMDYIFTGVFTFEMVIKMIDLGLLLHpgaYFRDLWNILDFIVVSG 1209
Cdd:pfam00520 2 RYFELFILLLILLNTIFLALETYFQPEEPLTTVLEILDYVFTGIFTLEMLLKIIAAGFKKR---YFRSPWNILDFVVVLP 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 1210 ALVAFAFSGSKGkdINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKFf 1289
Cdd:pfam00520 79 SLISLVLSSVGS--LSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKL- 155
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 512973306 1290 yctdeskelerdcrgqyldyeKEEVEAQPRqwkkyDFHYDNVLWALLTLFTVSTGEGWPMVLKHSVDATYE 1360
Cdd:pfam00520 156 ---------------------KTWENPDNG-----RTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKGE 200
|
|
| Ca_chan_IQ |
pfam08763 |
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular ... |
1772-1849 |
1.36e-41 |
|
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular calcium entry in response to changes in membrane potential. The isoleucine-glutamine (IQ) motif in the voltage gated calcium channel IQ domain interacts with hydrophobic pockets of Ca2+/calmodulin. The interaction regulates two self-regulatory calcium dependent feedback mechanism, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF).
:
Pssm-ID: 462591 Cd Length: 77 Bit Score: 147.74 E-value: 1.36e-41
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 512973306 1772 TSTLMALIRTALEIKLAPAGtKQHQCDAELRKEISSVWANLPQKTLDLLVPPHKPDEMTVGKVYAALMIFDFYKQNKT 1849
Cdd:pfam08763 1 TATLFALIRTSLKIKLAPAG-EMDQADAELRKIIKKIWPRLSQKTLDLLVPPPSDDEMTVGKIYAALLIQDYYRQNKA 77
|
|
| GPHH |
pfam16905 |
Voltage-dependent L-type calcium channel, IQ-associated; GPHH is a sequence motif found in ... |
1708-1761 |
1.34e-31 |
|
Voltage-dependent L-type calcium channel, IQ-associated; GPHH is a sequence motif found in this short domain on voltage-dependent L-type calcium channel proteins in eukaryotes. The domain is closely associated with the IQ-domain, pfam08763.
:
Pssm-ID: 465306 Cd Length: 54 Bit Score: 118.14 E-value: 1.34e-31
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 512973306 1708 EFIRVWAEYDPAACGRISYNDMFEMLKHMSPPLGLGKKCPARVAYKRLVRMNMP 1761
Cdd:pfam16905 1 EFVRVWAEYDPAATGRISYQDMYELLRRISPPLGFGKKCPARVAYKRLVRMNMP 54
|
|
| PHA03247 super family |
cl33720 |
large tegument protein UL36; Provisional |
1964-2288 |
5.70e-07 |
|
large tegument protein UL36; Provisional
The actual alignment was detected with superfamily member PHA03247:
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 55.33 E-value: 5.70e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 1964 DPDGEPQPGLQSQGRAASMPRLAAETQPAPdaSPMKRSISTLAQRPHG-AHLCSAALDRLAPGQVPHHHHHRCHRRRDKK 2042
Cdd:PHA03247 2546 DDAGDPPPPLPPAAPPAAPDRSVPPPRPAP--RPSEPAVTSRARRPDApPQSARPRAPVDDRGDPRGPAPPSPLPPDTHA 2623
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 2043 QKSLEKGPSLSADTDGAPSSTPGPGLA-PGEGPAGCRHERRQgRGRSQERRQPSSSSSEKQRfyscdrfgGREPPQPKPS 2121
Cdd:PHA03247 2624 PDPPPPSPSPAANEPDPHPPPTVPPPErPRDDPAPGRVSRPR-RARRLGRAAQASSPPQRPR--------RRAARPTVGS 2694
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 2122 VSSHPTSPTAGLEPAPAPQGGGSVTGSPLLSTS-------------------GASTPGRGGRRQLPQTPLTPRPSitykT 2182
Cdd:PHA03247 2695 LTSLADPPPPPPTPEPAPHALVSATPLPPGPAAarqaspalpaapappavpaGPATPGGPARPARPPTTAGPPAP----A 2770
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 2183 ANSSPVhfGGAQSSLSAfsPGRLSRGLSEHNALLQRDPLSQPLAPSSRIGSDPylgqrlDSEASAHALPEDTLTFEEAMA 2262
Cdd:PHA03247 2771 PPAAPA--AGPPRRLTR--PAVASLSESRESLPSPWDPADPPAAVLAPAAALP------PAASPAGPLPPPTSAQPTAPP 2840
|
330 340
....*....|....*....|....*.
gi 512973306 2263 SNSGRSSRTSYVSSLTSQSHPLRRVP 2288
Cdd:PHA03247 2841 PPPGPPPPSLPLGGSVAPGGDVRRRP 2866
|
|
| PHA03169 super family |
cl27451 |
hypothetical protein; Provisional |
856-1103 |
2.24e-04 |
|
hypothetical protein; Provisional
The actual alignment was detected with superfamily member PHA03169:
Pssm-ID: 223003 [Multi-domain] Cd Length: 413 Bit Score: 46.12 E-value: 2.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 856 KAPTTLPSASEQAQDQAGAQRADRMDGAEpgaRGEHARPRH-SRSKEATGGQEARGERSRGpeggrrhhrmhrhGPDPSK 934
Cdd:PHA03169 44 AKPAPPAPTTSGPQVRAVAEQGHRQTESD---TETAEESRHgEKEERGQGGPSGSGSESVG-------------SPTPSP 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 935 DKDKDGPVAKGERRARHRGPRAGPKEAESGEEPGrRHRARHKAPPTQEAMEKEGEGPEGDQEVRSRQLKDPPcdleargv 1014
Cdd:PHA03169 108 SGSAEELASGLSPENTSGSSPESPASHSPPPSPP-SHPGPHEPAPPESHNPSPNQQPSSFLQPSHEDSPEEP-------- 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 1015 mgvDPVHALPstclQKVEEQPEDADNQRNVTRMGSQPSDPStavhapvtltDPAGETtavPSGNVDLESQAEGKKEVEAD 1094
Cdd:PHA03169 179 ---EPPTSEP----EPDSPGPPQSETPTSSPPPQSPPDEPG----------EPQSPT---PQQAPSPNTQQAVEHEDEPT 238
|
....*....
gi 512973306 1095 DMLRSGPRP 1103
Cdd:PHA03169 239 EPEREGPPF 247
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1450-1699 |
1.05e-74 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 249.11 E-value: 1.05e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 1450 SPPFEYFIMAMIALNTVVLMMKFYDAPYE-YELMLKCLNIVFTSMFSMECVLKIIAFGV-LNYFRDAWNVFDFVTVLGSI 1527
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEEpLTTVLEILDYVFTGIFTLEMLLKIIAAGFkKRYFRSPWNILDFVVVLPSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 1528 TDILVTEIaetNNFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIALD 1607
Cdd:pfam00520 81 ISLVLSSV---GSLSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKT 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 1608 DDTSINRHNNFRTFLQALMLLFRSATGEAWHEIMLSCLsnracdpnanaSECGSDFAYFYFVSFIFLCSFLMLNLFVAVI 1687
Cdd:pfam00520 158 WENPDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTI-----------DGKGEFWAYIYFVSFIILGGFLLLNLFIAVI 226
|
250
....*....|..
gi 512973306 1688 MDNFEYLTRDSS 1699
Cdd:pfam00520 227 IDNFQELTERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
94-367 |
5.83e-67 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 226.76 E-value: 5.83e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 94 WPPFEYMILATIIANCIVLALEQHLPDgdKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFVFHkgsYLRNGWNVMDFVV 173
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQP--EEPLTTVLEILDYVFTGIFTLEMLLKIIAAGFKKR---YFRSPWNILDFVV 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 174 VLTGIL----ATAGTDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYMGKF 249
Cdd:pfam00520 76 VLPSLIslvlSSVGSLSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 250 HKacfpnstdadpvgdfpcgkdaparlcegdtecreyWPGPNFGITNFDNILFAILTVFQCITMEGWTDILYNTNDAAGN 329
Cdd:pfam00520 156 KT-----------------------------------WENPDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKGE 200
|
250 260 270
....*....|....*....|....*....|....*...
gi 512973306 330 TWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVE 367
Cdd:pfam00520 201 FWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELTERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
481-720 |
1.72e-56 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 196.72 E-value: 1.72e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 481 AQSFYWVVLCVVALNTLCVAMVHYNQPQ-RLTTALYFAEFVFLGLFLTEMSLKMYGLGP-RSYFRSSFNCFDFGVIVGSI 558
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEePLTTVLEILDYVFTGIFTLEMLLKIIAAGFkKRYFRSPWNILDFVVVLPSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 559 FEVVWAAIKPGtsFGISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFK 638
Cdd:pfam00520 81 ISLVLSSVGSL--SGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKTW 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 639 DE--TPTTNFDTFPAAILTVFQILTGEDWNAVMYHGIESQGgvskGMFSSFYFIVLTLFGNYTLLNVFLAIAVDNLANAQ 716
Cdd:pfam00520 159 ENpdNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKG----EFWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELT 234
|
....
gi 512973306 717 ELTK 720
Cdd:pfam00520 235 ERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1130-1360 |
6.37e-55 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 192.10 E-value: 6.37e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 1130 RYFETVILVVIALSSIALAAEDPVRTDSSRNNALKYMDYIFTGVFTFEMVIKMIDLGLLLHpgaYFRDLWNILDFIVVSG 1209
Cdd:pfam00520 2 RYFELFILLLILLNTIFLALETYFQPEEPLTTVLEILDYVFTGIFTLEMLLKIIAAGFKKR---YFRSPWNILDFVVVLP 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 1210 ALVAFAFSGSKGkdINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKFf 1289
Cdd:pfam00520 79 SLISLVLSSVGS--LSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKL- 155
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 512973306 1290 yctdeskelerdcrgqyldyeKEEVEAQPRqwkkyDFHYDNVLWALLTLFTVSTGEGWPMVLKHSVDATYE 1360
Cdd:pfam00520 156 ---------------------KTWENPDNG-----RTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKGE 200
|
|
| Ca_chan_IQ |
pfam08763 |
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular ... |
1772-1849 |
1.36e-41 |
|
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular calcium entry in response to changes in membrane potential. The isoleucine-glutamine (IQ) motif in the voltage gated calcium channel IQ domain interacts with hydrophobic pockets of Ca2+/calmodulin. The interaction regulates two self-regulatory calcium dependent feedback mechanism, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF).
Pssm-ID: 462591 Cd Length: 77 Bit Score: 147.74 E-value: 1.36e-41
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 512973306 1772 TSTLMALIRTALEIKLAPAGtKQHQCDAELRKEISSVWANLPQKTLDLLVPPHKPDEMTVGKVYAALMIFDFYKQNKT 1849
Cdd:pfam08763 1 TATLFALIRTSLKIKLAPAG-EMDQADAELRKIIKKIWPRLSQKTLDLLVPPPSDDEMTVGKIYAALLIQDYYRQNKA 77
|
|
| GPHH |
pfam16905 |
Voltage-dependent L-type calcium channel, IQ-associated; GPHH is a sequence motif found in ... |
1708-1761 |
1.34e-31 |
|
Voltage-dependent L-type calcium channel, IQ-associated; GPHH is a sequence motif found in this short domain on voltage-dependent L-type calcium channel proteins in eukaryotes. The domain is closely associated with the IQ-domain, pfam08763.
Pssm-ID: 465306 Cd Length: 54 Bit Score: 118.14 E-value: 1.34e-31
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 512973306 1708 EFIRVWAEYDPAACGRISYNDMFEMLKHMSPPLGLGKKCPARVAYKRLVRMNMP 1761
Cdd:pfam16905 1 EFVRVWAEYDPAATGRISYQDMYELLRRISPPLGFGKKCPARVAYKRLVRMNMP 54
|
|
| Ca_chan_IQ |
smart01062 |
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular ... |
1827-1857 |
2.59e-10 |
|
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular calcium entry in response to changes in membrane potential. The isoleucine-glutamine (IQ) motif in the voltage gated calcium channel IQ domain interacts with hydrophobic pockets of Ca2+/calmodulin. The interaction regulates two self-regulatory calcium dependent feedback mechanism, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF).
Pssm-ID: 198130 Cd Length: 31 Bit Score: 57.23 E-value: 2.59e-10
10 20 30
....*....|....*....|....*....|.
gi 512973306 1827 DEMTVGKVYAALMIFDFYKQNKTTRDQIHQA 1857
Cdd:smart01062 1 DELTVGKIYAAMLIQDYFRQFKSRKEQELLG 31
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1964-2288 |
5.70e-07 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 55.33 E-value: 5.70e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 1964 DPDGEPQPGLQSQGRAASMPRLAAETQPAPdaSPMKRSISTLAQRPHG-AHLCSAALDRLAPGQVPHHHHHRCHRRRDKK 2042
Cdd:PHA03247 2546 DDAGDPPPPLPPAAPPAAPDRSVPPPRPAP--RPSEPAVTSRARRPDApPQSARPRAPVDDRGDPRGPAPPSPLPPDTHA 2623
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 2043 QKSLEKGPSLSADTDGAPSSTPGPGLA-PGEGPAGCRHERRQgRGRSQERRQPSSSSSEKQRfyscdrfgGREPPQPKPS 2121
Cdd:PHA03247 2624 PDPPPPSPSPAANEPDPHPPPTVPPPErPRDDPAPGRVSRPR-RARRLGRAAQASSPPQRPR--------RRAARPTVGS 2694
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 2122 VSSHPTSPTAGLEPAPAPQGGGSVTGSPLLSTS-------------------GASTPGRGGRRQLPQTPLTPRPSitykT 2182
Cdd:PHA03247 2695 LTSLADPPPPPPTPEPAPHALVSATPLPPGPAAarqaspalpaapappavpaGPATPGGPARPARPPTTAGPPAP----A 2770
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 2183 ANSSPVhfGGAQSSLSAfsPGRLSRGLSEHNALLQRDPLSQPLAPSSRIGSDPylgqrlDSEASAHALPEDTLTFEEAMA 2262
Cdd:PHA03247 2771 PPAAPA--AGPPRRLTR--PAVASLSESRESLPSPWDPADPPAAVLAPAAALP------PAASPAGPLPPPTSAQPTAPP 2840
|
330 340
....*....|....*....|....*.
gi 512973306 2263 SNSGRSSRTSYVSSLTSQSHPLRRVP 2288
Cdd:PHA03247 2841 PPPGPPPPSLPLGGSVAPGGDVRRRP 2866
|
|
| PHA03169 |
PHA03169 |
hypothetical protein; Provisional |
856-1103 |
2.24e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 223003 [Multi-domain] Cd Length: 413 Bit Score: 46.12 E-value: 2.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 856 KAPTTLPSASEQAQDQAGAQRADRMDGAEpgaRGEHARPRH-SRSKEATGGQEARGERSRGpeggrrhhrmhrhGPDPSK 934
Cdd:PHA03169 44 AKPAPPAPTTSGPQVRAVAEQGHRQTESD---TETAEESRHgEKEERGQGGPSGSGSESVG-------------SPTPSP 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 935 DKDKDGPVAKGERRARHRGPRAGPKEAESGEEPGrRHRARHKAPPTQEAMEKEGEGPEGDQEVRSRQLKDPPcdleargv 1014
Cdd:PHA03169 108 SGSAEELASGLSPENTSGSSPESPASHSPPPSPP-SHPGPHEPAPPESHNPSPNQQPSSFLQPSHEDSPEEP-------- 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 1015 mgvDPVHALPstclQKVEEQPEDADNQRNVTRMGSQPSDPStavhapvtltDPAGETtavPSGNVDLESQAEGKKEVEAD 1094
Cdd:PHA03169 179 ---EPPTSEP----EPDSPGPPQSETPTSSPPPQSPPDEPG----------EPQSPT---PQQAPSPNTQQAVEHEDEPT 238
|
....*....
gi 512973306 1095 DMLRSGPRP 1103
Cdd:PHA03169 239 EPEREGPPF 247
|
|
| AF-4 |
pfam05110 |
AF-4 proto-oncoprotein N-terminal region; This family consists of AF4 (Proto-oncogene AF4) and ... |
1964-2129 |
2.83e-03 |
|
AF-4 proto-oncoprotein N-terminal region; This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X E mental retardation syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental retardation. The family also contains a Drosophila AF4 protein homolog Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila.
Pssm-ID: 461550 [Multi-domain] Cd Length: 514 Bit Score: 42.80 E-value: 2.83e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 1964 DPDGEPQPGLQSQGRAASMPRLAAETQPAPDASPMKRSISTLaQRPHGAH--------LCSAALDRLAPGQvphhhhHRC 2035
Cdd:pfam05110 95 DKTSGLPPSFHTSSHSQPMGPPSSSSPSVSSSQSQKKSQART-EPAHGGHsssgsqssQRSQGQSRSKGGQ------ESH 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 2036 HRRRDKKQKSLEKGPSLSADTDGAPSSTPG-PGLAPGEGPAGCRHERRQGrgrsQERRQPSSSSSEKQRFYS---CDR-F 2110
Cdd:pfam05110 168 SSSHHKRQERREDLFSCASLSHSLEELSPLlSSLSSPVKPLSPSHSRQHT----GSKAQNSSDHHGKEYSHSkspRDSeA 243
|
170
....*....|....*....
gi 512973306 2111 GGREPPQPKPSVSSHPTSP 2129
Cdd:pfam05110 244 GSHGPESPSTSLLASSSQL 262
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1450-1699 |
1.05e-74 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 249.11 E-value: 1.05e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 1450 SPPFEYFIMAMIALNTVVLMMKFYDAPYE-YELMLKCLNIVFTSMFSMECVLKIIAFGV-LNYFRDAWNVFDFVTVLGSI 1527
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEEpLTTVLEILDYVFTGIFTLEMLLKIIAAGFkKRYFRSPWNILDFVVVLPSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 1528 TDILVTEIaetNNFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIALD 1607
Cdd:pfam00520 81 ISLVLSSV---GSLSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKT 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 1608 DDTSINRHNNFRTFLQALMLLFRSATGEAWHEIMLSCLsnracdpnanaSECGSDFAYFYFVSFIFLCSFLMLNLFVAVI 1687
Cdd:pfam00520 158 WENPDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTI-----------DGKGEFWAYIYFVSFIILGGFLLLNLFIAVI 226
|
250
....*....|..
gi 512973306 1688 MDNFEYLTRDSS 1699
Cdd:pfam00520 227 IDNFQELTERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
94-367 |
5.83e-67 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 226.76 E-value: 5.83e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 94 WPPFEYMILATIIANCIVLALEQHLPDgdKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFVFHkgsYLRNGWNVMDFVV 173
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQP--EEPLTTVLEILDYVFTGIFTLEMLLKIIAAGFKKR---YFRSPWNILDFVV 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 174 VLTGIL----ATAGTDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYMGKF 249
Cdd:pfam00520 76 VLPSLIslvlSSVGSLSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 250 HKacfpnstdadpvgdfpcgkdaparlcegdtecreyWPGPNFGITNFDNILFAILTVFQCITMEGWTDILYNTNDAAGN 329
Cdd:pfam00520 156 KT-----------------------------------WENPDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKGE 200
|
250 260 270
....*....|....*....|....*....|....*...
gi 512973306 330 TWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVE 367
Cdd:pfam00520 201 FWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELTERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
481-720 |
1.72e-56 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 196.72 E-value: 1.72e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 481 AQSFYWVVLCVVALNTLCVAMVHYNQPQ-RLTTALYFAEFVFLGLFLTEMSLKMYGLGP-RSYFRSSFNCFDFGVIVGSI 558
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEePLTTVLEILDYVFTGIFTLEMLLKIIAAGFkKRYFRSPWNILDFVVVLPSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 559 FEVVWAAIKPGtsFGISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFK 638
Cdd:pfam00520 81 ISLVLSSVGSL--SGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKTW 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 639 DE--TPTTNFDTFPAAILTVFQILTGEDWNAVMYHGIESQGgvskGMFSSFYFIVLTLFGNYTLLNVFLAIAVDNLANAQ 716
Cdd:pfam00520 159 ENpdNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKG----EFWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELT 234
|
....
gi 512973306 717 ELTK 720
Cdd:pfam00520 235 ERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1130-1360 |
6.37e-55 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 192.10 E-value: 6.37e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 1130 RYFETVILVVIALSSIALAAEDPVRTDSSRNNALKYMDYIFTGVFTFEMVIKMIDLGLLLHpgaYFRDLWNILDFIVVSG 1209
Cdd:pfam00520 2 RYFELFILLLILLNTIFLALETYFQPEEPLTTVLEILDYVFTGIFTLEMLLKIIAAGFKKR---YFRSPWNILDFVVVLP 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 1210 ALVAFAFSGSKGkdINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKFf 1289
Cdd:pfam00520 79 SLISLVLSSVGS--LSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKL- 155
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 512973306 1290 yctdeskelerdcrgqyldyeKEEVEAQPRqwkkyDFHYDNVLWALLTLFTVSTGEGWPMVLKHSVDATYE 1360
Cdd:pfam00520 156 ---------------------KTWENPDNG-----RTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKGE 200
|
|
| Ca_chan_IQ |
pfam08763 |
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular ... |
1772-1849 |
1.36e-41 |
|
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular calcium entry in response to changes in membrane potential. The isoleucine-glutamine (IQ) motif in the voltage gated calcium channel IQ domain interacts with hydrophobic pockets of Ca2+/calmodulin. The interaction regulates two self-regulatory calcium dependent feedback mechanism, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF).
Pssm-ID: 462591 Cd Length: 77 Bit Score: 147.74 E-value: 1.36e-41
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 512973306 1772 TSTLMALIRTALEIKLAPAGtKQHQCDAELRKEISSVWANLPQKTLDLLVPPHKPDEMTVGKVYAALMIFDFYKQNKT 1849
Cdd:pfam08763 1 TATLFALIRTSLKIKLAPAG-EMDQADAELRKIIKKIWPRLSQKTLDLLVPPPSDDEMTVGKIYAALLIQDYYRQNKA 77
|
|
| GPHH |
pfam16905 |
Voltage-dependent L-type calcium channel, IQ-associated; GPHH is a sequence motif found in ... |
1708-1761 |
1.34e-31 |
|
Voltage-dependent L-type calcium channel, IQ-associated; GPHH is a sequence motif found in this short domain on voltage-dependent L-type calcium channel proteins in eukaryotes. The domain is closely associated with the IQ-domain, pfam08763.
Pssm-ID: 465306 Cd Length: 54 Bit Score: 118.14 E-value: 1.34e-31
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 512973306 1708 EFIRVWAEYDPAACGRISYNDMFEMLKHMSPPLGLGKKCPARVAYKRLVRMNMP 1761
Cdd:pfam16905 1 EFVRVWAEYDPAATGRISYQDMYELLRRISPPLGFGKKCPARVAYKRLVRMNMP 54
|
|
| PKD_channel |
pfam08016 |
Polycystin cation channel; This family contains the cation channel region from group II of ... |
1473-1692 |
2.75e-11 |
|
Polycystin cation channel; This family contains the cation channel region from group II of Transient receptor potential (TRP) channels, the TRPP subfamily, including PKD1, PKD2, PKD2L and mucolipin proteins.
Pssm-ID: 462341 [Multi-domain] Cd Length: 225 Bit Score: 65.76 E-value: 2.75e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 1473 YDAPYEYELMLkCLNI--VFTSMFSMECVLKIIAFGvLNYFRDAWNVFDFVTVLGSIT--------DILVTE-----IAE 1537
Cdd:pfam08016 2 YVTNRSLFILL-CEIVfvVFFLYFVVEEILKIRKHR-PSYLRSVWNLLDLAIVILSVVlivlniyrDFLADRliksvEAS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 1538 TNNFIN--------------LSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGN 1603
Cdd:pfam08016 80 PVTFIDfdrvaqldnlyriiLAFLVFLTWLKLFKVLRFNKTMSLFTKTLSRAWKDLAGFALMFVIFFFAYAQFGYLLFGT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 1604 ialdddtsinRHNNFRTFLQALMLLFRsatgeawheIMLSCLSNRACDpnanasECGSDFAYFYFVSFIFLCSFLMLNLF 1683
Cdd:pfam08016 160 ----------QAPNFSNFVKSILTLFR---------TILGDFGYNEIF------SGNRVLGPLLFLTFVFLVIFILLNLF 214
|
....*....
gi 512973306 1684 VAVIMDNFE 1692
Cdd:pfam08016 215 LAIINDSYV 223
|
|
| Ca_chan_IQ |
smart01062 |
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular ... |
1827-1857 |
2.59e-10 |
|
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular calcium entry in response to changes in membrane potential. The isoleucine-glutamine (IQ) motif in the voltage gated calcium channel IQ domain interacts with hydrophobic pockets of Ca2+/calmodulin. The interaction regulates two self-regulatory calcium dependent feedback mechanism, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF).
Pssm-ID: 198130 Cd Length: 31 Bit Score: 57.23 E-value: 2.59e-10
10 20 30
....*....|....*....|....*....|.
gi 512973306 1827 DEMTVGKVYAALMIFDFYKQNKTTRDQIHQA 1857
Cdd:smart01062 1 DELTVGKIYAAMLIQDYFRQFKSRKEQELLG 31
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1964-2288 |
5.70e-07 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 55.33 E-value: 5.70e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 1964 DPDGEPQPGLQSQGRAASMPRLAAETQPAPdaSPMKRSISTLAQRPHG-AHLCSAALDRLAPGQVPHHHHHRCHRRRDKK 2042
Cdd:PHA03247 2546 DDAGDPPPPLPPAAPPAAPDRSVPPPRPAP--RPSEPAVTSRARRPDApPQSARPRAPVDDRGDPRGPAPPSPLPPDTHA 2623
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 2043 QKSLEKGPSLSADTDGAPSSTPGPGLA-PGEGPAGCRHERRQgRGRSQERRQPSSSSSEKQRfyscdrfgGREPPQPKPS 2121
Cdd:PHA03247 2624 PDPPPPSPSPAANEPDPHPPPTVPPPErPRDDPAPGRVSRPR-RARRLGRAAQASSPPQRPR--------RRAARPTVGS 2694
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 2122 VSSHPTSPTAGLEPAPAPQGGGSVTGSPLLSTS-------------------GASTPGRGGRRQLPQTPLTPRPSitykT 2182
Cdd:PHA03247 2695 LTSLADPPPPPPTPEPAPHALVSATPLPPGPAAarqaspalpaapappavpaGPATPGGPARPARPPTTAGPPAP----A 2770
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 2183 ANSSPVhfGGAQSSLSAfsPGRLSRGLSEHNALLQRDPLSQPLAPSSRIGSDPylgqrlDSEASAHALPEDTLTFEEAMA 2262
Cdd:PHA03247 2771 PPAAPA--AGPPRRLTR--PAVASLSESRESLPSPWDPADPPAAVLAPAAALP------PAASPAGPLPPPTSAQPTAPP 2840
|
330 340
....*....|....*....|....*.
gi 512973306 2263 SNSGRSSRTSYVSSLTSQSHPLRRVP 2288
Cdd:PHA03247 2841 PPPGPPPPSLPLGGSVAPGGDVRRRP 2866
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1933-2190 |
2.14e-06 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 53.25 E-value: 2.14e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 1933 APLERGHSAEIPVGQRGtLAVDVQMQSAALRDPD--GEPQPGLQSQGRAASMPRL--AAETQPAPDASPM-------KRS 2001
Cdd:PHA03307 155 AGASPAAVASDAASSRQ-AALPLSSPEETARAPSspPAEPPPSTPPAAASPRPPRrsSPISASASSPAPApgrsaadDAG 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 2002 ISTLAQRPHGAHLCSAALDRLAPGQVPHHHHHRCHRRRDK--KQKSLEKGPSLSADTDGAPSSTPGPGlAPGEGPA--GC 2077
Cdd:PHA03307 234 ASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASgwNGPSSRPGPASSSSSPRERSPSPSPS-SPGSGPApsSP 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 2078 RHERRQGRGRSQERRQPSSSS-SEKQRFYSCDRFGGREPPQPKPSVSSHPTSPTAGLEPAPAPQGGGSVTGSPLLSTSGA 2156
Cdd:PHA03307 313 RASSSSSSSRESSSSSTSSSSeSSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRARA 392
|
250 260 270
....*....|....*....|....*....|....
gi 512973306 2157 STPGRGGRRQLPQTPLTPRPSITYKTANSSPVHF 2190
Cdd:PHA03307 393 AVAGRARRRDATGRFPAGRPRPSPLDAGAASGAF 426
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1938-2304 |
6.77e-06 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 51.71 E-value: 6.77e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 1938 GHSAEIPV--GQRGTLAVDVQMQSAALRDPDGEPQPG-----LQSQGRAASMPRL--AAETQPAPDASPMKRSISTLAQR 2008
Cdd:PHA03307 38 GSQGQLVSdsAELAAVTVVAGAAACDRFEPPTGPPPGpgteaPANESRSTPTWSLstLAPASPAREGSPTPPGPSSPDPP 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 2009 PhgahlcsAALDRLAPGQVPHHHHHrchrrrdkkqkslEKGPSLSADTDGAPSSTPGPGLAPGEGPAGCRHERRQGRGRS 2088
Cdd:PHA03307 118 P-------PTPPPASPPPSPAPDLS-------------EMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLS 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 2089 Q-ERRQPSSSSSEKQRFYSCDRFGGREPPQPKPSVSSHPTSPtaglepaPAPQGGGSVTGSPLLSTSGASTPGRGGRRQL 2167
Cdd:PHA03307 178 SpEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASS-------PAPAPGRSAADDAGASSSDSSSSESSGCGWG 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 2168 PQTpLTPRPSITYKTANSSPVHFGGAQSSLSAFSPGRLSRGLSEHNALLQRDPLSQPLAPSSRIGSDPYLGQR---LDSE 2244
Cdd:PHA03307 251 PEN-ECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRessSSST 329
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 512973306 2245 ASAHALPEDTLTFEEAMASNSGRSSRTSYVS--SLTSQSHPLRRVPNGYHCTLGLSTGGRAR 2304
Cdd:PHA03307 330 SSSSESSRGAAVSPGPSPSRSPSPSRPPPPAdpSSPRKRPRPSRAPSSPAASAGRPTRRRAR 391
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1959-2257 |
8.57e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 51.48 E-value: 8.57e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 1959 SAALRDPDGEPQPGLQSQGRA---ASMPRLAAETQPAPDASPMKRSISTL--AQRPHGAHLCSAALDRLAPGQVPHHHhh 2033
Cdd:PHA03247 2769 PAPPAAPAAGPPRRLTRPAVAslsESRESLPSPWDPADPPAAVLAPAAALppAASPAGPLPPPTSAQPTAPPPPPGPP-- 2846
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 2034 rchrrrdkkQKSLEKGPSLSAdtdGAPSSTPGPGLAPGEGPAGCRHERRQGRGRSQERRQPSS---------------SS 2098
Cdd:PHA03247 2847 ---------PPSLPLGGSVAP---GGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESfalppdqperppqpqAP 2914
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 2099 SEKQRFYSCDRFGGREPPQPKPSVSSHPTSPTAGLEPAPAPQGGgsvTGSPLLstsGASTPGRGG--RRQLPQtpltPRP 2176
Cdd:PHA03247 2915 PPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGA---VPQPWL---GALVPGRVAvpRFRVPQ----PAP 2984
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 2177 SITYKTANSSPVHfggaQSSLSAFSPGRLSRGLSEhnallQRDP----LSQPLAPS---------SRIGSDPylgQRLDS 2243
Cdd:PHA03247 2985 SREAPASSTPPLT----GHSLSRVSSWASSLALHE-----ETDPppvsLKQTLWPPddtedsdadSLFDSDS---ERSDL 3052
|
330
....*....|....
gi 512973306 2244 EASAHALPEDTLTF 2257
Cdd:PHA03247 3053 EALDPLPPEPHDPF 3066
|
|
| PHA03169 |
PHA03169 |
hypothetical protein; Provisional |
856-1103 |
2.24e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 223003 [Multi-domain] Cd Length: 413 Bit Score: 46.12 E-value: 2.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 856 KAPTTLPSASEQAQDQAGAQRADRMDGAEpgaRGEHARPRH-SRSKEATGGQEARGERSRGpeggrrhhrmhrhGPDPSK 934
Cdd:PHA03169 44 AKPAPPAPTTSGPQVRAVAEQGHRQTESD---TETAEESRHgEKEERGQGGPSGSGSESVG-------------SPTPSP 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 935 DKDKDGPVAKGERRARHRGPRAGPKEAESGEEPGrRHRARHKAPPTQEAMEKEGEGPEGDQEVRSRQLKDPPcdleargv 1014
Cdd:PHA03169 108 SGSAEELASGLSPENTSGSSPESPASHSPPPSPP-SHPGPHEPAPPESHNPSPNQQPSSFLQPSHEDSPEEP-------- 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 1015 mgvDPVHALPstclQKVEEQPEDADNQRNVTRMGSQPSDPStavhapvtltDPAGETtavPSGNVDLESQAEGKKEVEAD 1094
Cdd:PHA03169 179 ---EPPTSEP----EPDSPGPPQSETPTSSPPPQSPPDEPG----------EPQSPT---PQQAPSPNTQQAVEHEDEPT 238
|
....*....
gi 512973306 1095 DMLRSGPRP 1103
Cdd:PHA03169 239 EPEREGPPF 247
|
|
| PRK12678 |
PRK12678 |
transcription termination factor Rho; Provisional |
822-1001 |
2.75e-04 |
|
transcription termination factor Rho; Provisional
Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 46.05 E-value: 2.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 822 SRDGPRGPTGGKAQSEATEAMDPPRRHHRHRDRDKAPTTLPSASEQAQDQAGAQRADRMDGAEPGARGEHARPRHSRSKE 901
Cdd:PRK12678 79 RAARAAAAARQAEQPAAEAAAAKAEAAPAARAAAAAAAEAASAPEAAQARERRERGEAARRGAARKAGEGGEQPATEARA 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 902 ATGGQEARGERSRGPEggrrhhrmhrhgpdpskdkDKDGPVAKGERRARHRGPRAGPKEAESGEEPGRRHRARHKApptq 981
Cdd:PRK12678 159 DAAERTEEEERDERRR-------------------RGDREDRQAEAERGERGRREERGRDGDDRDRRDRREQGDRR---- 215
|
170 180
....*....|....*....|
gi 512973306 982 eamEKEGEGPEGDQEVRSRQ 1001
Cdd:PRK12678 216 ---EERGRRDGGDRRGRRRR 232
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1959-2286 |
1.28e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 44.39 E-value: 1.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 1959 SAALRDPDGEPqpglqsqGRAASMPRLAAETQPAPDASPMKRSISTLAQRPHGAhlcsAALDRLAPGQVPHHHHHRCHRR 2038
Cdd:PHA03307 755 DALFSNPSLVP-------AKLAEALALLEPAEPQRGAGSSPPVRAEAAFRRPGR----LRRSGPAADAASRTASKRKSRS 823
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 2039 RDKKQKSLEKGPSLSAdtdGAPSSTPGPGLAPGEGPAGcrherRQGRGRSQERRQPSSSSSEKQRfyscdrfggREPPQP 2118
Cdd:PHA03307 824 HTPDGGSESSGPARPP---GAAARPPPARSSESSKSKP-----AAAGGRARGKNGRRRPRPPEPR---------ARPGAA 886
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 2119 KPSVSSHPTSPTAGLEPAPAPQGGGSVTGSPLlstsGASTPGRGGRRQLPQTPLTPRPSityktansspvhfggaQSSLS 2198
Cdd:PHA03307 887 APPKAAAAAPPAGAPAPRPRPAPRVKLGPMPP----GGPDPRGGFRRVPPGDLHTPAPS----------------AAALA 946
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 2199 AFSPGRLSRGLSEHnallqrdplsqPLAPssrigsdpylgqrldsEASAHAlpedtLTFE-EAMAS-----NSGRSSRTS 2272
Cdd:PHA03307 947 AYCPPEVVAELVDH-----------PLFP----------------EPWRPA-----LAFDpEALAEiaarcGGPPPRSGS 994
|
330
....*....|....
gi 512973306 2273 YVSSLTSqSHPLRR 2286
Cdd:PHA03307 995 AFGPLRA-SGPLRR 1007
|
|
| AF-4 |
pfam05110 |
AF-4 proto-oncoprotein N-terminal region; This family consists of AF4 (Proto-oncogene AF4) and ... |
1964-2129 |
2.83e-03 |
|
AF-4 proto-oncoprotein N-terminal region; This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X E mental retardation syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental retardation. The family also contains a Drosophila AF4 protein homolog Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila.
Pssm-ID: 461550 [Multi-domain] Cd Length: 514 Bit Score: 42.80 E-value: 2.83e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 1964 DPDGEPQPGLQSQGRAASMPRLAAETQPAPDASPMKRSISTLaQRPHGAH--------LCSAALDRLAPGQvphhhhHRC 2035
Cdd:pfam05110 95 DKTSGLPPSFHTSSHSQPMGPPSSSSPSVSSSQSQKKSQART-EPAHGGHsssgsqssQRSQGQSRSKGGQ------ESH 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 2036 HRRRDKKQKSLEKGPSLSADTDGAPSSTPG-PGLAPGEGPAGCRHERRQGrgrsQERRQPSSSSSEKQRFYS---CDR-F 2110
Cdd:pfam05110 168 SSSHHKRQERREDLFSCASLSHSLEELSPLlSSLSSPVKPLSPSHSRQHT----GSKAQNSSDHHGKEYSHSkspRDSeA 243
|
170
....*....|....*....
gi 512973306 2111 GGREPPQPKPSVSSHPTSP 2129
Cdd:pfam05110 244 GSHGPESPSTSLLASSSQL 262
|
|
| Hamartin |
pfam04388 |
Hamartin protein; This family includes the hamartin protein which is thought to function as a ... |
2040-2235 |
3.74e-03 |
|
Hamartin protein; This family includes the hamartin protein which is thought to function as a tumour suppressor. The hamartin protein interacts with the tuberin protein pfam03542. Tuberous sclerosis complex (TSC) is an autosomal dominant disorder and is characterized by the presence of hamartomas in many organs, such as brain, skin, heart, lung, and kidney. It is caused by mutation either TSC1 or TSC2 tumour suppressor gene. TSC1 encodes a protein, hamartin, containing two coiled-coil regions, which have been shown to mediate binding to tuberin. The TSC2 gene codes for tuberin pfam03542. These two proteins function within the same pathway(s) regulating cell cycle, cell growth, adhesion, and vesicular trafficking.
Pssm-ID: 461287 [Multi-domain] Cd Length: 730 Bit Score: 42.35 E-value: 3.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 2040 DKKQKSLEKGpSLSADTDgaPSSTPGPGLAPGEGPAGCRH---ERRQGRGRSQERRQPSSSSSEkqrfyscdRFGGREPP 2116
Cdd:pfam04388 259 DPKEASCEEG-YSSSAAD--PTASPYTDQQSSYGSSTSTPsstPRLQLSSSSGTSPPYLSPPSI--------RLKTDSFP 327
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 2117 QPKPSVSSH-PTSPTA-GLEPAPAPQGGGSvtgSPLLSTSGASTPGRGGRRQLPQTPLT-PRPSITYKTANSSPVHfgGA 2193
Cdd:pfam04388 328 LWSPSSVCGmTTPPTSpGMVPTTPSELSPS---SSHLSSRGSSPPEAAGEATPETTPAKdSPYLKQPPPLSDSHVH--RA 402
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 512973306 2194 QSSLSA-FSPGRLSRGLSEHNALLQRdplSQPLAPSSRIGSDP 2235
Cdd:pfam04388 403 LPASSQpSSPPRKDGRSQSSFPPLSK---QAPTNPNSRGLLEP 442
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
801-980 |
7.42e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 41.70 E-value: 7.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 801 TSRHLRPDMKTHLDRPLVVEHSRDGPRGPTGGKAQSEATEAMDPPRRHHRHRDRDKAPTTLPSASEQAQDQAGAQradrm 880
Cdd:PHA03307 197 TPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWE----- 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 881 dgaepGARGEHARPRHSRSKEATGGQEARGE----RSRGPEGGRRHHRMHRHGPDPSKDKDKDGPVAKGER-------RA 949
Cdd:PHA03307 272 -----ASGWNGPSSRPGPASSSSSPRERSPSpspsSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRgaavspgPS 346
|
170 180 190
....*....|....*....|....*....|..
gi 512973306 950 RHRGPRAG-PKEAESGEEPGRRHRARHKAPPT 980
Cdd:PHA03307 347 PSRSPSPSrPPPPADPSSPRKRPRPSRAPSSP 378
|
|
| PRK12678 |
PRK12678 |
transcription termination factor Rho; Provisional |
822-1001 |
8.27e-03 |
|
transcription termination factor Rho; Provisional
Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 41.43 E-value: 8.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 822 SRDGPRGPTGGKAQSEATEAMDPPRRHHRHRDRDKAPTTLPSASEQAQDQAGAQRADRMD-------GAEPGARGEHARP 894
Cdd:PRK12678 81 ARAAAAARQAEQPAAEAAAAKAEAAPAARAAAAAAAEAASAPEAAQARERRERGEAARRGaarkageGGEQPATEARADA 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512973306 895 RHSRSKEATGGQEARGERS-RGPEGGRRHHRMHRHGPDPSKDKDKDGPVAKGERRARHRGPRAGPKEAESGEEPGRRHRA 973
Cdd:PRK12678 161 AERTEEEERDERRRRGDREdRQAEAERGERGRREERGRDGDDRDRRDRREQGDRREERGRRDGGDRRGRRRRRDRRDARG 240
|
170 180
....*....|....*....|....*...
gi 512973306 974 RHKAPPTQEAMEKEGEGPEGDQEVRSRQ 1001
Cdd:PRK12678 241 DDNREDRGDRDGDDGEGRGGRRGRRFRD 268
|
|
| |
