|
Name |
Accession |
Description |
Interval |
E-value |
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
328-769 |
1.89e-15 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 82.29 E-value: 1.89e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 328 PVTVTPETVSRSTKPTLASALDTAETALVLSEKTPETAQSVLIPESELLLSSLAPKGSPEfpeaktafPSEKPGGSLASS 407
Cdd:PHA03247 2575 PRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPA--------ANEPDPHPPPTV 2646
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 408 EEPWVVPGAktSEDSRVVQPRTATYDVVSSSATSD---------ETEVEPHTATSDPILDSVPPKTSRTAEQPRATLAPS 478
Cdd:PHA03247 2647 PPPERPRDD--PAPGRVSRPRRARRLGRAAQASSPpqrprrraaRPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPG 2724
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 479 EASFDPRTVEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQSTKAPPHKTKkpgrrrPKTTRS 558
Cdd:PHA03247 2725 PAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLS------ESRESL 2798
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 559 PEVPKSKPALEPATVPPEILVPTIVPKPPQRPKATRRPEAPQIQPAHEPVTF---GSEAPAlaivtttdiAPVISRTKAS 635
Cdd:PHA03247 2799 PSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLplgGSVAPG---------GDVRRRPPSR 2869
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 636 VTTLAP-KSSRPRTRQRPKYKATPSPKiPQTKPAPRQTTSPPPKLkPPHSRRPAKEQVPKGSLHTTSKPKMPPSPEVVDI 714
Cdd:PHA03247 2870 SPAAKPaAPARPPVRRLARPAVSRSTE-SFALPPDQPERPPQPQA-PPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTT 2947
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 564376561 715 TSVPKDEQLSHKPDPEVSQSETVLPPVTFRVEPPkttivPLETRDIPLIPVISPR 769
Cdd:PHA03247 2948 DPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQ-----PAPSREAPASSTPPLT 2997
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1018-1109 |
9.44e-11 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 59.43 E-value: 9.44e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 1018 NPPTNLTVVTVEgcPSFVILDWEKPLNDT--VTEYEVISRENGSFSGKNKSIQITNQTFSTVENLKPDTSYEFQVKPKNP 1095
Cdd:cd00063 2 SPPTNLRVTDVT--STSVTLSWTPPEDDGgpITGYVVEYREKGSGDWKEVEVTPGSETSYTLTGLKPGTEYEFRVRAVNG 79
|
90
....*....|....
gi 564376561 1096 LGEGPASNTVAFST 1109
Cdd:cd00063 80 GGESPPSESVTVTT 93
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
504-912 |
1.88e-08 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 59.01 E-value: 1.88e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 504 QTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQSTKAPPHKTKKPGRRRPKTTRSPEVPKSkpalepaTVPPEILVPTIV 583
Cdd:pfam03154 163 QQQILQTQPPVLQAQSGAASPPSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNQTQS-------TAAPHTLIQQTP 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 584 PKPPQRPKATRRPEAPQIQPAHEPVTFGSEAPALAIVTTTDIAPVISRTKAS-VTTLAPKSSRPRTRQRPKYKATPSPKI 662
Cdd:pfam03154 236 TLHPQRLPSPHPPLQPMTQPPPPSQVSPQPLPQPSLHGQMPPMPHSLQTGPShMQHPVPPQPFPLTPQSSQSQVPPGPSP 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 663 PQTKPAPRQTTSPPPKLKPPHSRRPAKEQVPKGSLhTTSKPKMPPSPEVVDITSVPKDEQLSHKPDPEVSQSETVLPPvt 742
Cdd:pfam03154 316 AAPGQSQQRIHTPPSQSQLQSQQPPREQPLPPAPL-SMPHIKPPPTTPIPQLPNPQSHKHPPHLSGPSPFQMNSNLPP-- 392
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 743 frvEPPKTTIVPLETRDIPLI--PVISPRPSEEELQTTMEQTDQSTQelfTTKIPRTTELAKTTQAPHRLHTTPVRPRIP 820
Cdd:pfam03154 393 ---PPALKPLSSLSTHHPPSAhpPPLQLMPQSQQLPPPPAQPPVLTQ---SQSLPPPAASHPPTSGLHQVPSQSPFPQHP 466
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 821 ERPHGRPALNKTTTRPDRTKSrgmshkngVGPGTKQ-TPKPSSTGRNTSVDSHATRKPGLIPGTRHRHTS--PRPVPPQR 897
Cdd:pfam03154 467 FVPGGPPPITPPSGPPTSTSS--------AMPGIQPpSSASVSSSGPVPAAVSCPLPPVQIKEEALDEAEepESPPPPPR 538
|
410
....*....|....*
gi 564376561 898 KPLPPNNVTGKPGSA 912
Cdd:pfam03154 539 SPSPEPTVVNTPSHA 553
|
|
| FN3 |
smart00060 |
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1019-1099 |
3.78e-08 |
|
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 51.85 E-value: 3.78e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 1019 PPTNLTVVTVEgcPSFVILDWEKPLNDTVTEYEV-ISRENGSFSGKNKSIQITNQTFS-TVENLKPDTSYEFQVKPKNPL 1096
Cdd:smart00060 3 PPSNLRVTDVT--STSVTLSWEPPPDDGITGYIVgYRVEYREEGSEWKEVNVTPSSTSyTLTGLKPGTEYEFRVRAVNGA 80
|
...
gi 564376561 1097 GEG 1099
Cdd:smart00060 81 GEG 83
|
|
| fn3 |
pfam00041 |
Fibronectin type III domain; |
1019-1102 |
6.22e-07 |
|
Fibronectin type III domain;
Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 48.57 E-value: 6.22e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 1019 PPTNLTVVTVEgcPSFVILDWEKP--LNDTVTEYEVISRENGSFSGKNkSIQITNQTFS-TVENLKPDTSYEFQVKPKNP 1095
Cdd:pfam00041 2 APSNLTVTDVT--STSLTVSWTPPpdGNGPITGYEVEYRPKNSGEPWN-EITVPGTTTSvTLTGLKPGTEYEVRVQAVNG 78
|
....*..
gi 564376561 1096 LGEGPAS 1102
Cdd:pfam00041 79 GGEGPPS 85
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
667-970 |
3.31e-06 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 51.61 E-value: 3.31e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 667 PAPRQTTSPPPKlKPPHSRRPAKEQVPKGSLHTTSKPKMPPSPevvditsvpKDEQLSHKPDPEVSQSETVLPPVTFRVE 746
Cdd:PTZ00449 511 PEGPEASGLPPK-APGDKEGEEGEHEDSKESDEPKEGGKPGET---------KEGEVGKKPGPAKEHKPSKIPTLSKKPE 580
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 747 PPKTTIVPLETRdiplipviSPRPSEEELQTTMEQTDQSTQELFTTKIPRTTELAKTTQAPHRlHTTPVRPRIPERPHGr 826
Cdd:PTZ00449 581 FPKDPKHPKDPE--------EPKKPKRPRSAQRPTRPKSPKLPELLDIPKSPKRPESPKSPKR-PPPPQRPSSPERPEG- 650
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 827 PALNKTTTRPDRTKS------RGMSHKNGVGPGTKQTPKPSSTGRNTSVDSHATRKPGLIPGTRHrhTSPRPVPPQRKPL 900
Cdd:PTZ00449 651 PKIIKSPKPPKSPKPpfdpkfKEKFYDDYLDAAAKSKETKTTVVLDESFESILKETLPETPGTPF--TTPRPLPPKLPRD 728
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 564376561 901 P--PNNVTGKPGSAGIISSSRATSPPLKAT-LKPTGTATERPGA---EKKQPTAPASEEEFGNTTDFSSSPTKETD 970
Cdd:PTZ00449 729 EefPFEPIGDPDAEQPDDIEFFTPPEEERTfFHETPADTPLPDIlaeEFKEEDIHAETGEPDEAMKRPDSPSEHED 804
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
493-710 |
1.39e-05 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 49.38 E-value: 1.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 493 PEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQSTKAPPHKTKKPGRRRPKTTRSPEVPKSKPALEPAT 572
Cdd:NF033839 292 PSAPKPGMQPSPQPEKKEVKPEPETPKPEVKPQLEKPKPEVKPQPEKPKPEVKPQLETPKPEVKPQPEKPKPEVKPQPEK 371
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 573 VPPEilvptiVPKPPQRPKATRRPEAPQIQPAHEPvtfgseapalaivtttdiAPVISRTKASVTTLAPKSSRPRTRQRP 652
Cdd:NF033839 372 PKPE------VKPQPETPKPEVKPQPEKPKPEVKP------------------QPEKPKPEVKPQPEKPKPEVKPQPEKP 427
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 564376561 653 KYKATPSPKIPQTKPAPrQTTSPPPKLKPphsrRPAKEQVPKGSLHTTSKPKMPPSPE 710
Cdd:NF033839 428 KPEVKPQPEKPKPEVKP-QPEKPKPEVKP----QPETPKPEVKPQPEKPKPEVKPQPE 480
|
|
| FN3 |
COG3401 |
Fibronectin type 3 domain [General function prediction only]; |
860-1114 |
4.51e-05 |
|
Fibronectin type 3 domain [General function prediction only];
Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 47.69 E-value: 4.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 860 PSSTGRNTSVDSHATRKPGLIPGTRHRHTSPRPVPPQRKPLPPNNVTGKPGSAGIISSSRATSPPLKATLKPTGTATERP 939
Cdd:COG3401 73 AGTTSGVAAVAVAAAPPTATGLTTLTGSGSVGGATNTGLTSSDEVPSPAVGTATTATAVAGGAATAGTYALGAGLYGVDG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 940 GAEKKQPTAPASEEEFGNTTDFSSSPTKETDPLGKPRFIGPHVRYIPKPDN----KPCSITDSVRRFPTEEATEGNATSP 1015
Cdd:COG3401 153 ANASGTTASSVAGAGVVVSPDTSATAAVATTSLTVTSTTLVDGGGDIEPGTtyyyRVAATDTGGESAPSNEVSVTTPTTP 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 1016 PqNPPTNLTVVTVEgcPSFVILDWEKPLNDTVTEYEvISRENGSfSGKNKSIQITNQTFSTVENLKPDTSYEFQVKPKNP 1095
Cdd:COG3401 233 P-SAPTGLTATADT--PGSVTLSWDPVTESDATGYR-VYRSNSG-DGPFTKVATVTTTSYTDTGLTNGTTYYYRVTAVDA 307
|
250 260
....*....|....*....|
gi 564376561 1096 LG-EGPASNTVAFSTESADP 1114
Cdd:COG3401 308 AGnESAPSNVVSVTTDLTPP 327
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
462-684 |
6.22e-05 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 47.07 E-value: 6.22e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 462 PKTSRTAEQPRATLAPSEASFDPrtvEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPpRVKPAPE-PETRPSAQSTKA 540
Cdd:NF033839 308 KEVKPEPETPKPEVKPQLEKPKP---EVKPQPEKPKPEVKPQLETPKPEVKPQPEKPKP-EVKPQPEkPKPEVKPQPETP 383
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 541 PPHKTKKPGRRRPKTTRSPEVPKSKPALEPATVPPEILVPTIVPKPPQRPKatrrPEAPQIQPAHEPVTFGSEAPALAIV 620
Cdd:NF033839 384 KPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQ----PEKPKPEVKPQPEKPKPEVKPQPET 459
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 564376561 621 TTTDIAPVISRTKASV--TTLAPKSSRPRTRQRPKYKATPSPKIPQTKPAPRQTTSPPPKLKPPHS 684
Cdd:NF033839 460 PKPEVKPQPEKPKPEVkpQPEKPKPDNSKPQADDKKPSTPNNLSKDKQPSNQASTNEKATNKPKKS 525
|
|
| fn3 |
pfam00041 |
Fibronectin type III domain; |
116-195 |
7.00e-05 |
|
Fibronectin type III domain;
Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 42.79 E-value: 7.00e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 116 KPLQLVVGTLTPSSVFLSWgflinphhdwTLPSHCSSD-RFYTIRYREKDKEKKWIFQLCPATET--IVENLKPNTVYEF 192
Cdd:pfam00041 2 APSNLTVTDVTSTSLTVSW----------TPPPDGNGPiTGYEVEYRPKNSGEPWNEITVPGTTTsvTLTGLKPGTEYEV 71
|
...
gi 564376561 193 GVK 195
Cdd:pfam00041 72 RVQ 74
|
|
| FN3 |
COG3401 |
Fibronectin type 3 domain [General function prediction only]; |
1003-1157 |
9.40e-05 |
|
Fibronectin type 3 domain [General function prediction only];
Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 46.53 E-value: 9.40e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 1003 PTEEATEGNATSPPQnPPTNLTVVTVEgcPSFVILDWEKPLNDTVTEYEV--ISRENGSFSGKNKSIqitNQTFSTVENL 1080
Cdd:COG3401 314 PSNVVSVTTDLTPPA-APSGLTATAVG--SSSITLSWTASSDADVTGYNVyrSTSGGGTYTKIAETV---TTTSYTDTGL 387
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 564376561 1081 KPDTSYEFQVKPKNPLG-EGPASNTVAFSTESADPRVSEPISAGRDAIWTERPFNSDSYSECKGKQYVKRTWYKKFVG 1157
Cdd:COG3401 388 TPGTTYYYKVTAVDAAGnESAPSEEVSATTASAASGESLTASVDAVPLTDVAGATAAASAASNPGVSAAVLADGGDTG 465
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
116-195 |
4.96e-04 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 40.56 E-value: 4.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 116 KPLQLVVGTLTPSSVFLSWgfliNPHHDWTLPSHcssdrFYTIRYREKDKE--KKWIFQLCPATETIVENLKPNTVYEFG 193
Cdd:cd00063 3 PPTNLRVTDVTSTSVTLSW----TPPEDDGGPIT-----GYVVEYREKGSGdwKEVEVTPGSETSYTLTGLKPGTEYEFR 73
|
..
gi 564376561 194 VK 195
Cdd:cd00063 74 VR 75
|
|
| FN3 |
smart00060 |
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
117-195 |
1.12e-03 |
|
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 39.13 E-value: 1.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 117 PLQLVVGTLTPSSVFLSWgflinphhdwtLPSHCSSDRFYTIRYREKDKEKKWIFQLCPA----TETIVENLKPNTVYEF 192
Cdd:smart00060 4 PSNLRVTDVTSTSVTLSW-----------EPPPDDGITGYIVGYRVEYREEGSEWKEVNVtpssTSYTLTGLKPGTEYEF 72
|
...
gi 564376561 193 GVK 195
Cdd:smart00060 73 RVR 75
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
506-659 |
4.02e-03 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 40.91 E-value: 4.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 506 TSIPSTPKRQSTPKPPRVKPAPEPETRPSAQSTKAPPHKTKKP--GRRRPKTTRSPEVPKSKPALEPATVPPEilvptiV 583
Cdd:NF040712 200 ATVPRLAREPADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLasARRRRAGVEQPEDEPVGPGAAPAAEPDE------A 273
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 564376561 584 PKPPQRPKATRRPEAPQIQPAHEPVTFGSEAPALAIVTTTDiapvisrtkasvtTLAPKSSRPRTRQRPKyKATPS 659
Cdd:NF040712 274 TRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPA-------------RPEPPPAPKPKRRRRR-ASVPS 335
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
467-612 |
6.65e-03 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 40.14 E-value: 6.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 467 TAEQPRATLAP----SEASFDPRTVEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETR-----PSAQS 537
Cdd:NF040712 191 DFGRPLRPLATvprlAREPADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVgpgaaPAAEP 270
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 564376561 538 TKAPPHKTKKPGRRRPKTTRSPEVPKSKPALEPATVPPEILVPTIVPKPPQRPKATRRPEAPqiQPAHEPVTFGS 612
Cdd:NF040712 271 DEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKPKRRRRRAS--VPSWDDVLLGV 343
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
328-769 |
1.89e-15 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 82.29 E-value: 1.89e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 328 PVTVTPETVSRSTKPTLASALDTAETALVLSEKTPETAQSVLIPESELLLSSLAPKGSPEfpeaktafPSEKPGGSLASS 407
Cdd:PHA03247 2575 PRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPA--------ANEPDPHPPPTV 2646
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 408 EEPWVVPGAktSEDSRVVQPRTATYDVVSSSATSD---------ETEVEPHTATSDPILDSVPPKTSRTAEQPRATLAPS 478
Cdd:PHA03247 2647 PPPERPRDD--PAPGRVSRPRRARRLGRAAQASSPpqrprrraaRPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPG 2724
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 479 EASFDPRTVEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQSTKAPPHKTKkpgrrrPKTTRS 558
Cdd:PHA03247 2725 PAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLS------ESRESL 2798
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 559 PEVPKSKPALEPATVPPEILVPTIVPKPPQRPKATRRPEAPQIQPAHEPVTF---GSEAPAlaivtttdiAPVISRTKAS 635
Cdd:PHA03247 2799 PSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLplgGSVAPG---------GDVRRRPPSR 2869
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 636 VTTLAP-KSSRPRTRQRPKYKATPSPKiPQTKPAPRQTTSPPPKLkPPHSRRPAKEQVPKGSLHTTSKPKMPPSPEVVDI 714
Cdd:PHA03247 2870 SPAAKPaAPARPPVRRLARPAVSRSTE-SFALPPDQPERPPQPQA-PPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTT 2947
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 564376561 715 TSVPKDEQLSHKPDPEVSQSETVLPPVTFRVEPPkttivPLETRDIPLIPVISPR 769
Cdd:PHA03247 2948 DPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQ-----PAPSREAPASSTPPLT 2997
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
455-841 |
1.67e-13 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 75.50 E-value: 1.67e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 455 PILDSVPPKTSRTAEQPRATLAPSEASFDPRTVEIFTSPEV-----RPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEp 529
Cdd:PTZ00449 514 PEASGLPPKAPGDKEGEEGEHEDSKESDEPKEGGKPGETKEgevgkKPGPAKEHKPSKIPTLSKKPEFPKDPKHPKDPE- 592
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 530 etrpSAQSTKAPPHKTKKPGRRRPKTTRSPEVPKSKPALEPATVPPEilvptivPKPPQRPKATRRPEAPQI-----QPA 604
Cdd:PTZ00449 593 ----EPKKPKRPRSAQRPTRPKSPKLPELLDIPKSPKRPESPKSPKR-------PPPPQRPSSPERPEGPKIikspkPPK 661
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 605 HEPVTFGseaPALAIVTTTDIAPVISRTKASVTTLAPKSS-----RPRTRQRPKYKATPSPKIPQTKPAPRQTTSPPPKL 679
Cdd:PTZ00449 662 SPKPPFD---PKFKEKFYDDYLDAAAKSKETKTTVVLDESfesilKETLPETPGTPFTTPRPLPPKLPRDEEFPFEPIGD 738
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 680 KPPHSRRPAKEQVPKGSLHTTSK--PKMPPSPEVV-------DITSVPKD-EQLSHKPDPEVSQSET------VLPPVTF 743
Cdd:PTZ00449 739 PDAEQPDDIEFFTPPEEERTFFHetPADTPLPDILaeefkeeDIHAETGEpDEAMKRPDSPSEHEDKppgdhpSLPKKRH 818
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 744 RVEPPKTTIVPLET------RDIPLIPVISPRPSEEELQTTMEQTDQSTQELFTTKIPRTTELA--KTTQAPHRLHTTPV 815
Cdd:PTZ00449 819 RLDGLALSTTDLESdagriaKDASGKIVKLKRSKSFDDLTTVEEAEEMGAEARKIVVDDDGTEAddEDTHPPEEKHKSEV 898
|
410 420
....*....|....*....|....*.
gi 564376561 816 RPRIPERPHGRPALNKTTTRPDRTKS 841
Cdd:PTZ00449 899 RRRRPPKKPSKPKKPSKPKKPKKPDS 924
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
509-980 |
5.99e-13 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 74.20 E-value: 5.99e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 509 PSTPKRQSTPKPPRVKPAPEPETRPSAQSTKAPPHKTKKPGRrrPKTTRSPEVPKSKPALEPATVPPEILVPTIVPKPPQ 588
Cdd:PHA03247 2553 PPLPPAAPPAAPDRSVPPPRPAPRPSEPAVTSRARRPDAPPQ--SARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPS 2630
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 589 R-----------PKATRRPEAPQIQPAHEPVTFGSEAPALAIVTTTDIAPVISRTKA------SVTTLA---PKSSRPRT 648
Cdd:PHA03247 2631 PspaanepdphpPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAarptvgSLTSLAdppPPPPTPEP 2710
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 649 RQRPKYKATPSPKIPQ----------------------------TKPAPRQTTSPPPKLKPPHSRR---PAKEQVPKGSL 697
Cdd:PHA03247 2711 APHALVSATPLPPGPAaarqaspalpaapappavpagpatpggpARPARPPTTAGPPAPAPPAAPAagpPRRLTRPAVAS 2790
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 698 HTTSKPKMP----PSPEVVDITSVPKDEQLSHKPDPEVSQSETVLPPVTFRVEPPKTTIVPLETRDIPLIPVISPRPSEE 773
Cdd:PHA03247 2791 LSESRESLPspwdPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRS 2870
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 774 ELQTTMEQTDQSTQELFTTKIPRTTE---LAKTTQAPHRLHTTPVRPRIPERPHGRPALNKTTTRPDRTKSRgmshkngV 850
Cdd:PHA03247 2871 PAAKPAAPARPPVRRLARPAVSRSTEsfaLPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPP-------L 2943
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 851 GPGTKQTPKPSSTGRNTSVDSHATrKPGLIPGTRHRHTSPRP-VPPQRKPLPPNNVTGKPGSAGIISS----SRATSPP- 924
Cdd:PHA03247 2944 APTTDPAGAGEPSGAVPQPWLGAL-VPGRVAVPRFRVPQPAPsREAPASSTPPLTGHSLSRVSSWASSlalhEETDPPPv 3022
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*..
gi 564376561 925 -LKATLKPTGTATerpgaEKKQPTAPASEEEFGNTTDFSSSPTKETDPLGKPRFIGP 980
Cdd:PHA03247 3023 sLKQTLWPPDDTE-----DSDADSLFDSDSERSDLEALDPLPPEPHDPFAHEPDPAT 3074
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
548-998 |
2.36e-11 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 68.81 E-value: 2.36e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 548 PGRRRPKTTRSPEV------PKSKPALEPATVP-PEILVPTIVPK-----------------------------PPQRPK 591
Cdd:PHA03247 2478 PVYRRPAEARFPFAagaapdPGGGGPPDPDAPPaPSRLAPAILPDepvgepvhprmltwirgleelasddagdpPPPLPP 2557
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 592 ATRRPEAPQIQPAHEPVTFGSEaPALaivtttdiapvisRTKASVTTLAPKSSRPRTrqrPKYKATPSPKIPQTKPAPRQ 671
Cdd:PHA03247 2558 AAPPAAPDRSVPPPRPAPRPSE-PAV-------------TSRARRPDAPPQSARPRA---PVDDRGDPRGPAPPSPLPPD 2620
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 672 TTSPPPklkPPHSRRPAKEQVPKGslhttsKPKMPPSPEVVDITSVPKDEQLSHKPDPEVSQSETVLPPVTFRVEPPKTT 751
Cdd:PHA03247 2621 THAPDP---PPPSPSPAANEPDPH------PPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPT 2691
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 752 IVPLETRDIPLIPVISPRP------SEEELQTTMEQTDQSTQELFTTKIPRTTELAKTTQAPHRLHTTPVRPRIPER--- 822
Cdd:PHA03247 2692 VGSLTSLADPPPPPPTPEPaphalvSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPApap 2771
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 823 PHGRPALNKTTTRPDRTKSRGMSHKNGVGPGTKQTPKPSSTGRNTSVDSHATRKPGLIPGtrhrhTSPRPVPPQRKPLPP 902
Cdd:PHA03247 2772 PAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPP-----TSAQPTAPPPPPGPP 2846
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 903 NNVTGKPGSAGIISSSRATSPPLKATLKPTgTATERPGAEKKQPTAPASEEEFGNTTDF--------SSSPTKETDPLGK 974
Cdd:PHA03247 2847 PPSLPLGGSVAPGGDVRRRPPSRSPAAKPA-APARPPVRRLARPAVSRSTESFALPPDQperppqpqAPPPPQPQPQPPP 2925
|
490 500
....*....|....*....|....
gi 564376561 975 PRFIGPHVRYIPKPDNKPCSITDS 998
Cdd:PHA03247 2926 PPQPQPPPPPPPRPQPPLAPTTDP 2949
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
562-770 |
6.34e-11 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 66.82 E-value: 6.34e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 562 PKSKPALEPATVPPEILVPTIVPKPPQRPKATRRPEAPQIQPAHEPVTFGSEA-PALAIVTTTDIAPVISRTKASVTTLA 640
Cdd:PRK12323 374 PATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRsPAPEALAAARQASARGPGGAPAPAPA 453
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 641 PKSSrPRTRQRPkykATPSPKipqtkPAPRQTTSPPPKLKPPHSRRPAKEQVPKGSlhttSKPKMPPSPEVVDITSVPKD 720
Cdd:PRK12323 454 PAAA-PAAAARP---AAAGPR-----PVAAAAAAAPARAAPAAAPAPADDDPPPWE----ELPPEFASPAPAQPDAAPAG 520
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 564376561 721 EQLSHKPDPEVSQsetvlPPVTFRVEPPKTTIVPLETRDIPLIPVISPRP 770
Cdd:PRK12323 521 WVAESIPDPATAD-----PDDAFETLAPAPAAAPAPRAAAATEPVVAPRP 565
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1018-1109 |
9.44e-11 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 59.43 E-value: 9.44e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 1018 NPPTNLTVVTVEgcPSFVILDWEKPLNDT--VTEYEVISRENGSFSGKNKSIQITNQTFSTVENLKPDTSYEFQVKPKNP 1095
Cdd:cd00063 2 SPPTNLRVTDVT--STSVTLSWTPPEDDGgpITGYVVEYREKGSGDWKEVEVTPGSETSYTLTGLKPGTEYEFRVRAVNG 79
|
90
....*....|....
gi 564376561 1096 LGEGPASNTVAFST 1109
Cdd:cd00063 80 GGESPPSESVTVTT 93
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
413-668 |
8.65e-09 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 60.10 E-value: 8.65e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 413 VPGAKTSEDsrVVQPRTATYDVVSSSATSDETEVEPHTATSDPILDSVPPKTSRTAEQPRATLAPSEASFDPRTVEIFTS 492
Cdd:PRK10263 363 VPGPQTGEP--VIAPAPEGYPQQSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYAPAPEQ 440
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 493 PEVRPTTAAPQQTTSIPSTPKRQstPKPPRVKPAPEPETRPSAQSTKAPPHKTKKPGRRRPKTTRSP-----EV------ 561
Cdd:PRK10263 441 PVAGNAWQAEEQQSTFAPQSTYQ--TEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPVVEETKPARPPlyyfeEVeekrar 518
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 562 ----------PKSKPALEPATVPPEILVPTIVPKPPQRPKATRRPEAPQIQPA--HEPVTFGSEAPALAIVTTTDIAPvi 629
Cdd:PRK10263 519 ereqlaawyqPIPEPVKEPEPIKSSLKAPSVAAVPPVEAAAAVSPLASGVKKAtlATGAAATVAAPVFSLANSGGPRP-- 596
|
250 260 270
....*....|....*....|....*....|....*....
gi 564376561 630 sRTKASVTTLAPKSSRPRTRQRpKYKATPSPKIPQTKPA 668
Cdd:PRK10263 597 -QVKEGIGPQLPRPKRIRVPTR-RELASYGIKLPSQRAA 633
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
309-575 |
8.66e-09 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 60.34 E-value: 8.66e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 309 TLALPAESKTPEVEKVAGQPVTVTPetvSRSTKPTLASALDTAETALvlSEKTPETAQSVLIPESELLLSSLAPKGSPEF 388
Cdd:PHA03247 2756 RPARPPTTAGPPAPAPPAAPAAGPP---RRLTRPAVASLSESRESLP--SPWDPADPPAAVLAPAAALPPAASPAGPLPP 2830
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 389 PEAKTAFPSEKPGGSLASSEEP--WVVPGAKtsedsrvvqprtatydvVSSSATSDETEVEPHTATSDPILDSVPPKTSR 466
Cdd:PHA03247 2831 PTSAQPTAPPPPPGPPPPSLPLggSVAPGGD-----------------VRRRPPSRSPAAKPAAPARPPVRRLARPAVSR 2893
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 467 TAE---QPRATLAPseasfdPRTVEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAqstKAPPH 543
Cdd:PHA03247 2894 STEsfaLPPDQPER------PPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAV---PQPWL 2964
|
250 260 270
....*....|....*....|....*....|..
gi 564376561 544 KTKKPGRRRPKTTRSPEVPKSKPALEPATVPP 575
Cdd:PHA03247 2965 GALVPGRVAVPRFRVPQPAPSREAPASSTPPL 2996
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
447-709 |
1.58e-08 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 59.09 E-value: 1.58e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 447 EPHTATSDPILDSVPPKTSRTAEQPRATLAPSEASFDprtveiftSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPA 526
Cdd:PRK07003 359 EPAVTGGGAPGGGVPARVAGAVPAPGARAAAAVGASA--------VPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAP 430
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 527 PEPETRPSAQSTKAPPHKTKKPGrrrpkttrSPEVPKSKPALEPATVPPEILVPTIVPKPPQRPKATRRPEAPQIQPAHE 606
Cdd:PRK07003 431 APPATADRGDDAADGDAPVPAKA--------NARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAA 502
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 607 PVTFGSEAPALAIVTTTDIAPVISRTKASVTTLAPKSSRPRTRQ----------RPKYKATPSPKIPQTKPAPRQTTSPP 676
Cdd:PRK07003 503 TPAAVPDARAPAAASREDAPAAAAPPAPEARPPTPAAAAPAARAggaaaaldvlRNAGMRVSSDRGARAAAAAKPAAAPA 582
|
250 260 270
....*....|....*....|....*....|...
gi 564376561 677 PKLKPPHSRRPAKEQVPKGSLHTTSKPKMPPSP 709
Cdd:PRK07003 583 AAPKPAAPRVAVQVPTPRARAATGDAPPNGAAR 615
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
504-912 |
1.88e-08 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 59.01 E-value: 1.88e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 504 QTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQSTKAPPHKTKKPGRRRPKTTRSPEVPKSkpalepaTVPPEILVPTIV 583
Cdd:pfam03154 163 QQQILQTQPPVLQAQSGAASPPSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNQTQS-------TAAPHTLIQQTP 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 584 PKPPQRPKATRRPEAPQIQPAHEPVTFGSEAPALAIVTTTDIAPVISRTKAS-VTTLAPKSSRPRTRQRPKYKATPSPKI 662
Cdd:pfam03154 236 TLHPQRLPSPHPPLQPMTQPPPPSQVSPQPLPQPSLHGQMPPMPHSLQTGPShMQHPVPPQPFPLTPQSSQSQVPPGPSP 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 663 PQTKPAPRQTTSPPPKLKPPHSRRPAKEQVPKGSLhTTSKPKMPPSPEVVDITSVPKDEQLSHKPDPEVSQSETVLPPvt 742
Cdd:pfam03154 316 AAPGQSQQRIHTPPSQSQLQSQQPPREQPLPPAPL-SMPHIKPPPTTPIPQLPNPQSHKHPPHLSGPSPFQMNSNLPP-- 392
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 743 frvEPPKTTIVPLETRDIPLI--PVISPRPSEEELQTTMEQTDQSTQelfTTKIPRTTELAKTTQAPHRLHTTPVRPRIP 820
Cdd:pfam03154 393 ---PPALKPLSSLSTHHPPSAhpPPLQLMPQSQQLPPPPAQPPVLTQ---SQSLPPPAASHPPTSGLHQVPSQSPFPQHP 466
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 821 ERPHGRPALNKTTTRPDRTKSrgmshkngVGPGTKQ-TPKPSSTGRNTSVDSHATRKPGLIPGTRHRHTS--PRPVPPQR 897
Cdd:pfam03154 467 FVPGGPPPITPPSGPPTSTSS--------AMPGIQPpSSASVSSSGPVPAAVSCPLPPVQIKEEALDEAEepESPPPPPR 538
|
410
....*....|....*
gi 564376561 898 KPLPPNNVTGKPGSA 912
Cdd:pfam03154 539 SPSPEPTVVNTPSHA 553
|
|
| FN3 |
smart00060 |
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1019-1099 |
3.78e-08 |
|
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 51.85 E-value: 3.78e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 1019 PPTNLTVVTVEgcPSFVILDWEKPLNDTVTEYEV-ISRENGSFSGKNKSIQITNQTFS-TVENLKPDTSYEFQVKPKNPL 1096
Cdd:smart00060 3 PPSNLRVTDVT--STSVTLSWEPPPDDGITGYIVgYRVEYREEGSEWKEVNVTPSSTSyTLTGLKPGTEYEFRVRAVNGA 80
|
...
gi 564376561 1097 GEG 1099
Cdd:smart00060 81 GEG 83
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
484-688 |
6.53e-08 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 57.19 E-value: 6.53e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 484 PRTVEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQS--TKAPPHKTKKPGRRRPKTTRSPEV 561
Cdd:PRK12323 374 PATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSpaPEALAAARQASARGPGGAPAPAPA 453
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 562 PKSKP--ALEPATVPPEILVPTIVPKPPQRPKATRRPEAPQIQPAHE--PVTFGSEAPAlaivtttDIAPvisrtkASVT 637
Cdd:PRK12323 454 PAAAPaaAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEelPPEFASPAPA-------QPDA------APAG 520
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 564376561 638 TLAPKSSRPRTRQRPKYKATPSPKiPQTKPAPRQTTSPPPKLKPphsRRPA 688
Cdd:PRK12323 521 WVAESIPDPATADPDDAFETLAPA-PAAAPAPRAAAATEPVVAP---RPPR 567
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
384-751 |
9.22e-08 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 56.62 E-value: 9.22e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 384 GSPEFPEAkTAFPSEKPGGSLASSEEPWVVPGAKTSEDSRvvQPRTATYDVVsssaTSDETEVEPHTATSDPILDSVP-- 461
Cdd:PTZ00449 509 EPPEGPEA-SGLPPKAPGDKEGEEGEHEDSKESDEPKEGG--KPGETKEGEV----GKKPGPAKEHKPSKIPTLSKKPef 581
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 462 ---PKTSRTAEQPRATLAPSEASfdprtveiftSPEVRPTTAAPQqTTSIPSTPKRQSTPKPPRVKPAPE-------PET 531
Cdd:PTZ00449 582 pkdPKHPKDPEEPKKPKRPRSAQ----------RPTRPKSPKLPE-LLDIPKSPKRPESPKSPKRPPPPQrpssperPEG 650
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 532 RPSAQSTKaPPHKTKKP----------------GRRRPKTTRSPEVPKSKPALEPATVPPEILVPTIVPK--PPQRPKA- 592
Cdd:PTZ00449 651 PKIIKSPK-PPKSPKPPfdpkfkekfyddyldaAAKSKETKTTVVLDESFESILKETLPETPGTPFTTPRplPPKLPRDe 729
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 593 ------TRRPEAPQIQPAH------EPVTFGSEAPALAIVTTTdIAPVISRTKASVTTLAPKSSRPRTRQRPKYKATPS- 659
Cdd:PTZ00449 730 efpfepIGDPDAEQPDDIEfftppeEERTFFHETPADTPLPDI-LAEEFKEEDIHAETGEPDEAMKRPDSPSEHEDKPPg 808
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 660 --PKIPQTK---PAPRQTT----SPPPKLKPPHSRRPAKEQVPKGSLHTTS---KPKMPP--SPEVVDITSVPKDEQLSH 725
Cdd:PTZ00449 809 dhPSLPKKRhrlDGLALSTtdleSDAGRIAKDASGKIVKLKRSKSFDDLTTveeAEEMGAeaRKIVVDDDGTEADDEDTH 888
|
410 420
....*....|....*....|....*.
gi 564376561 726 KPDPEVSQSETVLPPVTFRVEPPKTT 751
Cdd:PTZ00449 889 PPEEKHKSEVRRRRPPKKPSKPKKPS 914
|
|
| PRK14949 |
PRK14949 |
DNA polymerase III subunits gamma and tau; Provisional |
284-684 |
2.08e-07 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237863 [Multi-domain] Cd Length: 944 Bit Score: 55.50 E-value: 2.08e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 284 STVKLP---SSIMLEISDALKAQLAKNETLALPAESKTPEVEKVAGQPVTVTPETVSRS-TKPTLASALDTAETALVLSE 359
Cdd:PRK14949 372 AEISLPegqTPSALAAAVQAPHANEPQFVNAAPAEKKTALTEQTTAQQQVQAANAEAVAeADASAEPADTVEQALDDESE 451
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 360 ktPETAqsvLIPESELLLSSLAPKGSpEFPEAKTAFPSEKPGGSLASSEEPWVVP-GAKTSEDSRVVQPRTATyDVVSSS 438
Cdd:PRK14949 452 --LLAA---LNAEQAVILSQAQSQGF-EASSSLDADNSAVPEQIDSTAEQSVVNPsVTDTQVDDTSASNNSAA-DNTVDD 524
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 439 ATSDETEVEPHTATSDPILDSVPPKTSrtAEQPRATLAPSEASFDPRTVEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTP 518
Cdd:PRK14949 525 NYSAEDTLESNGLDEGDYAQDSAPLDA--YQDDYVAFSSESYNALSDDEQHSANVQSAQSAAEAQPSSQSLSPISAVTTA 602
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 519 KPPRV------------------------------KPAPE--PETRPSAQSTKAPPHKTKKPgrRRPKTTRSPEVPKSKP 566
Cdd:PRK14949 603 AASLAdddildavlaardsllsdldalspkegdgkKSSADrkPKTPPSRAPPASLSKPASSP--DASQTSASFDLDPDFE 680
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 567 ALEPATVPPEILVPTIVPKPPQRPKATRRP---EAPQIQPAHEPVTFGSEAPALAIVTTTDIAPvisrTKASVTTLAPKS 643
Cdd:PRK14949 681 LATHQSVPEAALASGSAPAPPPVPDPYDRPpweEAPEVASANDGPNNAAEGNLSESVEDASNSE----LQAVEQQATHQP 756
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 564376561 644 SRPRTRQRPKYKATPspkiPQTKPAPRQTTSPPPKLkPPHS 684
Cdd:PRK14949 757 QVQAEAQSPASTTAL----TQTSSEVQDTELNLVLL-SSGS 792
|
|
| fn3 |
pfam00041 |
Fibronectin type III domain; |
1019-1102 |
6.22e-07 |
|
Fibronectin type III domain;
Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 48.57 E-value: 6.22e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 1019 PPTNLTVVTVEgcPSFVILDWEKP--LNDTVTEYEVISRENGSFSGKNkSIQITNQTFS-TVENLKPDTSYEFQVKPKNP 1095
Cdd:pfam00041 2 APSNLTVTDVT--STSLTVSWTPPpdGNGPITGYEVEYRPKNSGEPWN-EITVPGTTTSvTLTGLKPGTEYEVRVQAVNG 78
|
....*..
gi 564376561 1096 LGEGPAS 1102
Cdd:pfam00041 79 GGEGPPS 85
|
|
| PHA03379 |
PHA03379 |
EBNA-3A; Provisional |
496-860 |
1.59e-06 |
|
EBNA-3A; Provisional
Pssm-ID: 223066 [Multi-domain] Cd Length: 935 Bit Score: 52.75 E-value: 1.59e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 496 RPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQSTKAPPHKTKK----PGRRRPKT--------TRSPEVPK 563
Cdd:PHA03379 410 EPTYGTPRPPVEKPRPEVPQSLETATSHGSAQVPEPPPVHDLEPGPLHDQHSmapcPVAQLPPGplqdlepgDQLPGVVQ 489
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 564 S-KPALEPATVPPEILVPTIVPKPPQRPKATRRPEAPQIQPAhEPVTfgseAPALAIVTTTDIAPvisrTKASVTTLAPK 642
Cdd:PHA03379 490 DgRPACAPVPAPAGPIVRPWEASLSQVPGVAFAPVMPQPMPV-EPVP----VPTVALERPVCPAP----PLIAMQGPGET 560
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 643 SSRPRTRQRpkYKATPSPKIPQTKPAPRQTTSPPPKLKPPHSRRPAKEQVpkgslhttskpkMPPspevvDITSVPKDEQ 722
Cdd:PHA03379 561 SGIVRVRER--WRPAPWTPNPPRSPSQMSVRDRLARLRAEAQPYQASVEV------------QPP-----QLTQVSPQQP 621
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 723 LSHKPDPEVSQ-SETVLPPVTFRVEPPKTTIVPLETRDIPLIPVISPRPSEEELQTTMEQTDQ--STQELFtTKIPRTTE 799
Cdd:PHA03379 622 MEYPLEPEQQMfPGSPFSQVADVMRAGGVPAMQPQYFDLPLQQPISQGAPLAPLRASMGPVPPvpATQPQY-FDIPLTEP 700
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 800 LAKTTQAPHRLHTTPVR-PRIPERPHGRPALNKTTTRP--------DRTKSRGMSHKNGVGPGTKQTPKP 860
Cdd:PHA03379 701 INQGASAAHFLPQQPMEgPLVPERWMFQGATLSQSVRPgvaqsqyfDLPLTQPINHGAPAAHFLHQPPME 770
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
454-701 |
1.76e-06 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 52.78 E-value: 1.76e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 454 DPILD--SVPPKTSRTAEQPRAT---LAPSEASFDPRTVEIFTSPEVRPTTAapQQTTSIPSTPKRQSTPKPPRVKPAP- 527
Cdd:PRK10263 308 DPLLNgaPITEPVAVAAAATTATqswAAPVEPVTQTPPVASVDVPPAQPTVA--WQPVPGPQTGEPVIAPAPEGYPQQSq 385
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 528 ---------EPETRPsAQSTKAPPHKTKKPGRRRPKTTRSPEVPKSKPALEPATVPPEILVPTIV--PKPPQRPKATRRP 596
Cdd:PRK10263 386 yaqpavqynEPLQQP-VQPQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAeeQQSTFAPQSTYQT 464
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 597 EAPQIQPAHEPVTFgSEAPALAIVTTTDIAPVISRTKASVTTL------APKSSRPRTRQRPKYKATPSP---KIPQTKP 667
Cdd:PRK10263 465 EQTYQQPAAQEPLY-QQPQPVEQQPVVEPEPVVEETKPARPPLyyfeevEEKRAREREQLAAWYQPIPEPvkePEPIKSS 543
|
250 260 270
....*....|....*....|....*....|....
gi 564376561 668 APRQTTSPPPKLKPPHSRRPAKEQVPKGSLHTTS 701
Cdd:PRK10263 544 LKAPSVAAVPPVEAAAAVSPLASGVKKATLATGA 577
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
448-648 |
3.13e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 51.42 E-value: 3.13e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 448 PHTATSDPILDSVPPKTSRTAEQPRATLAPSEASFDPRTVEIFTSPEVRPTTAAPQ----QTTSIPSTPKRQSTPKP-PR 522
Cdd:PRK12323 374 PATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPApealAAARQASARGPGGAPAPaPA 453
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 523 VKPAPEPETRPSAQSTKAPPHKTKKPGRRRPKTTRSPEVPKSKPALE--PATVPPEILVPTIVPKPPQRPKATRRPEAPQ 600
Cdd:PRK12323 454 PAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEelPPEFASPAPAQPDAAPAGWVAESIPDPATAD 533
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 564376561 601 IQPAHEPVTfgsEAPALAIVTTTDIAPvisrtKASVTTLAPKSSRPRT 648
Cdd:PRK12323 534 PDDAFETLA---PAPAAAPAPRAAAAT-----EPVVAPRPPRASASGL 573
|
|
| PHA03377 |
PHA03377 |
EBNA-3C; Provisional |
519-902 |
3.13e-06 |
|
EBNA-3C; Provisional
Pssm-ID: 177614 [Multi-domain] Cd Length: 1000 Bit Score: 51.59 E-value: 3.13e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 519 KPPRVKPAPEPETRPSAQSTKAPPHKTKKPGR-----RRPKTTRSPEVPKSKPALEPATVPPeilvpTIVPKPPQRPKAT 593
Cdd:PHA03377 414 RKPRTLPWPTPKTHPVKRTLVKTSGRSDEAEQaqstpERPGPSDQPSVPVEPAHLTPVEHTT-----VILHQPPQSPPTV 488
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 594 rrpeapQIQPAHEPVTFGSEApalAIVTTTDIAPVISRTKASVTTLAPKSSRPRTRQRPKYKATPSPKIPQTKPAPRQTT 673
Cdd:PHA03377 489 ------AIKPAPPPSRRRRGA---CVVYDDDIIEVIDVETTEEEESVTQPAKPHRKVQDGFQRSGRRQKRATPPKVSPSD 559
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 674 SPPPKLKPPHSRRPAKEQVPKGSLHTTSKPKMPPSpevvditSVPKDEQLSHKPDPEVSQSETVLPPVTFRVEPPktTIV 753
Cdd:PHA03377 560 RGPPKASPPVMAPPSTGPRVMATPSTGPRDMAPPS-------TGPRQQAKCKDGPPASGPHEKQPPSSAPRDMAP--SVV 630
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 754 PLETRDIPLIPVISPRPSEEELQTTMEQTDQSTQELFTTKIPRTTElakTTQAPHRLHTTPVRPRIPErphGRPALNKTT 833
Cdd:PHA03377 631 RMFLRERLLEQSTGPKPKSFWEMRAGRDGSGIQQEPSSRRQPATQS---TPPRPSWLPSVFVLPSVDA---GRAQPSEES 704
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 564376561 834 TRPDRTKSRGMSHKNGVGPGTKQTPkpsstgrnTSVDSHATRKP-----GLIPGTRHRHTSPRPVPPQRKPLPP 902
Cdd:PHA03377 705 HLSSMSPTQPISHEEQPRYEDPDDP--------LDLSLHPDQAPppshqAPYSGHEEPQAQQAPYPGYWEPRPP 770
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
667-970 |
3.31e-06 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 51.61 E-value: 3.31e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 667 PAPRQTTSPPPKlKPPHSRRPAKEQVPKGSLHTTSKPKMPPSPevvditsvpKDEQLSHKPDPEVSQSETVLPPVTFRVE 746
Cdd:PTZ00449 511 PEGPEASGLPPK-APGDKEGEEGEHEDSKESDEPKEGGKPGET---------KEGEVGKKPGPAKEHKPSKIPTLSKKPE 580
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 747 PPKTTIVPLETRdiplipviSPRPSEEELQTTMEQTDQSTQELFTTKIPRTTELAKTTQAPHRlHTTPVRPRIPERPHGr 826
Cdd:PTZ00449 581 FPKDPKHPKDPE--------EPKKPKRPRSAQRPTRPKSPKLPELLDIPKSPKRPESPKSPKR-PPPPQRPSSPERPEG- 650
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 827 PALNKTTTRPDRTKS------RGMSHKNGVGPGTKQTPKPSSTGRNTSVDSHATRKPGLIPGTRHrhTSPRPVPPQRKPL 900
Cdd:PTZ00449 651 PKIIKSPKPPKSPKPpfdpkfKEKFYDDYLDAAAKSKETKTTVVLDESFESILKETLPETPGTPF--TTPRPLPPKLPRD 728
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 564376561 901 P--PNNVTGKPGSAGIISSSRATSPPLKAT-LKPTGTATERPGA---EKKQPTAPASEEEFGNTTDFSSSPTKETD 970
Cdd:PTZ00449 729 EefPFEPIGDPDAEQPDDIEFFTPPEEERTfFHETPADTPLPDIlaeEFKEEDIHAETGEPDEAMKRPDSPSEHED 804
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
396-731 |
5.55e-06 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 50.84 E-value: 5.55e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 396 PSEKPGGSLASSEEP-------WVVPGAKTSEDSRVVQPRTATYDVVSSSATSDETEVEPHTAT-SDPILDSVPPKTSRT 467
Cdd:PHA03378 602 PSQTPEPPTTQSHIPetsaprqWPMPLRPIPMRPLRMQPITFNVLVFPTPHQPPQVEITPYKPTwTQIGHIPYQPSPTGA 681
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 468 AEQPRATLAPSEASFDPRTveiftspevrPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQSTKAPPHKTKK 547
Cdd:PHA03378 682 NTMLPIQWAPGTMQPPPRA----------PTPMRPPAAPPGRAQRPAAATGRARPPAAAPGRARPPAAAPGRARPPAAAP 751
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 548 PGRRRPKTTRSPEVPKSKPALEPATVPPeilvPTIVPKPPQRPKATRRP-EAPQIQPA----HEPVTFGSEAPALAIVTT 622
Cdd:PHA03378 752 GRARPPAAAPGRARPPAAAPGAPTPQPP----PQAPPAPQQRPRGAPTPqPPPQAGPTsmqlMPRAAPGQQGPTKQILRQ 827
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 623 TDIAPV-----ISRTKASVTTLAPKSSRPRTRQRPKYKATPSPKI--PQTKPA--PRQTTSPPPKLKPPHSRRPAKEQVP 693
Cdd:PHA03378 828 LLTGGVkrgrpSLKKPAALERQAAAGPTPSPGSGTSDKIVQAPVFypPVLQPIqvMRQLGSVRAAAASTVTQAPTEYTGE 907
|
330 340 350
....*....|....*....|....*....|....*....
gi 564376561 694 KGSLHTTSKPKMPPSPEV-VDITSVPKDEQLSHKPDPEV 731
Cdd:PHA03378 908 RRGVGPMHPTDIPPSKRAkTDAYVESQPPHGGQSHSFSV 946
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
462-599 |
8.38e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 50.10 E-value: 8.38e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 462 PKTSRTAEQPR--ATLAPSEAsfdprtveifTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQSTK 539
Cdd:PRK14951 366 PAAAAEAAAPAekKTPARPEA----------AAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPA 435
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 540 APPHKTKKPGRRRPKttrSPEVPKSKPALEPATVPPEILVPTIVPKPPQRPKATRRPEAP 599
Cdd:PRK14951 436 AAPAAAPAAVALAPA---PPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
389-604 |
1.12e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 49.85 E-value: 1.12e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 389 PEAKTAFPSEKPGGSLASSEEPW-VVPGAKTSEDSRVVQPRTATYDVVSSSATSDETEVEPHTATSDPILDSVPPKTSRT 467
Cdd:PRK07003 391 VGASAVPAVTAVTGAAGAALAPKaAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARASADSRCDERDAQP 470
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 468 AEQPRATLAP-SEASFDPRTVEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRvkpAPEPETRPSAQSTKAPPHKT- 545
Cdd:PRK07003 471 PADSGSASAPaSDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPAAAA---PPAPEARPPTPAAAAPAARAg 547
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 564376561 546 ---------KKPGRR----RPKTTRSPEVPKSKPALEPATVPPEILVPTIVPKPPQR-PKATRRPEAPQIQPA 604
Cdd:PRK07003 548 gaaaaldvlRNAGMRvssdRGARAAAAAKPAAAPAAAPKPAAPRVAVQVPTPRARAAtGDAPPNGAARAEQAA 620
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
493-710 |
1.39e-05 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 49.38 E-value: 1.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 493 PEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQSTKAPPHKTKKPGRRRPKTTRSPEVPKSKPALEPAT 572
Cdd:NF033839 292 PSAPKPGMQPSPQPEKKEVKPEPETPKPEVKPQLEKPKPEVKPQPEKPKPEVKPQLETPKPEVKPQPEKPKPEVKPQPEK 371
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 573 VPPEilvptiVPKPPQRPKATRRPEAPQIQPAHEPvtfgseapalaivtttdiAPVISRTKASVTTLAPKSSRPRTRQRP 652
Cdd:NF033839 372 PKPE------VKPQPETPKPEVKPQPEKPKPEVKP------------------QPEKPKPEVKPQPEKPKPEVKPQPEKP 427
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 564376561 653 KYKATPSPKIPQTKPAPrQTTSPPPKLKPphsrRPAKEQVPKGSLHTTSKPKMPPSPE 710
Cdd:NF033839 428 KPEVKPQPEKPKPEVKP-QPEKPKPEVKP----QPETPKPEVKPQPEKPKPEVKPQPE 480
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
500-693 |
1.72e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 49.10 E-value: 1.72e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 500 AAPQQTTSIPSTPKRQSTPKPPRVKPAP--EPETRPSAQSTKAPPHKTKKPGRRRPKTTRSPEVPKSKPALEPATVPPEI 577
Cdd:PRK12323 372 AGPATAAAAPVAQPAPAAAAPAAAAPAPaaPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPA 451
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 578 LVPTIVPKPPQRPKATrrpeAPQIQPAHEPVTFGSEAPALAIVTTTDIAPVISRTKASVTTLAPKSSRPRTRQRPKYKAT 657
Cdd:PRK12323 452 PAPAAAPAAAARPAAA----GPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIP 527
|
170 180 190
....*....|....*....|....*....|....*.
gi 564376561 658 PSPKIPQTKPAPRQTTSPPPKLKPPHSRRPAKEQVP 693
Cdd:PRK12323 528 DPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAP 563
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
438-858 |
2.22e-05 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 49.01 E-value: 2.22e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 438 SATSDETEVEPHT------ATSDPILDSVPPKTSRTAEQPR--ATLAPSEASFDPRTVEIFTSPEVRPTTAAPQQTTSIP 509
Cdd:PHA03307 25 PATPGDAADDLLSgsqgqlVSDSAELAAVTVVAGAAACDRFepPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREG 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 510 STPKRQSTPKPPRVKPAPEPETRPSAQSTKAPPHKTKKPGRRRPKTTRSPEVPKSKPALEPATVPPEILVPTIVPKPPQR 589
Cdd:PHA03307 105 SPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETAR 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 590 PKATRRPEAPQIQPAHEPVtfGSEAPALAIVTTTDIAPVISRTKASVTTLAPKSSRPRTRQRPKYKATPSPKIPQTKPAP 669
Cdd:PHA03307 185 APSSPPAEPPPSTPPAAAS--PRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAP 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 670 RQTTSPPPKLKPPHSRRPAKEQVPKGSLHTTSKPKMPPSPEVVDITSVPKDEQLSHKPDPEVSQSETVlpPVTFRVEPPK 749
Cdd:PHA03307 263 ITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTS--SSSESSRGAA 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 750 TTIVPLETRdiplipviSPRPSEeelqttmeqtdqstqelftTKIPRTTELAKTTQAPHRLHTTPVRPRI-PERPHGRPA 828
Cdd:PHA03307 341 VSPGPSPSR--------SPSPSR-------------------PPPPADPSSPRKRPRPSRAPSSPAASAGrPTRRRARAA 393
|
410 420 430
....*....|....*....|....*....|
gi 564376561 829 LNKTTTRPDRTKSRGMSHKNGVGPGTKQTP 858
Cdd:PHA03307 394 VAGRARRRDATGRFPAGRPRPSPLDAGAAS 423
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
621-993 |
3.38e-05 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 48.63 E-value: 3.38e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 621 TTTDIAPVISRTKASVTTLAPKSSRPRTRQRPKYKATPSPKIPQTKPAPRQTTSPPPKLKPPHSR-RPAKEQVPKGSLHT 699
Cdd:PHA03307 72 PPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEmLRPVGSPGPPPAAS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 700 TSKPKMPPSPEVVDITSVPKDEQLSHKPDPEVSQSETVLPPVTFRVEPPKTTIVPLETRDIPLIPVISPRPS---EEELQ 776
Cdd:PHA03307 152 PPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPApgrSAADD 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 777 TTMEQTDQSTQELFTTKIPRTTElakTTQAPHRLHTTPVRPRIPERPHGRPalnkttTRPDRTKSRGMSHKNGVGPGTKQ 856
Cdd:PHA03307 232 AGASSSDSSSSESSGCGWGPENE---CPLPRPAPITLPTRIWEASGWNGPS------SRPGPASSSSSPRERSPSPSPSS 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 857 TPKPSSTGRNTSVDSHATRKPGLIPGTRHRHTSPRPVPPQRKPLPPNNVTGKPGSAGIISSSRATSPPLKATLKPTGTAT 936
Cdd:PHA03307 303 PGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASA 382
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 564376561 937 ERPGAEKKQPTAPASEEEFGNTTDFSSSPTKETDPLGKPRFIGPHVRYipkPDNKPC 993
Cdd:PHA03307 383 GRPTRRRARAAVAGRARRRDATGRFPAGRPRPSPLDAGAASGAFYARY---PLLTPS 436
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
496-657 |
3.58e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 48.17 E-value: 3.58e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 496 RPTTAAPQQTTSIPSTPKRqstpkPPRVKPAPEPETRPSAQSTKAPPhktkkPGRRRPKTTRSPEVPKSKPALEPATVPP 575
Cdd:PRK14951 365 KPAAAAEAAAPAEKKTPAR-----PEAAAPAAAPVAQAAAAPAPAAA-----PAAAASAPAAPPAAAPPAPVAAPAAAAP 434
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 576 eilvptiVPKPPQRPKATRRPEAPQIQPAHEPVtfgseapalAIVTTTDIAPVISRTKASVTTLAPKSSRPRTRQRPKYK 655
Cdd:PRK14951 435 -------AAAPAAAPAAVALAPAPPAQAAPETV---------AIPVRVAPEPAVASAAPAPAAAPAAARLTPTEEGDVWH 498
|
..
gi 564376561 656 AT 657
Cdd:PRK14951 499 AT 500
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
471-949 |
3.68e-05 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 48.24 E-value: 3.68e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 471 PRATLAPSEASFDPRTVEI-FTSPEVRPTTAAPQQTTSIPSTPKRqSTPKPPRVKPAPEPETRPSAQSTKAPPHKTKKPG 549
Cdd:PHA03307 22 PRPPATPGDAADDLLSGSQgQLVSDSAELAAVTVVAGAAACDRFE-PPTGPPPGPGTEAPANESRSTPTWSLSTLAPASP 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 550 RRRPKTTRSPevPKSKPALEPATVPPEILVPTivpkPPQRPKATRRPEAPQIQPAHEPVTFGSEAPALAIVTTTdiapvi 629
Cdd:PHA03307 101 AREGSPTPPG--PSSPDPPPPTPPPASPPPSP----APDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAAS------ 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 630 SRTKASVTTLAPKSSRPrtrqrpkykatpspkiPQTKPAPRQTTSPPPKLKPPHSRRPAKEQVPKGSLhTTSKPKMPPSP 709
Cdd:PHA03307 169 SRQAALPLSSPEETARA----------------PSSPPAEPPPSTPPAAASPRPPRRSSPISASASSP-APAPGRSAADD 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 710 EVVDITSVPKDEQLSHKPDPEvsqSETVLPPVTfrveppkttivpletrdipliPVISPRPSEEELQTTMEQTDqstqel 789
Cdd:PHA03307 232 AGASSSDSSSSESSGCGWGPE---NECPLPRPA---------------------PITLPTRIWEASGWNGPSSR------ 281
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 790 fttkiprttelaKTTQAPHrlhtTPVRPRIPERPHGRPALNKTTTRPDRTKSRGMSHKNGVGPGTKQTPKPSSTGRNTSV 869
Cdd:PHA03307 282 ------------PGPASSS----SSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGP 345
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 870 DSHATRKPGLIPGTRHRHTSPRPVPPQRkplppnnvtgkPGSAGIISSSRATSPPLKATLKPTGTATERPGAEKKQPTAP 949
Cdd:PHA03307 346 SPSRSPSPSRPPPPADPSSPRKRPRPSR-----------APSSPAASAGRPTRRRARAAVAGRARRRDATGRFPAGRPRP 414
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
311-649 |
4.33e-05 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 47.65 E-value: 4.33e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 311 ALPAESKTPEVEKVAGQPVTV--TPETVSRSTKPTLASALDTAETALVLSEKTPETAQSVLIPESELLLSSLAPKGS--P 386
Cdd:pfam17823 129 SLPAAIAALPSEAFSAPRAAAcrANASAAPRAAIAAASAPHAASPAPRTAASSTTAASSTTAASSAPTTAASSAPATltP 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 387 EFPEAKTAFPSEKPGGSLASSEEPWVVPGAKTSEDSRVVQPRTATYDVVSSSATSDETEVEPHTatSDPILDSVPP-KTS 465
Cdd:pfam17823 209 ARGISTAATATGHPAAGTALAAVGNSSPAAGTVTAAVGTVTPAALATLAAAAGTVASAAGTINM--GDPHARRLSPaKHM 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 466 RTAEQPRATLAPSEASFDPRTVEIFTSPEVRPT----TAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQSTKAP 541
Cdd:pfam17823 287 PSDTMARNPAAPMGAQAQGPIIQVSTDQPVHNTagepTPSPSNTTLEPNTPKSVASTNLAVVTTTKAQAKEPSASPVPVL 366
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 542 PhktkkpgrrrpkTTRSPEVPKSKPALEPATVPPeilvptivpkppqrpkaTRRPEAPQIQPAHEPVtfGSEAPAlaivt 621
Cdd:pfam17823 367 H------------TSMIPEVEATSPTTQPSPLLP-----------------TQGAAGPGILLAPEQV--ATEATA----- 410
|
330 340
....*....|....*....|....*...
gi 564376561 622 TTDIAPVISRTKASVTTLAPKSSRPRTR 649
Cdd:pfam17823 411 GTASAGPTPRSSGDPKTLAMASCQLSTQ 438
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
444-680 |
4.47e-05 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 47.61 E-value: 4.47e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 444 TEVEPHTATSDPIlDSVPPKTSRTAEQPratLAPSEASFD--PRTVEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTPKP- 520
Cdd:PLN03209 344 TKPVTPEAPSPPI-EEEPPQPKAVVPRP---LSPYTAYEDlkPPTSPIPTPPSSSPASSKSVDAVAKPAEPDVVPSPGSa 419
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 521 ---PRVKPAPEPETRPSAQSTKAPPHKTKKPGRRRPkttrSPEVPKSKPALEPATVP--PEILVPTIVPKPPQRPKATRR 595
Cdd:PLN03209 420 snvPEVEPAQVEAKKTRPLSPYARYEDLKPPTSPSP----TAPTGVSPSVSSTSSVPavPDTAPATAATDAAAPPPANMR 495
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 596 PEAPQIQPA--HEPVTFGSEAPALAIVTTTDIAPVISRTKASVTTLAPKSSRPRTRQRPkykATPSPKIPQTKPAprqtT 673
Cdd:PLN03209 496 PLSPYAVYDdlKPPTSPSPAAPVGKVAPSSTNEVVKVGNSAPPTALADEQHHAQPKPRP---LSPYTMYEDLKPP----T 568
|
....*..
gi 564376561 674 SPPPKLK 680
Cdd:PLN03209 569 SPTPSPV 575
|
|
| FN3 |
COG3401 |
Fibronectin type 3 domain [General function prediction only]; |
860-1114 |
4.51e-05 |
|
Fibronectin type 3 domain [General function prediction only];
Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 47.69 E-value: 4.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 860 PSSTGRNTSVDSHATRKPGLIPGTRHRHTSPRPVPPQRKPLPPNNVTGKPGSAGIISSSRATSPPLKATLKPTGTATERP 939
Cdd:COG3401 73 AGTTSGVAAVAVAAAPPTATGLTTLTGSGSVGGATNTGLTSSDEVPSPAVGTATTATAVAGGAATAGTYALGAGLYGVDG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 940 GAEKKQPTAPASEEEFGNTTDFSSSPTKETDPLGKPRFIGPHVRYIPKPDN----KPCSITDSVRRFPTEEATEGNATSP 1015
Cdd:COG3401 153 ANASGTTASSVAGAGVVVSPDTSATAAVATTSLTVTSTTLVDGGGDIEPGTtyyyRVAATDTGGESAPSNEVSVTTPTTP 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 1016 PqNPPTNLTVVTVEgcPSFVILDWEKPLNDTVTEYEvISRENGSfSGKNKSIQITNQTFSTVENLKPDTSYEFQVKPKNP 1095
Cdd:COG3401 233 P-SAPTGLTATADT--PGSVTLSWDPVTESDATGYR-VYRSNSG-DGPFTKVATVTTTSYTDTGLTNGTTYYYRVTAVDA 307
|
250 260
....*....|....*....|
gi 564376561 1096 LG-EGPASNTVAFSTESADP 1114
Cdd:COG3401 308 AGnESAPSNVVSVTTDLTPP 327
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
462-684 |
6.22e-05 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 47.07 E-value: 6.22e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 462 PKTSRTAEQPRATLAPSEASFDPrtvEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPpRVKPAPE-PETRPSAQSTKA 540
Cdd:NF033839 308 KEVKPEPETPKPEVKPQLEKPKP---EVKPQPEKPKPEVKPQLETPKPEVKPQPEKPKP-EVKPQPEkPKPEVKPQPETP 383
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 541 PPHKTKKPGRRRPKTTRSPEVPKSKPALEPATVPPEILVPTIVPKPPQRPKatrrPEAPQIQPAHEPVTFGSEAPALAIV 620
Cdd:NF033839 384 KPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQ----PEKPKPEVKPQPEKPKPEVKPQPET 459
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 564376561 621 TTTDIAPVISRTKASV--TTLAPKSSRPRTRQRPKYKATPSPKIPQTKPAPRQTTSPPPKLKPPHS 684
Cdd:NF033839 460 PKPEVKPQPEKPKPEVkpQPEKPKPDNSKPQADDKKPSTPNNLSKDKQPSNQASTNEKATNKPKKS 525
|
|
| fn3 |
pfam00041 |
Fibronectin type III domain; |
116-195 |
7.00e-05 |
|
Fibronectin type III domain;
Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 42.79 E-value: 7.00e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 116 KPLQLVVGTLTPSSVFLSWgflinphhdwTLPSHCSSD-RFYTIRYREKDKEKKWIFQLCPATET--IVENLKPNTVYEF 192
Cdd:pfam00041 2 APSNLTVTDVTSTSLTVSW----------TPPPDGNGPiTGYEVEYRPKNSGEPWNEITVPGTTTsvTLTGLKPGTEYEV 71
|
...
gi 564376561 193 GVK 195
Cdd:pfam00041 72 RVQ 74
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
310-710 |
7.65e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 47.29 E-value: 7.65e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 310 LALPAESKTPE--------VEKVAGQPVTVTPETVSRSTK----PTLASALDTAETALVLSEKTPETAQSVLIPESElll 377
Cdd:PRK07764 362 MLLPSASDDERgllarlerLERRLGVAGGAGAPAAAAPSAaaaaPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPA--- 438
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 378 sslAPKGSPEFPEAKTAFPSEKPGGSLASSEEPWVVPGAKTSEDSRVVQPrtatydvvSSSATSDETEVEPHTATS---- 453
Cdd:PRK07764 439 ---PAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPAPP--------AAPAPAAAPAAPAAPAAPagad 507
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 454 ---------DPILDSVPPKTSRTAE--QPRATLApseaSFDPRTVEI-FTSPEVRPTTAAPQQTTSI------------- 508
Cdd:PRK07764 508 daatlrerwPEILAAVPKRSRKTWAilLPEATVL----GVRGDTLVLgFSTGGLARRFASPGNAEVLvtalaeelggdwq 583
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 509 -------PSTPKRQSTPKPPRVKPAPEPETRPSAQSTKAPPHKTKKPGRRRPKTTRSPEVPKSKPALEPATVPPEILVPT 581
Cdd:PRK07764 584 veavvgpAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDAS 663
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 582 IVPKPPQRPKATRRPEAPQIQPAHEPVTFGSEAPALAIVTTTDIAPVISRTKASVTTLAPKSSRPRTRQRPKYKATPSPK 661
Cdd:PRK07764 664 DGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPP 743
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 564376561 662 IPQTKPAPRQTTSPPPklKPPHSRRPAKEQVPKGSLHTTSKPKMPPSPE 710
Cdd:PRK07764 744 EPDDPPDPAGAPAQPP--PPPAPAPAAAPAAAPPPSPPSEEEEMAEDDA 790
|
|
| FN3 |
COG3401 |
Fibronectin type 3 domain [General function prediction only]; |
1003-1157 |
9.40e-05 |
|
Fibronectin type 3 domain [General function prediction only];
Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 46.53 E-value: 9.40e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 1003 PTEEATEGNATSPPQnPPTNLTVVTVEgcPSFVILDWEKPLNDTVTEYEV--ISRENGSFSGKNKSIqitNQTFSTVENL 1080
Cdd:COG3401 314 PSNVVSVTTDLTPPA-APSGLTATAVG--SSSITLSWTASSDADVTGYNVyrSTSGGGTYTKIAETV---TTTSYTDTGL 387
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 564376561 1081 KPDTSYEFQVKPKNPLG-EGPASNTVAFSTESADPRVSEPISAGRDAIWTERPFNSDSYSECKGKQYVKRTWYKKFVG 1157
Cdd:COG3401 388 TPGTTYYYKVTAVDAAGnESAPSEEVSATTASAASGESLTASVDAVPLTDVAGATAAASAASNPGVSAAVLADGGDTG 465
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
473-688 |
1.07e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 46.77 E-value: 1.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 473 ATLAPSEASFDPRTVEIFTSPEVRPTTAAPQQTTSipSTPKRQSTPKPPRVKPAPEPETRPSAQSTKAPPHK-----TKK 547
Cdd:PRK07003 331 ATVGRGELGLAPDEYAGFTMTLLRMLAFEPAVTGG--GAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTavtgaAGA 408
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 548 PGRRRPKTTRSPEVPKSKPA-LEPATVPPEILVPTIVPKPPQRPKATR-RPEAPQIQPAHEPVTfgseAPALAIVTTTDI 625
Cdd:PRK07003 409 ALAPKAAAAAAATRAEAPPAaPAPPATADRGDDAADGDAPVPAKANARaSADSRCDERDAQPPA----DSGSASAPASDA 484
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 564376561 626 APVISRTKASVTTLAPKSSRPRTRQRPKYKATPSPKIPQtKPAPRQTTSPPPKlkpPHSRRPA 688
Cdd:PRK07003 485 PPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPA-AAAPPAPEARPPT---PAAAAPA 543
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
496-710 |
1.39e-04 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 46.30 E-value: 1.39e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 496 RPTTAAPQQTTSIPSTPKRQSTPKPPRVKP--APEPET----RPSAQSTKAPPHKTKKPGRRRPKTTRSPevpkskPALE 569
Cdd:pfam03154 324 RIHTPPSQSQLQSQQPPREQPLPPAPLSMPhiKPPPTTpipqLPNPQSHKHPPHLSGPSPFQMNSNLPPP------PALK 397
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 570 PATVPPEILVPTIVPKPPQRPKATRRPEAPQIQPAHEPVTFGSEAPALAIVTTTDIAPVISRTKASVTTLAPKSSRPRTr 649
Cdd:pfam03154 398 PLSSLSTHHPPSAHPPPLQLMPQSQQLPPPPAQPPVLTQSQSLPPPAASHPPTSGLHQVPSQSPFPQHPFVPGGPPPIT- 476
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 650 qrpkykatpSPKIPQTKPAPRQTTSPPPKLKPPHSRRPAKE---------QVPKGSLHTTSKPKMPPSPE 710
Cdd:pfam03154 477 ---------PPSGPPTSTSSAMPGIQPPSSASVSSSGPVPAavscplppvQIKEEALDEAEEPESPPPPP 537
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
483-952 |
1.54e-04 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 46.21 E-value: 1.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 483 DPRTVEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQSTKAP----PHKTKKPGRRRPKTTRS 558
Cdd:PHA03378 419 DPSVIKAIEEEHRKKKAARTEQPRATPHSQAPTVVLHRPPTQPLEGPTGPLSVQAPLEPwqplPHPQVTPVILHQPPAQG 498
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 559 PEVPKSKPAL--EPATVPPEILVPTIVPKPPQRPKATRRpeAPQIQpaHEPVTFGSEAPALAIVTTTDIAPVISRTKASV 636
Cdd:PHA03378 499 VQAHGSMLDLleKDDEDMEQRVMATLLPPSPPQPRAGRR--APCVY--TEDLDIESDEPASTEPVHDQLLPAPGLGPLQI 574
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 637 TTLAPKSSRPRTRQRPKYKATPSPKI-PQTKPAPRQTTSPPPKLKPPHSRRPAKEQVPKGSLHTTSKPKMPP-------S 708
Cdd:PHA03378 575 QPLTSPTTSQLASSAPSYAQTPWPVPhPSQTPEPPTTQSHIPETSAPRQWPMPLRPIPMRPLRMQPITFNVLvfptphqP 654
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 709 PEVVDITSVPKDEQLSHKP-DPEVSQSETVLPP--VTFRVEPPKTTIVPLETRDIPliPVISPRPSEEELQTTMEQTDQS 785
Cdd:PHA03378 655 PQVEITPYKPTWTQIGHIPyQPSPTGANTMLPIqwAPGTMQPPPRAPTPMRPPAAP--PGRAQRPAAATGRARPPAAAPG 732
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 786 TQELFTTKIPRTTELAKTTQAPHRLHTTPVRPRIPERPHGRPALNKTTTRPDRTKSRGMS-----HKNGVGPGTKQTPKP 860
Cdd:PHA03378 733 RARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGAPTPQPPPQAPPAPQQRPRGaptpqPPPQAGPTSMQLMPR 812
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 861 SSTGRNTSVdSHATRKPGLIPGTRHRHTSPRPVPPQR-KPLPPNNVTGKPGSAGIISSSRATSPPLKATLKPTGTATERP 939
Cdd:PHA03378 813 AAPGQQGPT-KQILRQLLTGGVKRGRPSLKKPAALERqAAAGPTPSPGSGTSDKIVQAPVFYPPVLQPIQVMRQLGSVRA 891
|
490
....*....|...
gi 564376561 940 GAEKKQPTAPASE 952
Cdd:PHA03378 892 AAASTVTQAPTEY 904
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
427-618 |
1.65e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 46.02 E-value: 1.65e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 427 PRTATYDVVSSSATSDETEVEPHTATSDPILDSVPPKTSRTAEQPRAtlAPSEASFDPRTVEIFTSPEVRPTTAAPQQTT 506
Cdd:PRK12323 375 ATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAA--APARRSPAPEALAAARQASARGPGGAPAPAP 452
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 507 SIPSTPKRQSTP--KPPRVKP--APEPETRPSAQSTKAPPHKTKKPGRRRPKTTRSPEVPKSKPAL---------EPATV 573
Cdd:PRK12323 453 APAAAPAAAARPaaAGPRPVAaaAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPagwvaesipDPATA 532
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 564376561 574 PPEILVPTIVPKPPQ----RPKATRRPEAPQIQPAHE----PVTFGSEAPALA 618
Cdd:PRK12323 533 DPDDAFETLAPAPAAapapRAAAATEPVVAPRPPRASasglPDMFDGDWPALA 585
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
525-710 |
2.47e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 45.61 E-value: 2.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 525 PAPEPETRPSAQSTKAPPHKTKKPGRRRPKTTRSPEVPKSKPALEPATVPPEilvptivpKPPQRPKATRRPEAPQIQPA 604
Cdd:PRK07003 360 PAVTGGGAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALA--------PKAAAAAAATRAEAPPAAPA 431
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 605 hePVTFGSEApalaivTTTDIAPVISRTKASVTTLAPKSSRPRTRQRPKYKATPSPKIPQTKPAPRQTTSPPPKLKPPHS 684
Cdd:PRK07003 432 --PPATADRG------DDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAAT 503
|
170 180
....*....|....*....|....*.
gi 564376561 685 RRPAKEQVPKGSLHTTSKPKMPPSPE 710
Cdd:PRK07003 504 PAAVPDARAPAAASREDAPAAAAPPA 529
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
311-677 |
3.05e-04 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 45.29 E-value: 3.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 311 ALPAESKTPEVEKVAGQPVTVTPETV------SRSTKPTLAS---ALDTAETALVLSEKTPE--TAQSVLIPE-SELLLS 378
Cdd:pfam05109 395 GLGTAPKTLIITRTATNATTTTHKVIfskapeSTTTSPTLNTtgfAAPNTTTGLPSSTHVPTnlTAPASTGPTvSTADVT 474
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 379 SLAPKGSPEFPEAKTAFPSEKPGGSLASSEEPWVVPGAKTSEDSRVVQPRTATYDVVSSSATSDETEVEPHTATSDPILD 458
Cdd:pfam05109 475 SPTPAGTTSGASPVTPSPSPRDNGTESKAPDMTSPTSAVTTPTPNATSPTPAVTTPTPNATSPTLGKTSPTSAVTTPTPN 554
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 459 SVPPKTSRTAEQPRATL------APSEASFDP--------------------------RTVEIFTSPEVRPTTAAPQQTT 506
Cdd:pfam05109 555 ATSPTPAVTTPTPNATIptlgktSPTSAVTTPtpnatsptvgetspqanttnhtlggtSSTPVVTSPPKNATSAVTTGQH 634
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 507 SIPSTPKRQSTPKPPRVKPAPEPETRPSAQS-----TKAPPHKTKKPGRRRPKTTRSPEVPKSKPALEPATV-------- 573
Cdd:pfam05109 635 NITSSSTSSMSLRPSSISETLSPSTSDNSTShmpllTSAHPTGGENITQVTPASTSTHHVSTSSPAPRPGTTsqasgpgn 714
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 574 ------PPEILVPTIVPkppqrPKATRRPEAPQIQPAHEPVTFGSEAPALAIVTTTDIAPVISRTKASVTT-LAPKSSRP 646
Cdd:pfam05109 715 sststkPGEVNVTKGTP-----PKNATSPQAPSGQKTAVPTVTSTGGKANSTTGGKHTTGHGARTSTEPTTdYGGDSTTP 789
|
410 420 430
....*....|....*....|....*....|..
gi 564376561 647 RTRqrpkYKATPS-PKIPQTKPAPRQTTSPPP 677
Cdd:pfam05109 790 RTR----YNATTYlPPSTSSKLRPRWTFTSPP 817
|
|
| TALPID3 |
pfam15324 |
Hedgehog signalling target; TALPID3 is a family of eukaryotic proteins that are targets for ... |
556-786 |
3.11e-04 |
|
Hedgehog signalling target; TALPID3 is a family of eukaryotic proteins that are targets for Hedgehog signalling. Mutations in this gene noticed first in chickens lead to multiple abnormalities of development.
Pssm-ID: 434634 [Multi-domain] Cd Length: 1288 Bit Score: 45.26 E-value: 3.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 556 TRSPEVPKSKPALEPATVPP-EILVPTIVPKPPQRPKATRRPEAPQIQP-AHEPVTFGSEAPALAIVTTTDIAPVISRTK 633
Cdd:pfam15324 964 QREPPVAASVPGDLPTKETLlPTPVPTPQPTPPCSPPSPLKEPSPVKTPdSSPCVSEHDFFPVKEIPPEKGADTGPAVSL 1043
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 634 ASVTTLAPKSSRPRTrqrpkykATPSPKIPQTKPAPRQTTSPPPKLKPPHSRRPAKEQVPKgslhtTSKPKMPPSPEVVd 713
Cdd:pfam15324 1044 VITPTVTPIATPPPA-------ATPTPPLSENSIDKLKSPSPELPKPWEDSDLPLEEENPN-----SEQEELHPRAVVM- 1110
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 564376561 714 itSVPKDEqlshkpdpevsQSETVLPPVTfRVEPPKTTIVPLETRDIPLIPVISPRPSEEELQTTMEQTDQST 786
Cdd:pfam15324 1111 --SVARDE-----------EPESVVLPAS-PPEPKPLAPPPLGAAPPSPPQSPSSSSSTLESSSSLTVTETET 1169
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
538-959 |
3.23e-04 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 45.29 E-value: 3.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 538 TKAPPHKTKKP-----GRRRPKTT----RSPEVPKSKPAlePATVPPEILVPTIVPKPPQRPKATRRPEAPQIQPAHEPV 608
Cdd:pfam05109 422 SKAPESTTTSPtlnttGFAAPNTTtglpSSTHVPTNLTA--PASTGPTVSTADVTSPTPAGTTSGASPVTPSPSPRDNGT 499
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 609 TfgSEAPALAIVTTTDIAPVISRTKAS--VTTLAPKSSRPRTRQRPKYKATPSPKIPQTKPAPRQTTSPPPKLKPPHSRR 686
Cdd:pfam05109 500 E--SKAPDMTSPTSAVTTPTPNATSPTpaVTTPTPNATSPTLGKTSPTSAVTTPTPNATSPTPAVTTPTPNATIPTLGKT 577
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 687 PAKEQVpkgslhTTSKPKmPPSPEVVDITsvPKDEQLSHKPDPEVSQSETVLPP--VTFRVEPPKTTIVPLETRDIPLip 764
Cdd:pfam05109 578 SPTSAV------TTPTPN-ATSPTVGETS--PQANTTNHTLGGTSSTPVVTSPPknATSAVTTGQHNITSSSTSSMSL-- 646
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 765 viSPRPSEEELQTTMEQTDQSTQELFTTKIP----RTTELAKTTQAPHRLHTTPVRPRIPERPHGR-PALNKTTTRPDRT 839
Cdd:pfam05109 647 --RPSSISETLSPSTSDNSTSHMPLLTSAHPtggeNITQVTPASTSTHHVSTSSPAPRPGTTSQASgPGNSSTSTKPGEV 724
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 840 K-SRGMSHKNGVGPgtkQTPkpssTGRNTSVDSHATRKPGLIPGTRHRHTSPRPVPPQRKplPPNNVTGKPGSAGIISSS 918
Cdd:pfam05109 725 NvTKGTPPKNATSP---QAP----SGQKTAVPTVTSTGGKANSTTGGKHTTGHGARTSTE--PTTDYGGDSTTPRTRYNA 795
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 564376561 919 RATSPPLKAT-LKPTGTATERP--GAEKKQPTAPASEEEFGNTT 959
Cdd:pfam05109 796 TTYLPPSTSSkLRPRWTFTSPPvtTAQATVPVPPTSQPRFSNLS 839
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
311-616 |
4.56e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 44.78 E-value: 4.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 311 ALPAESKTPEVEKVAGQPVTVTPETVSRSTKPTL-----ASALDTAETALVLSEKTPETAQSVLIPESELLLSSLAPKGS 385
Cdd:PHA03307 124 ASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGAspaavASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAAS 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 386 PefpeaktafPSEKPGGSLASSEEPWVVPGAKTSEDSRVVQPRtatydvVSSSATSDETEVEPHTATSDPildsvPPKTS 465
Cdd:PHA03307 204 P---------RPPRRSSPISASASSPAPAPGRSAADDAGASSS------DSSSSESSGCGWGPENECPLP-----RPAPI 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 466 RTAEQPRATLAPSEASFDPRTVEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRP-SAQSTKAPPHK 544
Cdd:PHA03307 264 TLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSsSESSRGAAVSP 343
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 564376561 545 TKKPGR-RRPKTTRSPEVPKSKPALEPATVPPEilvPTIVPKPPQRPKATRRPEAPQIQPAHEPVTFGSEAPA 616
Cdd:PHA03307 344 GPSPSRsPSPSRPPPPADPSSPRKRPRPSRAPS---SPAASAGRPTRRRARAAVAGRARRRDATGRFPAGRPR 413
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
116-195 |
4.96e-04 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 40.56 E-value: 4.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 116 KPLQLVVGTLTPSSVFLSWgfliNPHHDWTLPSHcssdrFYTIRYREKDKE--KKWIFQLCPATETIVENLKPNTVYEFG 193
Cdd:cd00063 3 PPTNLRVTDVTSTSVTLSW----TPPEDDGGPIT-----GYVVEYREKGSGdwKEVEVTPGSETSYTLTGLKPGTEYEFR 73
|
..
gi 564376561 194 VK 195
Cdd:cd00063 74 VR 75
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
493-709 |
5.06e-04 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 44.15 E-value: 5.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 493 PEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPEtRPSAQSTKA----------PPHKTKKPGRRRPKTTRSPEVP 562
Cdd:PLN03209 324 PSQRVPPKESDAADGPKPVPTKPVTPEAPSPPIEEEPP-QPKAVVPRPlspytayedlKPPTSPIPTPPSSSPASSKSVD 402
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 563 KSKPALEPATVPPEILVPTI-VPKPPQRPKATRRPEAPQIQ-PAHEPVTFGSEAPALAIVTTTDIAPVISRT------KA 634
Cdd:PLN03209 403 AVAKPAEPDVVPSPGSASNVpEVEPAQVEAKKTRPLSPYARyEDLKPPTSPSPTAPTGVSPSVSSTSSVPAVpdtapaTA 482
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 564376561 635 SVTTLAPKSSRPRTRQRPKYKATPSPKIPQTKPAPRQTTSPPPKLKPPHSRRPAKEQVPKGSLHTTSKPKMPPSP 709
Cdd:PLN03209 483 ATDAAAPPPANMRPLSPYAVYDDLKPPTSPSPAAPVGKVAPSSTNEVVKVGNSAPPTALADEQHHAQPKPRPLSP 557
|
|
| PBP1 |
COG5180 |
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification]; ... |
345-754 |
5.48e-04 |
|
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification];
Pssm-ID: 444064 [Multi-domain] Cd Length: 548 Bit Score: 44.28 E-value: 5.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 345 ASALDTAETALVlsEKTPETAQSVLIPESELLLSSLAPKGSPEFPEAKTAFPSEKPGGSLASSEEPWVVPGAKTSEDSRV 424
Cdd:COG5180 44 RSALASSPTRPY--ARKIFEPLDIKLALGKPQLPSVAEPEAYLDPAPPKSSPDTPEEQLGAPAGDLLVLPAAKTPELAAG 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 425 VQPRTATYDVVSSSATSDETEVEphtatsdpildSVPPKTSRTAEQPRATLAPSEASFDPRTVEIFTSPEVRPTTAAPQQ 504
Cdd:COG5180 122 ALPAPAAAAALPKAKVTREATSA-----------SAGVALAAALLQRSDPILAKDPDGDSASTLPPPAEKLDKVLTEPRD 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 505 TTSIPSTPKRQstPKPPRVKPAPEpetrpsaqstkAPPHKTKKPGRRRPKTTRSPEVPKSKPA---LEPATVP--PEILV 579
Cdd:COG5180 191 ALKDSPEKLDR--PKVEVKDEAQE-----------EPPDLTGGADHPRPEAASSPKVDPPSTSearSRPATVDaqPEMRP 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 580 PTIVPKPPQRPKATRRPEAPQIQPAHEPVTFG-SEAPALAIVTTTDIAPVISRTKASVTTLAPKSSRPRTRQRPKY---- 654
Cdd:COG5180 258 PADAKERRRAAIGDTPAAEPPGLPVLEAGSEPqSDAPEAETARPIDVKGVASAPPATRPVRPPGGARDPGTPRPGQpter 337
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 655 -KATPSPKIPQTKP---APRQTTSPPPKLKPPHSRRPAKEQVPKGSLHTTSKPKMPPSPEVVDITSVPKDEQLSHkPDPE 730
Cdd:COG5180 338 pAGVPEAASDAGQPpsaYPPAEEAVPGKPLEQGAPRPGSSGGDGAPFQPPNGAPQPGLGRRGAPGPPMGAGDLVQ-AALD 416
|
410 420
....*....|....*....|....*.
gi 564376561 731 VSQSETV--LPPVTFRVEPPKTTIVP 754
Cdd:COG5180 417 GGGRETAslGGAAGGAGQGPKADFVP 442
|
|
| GGN |
pfam15685 |
Gametogenetin; GGN is a family of proteins largely found in mammals. It reacts with POG in the ... |
500-706 |
5.90e-04 |
|
Gametogenetin; GGN is a family of proteins largely found in mammals. It reacts with POG in the maturation of sperm and is expressed virtually only in the testis. It is found to be associated with the intracellular membrane, binds with GGNBP1 and may be involved in vesicular trafficking.
Pssm-ID: 434857 [Multi-domain] Cd Length: 668 Bit Score: 43.99 E-value: 5.90e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 500 AAPQQTTSIPSTPkrQSTPKPPRVKPAPEPETRPSAQSTKAPP------HKTKKPGRRRPKTTRS--PEVPKSKPALEPA 571
Cdd:pfam15685 377 GAPRRRAAALSGP--WGSPPPPPGKAHPIPGPRRPAPALLAPPmfifpaPTNGEPVRPGPPAPQAllPRPPPPTPPATPP 454
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 572 TVPPEIlvpTIVPKPPQRPKATRRPEAPQIQPAHepvtfgsEAPALAIVTTTDIAPVISRTKAsvttlapkssrprtrQR 651
Cdd:pfam15685 455 PVPPPI---PQLPALQPMPLAAARPPTPRPCPGH-------GESALAPAPTAPLPPALAADQA---------------PA 509
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 564376561 652 PKYKATPSpkiPQTKPAPrQTTSPPPKLKPPHSRRPAKEQVPKGSLHTTSKPKMP 706
Cdd:pfam15685 510 PALAAAPA---PSPAPAP-ATADPLPPAPAPIKARTRKNKGPRAARGATREDGAP 560
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
682-1021 |
6.12e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 44.54 E-value: 6.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 682 PHSRRPAKEQVPkgslhttSKPKMPPSPEVvditsvpkdeqlSHKPDPEVSQSETVLPPVTFRVEPPKTTIVP------- 754
Cdd:PHA03247 2478 PVYRRPAEARFP-------FAAGAAPDPGG------------GGPPDPDAPPAPSRLAPAILPDEPVGEPVHPrmltwir 2538
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 755 ----LETRDI----PLIPVISPRPSeeelqttmeqTDQSTQElfTTKIPRTTELAKTTQAphrlhttpVRPRIPERPhGR 826
Cdd:PHA03247 2539 gleeLASDDAgdppPPLPPAAPPAA----------PDRSVPP--PRPAPRPSEPAVTSRA--------RRPDAPPQS-AR 2597
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 827 PalnkTTTRPDRTKSRGMSHKNGVGPGTKQTPKPSSTGRntsvdSHATRKPGlipgtrhRHTSPRPVPPQRKPLPPNNVT 906
Cdd:PHA03247 2598 P----RAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPS-----PAANEPDP-------HPPPTVPPPERPRDDPAPGRV 2661
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 907 GKPGSAGIISSSRATSPPLKATLKPTGTATERPGAEKKQPTAPASEEEFGNTTDFSSSPTKETDPLGKPRFIGPHVRYIP 986
Cdd:PHA03247 2662 SRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAP 2741
|
330 340 350
....*....|....*....|....*....|....*.
gi 564376561 987 KPDNKPCSITDSVRRFPTEEATEG-NATSPPQNPPT 1021
Cdd:PHA03247 2742 PAVPAGPATPGGPARPARPPTTAGpPAPAPPAAPAA 2777
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
558-743 |
6.64e-04 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 44.31 E-value: 6.64e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 558 SPEVPKSKPALEPATVP-PEILVPTIVPKPPQRPKATR--RPEAPQIQPAHEPVTFGSEAPALAIVTTTdiapvisrtka 634
Cdd:PRK10263 348 SVDVPPAQPTVAWQPVPgPQTGEPVIAPAPEGYPQQSQyaQPAVQYNEPLQQPVQPQQPYYAPAAEQPA----------- 416
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 635 svttlapkssrprtrQRPKYKATPSPKIPQTKPAPRQTTspPPKLKPPHSRRPAKEQVPKGSLHTTSKPKMPPSPEVVDI 714
Cdd:PRK10263 417 ---------------QQPYYAPAPEQPAQQPYYAPAPEQ--PVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQ 479
|
170 180
....*....|....*....|....*....
gi 564376561 715 TSVPKDEQLSHKPDPEVSQSETVLPPVTF 743
Cdd:PRK10263 480 QPQPVEQQPVVEPEPVVEETKPARPPLYY 508
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
482-634 |
6.85e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 44.09 E-value: 6.85e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 482 FDPRTVEifTSPEVRPTTAAPQQTTSIPSTPkRQSTPKPPRVKPAPEPETRPSAQSTKAPPHKTKKPGRRRPKTTRSPEV 561
Cdd:PRK07994 359 FHPAAPL--PEPEVPPQSAAPAASAQATAAP-TAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGA 435
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 564376561 562 PKSKPALEPATVPPEILVPTIVPKPPQRPKATRRPEAPQIQPAHEPV-TFGSEAPALAIVTTTDIAPVISRTKA 634
Cdd:PRK07994 436 TKAKKSEPAAASRARPVNSALERLASVRPAPSALEKAPAKKEAYRWKaTNPVEVKKEPVATPKALKKALEHEKT 509
|
|
| NESP55 |
pfam06390 |
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian ... |
436-568 |
6.96e-04 |
|
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian neuroendocrine-specific golgi protein P55 (NESP55) sequences. NESP55 is a novel member of the chromogranin family and is a soluble, acidic, heat-stable secretory protein that is expressed exclusively in endocrine and nervous tissues, although less widely than chromogranins.
Pssm-ID: 115071 [Multi-domain] Cd Length: 261 Bit Score: 42.93 E-value: 6.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 436 SSSATSDETEVEPHTATSDPILDSVPPKTSrtAEQPRATLAPSEASFDPRTVEIFTSPEVRPTTAAP---QQTTSIPSTP 512
Cdd:pfam06390 122 PESDIESETEFETEPETEPDTAPTTEPETE--PEDEPGPVVPKGATFHQSLTERLHALKLQSADASPrraPPSTQEPESA 199
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 513 KRQSTPKPPRVKPAP-EPETRPSA-QSTKAPPH--KTKKPGRRRPKttrSPEVPKSKPAL 568
Cdd:pfam06390 200 REGEEPERGPLDKDPrDPEEEEEEkEEEKQQPHrcKPKKPARRRDP---SPESPPKKGAI 256
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
481-576 |
8.05e-04 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 43.73 E-value: 8.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 481 SFDPRTVEIFTSPEVRPTTAAPQQTTsIPSTPKRQSTPKPPRVKPAPEPETRPSAQSTKAPPhktkKPGRRRPKTTRSPE 560
Cdd:PRK12270 24 SVDPSWREFFADYGPGSTAAPTAAAA-AAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPP----KPAAAAAAAAAPAA 98
|
90
....*....|....*.
gi 564376561 561 VPKSKPALEPATVPPE 576
Cdd:PRK12270 99 PPAAAAAAAPAAAAVE 114
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
448-599 |
9.07e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 43.70 E-value: 9.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 448 PHTATSDPildSVPPKTSRTAEQPRATLAPSEASFDPRTVEIFTSPEVRPTTAAPQQTTSIPST--------PKRQSTPK 519
Cdd:PRK07994 361 PAAPLPEP---EVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQllaarqqlQRAQGATK 437
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 520 PPRVKPAPEPETRPSAQSTKAPPHKtkkpgrrRPKTTRSPEVPKSKPALEPATVPPEILVPTIVPKPPQRPKATRRPEAP 599
Cdd:PRK07994 438 AKKSEPAAASRARPVNSALERLASV-------RPAPSALEKAPAKKEAYRWKATNPVEVKKEPVATPKALKKALEHEKTP 510
|
|
| FN3 |
smart00060 |
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
117-195 |
1.12e-03 |
|
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 39.13 E-value: 1.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 117 PLQLVVGTLTPSSVFLSWgflinphhdwtLPSHCSSDRFYTIRYREKDKEKKWIFQLCPA----TETIVENLKPNTVYEF 192
Cdd:smart00060 4 PSNLRVTDVTSTSVTLSW-----------EPPPDDGITGYIVGYRVEYREEGSEWKEVNVtpssTSYTLTGLKPGTEYEF 72
|
...
gi 564376561 193 GVK 195
Cdd:smart00060 73 RVR 75
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
492-604 |
1.49e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 43.00 E-value: 1.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 492 SPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQSTKAPPHKTKKPGRRRPKTTRSPEVPKSKPALEPA 571
Cdd:PHA03247 379 SLPTRKRRSARHAATPFARGPGGDDQTRPAAPVPASVPTPAPTPVPASAPPPPATPLPSAEPGSDDGPAPPPERQPPAPA 458
|
90 100 110
....*....|....*....|....*....|...
gi 564376561 572 TVPPEILVPTIVPKPPQRPKATRRPEAPQIQPA 604
Cdd:PHA03247 459 TEPAPDDPDDATRKALDALRERRPPEPPGADLA 491
|
|
| PHA03377 |
PHA03377 |
EBNA-3C; Provisional |
416-647 |
1.58e-03 |
|
EBNA-3C; Provisional
Pssm-ID: 177614 [Multi-domain] Cd Length: 1000 Bit Score: 42.73 E-value: 1.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 416 AKTSEDSRVvQPRTATYDVVSSSATSDETEVEPHTATSDPILDSVPPKTS--RTAEQPRATLAPSEASFDPRTVEI---- 489
Cdd:PHA03377 698 AQPSEESHL-SSMSPTQPISHEEQPRYEDPDDPLDLSLHPDQAPPPSHQApySGHEEPQAQQAPYPGYWEPRPPQApylg 776
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 490 FTSPEVRPTTAAPQQTTSIPSTPKRQS-----------------------TPKPPRVKPAPEPETRPSAQSTKAPPHKTK 546
Cdd:PHA03377 777 YQEPQAQGVQVSSYPGYAGPWGLRAQHpryrhswaywsqypghghpqgpwAPRPPHLPPQWDGSAGHGQDQVSQFPHLQS 856
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 547 KPGRRRPKTTRSPEVPKSKPaLEPATVPPEILVPtivPKPPQRPKATRRPEAPqiQPAHEPVTFGSEAPALAIVTTTDIA 626
Cdd:PHA03377 857 ETGPPRLQLSQVPQLPYSQT-LVSSSAPSWSSPQ---PRAPIRPIPTRFPPPP--MPLQDSMAVGCDSSGTACPSMPFAS 930
|
250 260
....*....|....*....|.
gi 564376561 627 PVISRTKASVTTLAPKSSRPR 647
Cdd:PHA03377 931 DYSQGAFTPLDINAQTPKRPR 951
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
552-736 |
1.69e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 42.55 E-value: 1.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 552 RPKTTrSPEVPKSKPALEPATVPPEILVPTIVPKPPQRPKAtrrPEAPQIQPAHEPVTFGSEAPALAIVTTTDIAPVISR 631
Cdd:PRK07994 360 HPAAP-LPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAV---PPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGA 435
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 632 TKasvttlaPKSSRPRTRQRPKYKATPSPKIPQTKPAPRQTTSPPPKlKPPHSRRPAKEQVPKGSLHTTskPKMPPSPEV 711
Cdd:PRK07994 436 TK-------AKKSEPAAASRARPVNSALERLASVRPAPSALEKAPAK-KEAYRWKATNPVEVKKEPVAT--PKALKKALE 505
|
170 180 190
....*....|....*....|....*....|
gi 564376561 712 VDITS--VPKDEQLSHKPDP---EVSQSET 736
Cdd:PRK07994 506 HEKTPelAAKLAAEAIERDPwaaLVSQLGL 535
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
462-618 |
2.00e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 42.55 E-value: 2.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 462 PKTSRTA-EQPRATLAPSEASfdPRTVEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQSTKA 540
Cdd:PRK07994 361 PAAPLPEpEVPPQSAAPAASA--QATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKA 438
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 541 PPHKTKKPGRRRPKTT---RSPEVPKSKPALEPATVPPEILVPTIVPKPPQRPKATRRPEAPQIQPAHEPvtfgseAPAL 617
Cdd:PRK07994 439 KKSEPAAASRARPVNSaleRLASVRPAPSALEKAPAKKEAYRWKATNPVEVKKEPVATPKALKKALEHEK------TPEL 512
|
.
gi 564376561 618 A 618
Cdd:PRK07994 513 A 513
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
610-710 |
2.07e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 42.49 E-value: 2.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 610 FGSEAPALAIVTTTdIAPVISRTKASVTTLAPKSSRPR----TRQRPKYKATPSPKIPQTKPAPRQTTSPPPKLKPPHSR 685
Cdd:PRK14950 346 YGQLPLELAVIEAL-LVPVPAPQPAKPTAAAPSPVRPTpapsTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHT 424
|
90 100
....*....|....*....|....*
gi 564376561 686 RPAKEQVPKGSLHTTSKPKMPPSPE 710
Cdd:PRK14950 425 PESAPKLTRAAIPVDEKPKYTPPAP 449
|
|
| dnaA |
PRK14086 |
chromosomal replication initiator protein DnaA; |
451-654 |
2.14e-03 |
|
chromosomal replication initiator protein DnaA;
Pssm-ID: 237605 [Multi-domain] Cd Length: 617 Bit Score: 42.12 E-value: 2.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 451 ATSDPILDSVPPKTsrtaEQPRATLAPSEASFDPRTVEIFTSPE---VRPTTA-APQQTTSIPSTPKRQSTPKP---PRv 523
Cdd:PRK14086 86 ITVDPSAGEPAPPP----PHARRTSEPELPRPGRRPYEGYGGPRaddRPPGLPrQDQLPTARPAYPAYQQRPEPgawPR- 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 524 KPAPEPETRPSAQSTKAPPHKTKKPGRRRPKTTRSPEvPKSKPALEPATVPPEilvptiVPKPPQRPKATRRPEAPQIQP 603
Cdd:PRK14086 161 AADDYGWQQQRLGFPPRAPYASPASYAPEQERDREPY-DAGRPEYDQRRRDYD------HPRPDWDRPRRDRTDRPEPPP 233
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 564376561 604 -AHEPVTFGSEAPALAIVTTTDIAPVISRTKASVTTLAPKSSRPRTRQRPKY 654
Cdd:PRK14086 234 gAGHVHRGGPGPPERDDAPVVPIRPSAPGPLAAQPAPAPGPGEPTARLNPKY 285
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
458-541 |
2.51e-03 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 40.76 E-value: 2.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 458 DSVPPKTSRTAEQP--------RATLAPSEASFDPRTVEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEP 529
Cdd:PRK11633 54 DMMPAATQALPTQPpegaaeavRAGDAAAPSLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQKVEAPPAPKP 133
|
90
....*....|..
gi 564376561 530 ETRPSAQSTKAP 541
Cdd:PRK11633 134 EPKPVVEEKAAP 145
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
358-717 |
2.67e-03 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 41.98 E-value: 2.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 358 SEKTPETAQSVLIPESELLLSSLAPKGSPEFPEAKTAFPSEKPGGSLASSEEPWVVPGAKTSEdsrvvqprtatydvvss 437
Cdd:PTZ00449 596 KPKRPRSAQRPTRPKSPKLPELLDIPKSPKRPESPKSPKRPPPPQRPSSPERPEGPKIIKSPK----------------- 658
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 438 SATSDETEVEPhtATSDPILDSVPPKTSRTAEQprATLAPSEASFDPrtveifTSPEVRPTTAAPQQTTSIPSTPKRQST 517
Cdd:PTZ00449 659 PPKSPKPPFDP--KFKEKFYDDYLDAAAKSKET--KTTVVLDESFES------ILKETLPETPGTPFTTPRPLPPKLPRD 728
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 518 PKPPRVKPAPEPETRPSAQSTKAPPHKtkkpgrrrpKTTRSPEVPKSKPAlePATVPPEILVPTIVPKPPQRPKATRRPE 597
Cdd:PTZ00449 729 EEFPFEPIGDPDAEQPDDIEFFTPPEE---------ERTFFHETPADTPL--PDILAEEFKEEDIHAETGEPDEAMKRPD 797
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 598 APQiqpAHEPVTFGSEaPALAI---------VTTTDIAPVISRTKASVTTLAPKSSRPRT-------RQRPKYKATPSPK 661
Cdd:PTZ00449 798 SPS---EHEDKPPGDH-PSLPKkrhrldglaLSTTDLESDAGRIAKDASGKIVKLKRSKSfddlttvEEAEEMGAEARKI 873
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 662 I--PQTKPAPRQTTSPPPK--LKPPHSRRPAKEQVPKGSLHTTSKPKMPPSPEVVDITSV 717
Cdd:PTZ00449 874 VvdDDGTEADDEDTHPPEEkhKSEVRRRRPPKKPSKPKKPSKPKKPKKPDSAFIPSIIAI 933
|
|
| Not5 |
COG5665 |
CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription]; |
308-685 |
3.61e-03 |
|
CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription];
Pssm-ID: 444384 [Multi-domain] Cd Length: 874 Bit Score: 41.57 E-value: 3.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 308 ETLALPAESKTPEVEKVAGQpvtvTPETVSRSTKPTLASaldtaeTALVLSEKTPETAQSVLIPESELLLSSLAPKGS-- 385
Cdd:COG5665 102 EPLGRLVASTGLNASGVSAN----SAATIAPGANATLTS------SAGADSLQASSEMALWGPRRVALVVRDGASNPVav 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 386 -PEFPEAKTAFPSEKPGGSLASseepwvVPGAKTSEDSrvvQPRTATYDVVSSSATSDETEVEP-------HTATSDPIL 457
Cdd:COG5665 172 vVTTMIAVPSAPAAPPNAVDYS------VLVPIAAQDP---AASVSTPQAFNASATSGRSQHIVqaakrvgVEWWGDPSL 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 458 DSVPPKTSRTAEQPRATLAPSEASFDPRTVEIFTSPEVR--------------PTTAAPQQTTSIPSTPKRQSTPKPPRV 523
Cdd:COG5665 243 LATPPATPATEEKSSQQPKSQPTSPSGGTTPPSTNQLTTsntptstakaqpqpPTKKQPAKEPPSDTASGNPSAPSVLIN 322
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 524 KPAPEPEtrPSAQSTKAPPHKTKKPGR--RRPKTTRSPEVPKSKPALEPATVPPEIlvpTIVPKPPQRPKATRRPEAPQI 601
Cdd:COG5665 323 SDSPTSE--DPATASVPTTEETTAFTTpsSVPSTPAEKDTPATDLATPVSPTPPET---SVDKKVSPDSATSSTKSEKEG 397
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 602 QPAHEPVTFGSEAPALAIVTTTDIAPVISRTKASVTTLAPKSSRPRT--RQRPKYKA-TPSPKIPQTKPAPRQTTSPPPK 678
Cdd:COG5665 398 GTASSPMPPNIAIGAKDDVDATDPSQEAKEYTKNAPMTPEADSAPESsvRTEASPSAgSDLEPENTTLRDPAPNAIPPPE 477
|
....*..
gi 564376561 679 LKPPHSR 685
Cdd:COG5665 478 DPSTIGR 484
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
475-619 |
3.67e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 41.33 E-value: 3.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 475 LAPSEASFDPRTVeiftspevrPTTAAPQqttsipstpkrqsTPKPPRVKPAPEPETRPSAQSTKAPPHKtkkpgrrrpk 554
Cdd:PRK14950 353 LAVIEALLVPVPA---------PQPAKPT-------------AAAPSPVRPTPAPSTRPKAAAAANIPPK---------- 400
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 564376561 555 ttrsPEVPKSKPalePATVPPEILVPTIVPKPPQRPKATRRPEAPQIQPAHEPVTFGSEAPALAI 619
Cdd:PRK14950 401 ----EPVRETAT---PPPVPPRPVAPPVPHTPESAPKLTRAAIPVDEKPKYTPPAPPKEEEKALI 458
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
506-659 |
4.02e-03 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 40.91 E-value: 4.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 506 TSIPSTPKRQSTPKPPRVKPAPEPETRPSAQSTKAPPHKTKKP--GRRRPKTTRSPEVPKSKPALEPATVPPEilvptiV 583
Cdd:NF040712 200 ATVPRLAREPADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLasARRRRAGVEQPEDEPVGPGAAPAAEPDE------A 273
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 564376561 584 PKPPQRPKATRRPEAPQIQPAHEPVTFGSEAPALAIVTTTDiapvisrtkasvtTLAPKSSRPRTRQRPKyKATPS 659
Cdd:NF040712 274 TRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPA-------------RPEPPPAPKPKRRRRR-ASVPS 335
|
|
| SOBP |
pfam15279 |
Sine oculis-binding protein; SOBP is associated with syndromic and nonsyndromic intellectual ... |
491-755 |
4.21e-03 |
|
Sine oculis-binding protein; SOBP is associated with syndromic and nonsyndromic intellectual disability. It carries a zinc-finger of the zf-C2H2 type at the N-terminus, and a highly characteriztic C-terminal PhPhPhPhPhPh motif. The deduced 873-amino acid protein contains an N-terminal nuclear localization signal (NLS), followed by 2 FCS-type zinc finger motifs, a proline-rich region (PR1), a putative RNA-binding motif region, and a C-terminal NLS embedded in a second proline-rich motif. SOBP is expressed in various human tissues, including developing mouse brain at embryonic day 14. In postnatal and adult mouse brain SOBP is expressed in all neurons, with intense staining in the limbic system. Highest expression is in layer V cortical neurons, hippocampus, pyriform cortex, dorsomedial nucleus of thalamus, amygdala, and hypothalamus. Postnatal expression of SOBP in the limbic system corresponds to a time of active synaptogenesis. the family is also referred to as Jackson circler, JXC1. In seven affected siblings from a consanguineous Israeli Arab family with mental retardation, anterior maxillary protrusion, and strabismus mutations were found in this protein.
Pssm-ID: 464609 [Multi-domain] Cd Length: 325 Bit Score: 40.95 E-value: 4.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 491 TSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQSTKAPP-HKTKKPGRRRPKTTRSPEVPKSKPALE 569
Cdd:pfam15279 101 ASPSSSPTSSNSSKPLISVASSSKLLAPKPHEPPSLPPPPLPPKKGRRHRPGlHPPLGRPPGSPPMSMTPRGLLGKPQQH 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 570 PATVP-PEILVPTIVPKPPQRPKATRRPEAPQIQPAHEPvtfgseapalaivtttdiapvisrtkasvtTLAPKSSRPRT 648
Cdd:pfam15279 181 PPPSPlPAFMEPSSMPPPFLRPPPSIPQPNSPLSNPMLP------------------------------GIGPPPKPPRN 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 649 RQRPKYKATPSPKIPQTKPAPRQTTSPPPKLKPPHSRRPAkeqvpkgslhttsKPKMPPSPEVVDITSVPKDeqlshkpD 728
Cdd:pfam15279 231 LGPPSNPMHRPPFSPHHPPPPPTPPGPPPGLPPPPPRGFT-------------PPFGPPFPPVNMMPNPPEM-------N 290
|
250 260
....*....|....*....|....*..
gi 564376561 729 PEVSQSETVLPPVTFRVepPKTTIVPL 755
Cdd:pfam15279 291 FGLPSLAPLVPPVTVLV--PYPVIIPL 315
|
|
| FimV |
COG3170 |
Type IV pilus assembly protein FimV [Cell motility, Extracellular structures]; |
461-691 |
5.42e-03 |
|
Type IV pilus assembly protein FimV [Cell motility, Extracellular structures];
Pssm-ID: 442403 [Multi-domain] Cd Length: 508 Bit Score: 40.93 E-value: 5.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 461 PPKTSRTAEQPRATLAPSEASfdPRTVeifTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQSTKA 540
Cdd:COG3170 106 PPAYAAAAAAPAAAPAPAPAA--PAAA---AAAADQPAAEAAPAASGEYYPVRPGDTLWSIAARPVRPSSGVSLDQMMVA 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 541 P----PHKTKKPGRRRPKTTRSPEVPKSK--PALEPATVPPEILVPTIVPKPPQRPKATRRPEAPQIQPAHEPVTFGSEA 614
Cdd:COG3170 181 LyranPDAFIDGNINRLKAGAVLRVPAAEevAALSPAEARQEVQAQSADWAAYRARLAAAVEPAPAAAAPAAPPAAAAAA 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 615 PALAIVTTTDIAPVISRT-------------KASVTTLAPKSSRPRTRQRPKYKATPSPKIPQTKPAPRQTTSPPPKLKP 681
Cdd:COG3170 261 GPVPAAAEDTLSPEVTAAaaaeeadalpeaaAELAERLAALEAQLAELQRLLALKNPAPAAAVSAPAAAAAAATVEAAAP 340
|
250
....*....|
gi 564376561 682 PHSRRPAKEQ 691
Cdd:COG3170 341 AAAAQPAAAA 350
|
|
| PRK13042 |
PRK13042 |
superantigen-like protein SSL4; Reviewed; |
618-694 |
6.57e-03 |
|
superantigen-like protein SSL4; Reviewed;
Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 40.00 E-value: 6.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 618 AIVTTTDIAPviSRTKASVTTLAPKSSRPRTR-----QRPKYKATPSPKIPQTKPAPRQTTSPPPKLKPPHSrrPAKEQV 692
Cdd:PRK13042 20 VITTTTQAAN--ATTPSSTKVEAPQSTPPSTKveapqSKPNATTPPSTKVEAPQQTPNATTPSSTKVETPQS--PTTKQV 95
|
..
gi 564376561 693 PK 694
Cdd:PRK13042 96 PT 97
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
532-681 |
6.61e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 40.85 E-value: 6.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 532 RPSAQSTKAPPHKTKKPGRrrPKTTRSPEVPKSKPALEPATVPPeilVPTIVPKPPQRPkaTRRPEAPQIQPAHEPVTfg 611
Cdd:PRK14951 365 KPAAAAEAAAPAEKKTPAR--PEAAAPAAAPVAQAAAAPAPAAA---PAAAASAPAAPP--AAAPPAPVAAPAAAAPA-- 435
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 612 seAPALAIVTTTDIAPVisrtkasvttlAPKSSRPRTRQRPKyKATPSPKIPQTKPAPrQTTSPPPKLKP 681
Cdd:PRK14951 436 --AAPAAAPAAVALAPA-----------PPAQAAPETVAIPV-RVAPEPAVASAAPAP-AAAPAAARLTP 490
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
467-612 |
6.65e-03 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 40.14 E-value: 6.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 467 TAEQPRATLAP----SEASFDPRTVEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETR-----PSAQS 537
Cdd:NF040712 191 DFGRPLRPLATvprlAREPADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVgpgaaPAAEP 270
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 564376561 538 TKAPPHKTKKPGRRRPKTTRSPEVPKSKPALEPATVPPEILVPTIVPKPPQRPKATRRPEAPqiQPAHEPVTFGS 612
Cdd:NF040712 271 DEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKPKRRRRRAS--VPSWDDVLLGV 343
|
|
| COG3979 |
COG3979 |
Chitodextrinase [Carbohydrate transport and metabolism]; |
1020-1114 |
7.40e-03 |
|
Chitodextrinase [Carbohydrate transport and metabolism];
Pssm-ID: 443178 [Multi-domain] Cd Length: 369 Bit Score: 40.14 E-value: 7.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 1020 PTNLTVVTVEgcPSFVILDWEK-PLNDTVTEYEVisrengsFSGKNKSIQITNQTFSTVENLKPDTSYEFQVKPKnplge 1098
Cdd:COG3979 6 PTGLTASNVT--SSSVSLSWDAsTDNVGVTGYDV-------YRGGDQVATVTGLTAWTVTGLTPGTEYTFTVGAC----- 71
|
90
....*....|....*.
gi 564376561 1099 GPASNTVAFSTESADP 1114
Cdd:COG3979 72 DAAGNVSAASGTSTAM 87
|
|
| Pneumo_att_G |
pfam05539 |
Pneumovirinae attachment membrane glycoprotein G; |
515-712 |
8.19e-03 |
|
Pneumovirinae attachment membrane glycoprotein G;
Pssm-ID: 114270 [Multi-domain] Cd Length: 408 Bit Score: 40.03 E-value: 8.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 515 QSTPKPPRVKPAPEPETRPSAQSTKAPPHKTkkpgrrrpkTTRSPEVPKSKPALEPATVPPEILVPTIVPKPPQRPKATR 594
Cdd:pfam05539 176 KTTSWPTEVSHPTYPSQVTPQSQPATQGHQT---------ATANQRLSSTEPVGTQGTTTSSNPEPQTEPPPSQRGPSGS 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 595 rPEAPQIQPAHEPVTFGSeapalaivtttdiapviSRTKASVTTLAPKSSRPRTrqrPKYKATPSPKIPQT---KPAPRQ 671
Cdd:pfam05539 247 -PQHPPSTTSQDQSTTGD-----------------GQEHTQRRKTPPATSNRRS---PHSTATPPPTTKRQetgRPTPRP 305
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 564376561 672 TTSPPPKLKPPHSRRPAKEQVPKGSLHTTSKPKMPPSPEVV 712
Cdd:pfam05539 306 TATTQSGSSPPHSSPPGVQANPTTQNLVDCKELDPPKPNSI 346
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
361-541 |
9.13e-03 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 40.41 E-value: 9.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 361 TPETAQSVLIPESElllsslAPKGSPEFPEAKTAFPSEkpggslASSEEPWVVPGAKTSEDSRVVQPRTATyDVVSSSAT 440
Cdd:PRK10811 849 RPQDVQVEEQREAE------EVQVQPVVAEVPVAAAVE------PVVSAPVVEAVAEVVEEPVVVAEPQPE-EVVVVETT 915
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564376561 441 SDETEVEPHTATSDPILDSVPPKTSRTAEQPRATLAPseasfDPRTVEIFTSPEVRPT-TAAPQQTTSIPSTPK---RQS 516
Cdd:PRK10811 916 HPEVIAAPVTEQPQVITESDVAVAQEVAEHAEPVVEP-----QDETADIEEAAETAEVvVAEPEVVAQPAAPVVaevAAE 990
|
170 180 190
....*....|....*....|....*....|....
gi 564376561 517 TPKPPRVKPAPEPETRP---------SAQSTKAP 541
Cdd:PRK10811 991 VETVTAVEPEVAPAQVPeatvehnhaTAPMTRAP 1024
|
|
| |
