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Conserved domains on  [gi|564345630|ref|XP_006236094|]
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metalloreductase STEAP2 isoform X1 [Rattus norvegicus]

Protein Classification

COG2085 and Ferric_reduct domain-containing protein( domain architecture ID 11946522)

COG2085 and Ferric_reduct domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
COG2085 COG2085
Predicted dinucleotide-binding enzyme [General function prediction only];
32-221 1.46e-35

Predicted dinucleotide-binding enzyme [General function prediction only];


:

Pssm-ID: 441688 [Multi-domain]  Cd Length: 205  Bit Score: 131.06  E-value: 1.46e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564345630  32 VGVIGSGDFAKSLTIRLIRCGYHVVIGSRNP----KFASEFFPHVVDVThHEDALTKTNIIFVAIHREHYTS-LWDLRHL 106
Cdd:COG2085    1 IGIIGTGNIGSALARRLAAAGHEVVIGSRDPekaaALAAELGPGARAGT-NAEAAAAADVVVLAVPYEAVPDvLESLGDA 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564345630 107 LVGKVLIDVSNNMRVNQYP-------ESNAEYLASLFPDSLIVKGFNVISAWALQLGPKDAS--RQVYICSNNIQARQQV 177
Cdd:COG2085   80 LAGKIVIDATNPLPERDGFildppggGSAAELVAALLPGARVVKAFNTIGAAVLADPARPAGgrRDVFVAGDDAEAKAVV 159

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 564345630 178 IELARQLNFIPVDLGSLSSAKEIENL-PLRLFTLWRGPVVVAISL 221
Cdd:COG2085  160 AALIEDLGFDPVDAGPLANARRLEPLtPLLINLARTAGLELGFRL 204
Ferric_reduct pfam01794
Ferric reductase like transmembrane component; This family includes a common region in the ...
 258-405 3.72e-09

Ferric reductase like transmembrane component; This family includes a common region in the transmembrane proteins mammalian cytochrome B-245 heavy chain (gp91-phox), ferric reductase transmembrane component in yeast and respiratory burst oxidase from mouse-ear cress. This may be a family of flavocytochromes capable of moving electrons across the plasma membrane. The Frp1 protein from S. pombe is a ferric reductase component and is required for cell surface ferric reductase activity, mutants in frp1 are deficient in ferric iron uptake. Cytochrome B-245 heavy chain is a FAD-dependent dehydrogenase it is also has electron transferase activity which reduces molecular oxygen to superoxide anion, a precursor in the production of microbicidal oxidants. Mutations in the sequence of cytochrome B-245 heavy chain (gp91-phox) lead to the X-linked chronic granulomatous disease. The bacteriocidal ability of phagocytic cells is reduced and is characterized by the absence of a functional plasma membrane associated NADPH oxidase. The chronic granulomatous disease gene codes for the beta chain of cytochrome B-245 and cytochrome B-245 is missing from patients with the disease.


:

Pssm-ID: 426438 [Multi-domain]  Cd Length: 121  Bit Score: 54.58  E-value: 3.72e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564345630  258 LPIVAITLLSLVYLAGLLAAAYQLYYGTKYrrfppwlDTWLQCRKQLGLLSFFFAVVHVAYSLCLPMRRSERYLFlnmay 337
Cdd:pfam01794   1 LGILALALLPLLLLLALRNNPLEWLTGLSY-------DRLLLFHRWLGRLAFLLALLHVILYLIYWLRFSLEGIL----- 68

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 564345630  338 qqvhanienawneeEVWRIEMYISFGIMSLGLLSLLAVTSIPSVSNaLNWREFSFIQSTLGYVALLIT 405
Cdd:pfam01794  69 --------------DLLLKRPYNILGIIALVLLVLLAITSLPPFRR-LSYELFLYLHILLAVAFLLLV 121
 
Name Accession Description Interval E-value
COG2085 COG2085
Predicted dinucleotide-binding enzyme [General function prediction only];
32-221 1.46e-35

Predicted dinucleotide-binding enzyme [General function prediction only];


Pssm-ID: 441688 [Multi-domain]  Cd Length: 205  Bit Score: 131.06  E-value: 1.46e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564345630  32 VGVIGSGDFAKSLTIRLIRCGYHVVIGSRNP----KFASEFFPHVVDVThHEDALTKTNIIFVAIHREHYTS-LWDLRHL 106
Cdd:COG2085    1 IGIIGTGNIGSALARRLAAAGHEVVIGSRDPekaaALAAELGPGARAGT-NAEAAAAADVVVLAVPYEAVPDvLESLGDA 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564345630 107 LVGKVLIDVSNNMRVNQYP-------ESNAEYLASLFPDSLIVKGFNVISAWALQLGPKDAS--RQVYICSNNIQARQQV 177
Cdd:COG2085   80 LAGKIVIDATNPLPERDGFildppggGSAAELVAALLPGARVVKAFNTIGAAVLADPARPAGgrRDVFVAGDDAEAKAVV 159

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 564345630 178 IELARQLNFIPVDLGSLSSAKEIENL-PLRLFTLWRGPVVVAISL 221
Cdd:COG2085  160 AALIEDLGFDPVDAGPLANARRLEPLtPLLINLARTAGLELGFRL 204
F420_oxidored pfam03807
NADP oxidoreductase coenzyme F420-dependent;
33-118 1.26e-19

NADP oxidoreductase coenzyme F420-dependent;


Pssm-ID: 397743 [Multi-domain]  Cd Length: 92  Bit Score: 83.44  E-value: 1.26e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564345630   33 GVIGSGDFAKSLTIRLIRCGYH--VVIGSRNPKFASEFFPHV-VDVTH--HEDALTKTNIIFVAIHREHYTSLW-DLRHL 106
Cdd:pfam03807   1 GFIGAGNMGEALARGLVAAGPHevVVANSRNPEKAEELAEEYgVGATAvdNEEAAEEADVVFLAVKPEDAPDVLsELSDL 80

                          90
                  ....*....|..
gi 564345630  107 LVGKVLIDVSNN 118
Cdd:pfam03807  81 LKGKIVISIAAG 92
Ferric_reduct pfam01794
Ferric reductase like transmembrane component; This family includes a common region in the ...
 258-405 3.72e-09

Ferric reductase like transmembrane component; This family includes a common region in the transmembrane proteins mammalian cytochrome B-245 heavy chain (gp91-phox), ferric reductase transmembrane component in yeast and respiratory burst oxidase from mouse-ear cress. This may be a family of flavocytochromes capable of moving electrons across the plasma membrane. The Frp1 protein from S. pombe is a ferric reductase component and is required for cell surface ferric reductase activity, mutants in frp1 are deficient in ferric iron uptake. Cytochrome B-245 heavy chain is a FAD-dependent dehydrogenase it is also has electron transferase activity which reduces molecular oxygen to superoxide anion, a precursor in the production of microbicidal oxidants. Mutations in the sequence of cytochrome B-245 heavy chain (gp91-phox) lead to the X-linked chronic granulomatous disease. The bacteriocidal ability of phagocytic cells is reduced and is characterized by the absence of a functional plasma membrane associated NADPH oxidase. The chronic granulomatous disease gene codes for the beta chain of cytochrome B-245 and cytochrome B-245 is missing from patients with the disease.


Pssm-ID: 426438 [Multi-domain]  Cd Length: 121  Bit Score: 54.58  E-value: 3.72e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564345630  258 LPIVAITLLSLVYLAGLLAAAYQLYYGTKYrrfppwlDTWLQCRKQLGLLSFFFAVVHVAYSLCLPMRRSERYLFlnmay 337
Cdd:pfam01794   1 LGILALALLPLLLLLALRNNPLEWLTGLSY-------DRLLLFHRWLGRLAFLLALLHVILYLIYWLRFSLEGIL----- 68

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 564345630  338 qqvhanienawneeEVWRIEMYISFGIMSLGLLSLLAVTSIPSVSNaLNWREFSFIQSTLGYVALLIT 405
Cdd:pfam01794  69 --------------DLLLKRPYNILGIIALVLLVLLAITSLPPFRR-LSYELFLYLHILLAVAFLLLV 121
PRK05419 PRK05419
protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;
297-379 6.71e-03

protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;


Pssm-ID: 235452  Cd Length: 205  Bit Score: 37.92  E-value: 6.71e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564345630 297 WLQCRKQLGLLSFFFAVVHVAyslclpmrrseRYLFLNMAYqqvhanienAWN---EEEVWRieMYISFGIMSLGLLSLL 373
Cdd:PRK05419  73 LIRTRRLLGLWAFFYATLHLL-----------SYLLLDLGL---------DWSllgKEIVKR--PYITVGMAAFLILLPL 130


                 ....*.
gi 564345630 374 AVTSIP 379
Cdd:PRK05419 131 ALTSTR 136
 
Name Accession Description Interval E-value
COG2085 COG2085
Predicted dinucleotide-binding enzyme [General function prediction only];
32-221 1.46e-35

Predicted dinucleotide-binding enzyme [General function prediction only];


Pssm-ID: 441688 [Multi-domain]  Cd Length: 205  Bit Score: 131.06  E-value: 1.46e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564345630  32 VGVIGSGDFAKSLTIRLIRCGYHVVIGSRNP----KFASEFFPHVVDVThHEDALTKTNIIFVAIHREHYTS-LWDLRHL 106
Cdd:COG2085    1 IGIIGTGNIGSALARRLAAAGHEVVIGSRDPekaaALAAELGPGARAGT-NAEAAAAADVVVLAVPYEAVPDvLESLGDA 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564345630 107 LVGKVLIDVSNNMRVNQYP-------ESNAEYLASLFPDSLIVKGFNVISAWALQLGPKDAS--RQVYICSNNIQARQQV 177
Cdd:COG2085   80 LAGKIVIDATNPLPERDGFildppggGSAAELVAALLPGARVVKAFNTIGAAVLADPARPAGgrRDVFVAGDDAEAKAVV 159

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 564345630 178 IELARQLNFIPVDLGSLSSAKEIENL-PLRLFTLWRGPVVVAISL 221
Cdd:COG2085  160 AALIEDLGFDPVDAGPLANARRLEPLtPLLINLARTAGLELGFRL 204
F420_oxidored pfam03807
NADP oxidoreductase coenzyme F420-dependent;
33-118 1.26e-19

NADP oxidoreductase coenzyme F420-dependent;


Pssm-ID: 397743 [Multi-domain]  Cd Length: 92  Bit Score: 83.44  E-value: 1.26e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564345630   33 GVIGSGDFAKSLTIRLIRCGYH--VVIGSRNPKFASEFFPHV-VDVTH--HEDALTKTNIIFVAIHREHYTSLW-DLRHL 106
Cdd:pfam03807   1 GFIGAGNMGEALARGLVAAGPHevVVANSRNPEKAEELAEEYgVGATAvdNEEAAEEADVVFLAVKPEDAPDVLsELSDL 80

                          90
                  ....*....|..
gi 564345630  107 LVGKVLIDVSNN 118
Cdd:pfam03807  81 LKGKIVISIAAG 92
Ferric_reduct pfam01794
Ferric reductase like transmembrane component; This family includes a common region in the ...
 258-405 3.72e-09

Ferric reductase like transmembrane component; This family includes a common region in the transmembrane proteins mammalian cytochrome B-245 heavy chain (gp91-phox), ferric reductase transmembrane component in yeast and respiratory burst oxidase from mouse-ear cress. This may be a family of flavocytochromes capable of moving electrons across the plasma membrane. The Frp1 protein from S. pombe is a ferric reductase component and is required for cell surface ferric reductase activity, mutants in frp1 are deficient in ferric iron uptake. Cytochrome B-245 heavy chain is a FAD-dependent dehydrogenase it is also has electron transferase activity which reduces molecular oxygen to superoxide anion, a precursor in the production of microbicidal oxidants. Mutations in the sequence of cytochrome B-245 heavy chain (gp91-phox) lead to the X-linked chronic granulomatous disease. The bacteriocidal ability of phagocytic cells is reduced and is characterized by the absence of a functional plasma membrane associated NADPH oxidase. The chronic granulomatous disease gene codes for the beta chain of cytochrome B-245 and cytochrome B-245 is missing from patients with the disease.


Pssm-ID: 426438 [Multi-domain]  Cd Length: 121  Bit Score: 54.58  E-value: 3.72e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564345630  258 LPIVAITLLSLVYLAGLLAAAYQLYYGTKYrrfppwlDTWLQCRKQLGLLSFFFAVVHVAYSLCLPMRRSERYLFlnmay 337
Cdd:pfam01794   1 LGILALALLPLLLLLALRNNPLEWLTGLSY-------DRLLLFHRWLGRLAFLLALLHVILYLIYWLRFSLEGIL----- 68

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 564345630  338 qqvhanienawneeEVWRIEMYISFGIMSLGLLSLLAVTSIPSVSNaLNWREFSFIQSTLGYVALLIT 405
Cdd:pfam01794  69 --------------DLLLKRPYNILGIIALVLLVLLAITSLPPFRR-LSYELFLYLHILLAVAFLLLV 121
PRK05419 PRK05419
protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;
297-379 6.71e-03

protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;


Pssm-ID: 235452  Cd Length: 205  Bit Score: 37.92  E-value: 6.71e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564345630 297 WLQCRKQLGLLSFFFAVVHVAyslclpmrrseRYLFLNMAYqqvhanienAWN---EEEVWRieMYISFGIMSLGLLSLL 373
Cdd:PRK05419  73 LIRTRRLLGLWAFFYATLHLL-----------SYLLLDLGL---------DWSllgKEIVKR--PYITVGMAAFLILLPL 130


                 ....*.
gi 564345630 374 AVTSIP 379
Cdd:PRK05419 131 ALTSTR 136
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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