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Conserved domains on  [gi|564342086|ref|XP_006234715|]
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dnaJ homolog subfamily C member 24 isoform X1 [Rattus norvegicus]

Protein Classification

diphthamide biosynthesis protein 4( domain architecture ID 10446362)

diphthamide biosynthesis protein 4 (DPH4) is a J domain-containing CSL-type zinc finger protein that is required for the first step of diphthamide biosynthesis, the transfer of 3-amino-3-carboxypropyl from S-adenosyl-L-methionine to a histidine residue

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 10-78 3.62e-17

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


:

Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 70.58  E-value: 3.62e-17
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 564342086   10 DWYSILGADPSADVSDLKQKYQKLILLYHPDKQSADvpagtmEECVQKFIEIDQAWKILGNEETKKKYD 78
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGD------PEAEEKFKEINEAYEVLSDPEKRAIYD 63
zf-CSL pfam05207
CSL zinc finger; This is a zinc binding motif which contains four cysteine residues which ...
 94-147 2.02e-11

CSL zinc finger; This is a zinc binding motif which contains four cysteine residues which chelate zinc. This domain is often found associated with a pfam00226 domain. This domain is named after the conserved motif of the final cysteine.


:

Pssm-ID: 398744  Cd Length: 55  Bit Score: 55.71  E-value: 2.02e-11
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 564342086   94 AQVHLEEMSWNKDEESFSLSCRCGGKYTVYKDEAQEANLIS-CDTCSLIVELLHQ 147
Cdd:pfam05207   1 DEVELEDFEFDEEEESYYYPCRCGDEFEITEEDLEEGEVVVqCPSCSLWIKVIYD 55
 
Name Accession Description Interval E-value
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 10-78 3.62e-17

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 70.58  E-value: 3.62e-17
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 564342086   10 DWYSILGADPSADVSDLKQKYQKLILLYHPDKQSADvpagtmEECVQKFIEIDQAWKILGNEETKKKYD 78
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGD------PEAEEKFKEINEAYEVLSDPEKRAIYD 63
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 10-70 4.36e-16

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 67.57  E-value: 4.36e-16
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 564342086  10 DWYSILGADPSADVSDLKQKYQKLILLYHPDKQSADvpagtmEECVQKFIEIDQAWKILGN 70
Cdd:cd06257    1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDD------PEAEEKFKEINEAYEVLSD 55
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 10-87 7.12e-16

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 69.35  E-value: 7.12e-16
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 564342086  10 DWYSILGADPSADVSDLKQKYQKLILLYHPDKQSADvpagtmEECVQKFIEIDQAWKILGNEETKKKYDLQRHEDELR 87
Cdd:COG0484    1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGD------PEAEEKFKEINEAYEVLSDPEKRAAYDRFGHAAELL 72
DnaJ smart00271
DnaJ molecular chaperone homology domain;
9-72 2.26e-15

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 65.72  E-value: 2.26e-15
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 564342086     9 KDWYSILGADPSADVSDLKQKYQKLILLYHPDKQSADvpagtMEECVQKFIEIDQAWKILGNEE 72
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGD-----KEEAEEKFKEINEAYEVLSDPE 59
PRK14281 PRK14281
chaperone protein DnaJ; Provisional
 8-78 5.80e-14

chaperone protein DnaJ; Provisional


Pssm-ID: 237657 [Multi-domain]  Cd Length: 397  Bit Score: 67.53  E-value: 5.80e-14
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 564342086   8 KKDWYSILGADPSADVSDLKQKYQKLILLYHPDKQSADvpagtmEECVQKFIEIDQAWKILGNEETKKKYD 78
Cdd:PRK14281   2 KRDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDN------KEAEEHFKEVNEAYEVLSNDDKRRRYD 66
zf-CSL pfam05207
CSL zinc finger; This is a zinc binding motif which contains four cysteine residues which ...
 94-147 2.02e-11

CSL zinc finger; This is a zinc binding motif which contains four cysteine residues which chelate zinc. This domain is often found associated with a pfam00226 domain. This domain is named after the conserved motif of the final cysteine.


Pssm-ID: 398744  Cd Length: 55  Bit Score: 55.71  E-value: 2.02e-11
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 564342086   94 AQVHLEEMSWNKDEESFSLSCRCGGKYTVYKDEAQEANLIS-CDTCSLIVELLHQ 147
Cdd:pfam05207   1 DEVELEDFEFDEEEESYYYPCRCGDEFEITEEDLEEGEVVVqCPSCSLWIKVIYD 55
COG5216 COG5216
Uncharacterized conserved protein [Function unknown];
95-147 2.14e-04

Uncharacterized conserved protein [Function unknown];


Pssm-ID: 227541  Cd Length: 67  Bit Score: 37.51  E-value: 2.14e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 564342086  95 QVHLEEMSWNKDEESFSLSCRCGGKYTVYKDEAQEANLIS-CDTCSLIVELLHQ 147
Cdd:COG5216    6 EIEIEDFTFSREEKTFTYPCPCGDRFEISLEDLRNGEVVArCPSCSLIVCVVYD 59
 
Name Accession Description Interval E-value
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 10-78 3.62e-17

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 70.58  E-value: 3.62e-17
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 564342086   10 DWYSILGADPSADVSDLKQKYQKLILLYHPDKQSADvpagtmEECVQKFIEIDQAWKILGNEETKKKYD 78
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGD------PEAEEKFKEINEAYEVLSDPEKRAIYD 63
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 10-70 4.36e-16

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 67.57  E-value: 4.36e-16
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 564342086  10 DWYSILGADPSADVSDLKQKYQKLILLYHPDKQSADvpagtmEECVQKFIEIDQAWKILGN 70
Cdd:cd06257    1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDD------PEAEEKFKEINEAYEVLSD 55
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 10-87 7.12e-16

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 69.35  E-value: 7.12e-16
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 564342086  10 DWYSILGADPSADVSDLKQKYQKLILLYHPDKQSADvpagtmEECVQKFIEIDQAWKILGNEETKKKYDLQRHEDELR 87
Cdd:COG0484    1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGD------PEAEEKFKEINEAYEVLSDPEKRAAYDRFGHAAELL 72
DnaJ smart00271
DnaJ molecular chaperone homology domain;
9-72 2.26e-15

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 65.72  E-value: 2.26e-15
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 564342086     9 KDWYSILGADPSADVSDLKQKYQKLILLYHPDKQSADvpagtMEECVQKFIEIDQAWKILGNEE 72
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGD-----KEEAEEKFKEINEAYEVLSDPE 59
PRK14281 PRK14281
chaperone protein DnaJ; Provisional
 8-78 5.80e-14

chaperone protein DnaJ; Provisional


Pssm-ID: 237657 [Multi-domain]  Cd Length: 397  Bit Score: 67.53  E-value: 5.80e-14
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 564342086   8 KKDWYSILGADPSADVSDLKQKYQKLILLYHPDKQSADvpagtmEECVQKFIEIDQAWKILGNEETKKKYD 78
Cdd:PRK14281   2 KRDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDN------KEAEEHFKEVNEAYEVLSNDDKRRRYD 66
PRK14283 PRK14283
chaperone protein DnaJ; Provisional
 8-89 1.30e-13

chaperone protein DnaJ; Provisional


Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 66.39  E-value: 1.30e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342086   8 KKDWYSILGADPSADVSDLKQKYQKLILLYHPDkqsadvpAGTMEECVQKFIEIDQAWKILGNEETKKKYDLQRH----- 82
Cdd:PRK14283   4 KRDYYEVLGVDRNADKKEIKKAYRKLARKYHPD-------VSEEEGAEEKFKEISEAYAVLSDDEKRQRYDQFGHagmdg 76

                         90
                 ....*....|
gi 564342086  83 ---EDELRNV 89
Cdd:PRK14283  77 fsqEDIFNNI 86
CbpA COG2214
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
9-81 2.91e-13

Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];


Pssm-ID: 441816 [Multi-domain]  Cd Length: 91  Bit Score: 61.27  E-value: 2.91e-13
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 564342086   9 KDWYSILGADPSADVSDLKQKYQKLILLYHPDKQSADVPAGTmeecvQKFIEIDQAWKILGNEETKKKYDLQR 81
Cdd:COG2214    5 KDHYAVLGVPPDASLEEIRQAYRRLAKLLHPDRGGELKALAE-----ELFQRLNEAYEVLSDPERRAEYDREL 72
PRK14295 PRK14295
molecular chaperone DnaJ;
1-81 3.89e-13

molecular chaperone DnaJ;


Pssm-ID: 237665 [Multi-domain]  Cd Length: 389  Bit Score: 65.26  E-value: 3.89e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342086   1 MAFEQTVKKDWYSILGADPSADVSDLKQKYQKLILLYHPDKQSADVPAgtmEEcvqKFIEIDQAWKILGNEETKKKYDLQ 80
Cdd:PRK14295   1 MSTKDYIEKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKA---EE---RFKEISEAYDVLSDEKKRKEYDEA 74


                 .
gi 564342086  81 R 81
Cdd:PRK14295  75 R 75
PRK14298 PRK14298
chaperone protein DnaJ; Provisional
 6-78 6.31e-13

chaperone protein DnaJ; Provisional


Pssm-ID: 184612 [Multi-domain]  Cd Length: 377  Bit Score: 64.48  E-value: 6.31e-13
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 564342086   6 TVKKDWYSILGADPSADVSDLKQKYQKLILLYHPDKqSADVPAgtmEEcvqKFIEIDQAWKILGNEETKKKYD 78
Cdd:PRK14298   2 ATTRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDK-NKEPDA---EE---KFKEISEAYAVLSDAEKRAQYD 67
PRK14277 PRK14277
chaperone protein DnaJ; Provisional
 8-78 9.51e-13

chaperone protein DnaJ; Provisional


Pssm-ID: 184599 [Multi-domain]  Cd Length: 386  Bit Score: 64.05  E-value: 9.51e-13
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 564342086   8 KKDWYSILGADPSADVSDLKQKYQKLILLYHPDKQSADvpagtmEECVQKFIEIDQAWKILGNEETKKKYD 78
Cdd:PRK14277   4 KKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGD------KEAEQKFKEINEAYEILSDPQKRAQYD 68
DjlA COG1076
DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];
10-68 1.07e-12

DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440694 [Multi-domain]  Cd Length: 75  Bit Score: 59.43  E-value: 1.07e-12
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 564342086  10 DWYSILGADPSADVSDLKQKYQKLILLYHPDKQSADVPAGTMEECVQKFIEIDQAWKIL 68
Cdd:COG1076    5 DAFELLGLPPDADDAELKRAYRKLQREHHPDRLAAGLPEEEQRLALQKAAAINEAYETL 63
PRK14297 PRK14297
molecular chaperone DnaJ;
8-78 5.52e-12

molecular chaperone DnaJ;


Pssm-ID: 184611 [Multi-domain]  Cd Length: 380  Bit Score: 61.72  E-value: 5.52e-12
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 564342086   8 KKDWYSILGADPSADVSDLKQKYQKLILLYHPDKQSADVPAgtmEEcvqKFIEIDQAWKILGNEETKKKYD 78
Cdd:PRK14297   3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEA---EE---KFKEINEAYQVLSDPQKKAQYD 67
PRK10266 PRK10266
curved DNA-binding protein;
9-85 1.46e-11

curved DNA-binding protein;


Pssm-ID: 182347 [Multi-domain]  Cd Length: 306  Bit Score: 60.61  E-value: 1.46e-11
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 564342086   9 KDWYSILGADPSADVSDLKQKYQKLILLYHPD-KQSADVPAgtmeecvqKFIEIDQAWKILGNEETKKKYD-LQRHEDE 85
Cdd:PRK10266   4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDvSKEPDAEA--------RFKEVAEAWEVLSDEQRRAEYDqLWQHRND 74
zf-CSL pfam05207
CSL zinc finger; This is a zinc binding motif which contains four cysteine residues which ...
 94-147 2.02e-11

CSL zinc finger; This is a zinc binding motif which contains four cysteine residues which chelate zinc. This domain is often found associated with a pfam00226 domain. This domain is named after the conserved motif of the final cysteine.


Pssm-ID: 398744  Cd Length: 55  Bit Score: 55.71  E-value: 2.02e-11
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 564342086   94 AQVHLEEMSWNKDEESFSLSCRCGGKYTVYKDEAQEANLIS-CDTCSLIVELLHQ 147
Cdd:pfam05207   1 DEVELEDFEFDEEEESYYYPCRCGDEFEITEEDLEEGEVVVqCPSCSLWIKVIYD 55
PRK14294 PRK14294
chaperone protein DnaJ; Provisional
 7-90 5.14e-11

chaperone protein DnaJ; Provisional


Pssm-ID: 237664 [Multi-domain]  Cd Length: 366  Bit Score: 59.01  E-value: 5.14e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342086   7 VKKDWYSILGADPSADVSDLKQKYQKLILLYHPDKQSADvpagtmEECVQKFIEIDQAWKILGNEETKKKYDLQRHEDeL 86
Cdd:PRK14294   2 VKRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGD------KEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEG-L 74


                 ....
gi 564342086  87 RNVG 90
Cdd:PRK14294  75 SGTG 78
PRK14289 PRK14289
molecular chaperone DnaJ;
6-78 6.73e-11

molecular chaperone DnaJ;


Pssm-ID: 237660 [Multi-domain]  Cd Length: 386  Bit Score: 58.69  E-value: 6.73e-11
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 564342086   6 TVKKDWYSILGADPSADVSDLKQKYQKLILLYHPDKQSADvpagtmEECVQKFIEIDQAWKILGNEETKKKYD 78
Cdd:PRK14289   2 AEKRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGD------KEAEEKFKEAAEAYDVLSDPDKRSRYD 68
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
 7-78 7.46e-11

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 58.65  E-value: 7.46e-11
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 564342086   7 VKKDWYSILGADPSADVSDLKQKYQKLILLYHPDKQSADvpagtMEECVQKFIEIDQAWKILGNEETKKKYD 78
Cdd:PRK14282   2 EKKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPEN-----RKEAEQKFKEIQEAYEVLSDPQKRAMYD 68
PRK14291 PRK14291
chaperone protein DnaJ; Provisional
 8-83 8.66e-11

chaperone protein DnaJ; Provisional


Pssm-ID: 237661 [Multi-domain]  Cd Length: 382  Bit Score: 58.63  E-value: 8.66e-11
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 564342086   8 KKDWYSILGADPSADVSDLKQKYQKLILLYHPDKQSAdvpagtmEECVQKFIEIDQAWKILGNEETKKKYDLQRHE 83
Cdd:PRK14291   2 KKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN-------PEAEEKFKEINEAYQVLSDPEKRKLYDQFGHA 70
PRK14280 PRK14280
molecular chaperone DnaJ;
8-84 1.98e-10

molecular chaperone DnaJ;


Pssm-ID: 237656 [Multi-domain]  Cd Length: 376  Bit Score: 57.42  E-value: 1.98e-10
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 564342086   8 KKDWYSILGADPSADVSDLKQKYQKLILLYHPDKQSAdvpagtmEECVQKFIEIDQAWKILGNEETKKKYDLQRHED 84
Cdd:PRK14280   3 KRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKE-------EGADEKFKEISEAYEVLSDDQKRAQYDQFGHAG 72
PRK14284 PRK14284
chaperone protein DnaJ; Provisional
 10-78 2.42e-10

chaperone protein DnaJ; Provisional


Pssm-ID: 237658 [Multi-domain]  Cd Length: 391  Bit Score: 57.16  E-value: 2.42e-10
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 564342086  10 DWYSILGADPSADVSDLKQKYQKLILLYHPDKQSADVpagtmeECVQKFIEIDQAWKILGNEETKKKYD 78
Cdd:PRK14284   2 DYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDA------EAEKRFKEVSEAYEVLSDAQKRESYD 64
PRK14293 PRK14293
molecular chaperone DnaJ;
10-78 2.89e-10

molecular chaperone DnaJ;


Pssm-ID: 237663 [Multi-domain]  Cd Length: 374  Bit Score: 56.92  E-value: 2.89e-10
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 564342086  10 DWYSILGADPSADVSDLKQKYQKLILLYHPD--KQsadvpAGTMEecvqKFIEIDQAWKILGNEETKKKYD 78
Cdd:PRK14293   4 DYYEILGVSRDADKDELKRAYRRLARKYHPDvnKE-----PGAED----RFKEINRAYEVLSDPETRARYD 65
PRK14287 PRK14287
chaperone protein DnaJ; Provisional
 8-90 3.46e-10

chaperone protein DnaJ; Provisional


Pssm-ID: 237659 [Multi-domain]  Cd Length: 371  Bit Score: 56.56  E-value: 3.46e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342086   8 KKDWYSILGADPSADVSDLKQKYQKLILLYHPDKQSAdvpagtmEECVQKFIEIDQAWKILGNEETKKKYDLQRHEDELR 87
Cdd:PRK14287   3 KRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKA-------PDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDPNQ 75


                 ...
gi 564342086  88 NVG 90
Cdd:PRK14287  76 GFG 78
PRK14285 PRK14285
chaperone protein DnaJ; Provisional
 7-78 1.18e-09

chaperone protein DnaJ; Provisional


Pssm-ID: 172773 [Multi-domain]  Cd Length: 365  Bit Score: 55.38  E-value: 1.18e-09
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 564342086   7 VKKDWYSILGADPSADVSDLKQKYQKLILLYHPDKQSADvpagtmEECVQKFIEIDQAWKILGNEETKKKYD 78
Cdd:PRK14285   1 MKRDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGN------KEAESIFKEATEAYEVLIDDNKRAQYD 66
PRK14301 PRK14301
chaperone protein DnaJ; Provisional
 7-78 1.22e-09

chaperone protein DnaJ; Provisional


Pssm-ID: 237668 [Multi-domain]  Cd Length: 373  Bit Score: 55.13  E-value: 1.22e-09
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 564342086   7 VKKDWYSILGADPSADVSDLKQKYQKLILLYHPDKQSADvpagtmEECVQKFIEIDQAWKILGNEETKKKYD 78
Cdd:PRK14301   2 SQRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDN------PEAEQKFKEAAEAYEVLRDAEKRARYD 67
PRK14300 PRK14300
chaperone protein DnaJ; Provisional
 7-83 1.25e-09

chaperone protein DnaJ; Provisional


Pssm-ID: 172788 [Multi-domain]  Cd Length: 372  Bit Score: 55.02  E-value: 1.25e-09
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 564342086   7 VKKDWYSILGADPSADVSDLKQKYQKLILLYHPDKQSAdvpagtmEECVQKFIEIDQAWKILGNEETKKKYDLQRHE 83
Cdd:PRK14300   1 MSQDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDA-------KDAEKKFKEINAAYDVLKDEQKRAAYDRFGHD 70
PRK14290 PRK14290
chaperone protein DnaJ; Provisional
 9-78 1.82e-09

chaperone protein DnaJ; Provisional


Pssm-ID: 172778 [Multi-domain]  Cd Length: 365  Bit Score: 54.55  E-value: 1.82e-09
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342086   9 KDWYSILGADPSADVSDLKQKYQKLILLYHPDKQsadvpAGTMEECVQKFIEIDQAWKILGNEETKKKYD 78
Cdd:PRK14290   3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLH-----PGNKAEAEEKFKEISEAYEVLSDPQKRRQYD 67
PRK14286 PRK14286
chaperone protein DnaJ; Provisional
 9-78 4.74e-09

chaperone protein DnaJ; Provisional


Pssm-ID: 172774 [Multi-domain]  Cd Length: 372  Bit Score: 53.45  E-value: 4.74e-09
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342086   9 KDWYSILGADPSADVSDLKQKYQKLILLYHPDKQSADvpagtmEECVQKFIEIDQAWKILGNEETKKKYD 78
Cdd:PRK14286   4 RSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGN------KESEEKFKEATEAYEILRDPKKRQAYD 67
PRK14299 PRK14299
chaperone protein DnaJ; Provisional
 8-78 1.26e-08

chaperone protein DnaJ; Provisional


Pssm-ID: 237667 [Multi-domain]  Cd Length: 291  Bit Score: 52.25  E-value: 1.26e-08
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 564342086   8 KKDWYSILGADPSADVSDLKQKYQKLILLYHPDKQSAdvpagtmEECVQKFIEIDQAWKILGNEETKKKYD 78
Cdd:PRK14299   3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKS-------PGAEEKFKEINEAYTVLSDPEKRRIYD 66
PRK14292 PRK14292
chaperone protein DnaJ; Provisional
 10-78 1.37e-08

chaperone protein DnaJ; Provisional


Pssm-ID: 237662 [Multi-domain]  Cd Length: 371  Bit Score: 52.20  E-value: 1.37e-08
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 564342086  10 DWYSILGADPSADVSDLKQKYQKLILLYHPDKQsadvPAGTMEEcvqKFIEIDQAWKILGNEETKKKYD 78
Cdd:PRK14292   3 DYYELLGVSRTASADEIKSAYRKLALKYHPDRN----KEKGAAE---KFAQINEAYAVLSDAEKRAHYD 64
PRK14279 PRK14279
molecular chaperone DnaJ;
1-81 2.84e-08

molecular chaperone DnaJ;


Pssm-ID: 237655 [Multi-domain]  Cd Length: 392  Bit Score: 51.27  E-value: 2.84e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342086   1 MAFEQTVKKDWYSILGADPSADVSDLKQKYQKLILLYHPDKQSADVPAGtmeecvQKFIEIDQAWKILGNEETKKKYDLQ 80
Cdd:PRK14279   1 MAQREWVEKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAE------ERFKAVSEAHDVLSDPAKRKEYDET 74


                 .
gi 564342086  81 R 81
Cdd:PRK14279  75 R 75
PRK14296 PRK14296
chaperone protein DnaJ; Provisional
 8-78 7.42e-08

chaperone protein DnaJ; Provisional


Pssm-ID: 237666 [Multi-domain]  Cd Length: 372  Bit Score: 49.95  E-value: 7.42e-08
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 564342086   8 KKDWYSILGADPSADVSDLKQKYQKLILLYHPD-KQSADVPagtmeecvQKFIEIDQAWKILGNEETKKKYD 78
Cdd:PRK14296   3 KKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDlNKSPDAH--------DKMVEINEAADVLLDKDKRKQYD 66
PRK14278 PRK14278
chaperone protein DnaJ; Provisional
 9-79 3.00e-07

chaperone protein DnaJ; Provisional


Pssm-ID: 237654 [Multi-domain]  Cd Length: 378  Bit Score: 48.12  E-value: 3.00e-07
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 564342086   9 KDWYSILGADPSADVSDLKQKYQKLILLYHPDKQSAdvpagtmEECVQKFIEIDQAWKILGNEETKKKYDL 79
Cdd:PRK14278   3 RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPD-------EEAQEKFKEISVAYEVLSDPEKRRIVDL 66
PTZ00037 PTZ00037
DnaJ_C chaperone protein; Provisional
 9-94 7.38e-07

DnaJ_C chaperone protein; Provisional


Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 47.12  E-value: 7.38e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564342086   9 KDWYSILGADPSADVSDLKQKYQKLILLYHPDKqsadvpAGTMEecvqKFIEIDQAWKILGNEETKKKYDLQRHEDELRN 88
Cdd:PTZ00037  28 EKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDK------GGDPE----KFKEISRAYEVLSDPEKRKIYDEYGEEGLEGG 97


                 ....*.
gi 564342086  89 VGPVDA 94
Cdd:PTZ00037  98 EQPADA 103
PRK14276 PRK14276
chaperone protein DnaJ; Provisional
 8-78 2.13e-06

chaperone protein DnaJ; Provisional


Pssm-ID: 237653 [Multi-domain]  Cd Length: 380  Bit Score: 45.85  E-value: 2.13e-06
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 564342086   8 KKDWYSILGADPSADVSDLKQKYQKLILLYHPDKQSAdvpAGTMEecvqKFIEIDQAWKILGNEETKKKYD 78
Cdd:PRK14276   3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKE---PGAEE----KYKEVQEAYETLSDPQKRAAYD 66
PRK14288 PRK14288
molecular chaperone DnaJ;
11-78 1.02e-05

molecular chaperone DnaJ;


Pssm-ID: 172776 [Multi-domain]  Cd Length: 369  Bit Score: 43.91  E-value: 1.02e-05
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 564342086  11 WYSILGADPSADVSDLKQKYQKLILLYHPDKQSADvpagtmEECVQKFIEIDQAWKILGNEETKKKYD 78
Cdd:PRK14288   5 YYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGD------KEAEEKFKLINEAYGVLSDEKKRALYD 66
PTZ00341 PTZ00341
Ring-infected erythrocyte surface antigen; Provisional
 11-78 1.30e-05

Ring-infected erythrocyte surface antigen; Provisional


Pssm-ID: 173534 [Multi-domain]  Cd Length: 1136  Bit Score: 43.62  E-value: 1.30e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 564342086   11 WYSILGADPSADVSDLKQKYQKLILLYHPDKQSADvpagtmeECVQKFIEIDQAWKILGNEETKKKYD 78
Cdd:PTZ00341  575 FYDILGVGVNADMKEISERYFKLAENYYPPKRSGN-------EGFHKFKKINEAYQILGDIDKKKMYN 635
djlA PRK09430
co-chaperone DjlA;
9-65 1.22e-04

co-chaperone DjlA;


Pssm-ID: 236512 [Multi-domain]  Cd Length: 267  Bit Score: 40.57  E-value: 1.22e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 564342086   9 KDWYSILGADPSADVSDLKQKYQKLILLYHPDKQSAD-VPAGTMEECVQKFIEIDQAW 65
Cdd:PRK09430 200 EDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKgLPPEMMEMAKEKAQEIQAAY 257
COG5216 COG5216
Uncharacterized conserved protein [Function unknown];
95-147 2.14e-04

Uncharacterized conserved protein [Function unknown];


Pssm-ID: 227541  Cd Length: 67  Bit Score: 37.51  E-value: 2.14e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 564342086  95 QVHLEEMSWNKDEESFSLSCRCGGKYTVYKDEAQEANLIS-CDTCSLIVELLHQ 147
Cdd:COG5216    6 EIEIEDFTFSREEKTFTYPCPCGDRFEISLEDLRNGEVVArCPSCSLIVCVVYD 59
ZUO1 COG5269
Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / ...
 8-78 5.98e-03

Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227594 [Multi-domain]  Cd Length: 379  Bit Score: 35.78  E-value: 5.98e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 564342086   8 KKDWYSILGADP---SADVSDLKQKYQKLILLYHPDKQSadvpAGTMEECVQKFIEIDQAWKILGNEETKKKYD 78
Cdd:COG5269   42 KVDLYALLGLSKyrtKAIPPQILKAHKKKVYKYHPDKTA----AGGNKGCDEFFKLIQKAREVLGDRKLRLQYD 111
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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