|
Name |
Accession |
Description |
Interval |
E-value |
| CCCAP |
pfam15964 |
Centrosomal colon cancer autoantigen protein family; CCCAP is a family of proteins found in ... |
6-666 |
0e+00 |
|
Centrosomal colon cancer autoantigen protein family; CCCAP is a family of proteins found in eukaryotes. CCCAP is also known as SDCCAG8, serologically defined colon cancer antigen 8. It is associated with the centrosome.
Pssm-ID: 435040 [Multi-domain] Cd Length: 703 Bit Score: 884.25 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 6 GNSTLEDSLGQYQRSLRERANRSIHQLKCALREVDATIEEDALDPSTSINVENVDTGVAWHELQHSHAVNQLKALLRQQT 85
Cdd:pfam15964 1 GNSTLEESLGQYQRSLRERANRSIHQLKCALHESDSTISEDEQEESLSSVVQNEDSGSPWSELQHSHAVNQLKALLQQQT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 86 STENETSPRRRKLSPSRPSDCEDGSLPTMHNLVPIINDQSQYIHHLEAEVKFCKDELSSMKNRVQVVVLENERLQQELKS 165
Cdd:pfam15964 81 KKENELSPRRRKLSPSRTSEDESSSLPTVHDLVPIINDQSQYIHHLEAEVKFCKEELSEMKQRVQVVVLENEKLQQELKS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 166 QRQEETLREQTLLDMSGNVQNSWMkTREDSRVIETTKRPFSHGDAETGKAASTGDADKWRLELERLKLTYEAKTDLLESQ 245
Cdd:pfam15964 161 QTQEETLREQTLLDSSGNMQNSWC-TPEDSRVHQTSKRPASHNLAERLKSATTGEDEKWRLELEKLKLLYEAKTEVLESQ 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 246 LKLLRKDLVEYQKTCEDLKERLKHKESLVTASASSRVGGLCLKCAQHEAVLSQTHNNVHIQTIETLTKERDDLMSVLVSV 325
Cdd:pfam15964 240 VKSLRKDLAESQKTCEDLKERLKHKESLVAASTSSRVGGLCLKCAQHEAVLAQTHTNVHMQTIERLTKERDDLMSALVSV 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 326 RSSLAEAQERETSAYKQVKHAVQMTEEANFEKTKALIQCEQLRSELERQTDRLEKELASQQEKRALEKEMIKKEVTRERE 405
Cdd:pfam15964 320 RSSLAEAQQRESSAYEQVKQAVQMTEEANFEKTKALIQCEQLKSELERQKERLEKELASQQEKRAQEKEALRKEMKKERE 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 406 EAEAKMLILSQNIAKLEAEIEKITREKTSAVSQLEEVQNQLASQEMDVTKVCGEMRFQLNKTKMEKDEAEKEHKEYKAKS 485
Cdd:pfam15964 400 ELGATMLALSQNVAQLEAQVEKVTREKNSLVSQLEEAQKQLASQEMDVTKVCGEMRYQLNQTKMKKDEAEKEHREYRTKT 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 486 QKDLEMKDQEIEKLRLELSESTQQVEQEQQKAARARQECLQVTELLGESERQLHLTRLEKDSIQQSFSNEAKAQALQALQ 565
Cdd:pfam15964 480 GRQLEIKDQEIEKLGLELSESKQRLEQAQQDAARAREECLKLTELLGESEHQLHLTRLEKESIQQSFSNEAKAQALQAQQ 559
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 566 REQELTQKIQQMETQHDKTDSEQYLLLTSQNTFLTKLKEECCILAKKLEKVSLKSRSEIVQLSQEKRYLCDKLEKLQKRN 645
Cdd:pfam15964 560 REQELTQKMQQMEAQHDKTVNEQYSLLTSQNTFIAKLKEECCTLAKKLEEITQKSRSEVEQLSQEKEYLQDRLEKLQKRN 639
|
650 660
....*....|....*....|.
gi 672074944 646 DELEDQCVQHGRVHETMKERI 666
Cdd:pfam15964 640 EELEEQCVQHGRMHERMKQRL 660
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
367-651 |
4.31e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 69.58 E-value: 4.31e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 367 LRSELERQTDRLEKE-------LASQQEKRALEKEMI----------KKEVTREREEAEAKMLILSQNIAKLEAEIEKIT 429
Cdd:COG1196 194 ILGELERQLEPLERQaekaeryRELKEELKELEAELLllklreleaeLEELEAELEELEAELEELEAELAELEAELEELR 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 430 REKTSAVSQLEEVQNQLASQEMDVTKVCGEMRFQLNKTKMEKDEAEKEHKEyKAKSQKDLEMKDQEIEKLRLELSESTQQ 509
Cdd:COG1196 274 LELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEE-LAELEEELEELEEELEELEEELEEAEEE 352
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 510 VEQEQQKAARARQECLQVTELLGESERQLhltrlekdsiqqsfsNEAKAQALQALQREQELTQKIQQMETQHDKTDSEQY 589
Cdd:COG1196 353 LEEAEAELAEAEEALLEAEAELAEAEEEL---------------EELAEELLEALRAAAELAAQLEELEEAEEALLERLE 417
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 672074944 590 LLLTSQNTFLTKLKEEcCILAKKLEKVSLKSRSEIVQLSQEKRYLCDKLEKLQKRNDELEDQ 651
Cdd:COG1196 418 RLEEELEELEEALAEL-EEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAA 478
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
228-569 |
2.33e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 67.27 E-value: 2.33e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 228 LERLK-LTYEaktdlLESQLKLLRKD---LVEYQKtcedLKERLKHKESLVTASAssrvgglcLKCAQHEAVLSQTHNNV 303
Cdd:COG1196 188 LERLEdILGE-----LERQLEPLERQaekAERYRE----LKEELKELEAELLLLK--------LRELEAELEELEAELEE 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 304 HIQTIETLTKERDDLMSVLVSVRSSLAEAQERETSAykQVKHAVQMTEEANFEKTKALIQceQLRSELERQTDRLEKELA 383
Cdd:COG1196 251 LEAELEELEAELAELEAELEELRLELEELELELEEA--QAEEYELLAELARLEQDIARLE--ERRRELEERLEELEEELA 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 384 SQQEKRALEKEMIkKEVTREREEAEAKMLILSQNIAKLEAEIEKITREKTSAVSQLEEVQNQLASQEMDvtkvcgemRFQ 463
Cdd:COG1196 327 ELEEELEELEEEL-EELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRA--------AAE 397
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 464 LNKTKMEKDEAEKEHKEYKAKSQKDLEMKDQEIEKLRLELSESTQQVEQEQQKAARARQECLQVTELLGESERQLHLTRL 543
Cdd:COG1196 398 LAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEA 477
|
330 340
....*....|....*....|....*.
gi 672074944 544 EKDSIQQSFSNEAKAQALQALQREQE 569
Cdd:COG1196 478 ALAELLEELAEAAARLLLLLEAEADY 503
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
400-649 |
2.50e-10 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 63.92 E-value: 2.50e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 400 VTREREEAEAKMLILSQNIAKLEAEIEKIT---REKTSAVSQLEEVQNQLASQEMDVTKVCGEMRFQLNKTKMEKDEAEK 476
Cdd:TIGR02168 661 ITGGSAKTNSSILERRREIEELEEKIEELEekiAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEA 740
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 477 EHKEYK----------AKSQKDLEMKDQEIEKLRLELSESTQQVEQEQQKAARARQECLQVTELLGESERQLHLTRLE-- 544
Cdd:TIGR02168 741 EVEQLEeriaqlskelTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEaa 820
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 545 -KDSIQQSFSNEAKAQALQALQREQELTQKIQQMETQHDKTDSEQYLL--LTSQNTFLTKLKEECCILAKKLEKVSLKSR 621
Cdd:TIGR02168 821 nLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIeeLESELEALLNERASLEEALALLRSELEELS 900
|
250 260
....*....|....*....|....*...
gi 672074944 622 SEIVQLSQEKRYLCDKLEKLQKRNDELE 649
Cdd:TIGR02168 901 EELRELESKRSELRRELEELREKLAQLE 928
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
356-651 |
2.78e-10 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 63.93 E-value: 2.78e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 356 EKTKALIQCEQLRSELERQTDRLEK--ELASQQEKRALEKEMIKKEVTRE-REEAEAKMLILSQNIAKLEAEIEKITREK 432
Cdd:TIGR02169 231 EKEALERQKEAIERQLASLEEELEKltEEISELEKRLEEIEQLLEELNKKiKDLGEEEQLRVKEKIGELEAEIASLERSI 310
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 433 TSAVSQLEEVQNQLASQEMdvtkvcgemrfQLNKTKMEKDEAEKEHKEYKAKSQKDLEmkdqEIEKLRLELSESTQQVEQ 512
Cdd:TIGR02169 311 AEKERELEDAEERLAKLEA-----------EIDKLLAEIEELEREIEEERKRRDKLTE----EYAELKEELEDLRAELEE 375
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 513 EQQKAARARQECLQVTELLGESERQLHLTRLEKDSIQQsfsneakaQALQALQREQELTQKIQQMETQHDKTDSEqyllL 592
Cdd:TIGR02169 376 VDKEFAETRDELKDYREKLEKLKREINELKRELDRLQE--------ELQRLSEELADLNAAIAGIEAKINELEEE----K 443
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 672074944 593 TSQNTFLTKLKEECCILAKKLEKVslksRSEIVQLSQEKRYLCDKLEKLQKRNDELEDQ 651
Cdd:TIGR02169 444 EDKALEIKKQEWKLEQLAADLSKY----EQELYDLKEEYDRVEKELSKLQRELAEAEAQ 498
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
308-580 |
1.20e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 61.61 E-value: 1.20e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 308 IETLTKERDDLMSVLVSVRSSLAEAQERETSAYKQVKHAVQMTEEANFEKTKALIQCEQLRSELERQTDRLEkelasQQE 387
Cdd:TIGR02168 679 IEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIA-----QLS 753
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 388 KRALEKEMIKKEVTREREEAEAKMLILSQNIAKLEAEIEKITREKTSAVSQLEEVQNQLASQEMDVTKV---CGEMRFQL 464
Cdd:TIGR02168 754 KELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLrerLESLERRI 833
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 465 NKTKMEKDEAEKEHKEYK-----------------AKSQKDLEMKDQE-------IEKLRLELSESTQQVEQEQQKAARA 520
Cdd:TIGR02168 834 AATERRLEDLEEQIEELSedieslaaeieeleeliEELESELEALLNErasleeaLALLRSELEELSEELRELESKRSEL 913
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 521 RQECLQVTELLGESERQLHLTRLEKDSIQQSFSNEAKAQALQALQREQELTQKIQQMETQ 580
Cdd:TIGR02168 914 RRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKIEDDEEEARRR 973
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
329-588 |
1.35e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 61.49 E-value: 1.35e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 329 LAEAQERETSAYKQVKHAVQMTEEANFEKTKALIQCEQLRSELERQTDRLEkelASQQEKRALEKEMIKKEVTREREEAE 408
Cdd:COG1196 234 LRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELE---EAQAEEYELLAELARLEQDIARLEER 310
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 409 AKMLilSQNIAKLEAEIEKITREKTSAVSQLEEVQNQLASQEMDVTkvcgEMRFQLNKTKMEKDEAEKEHKEYKAKSQKD 488
Cdd:COG1196 311 RREL--EERLEELEEELAELEEELEELEEELEELEEELEEAEEELE----EAEAELAEAEEALLEAEAELAEAEEELEEL 384
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 489 LEMKDQEIEKLRLELSESTQQVEQEQQKA---ARARQECLQVTELLGESERQLHLTRLEKDSIQQSfSNEAKAQALQALQ 565
Cdd:COG1196 385 AEELLEALRAAAELAAQLEELEEAEEALLerlERLEEELEELEEALAELEEEEEEEEEALEEAAEE-EAELEEEEEALLE 463
|
250 260
....*....|....*....|...
gi 672074944 566 REQELTQKIQQMETQHDKTDSEQ 588
Cdd:COG1196 464 LLAELLEEAALLEAALAELLEEL 486
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
325-587 |
1.86e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 61.23 E-value: 1.86e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 325 VRSSLAEAQERETSAYKQVKHAVQMTEEANFEKTKA---LIQCEQLRSELERQTDRLEKELASQQEKRALEKEMIKkEVT 401
Cdd:TIGR02168 682 LEEKIEELEEKIAELEKALAELRKELEELEEELEQLrkeLEELSRQISALRKDLARLEAEVEQLEERIAQLSKELT-ELE 760
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 402 REREEAEAKMLILSQNIAKLEAEIEKITREKTSAVSQLEEVQNQLASQEMDVTkvcgemrfQLNKTKMEKDEAEKEHKEY 481
Cdd:TIGR02168 761 AEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELT--------LLNEEAANLRERLESLERR 832
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 482 KAKSQKDLEMKDQEIEKLRLELSESTQQVEQEQQKAARARQECLQVTELLGESERQLHLTRLEKDSIQQSFsNEAKAQAL 561
Cdd:TIGR02168 833 IAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEEL-RELESKRS 911
|
250 260
....*....|....*....|....*.
gi 672074944 562 QALQREQELTQKIQQMETQHDKTDSE 587
Cdd:TIGR02168 912 ELRRELEELREKLAQLELRLEGLEVR 937
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
227-518 |
6.21e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 59.30 E-value: 6.21e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 227 ELERLKLTYEAKTDLLESQLKLLRKDLVEYQKTCEDLKERLKHKESLVTASASSRVgglclkcaqheavlsqthnnVHIQ 306
Cdd:TIGR02168 681 ELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLA--------------------RLEA 740
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 307 TIETLTKERDDLMSVLVSVRSSLAEAQERETSAYKQVKHAVQMTEEANFEKTKALIQCEQLRS---ELERQTDRLEKELA 383
Cdd:TIGR02168 741 EVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREaldELRAELTLLNEEAA 820
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 384 SQQEKRA-LEKEMIKKEVTREREEAEAKmlILSQNIAKLEAEIEKITREKTSAVSQLEEVQNQLASQEmdvtkvcgEMRF 462
Cdd:TIGR02168 821 NLRERLEsLERRIAATERRLEDLEEQIE--ELSEDIESLAAEIEELEELIEELESELEALLNERASLE--------EALA 890
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 672074944 463 QLNKTKMEKDEAEKEHKEYKAKSQKDLEMKDQEIEKLRLELSESTQQVEQEQQKAA 518
Cdd:TIGR02168 891 LLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLS 946
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
369-650 |
1.48e-07 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 55.07 E-value: 1.48e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 369 SELERQTDRLEKELASQQEKRALEKEMIKKEVT---REREEAEAKMLILSQNIAKLEAEIEKITREKTSAVSQLEEVQNQ 445
Cdd:TIGR02169 194 DEKRQQLERLRREREKAERYQALLKEKREYEGYellKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQL 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 446 LASQEMDVTKVCGEMRFQLnKTKMEKDEAEKEHKEYK-AKSQKDLEMKDQEIEKLRLELSESTQQVEQEQQKAARARQEC 524
Cdd:TIGR02169 274 LEELNKKIKDLGEEEQLRV-KEKIGELEAEIASLERSiAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRR 352
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 525 LQVTELLGESERQLHLTRLEKDSIQQSFSnEAKAQALQALQREQELTQKIQQMETQHDKTDSEQYLL----------LTS 594
Cdd:TIGR02169 353 DKLTEEYAELKEELEDLRAELEEVDKEFA-ETRDELKDYREKLEKLKREINELKRELDRLQEELQRLseeladlnaaIAG 431
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 672074944 595 QNTFLTKLKEECCILAKKLEKVSLKSRSEIVQLSQEKRYLCDKLEKLQKRNDELED 650
Cdd:TIGR02169 432 IEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSK 487
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
366-580 |
1.59e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 54.00 E-value: 1.59e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 366 QLRSELERQTDRLEKELASQQEKRALEKEMiKKEVTREREEAEAKMLILSQNIAKLEAEIEKITREKTSAVSQLEEVQNQ 445
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKE-EKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 446 LASQEMDVTKVCGEMrFQLNKTKMEKDEAEKEHKEYKAKSQKDLEMKDQEIEKLRLELSESTQQVEQEQQKAARARQECL 525
Cdd:COG4942 99 LEAQKEELAELLRAL-YRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELE 177
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 672074944 526 QVTELLGESERQLHLTRLEKDSIQQSFSNEAKA--QALQALQR-EQELTQKIQQMETQ 580
Cdd:COG4942 178 ALLAELEEERAALEALKAERQKLLARLEKELAElaAELAELQQeAEELEALIARLEAE 235
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
308-568 |
2.33e-07 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 54.29 E-value: 2.33e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 308 IETLTKERDDLMSVLVSVRSSLAEAQERETSAYKQVKHAVQMTEEANFEKTKALIQCEQL---RSELERQTDRLEKELAS 384
Cdd:TIGR02168 262 LQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELeaqLEELESKLDELAEELAE 341
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 385 QQEKraleKEMIKKEVTRERE---EAEAKMLILSQNIAKLEAEIEKITREKTSAVSQLEEVQNQLASQEMDVTKVCGEmr 461
Cdd:TIGR02168 342 LEEK----LEELKEELESLEAeleELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDR-- 415
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 462 fqLNKTKMEKDEAEKEHKEY-KAKSQKDLEMKDQEIEKLRLELSESTQQVEQEQQKAARARQECLQVTELLGESERQLHL 540
Cdd:TIGR02168 416 --RERLQQEIEELLKKLEEAeLKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDS 493
|
250 260
....*....|....*....|....*...
gi 672074944 541 TRlekdSIQQSFSNEAKAQALQALQREQ 568
Cdd:TIGR02168 494 LE----RLQENLEGFSEGVKALLKNQSG 517
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
294-550 |
3.30e-06 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 50.61 E-value: 3.30e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 294 AVLSQTHNNVHIQTIETLTKERddlmsvLVSVRSSLAEAQERETSAYKQVKhavQMTEEANFEKTKALIQCEQLRSELER 373
Cdd:pfam12128 256 AELRLSHLHFGYKSDETLIASR------QEERQETSAELNQLLRTLDDQWK---EKRDELNGELSAADAAVAKDRSELEA 326
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 374 QTDRLEKELASQQEKRALEKEMIKkEVTREREEAEAKMLILSQNIAKLEAEIE------------KITREKTSAVSQLEE 441
Cdd:pfam12128 327 LEDQHGAFLDADIETAAADQEQLP-SWQSELENLEERLKALTGKHQDVTAKYNrrrskikeqnnrDIAGIKDKLAKIREA 405
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 442 VQNQLASQEMDVTKVCGEMRFQLNKTKMEKDEAEKEHKE-------------YKAKSQKDLEMKDQEIEKLRLELSESTQ 508
Cdd:pfam12128 406 RDRQLAVAEDDLQALESELREQLEAGKLEFNEEEYRLKSrlgelklrlnqatATPELLLQLENFDERIERAREEQEAANA 485
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 672074944 509 QVEQEQQKAARARQECLQVTELLGESERQLHLTRLEKDSIQQ 550
Cdd:pfam12128 486 EVERLQSELRQARKRRDQASEALRQASRRLEERQSALDELEL 527
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
365-574 |
4.90e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 46.55 E-value: 4.90e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 365 EQLRSELERQTDRLEKELASQQEK-RALEKEMikkEVTRERE---EAEAKMLILSQNIAKLEAEIEKITREKTSAVSQLE 440
Cdd:COG3206 167 ELRREEARKALEFLEEQLPELRKElEEAEAAL---EEFRQKNglvDLSEEAKLLLQQLSELESQLAEARAELAEAEARLA 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 441 EVQNQLASQEMDVTKVCGEMRFQLNKTKMEKDEAEkehkeyKAKSQKDLEMKDQEIEKLRLELSESTQQVEQEQQKAARA 520
Cdd:COG3206 244 ALRAQLGSGPDALPELLQSPVIQQLRAQLAELEAE------LAELSARYTPNHPDVIALRAQIAALRAQLQQEAQRILAS 317
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 672074944 521 RQeclqvTELLGESERQLHLTRLEKDSIQQSFSNEAKAQALQALQREQELTQKI 574
Cdd:COG3206 318 LE-----AELEALQAREASLQAQLAQLEARLAELPELEAELRRLEREVEVAREL 366
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
124-490 |
4.93e-05 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 46.59 E-value: 4.93e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 124 QSQYIHHLEAEVKFCKDELSSMKNRVQVVVLENERLQQELKSQRQEETLREQTLLDMSGNVQNSWMKTREDSRVIETTKR 203
Cdd:TIGR02168 675 RRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSK 754
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 204 PFSHGDAE-TGKAASTGDADKWRLELERLKLTYEAKTDLLESQLKLLRKDLVEYQKTCEDLKERLkhkeslvtASASSRV 282
Cdd:TIGR02168 755 ELTELEAEiEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEA--------ANLRERL 826
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 283 GGLclkcaQHEAVLSQTHNNVHIQTIETLTKERDDLMSVLVSVRSSLAEAQERETSAYKQVKHAVQMTEEANFEKTKA-- 360
Cdd:TIGR02168 827 ESL-----ERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELse 901
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 361 -LIQCEQLRSELERQTDRLEKELASQQEKRALEKEMIKKEVTREREEAEAKMLILSQNIAKLEAEIEKITREKTSAVSQL 439
Cdd:TIGR02168 902 eLRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKIEDDEEEARRRLKRLENKI 981
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 672074944 440 EEVQNqlasqemdvtkvcgemrfqLNKTKMEKDEAEKEHKEYKAKSQKDLE 490
Cdd:TIGR02168 982 KELGP-------------------VNLAAIEEYEELKERYDFLTAQKEDLT 1013
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
363-588 |
5.10e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 46.83 E-value: 5.10e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 363 QCEQLRsELERQTDRLEKELASQQEKRALEKEMIKKEVTREREEAEAKMLILSQNIAKLEAEIEKITREKTSAVSQLEEV 442
Cdd:COG4913 250 QIELLE-PIRELAERYAAARERLAELEYLRAALRLWFAQRRLELLEAELEELRAELARLEAELERLEARLDALREELDEL 328
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 443 QNQLASQEMDvtkvcgemrfQLNKTKMEKDEAEKEHKEYKAKSQKDlemkDQEIEKLRLELSESTQQVEQEQQKAARARQ 522
Cdd:COG4913 329 EAQIRGNGGD----------RLEQLEREIERLERELEERERRRARL----EALLAALGLPLPASAEEFAALRAEAAALLE 394
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 672074944 523 eclQVTELLGESERQLHltrlekdsiqqsfsnEAKAQALQALQREQELTQKIQQMETQHDKTDSEQ 588
Cdd:COG4913 395 ---ALEEELEALEEALA---------------EAEAALRDLRRELRELEAEIASLERRKSNIPARL 442
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
403-651 |
7.82e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.53 E-value: 7.82e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 403 EREEAEAKMLILSQNIAKLEAEIEKITREKTSAVSQLEEVQNQLASQEMDVtkvcgemrfqlnktkmekdeaekehkeyk 482
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRI----------------------------- 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 483 AKSQKDLEMKDQEIEKLRLELSEstQQVEQEQQKAARARQecLQVTELLGESERQLHLtrLEKDSIQQSFSNEAKAQALQ 562
Cdd:COG4942 72 RALEQELAALEAELAELEKEIAE--LRAELEAQKEELAEL--LRALYRLGRQPPLALL--LSPEDFLDAVRRLQYLKYLA 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 563 ALQREQ--ELTQKIQQMETQHDKTDSEQylllTSQNTFLTKLKEEccilAKKLEKVSLKSRSEIVQLSQEKRYLCDKLEK 640
Cdd:COG4942 146 PARREQaeELRADLAELAALRAELEAER----AELEALLAELEEE----RAALEALKAERQKLLARLEKELAELAAELAE 217
|
250
....*....|.
gi 672074944 641 LQKRNDELEDQ 651
Cdd:COG4942 218 LQQEAEELEAL 228
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
313-663 |
7.83e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 46.29 E-value: 7.83e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 313 KERDDLMSVLVSVRSSLAEAQERETSAYKQVKHAVQMTEEANFEKTKALIQCEQLRSELERQTDRLEKELASQQEKRALE 392
Cdd:PTZ00121 1247 EERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEE 1326
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 393 KEMIKKEVTREREEAEAKmlilsQNIAKLEAEIEKITREKTSAVSQLEEVQNQLASQEMDVTKVCGEMRFQLNKTKMEKD 472
Cdd:PTZ00121 1327 AKKKADAAKKKAEEAKKA-----AEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAE 1401
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 473 EAEKEHKEYKAKS---QKDLEMKDQEIEKLRLELSESTQQVEQEQQKAARARQECLQVTELLGESERQLHLTRLEKDSIQ 549
Cdd:PTZ00121 1402 EDKKKADELKKAAaakKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEE 1481
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 550 QSFSNEAKAQALQALQREQELTQKIQQMETQHDKTDSEQYLLLTSQNTFLTKLKEECCILAKKLEKVSLKSRSEIVQLSQ 629
Cdd:PTZ00121 1482 AKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAE 1561
|
330 340 350
....*....|....*....|....*....|....*...
gi 672074944 630 EKRYLCDKLEKLQKRNDEL----EDQCVQHGRVHETMK 663
Cdd:PTZ00121 1562 EKKKAEEAKKAEEDKNMALrkaeEAKKAEEARIEEVMK 1599
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
356-667 |
1.10e-04 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 45.73 E-value: 1.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 356 EKTKALIQCEQLRSELERQTDRLEKELAS-----QQEKRALEKEMIKK--------------------------EVTRER 404
Cdd:pfam02463 170 KKKEALKKLIEETENLAELIIDLEELKLQelklkEQAKKALEYYQLKEkleleeeyllyldylklneeridllqELLRDE 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 405 EEAEAKMLILSQNIAKLEAEIEKITREKTSAVSQLEEVQNQLASQEmdvtKVCGEMRFQLNKTKMEKDEAEKEHKEYKAK 484
Cdd:pfam02463 250 QEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEE----EELKSELLKLERRKVDDEEKLKESEKEKKK 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 485 SQKDLEMKDQEIEKLRLELSESTQQVEQEQQKAARARQeclqvteLLGESERQLHLTRLEKDSIQQSFSNEAKAQALQAL 564
Cdd:pfam02463 326 AEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEK-------LQEKLEQLEEELLAKKKLESERLSSAAKLKEEELE 398
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 565 QREQEltqkIQQMETQHDKTDSEQYLLLTSQNTFLTKLKEECCILAKKLEKVSLKSRSEIVQLSQEKRylcDKLEKLQKR 644
Cdd:pfam02463 399 LKSEE----EKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLK---DELELKKSE 471
|
330 340
....*....|....*....|...
gi 672074944 645 NDELEDQCVQHGRVHETMKERIL 667
Cdd:pfam02463 472 DLLKETQLVKLQEQLELLLSRQK 494
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
225-588 |
1.34e-04 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 45.49 E-value: 1.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 225 RLELERLKLTYEAKTDLLESQLKLLRKDLVEYQKTCEDLKER---LKHKESLVTASASSRVGGLCLKCAQHEAVLSQTHN 301
Cdd:pfam15921 330 RSELREAKRMYEDKIEELEKQLVLANSELTEARTERDQFSQEsgnLDDQLQKLLADLHKREKELSLEKEQNKRLWDRDTG 409
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 302 NVhiQTIETLTKERDD-------LMSVLVSVRSSLAEAQERETSAYKQVKHAVQMTEE--ANFEKTKALIQ--CEQLRSE 370
Cdd:pfam15921 410 NS--ITIDHLRRELDDrnmevqrLEALLKAMKSECQGQMERQMAAIQGKNESLEKVSSltAQLESTKEMLRkvVEELTAK 487
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 371 ---LERQTDRLEKELASQQEK-RALEKemIKKEVTREREEAEAKMlilsQNIAKLEAEIEKITREKTSA------VSQLE 440
Cdd:pfam15921 488 kmtLESSERTVSDLTASLQEKeRAIEA--TNAEITKLRSRVDLKL----QELQHLKNEGDHLRNVQTECealklqMAEKD 561
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 441 EVQNQLASQEMDVTKVCGEMRFQLNKTKMEKDEAEKEHKEYKAKSQKDLEMKDQEIEKLRlELSESTQQVEQEQQKAARA 520
Cdd:pfam15921 562 KVIEILRQQIENMTQLVGQHGRTAGAMQVEKAQLEKEINDRRLELQEFKILKDKKDAKIR-ELEARVSDLELEKVKLVNA 640
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 672074944 521 RQECLQVTELLGESERQL----HLTRLEKDSIQQSFsnEAKAQALQALQREQELTQKIQQMETQHDKTDSEQ 588
Cdd:pfam15921 641 GSERLRAVKDIKQERDQLlnevKTSRNELNSLSEDY--EVLKRNFRNKSEEMETTTNKLKMQLKSAQSELEQ 710
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
368-583 |
1.67e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 44.94 E-value: 1.67e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 368 RSELERQTDRLEKELASQQEKRALEKEMIKkEVTREREEaeakmliLSQNIAKLEAEIEkitrektSAVSQLEEVQNQLA 447
Cdd:COG3096 280 RRELSERALELRRELFGARRQLAEEQYRLV-EMARELEE-------LSARESDLEQDYQ-------AASDHLNLVQTALR 344
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 448 SQEmdvtKV------CGEMRFQLNKTKMEKDEAEKEHKEYKAKsqkdLEMKDQEIEKLRLELSEsTQQVEQEQQKAARAR 521
Cdd:COG3096 345 QQE----KIeryqedLEELTERLEEQEEVVEEAAEQLAEAEAR----LEAAEEEVDSLKSQLAD-YQQALDVQQTRAIQY 415
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 672074944 522 QECLQVtelLGESERQLHLTRLEKDSIQQSFSnEAKAQALQALQREQELTQKIQQME---TQHDK 583
Cdd:COG3096 416 QQAVQA---LEKARALCGLPDLTPENAEDYLA-AFRAKEQQATEEVLELEQKLSVADaarRQFEK 476
|
|
| Golgin_A5 |
pfam09787 |
Golgin subfamily A member 5; Members of this family of proteins are involved in maintaining ... |
399-549 |
1.80e-04 |
|
Golgin subfamily A member 5; Members of this family of proteins are involved in maintaining Golgi structure. They stimulate the formation of Golgi stacks and ribbons, and are involved in intra-Golgi retrograde transport. Two main interactions have been characterized: one with RAB1A that has been activated by GTP-binding and another with isoform CASP of CUTL1.
Pssm-ID: 462900 [Multi-domain] Cd Length: 305 Bit Score: 43.98 E-value: 1.80e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 399 EVTREREEAEAKMLILSQNIAKLEAEIEKITREKTSAVSQLEEVQNQLASQEMDVTKVCGEMRFQLNKTKMEKDEAEKEH 478
Cdd:pfam09787 51 ELRQERDLLREEIQKLRGQIQQLRTELQELEAQQQEEAESSREQLQELEEQLATERSARREAEAELERLQEELRYLEEEL 130
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 672074944 479 KEYKAKSQKDLEMKDQEIEKLRLELSESTQQVEQEQQKAARARqeclQVTELLGESERQLHLTRLEKDSIQ 549
Cdd:pfam09787 131 RRSKATLQSRIKDREAEIEKLRNQLTSKSQSSSSQSELENRLH----QLTETLIQKQTMLEALSTEKNSLV 197
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
322-480 |
1.94e-04 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 44.38 E-value: 1.94e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 322 LVSVRSSLAEAQERETSAYKQVKHAvqmTEEANFEKTKALIQC----EQLRSELERQTDRLEKELAsQQEKRALEKEMI- 396
Cdd:PRK12704 23 FVRKKIAEAKIKEAEEEAKRILEEA---KKEAEAIKKEALLEAkeeiHKLRNEFEKELRERRNELQ-KLEKRLLQKEENl 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 397 ---KKEVTREREEAEAKMLILSQNIAKLEAEIEKITREKTSAVSQLEEVQNQLASQ--EMDVTKVCGEMRFQ----LNKT 467
Cdd:PRK12704 99 drkLELLEKREEELEKKEKELEQKQQELEKKEEELEELIEEQLQELERISGLTAEEakEILLEKVEEEARHEaavlIKEI 178
|
170
....*....|....
gi 672074944 468 KME-KDEAEKEHKE 480
Cdd:PRK12704 179 EEEaKEEADKKAKE 192
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
329-584 |
3.02e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 44.36 E-value: 3.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 329 LAEAQE-RETSAYKQVKHAVQMTEEANFEKTKALI--QCEQLRSELERQTDRLEKELASQQEKRAlEKEMIKKEVTRERE 405
Cdd:PTZ00121 1551 LKKAEElKKAEEKKKAEEAKKAEEDKNMALRKAEEakKAEEARIEEVMKLYEEEKKMKAEEAKKA-EEAKIKAEELKKAE 1629
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 406 EAEAKMLILSQNIAKLEAEIEKITREKTSAVSQLEevqnQLASQEMDVTKVCGEMRfqlnktkmeKDEAEKEHKEYKAKS 485
Cdd:PTZ00121 1630 EEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAA----EEAKKAEEDKKKAEEAK---------KAEEDEKKAAEALKK 1696
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 486 QKDLEMKDQEIEKLRLELSESTQQVEQEQQKAARARQECLQVTELLGESERQLHLTRLEKDSIQQSFSNEAKAQALQALQ 565
Cdd:PTZ00121 1697 EAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKE 1776
|
250 260
....*....|....*....|...
gi 672074944 566 R----EQELTQKIQQMETQHDKT 584
Cdd:PTZ00121 1777 KeaviEEELDEEDEKRRMEVDKK 1799
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
228-454 |
7.17e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 42.70 E-value: 7.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 228 LERLKLTYEAKTDLLESQLKLLRKDLVEYQKTCEDLKErlkhkeslvtasassrvgglclkcaQHEAVLSQTHNNVHIQT 307
Cdd:COG3206 166 LELRREEARKALEFLEEQLPELRKELEEAEAALEEFRQ-------------------------KNGLVDLSEEAKLLLQQ 220
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 308 IETLTKErddlmsvLVSVRSSLAEAQERETSAYKQVKHAVQMTEEANfeKTKALIQCEQLRSELERQTDRLEK------- 380
Cdd:COG3206 221 LSELESQ-------LAEARAELAEAEARLAALRAQLGSGPDALPELL--QSPVIQQLRAQLAELEAELAELSArytpnhp 291
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 672074944 381 ELASQQEKRALEKEMIKKEVTREREEAEAKMLILSQNIAKLEAEIEKITREktsaVSQLEEVQNQLASQEMDVT 454
Cdd:COG3206 292 DVIALRAQIAALRAQLQQEAQRILASLEAELEALQAREASLQAQLAQLEAR----LAELPELEAELRRLEREVE 361
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
225-450 |
8.06e-04 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 42.74 E-value: 8.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 225 RLELERLKLTYEAKTDLLESQLKLLRKDLVEYQKTCEDLKERLKHKE---------------SLVTASASSRVGGLCLKC 289
Cdd:TIGR02168 255 LEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEqqkqilrerlanlerQLEELEAQLEELESKLDE 334
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 290 AQHEAVLSQTHNNVHIQTIETLTKERDDLMSVLVSVRSSLAEAQERETSAYKQVKHAVQMTEEANFEKTKALIQCEQLRS 369
Cdd:TIGR02168 335 LAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLED 414
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 370 ELERQTDRLEKELASQQEKRALEKEMIKKEVTREREEAEAKMLILSQNIAKLEAEIEKITREKTSAVSQLEEVQNQLASQ 449
Cdd:TIGR02168 415 RRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSL 494
|
.
gi 672074944 450 E 450
Cdd:TIGR02168 495 E 495
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
361-545 |
8.12e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 42.45 E-value: 8.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 361 LIQCEQLRSELERQTDRLEKELASQQEKRALEKEMIKKEVTREREEAEAKMLILSQNIAKLEAEIEKITREKTSAVSQLE 440
Cdd:COG4717 70 LKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLYQELEALEAELAELPERLE 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 441 EVQNQLAsqemdvtkvcgEMRFQLNKTKMEKDEAEKEHKEYKAKSQKDLEMKDQEIEKLRLELSESTQQVEQEQQKAARA 520
Cdd:COG4717 150 ELEERLE-----------ELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEA 218
|
170 180
....*....|....*....|....*
gi 672074944 521 RQECLQVTELLGESERQLHLTRLEK 545
Cdd:COG4717 219 QEELEELEEELEQLENELEAAALEE 243
|
|
| PRK00247 |
PRK00247 |
putative inner membrane protein translocase component YidC; Validated |
361-521 |
8.87e-04 |
|
putative inner membrane protein translocase component YidC; Validated
Pssm-ID: 178945 [Multi-domain] Cd Length: 429 Bit Score: 42.15 E-value: 8.87e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 361 LIQCEQLRSELERQTDRLEKELASQQEKRAL--EKEMIKKEVTREREEAEAKMLILSQNIAKLEAEIEKITREKTSAVSQ 438
Cdd:PRK00247 263 LIQNIIMYLILERKYPLTDEFKEHHAEQRAQyrEKQKEKKAFLWTLRRNRLRMIITPWRAPELHAENAEIKKTRTAEKNE 342
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 439 LEEVQNQLASQEMDVTKVCGEMRFQLNKTKMEKDEAEKEHKEYKAKSQKDLEMKDQEIEKLRLELSESTQQVEQEQQKAA 518
Cdd:PRK00247 343 AKARKKEIAQKRRAAEREINREARQERAAAMARARARRAAVKAKKKGLIDASPNEDTPSENEESKGSPPQVEATTTAEPN 422
|
...
gi 672074944 519 RAR 521
Cdd:PRK00247 423 REP 425
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
322-646 |
1.04e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 42.42 E-value: 1.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 322 LVSVRSSLAEAQERETSAYKQVKHAVQMTEEA--NFEKTKALIQCEQLR-SELERQ-TDRLEKELASQQEKRALEK---E 394
Cdd:pfam17380 277 IVQHQKAVSERQQQEKFEKMEQERLRQEKEEKarEVERRRKLEEAEKARqAEMDRQaAIYAEQERMAMERERELERirqE 356
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 395 MIKKEVTREREEAEAKMLILSQNIAKLEAEiekiTREKTSAVSQLEEVQNQLASQEMDVTKVCGEMRFQLNKTKMEKDEA 474
Cdd:pfam17380 357 ERKRELERIRQEEIAMEISRMRELERLQME----RQQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAEQEEA 432
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 475 EKEhkeykaKSQKDLEMKDQEIEKLRLELSESTQQVEQEQQKAARARQECLqvtELLGESERQLHLTRLEKDSIQQSFsn 554
Cdd:pfam17380 433 RQR------EVRRLEEERAREMERVRLEEQERQQQVERLRQQEEERKRKKL---ELEKEKRDRKRAEEQRRKILEKEL-- 501
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 555 EAKAQALQALQREQELTQKiqQMETQHDKTDSEQYLLLTSQNTFLTKLKEECCILAKKLEKVSlKSRSEIVQLSQEKRYL 634
Cdd:pfam17380 502 EERKQAMIEEERKRKLLEK--EMEERQKAIYEEERRREAEEERRKQQEMEERRRIQEQMRKAT-EERSRLEAMEREREMM 578
|
330
....*....|..
gi 672074944 635 CDKLEKLQKRND 646
Cdd:pfam17380 579 RQIVESEKARAE 590
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
306-520 |
1.15e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 41.67 E-value: 1.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 306 QTIETLTKERDDLMSVLVSVRSSLAEAQERETSAYKQVKHAVQMTEEANFEKTKALIQCEQLRSELERQTDRLEKELASQ 385
Cdd:COG4942 34 QEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELAELLRAL 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 386 QEKRALEKEMIK------KEVTREREEAEAKMLILSQNIAKLEAEIEKITREKTSAVSQLEEVQNQLASQEmdvtkvcgE 459
Cdd:COG4942 114 YRLGRQPPLALLlspedfLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAELE--------E 185
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 672074944 460 MRFQLNKTKMEKDEAEKEHKEYKAKSQKDLEMKDQEIEKLRLELSESTQQVEQEQQKAARA 520
Cdd:COG4942 186 ERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAA 246
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
236-431 |
1.24e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.21 E-value: 1.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 236 EAKTDLLESQLKLLRKDLVEYQKTCEDLKERLKHKESLvtASASSRVGGLCLKCAQHEAVLSQthnnvhiqtIETLTKER 315
Cdd:COG4913 609 RAKLAALEAELAELEEELAEAEERLEALEAELDALQER--REALQRLAEYSWDEIDVASAERE---------IAELEAEL 677
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 316 DDL---MSVLVSVRSSLAEAQERETSAYKQVKHAVQMTEEANFEKTKALIQCEQLRSELERQTDRLEKELASQQEKRaLE 392
Cdd:COG4913 678 ERLdasSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEER-FA 756
|
170 180 190
....*....|....*....|....*....|....*....
gi 672074944 393 KEMIKKEVTREREEAEAKMLILSQNIAKLEAEIEKITRE 431
Cdd:COG4913 757 AALGDAVERELRENLEERIDALRARLNRAEEELERAMRA 795
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
227-409 |
1.82e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 41.29 E-value: 1.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 227 ELERLKLTYEAKTDLLESQLKLLRKDLVEYQKTCEDLKERLKhkESLVTASASSRVGGLCLKCAQHEAVLSQTHnnvhIQ 306
Cdd:COG4942 66 ALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELA--ELLRALYRLGRQPPLALLLSPEDFLDAVRR----LQ 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 307 TIETLTKERDDLMSVLVSVRSSLAEAQERETSAYKQVKHAVQMTEEANFEKTKALIQCEQLRSELERQTDRLEKELASQQ 386
Cdd:COG4942 140 YLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQ 219
|
170 180
....*....|....*....|...
gi 672074944 387 EKRALEKEMIKKEVTREREEAEA 409
Cdd:COG4942 220 QEAEELEALIARLEAEAAAAAER 242
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
440-651 |
2.22e-03 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 41.58 E-value: 2.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 440 EEVQNQLASQEMDVTKV---CGEMRFQLNKTKMEKDEAEKeHKEYKAksqkdlEMKDQEIEKLRLELSESTQQVEQEQQK 516
Cdd:TIGR02168 175 KETERKLERTRENLDRLediLNELERQLKSLERQAEKAER-YKELKA------ELRELELALLVLRLEELREELEELQEE 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 517 AARARQECLQVTELLGESERQLHLTRLEKdsiqqsfsNEAKAQALQALQREQELTQKIQQMETQHDKTDSEQYLLLTSQ- 595
Cdd:TIGR02168 248 LKEAEEELEELTAELQELEEKLEELRLEV--------SELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLe 319
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 672074944 596 --NTFLTKLKEECCILAKKLEKVSLKSRS---EIVQLSQEKRYLCDKLEKLQKRNDELEDQ 651
Cdd:TIGR02168 320 elEAQLEELESKLDELAEELAELEEKLEElkeELESLEAELEELEAELEELESRLEELEEQ 380
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
242-513 |
3.09e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 40.82 E-value: 3.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 242 LESQLKLLRKDLVEYQKTCEDLKERLKHKESLVTASASSrvgglcLKCAQHEAVLSQTHNNVHIQTIETLTKERDDLMSV 321
Cdd:TIGR02169 672 EPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQE------LSDASRKIGEIEKEIEQLEQEEEKLKERLEELEED 745
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 322 LVSVRSSLAEAQ------ERETSAYKQVKHAVQMTEEANF---------EKTKALIQCEQLRSELERQTDRLEKELASQQ 386
Cdd:TIGR02169 746 LSSLEQEIENVKselkelEARIEELEEDLHKLEEALNDLEarlshsripEIQAELSKLEEEVSRIEARLREIEQKLNRLT 825
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 387 EKRALEKEmikkevtrEREEAEAKMLILSQNIAKLEAEIEKITREKTSAVSQLEEVQNQLAsqemdvtkvcgEMRFQLNK 466
Cdd:TIGR02169 826 LEKEYLEK--------EIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALR-----------DLESRLGD 886
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 672074944 467 TKMEKDEAEKEHKEYKAKsQKDLEMKDQEIEKLRLELSESTQQVEQE 513
Cdd:TIGR02169 887 LKKERDELEAQLRELERK-IEELEAQIEKKRKRLSELKAKLEALEEE 932
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
492-666 |
3.31e-03 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 40.81 E-value: 3.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 492 KDQEIEKLRLELSESTQQVEQEQQKAARARQECLQVTELLGESERQLHLTRLEKDSIQQSFSN-EAKAQALQAL--QREQ 568
Cdd:TIGR02168 675 RRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARlEAEVEQLEERiaQLSK 754
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 569 ELTQKIQQMETQHDKTDSEQYLL------LTSQNTFLTKLKEECCILAKKLEKVslksRSEIVQLSQEKRYLCDKLEKLQ 642
Cdd:TIGR02168 755 ELTELEAEIEELEERLEEAEEELaeaeaeIEELEAQIEQLKEELKALREALDEL----RAELTLLNEEAANLRERLESLE 830
|
170 180
....*....|....*....|....
gi 672074944 643 KRNDELEDQCVQHGRVHETMKERI 666
Cdd:TIGR02168 831 RRIAATERRLEDLEEQIEELSEDI 854
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
305-559 |
4.65e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 40.51 E-value: 4.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 305 IQTIETLTKERDDLMSVLVSVRSSLAEAQERETSAYKQVKHAVQMTEEANFEKTKALIQCEQLRSELERQTDRLEKELAS 384
Cdd:PTZ00121 1563 KKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKE 1642
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 385 QQEKRALEKEMIKKEVTREREEAEAKMLILSQNIAKLEAEIEKITREKTSAVSQLEEVQ---NQLASQEMDVTKVCGEMR 461
Cdd:PTZ00121 1643 AEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAkkaEELKKKEAEEKKKAEELK 1722
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 462 FQLNKTKMEKDEAEKEHKEYKAKSQkdlEMKDQEIEKLRLElsestQQVEQEQQKAARARQECLQVTELLGESERQLHLT 541
Cdd:PTZ00121 1723 KAEEENKIKAEEAKKEAEEDKKKAE---EAKKDEEEKKKIA-----HLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRM 1794
|
250
....*....|....*...
gi 672074944 542 RLEKdSIQQSFSNEAKAQ 559
Cdd:PTZ00121 1795 EVDK-KIKDIFDNFANII 1811
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
370-516 |
5.05e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 40.00 E-value: 5.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 370 ELERQTDRLEKELASQQEKRALEKEMIkkevtrerEEAEAKMlilSQNIAKLEAEIEKITREKTSAVSQLEEVQNQLASQ 449
Cdd:PHA02562 178 ELNQQIQTLDMKIDHIQQQIKTYNKNI--------EEQRKKN---GENIARKQNKYDELVEEAKTIKAEIEELTDELLNL 246
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 672074944 450 EM---DVTKVCGEMRFQLNKTKMEKDEAEKEHKEYKAKSQ-----KDLEMKDQEIEKLRLELSESTQQVEQEQQK 516
Cdd:PHA02562 247 VMdieDPSAALNKLNTAAAKIKSKIEQFQKVIKMYEKGGVcptctQQISEGPDRITKIKDKLKELQHSLEKLDTA 321
|
|
| Borrelia_P83 |
pfam05262 |
Borrelia P83/100 protein; This family consists of several Borrelia P83/P100 antigen proteins. |
365-523 |
5.74e-03 |
|
Borrelia P83/100 protein; This family consists of several Borrelia P83/P100 antigen proteins.
Pssm-ID: 114011 [Multi-domain] Cd Length: 489 Bit Score: 39.60 E-value: 5.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 365 EQLRSELERQTDrLEKELASQQEKRALEKEMIKKEVTREREEAEAKMLILSQNIAKLEAEIEKITREKTSAVSQLEEVQN 444
Cdd:pfam05262 184 EALREDNEKGVN-FRRDMTDLKERESQEDAKRAQQLKEELDKKQIDADKAQQKADFAQDNADKQRDEVRQKQQEAKNLPK 262
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 672074944 445 QLASQEMDVTKvcgemRFQLNKtkmeKDEAEKEHKEYKAKSQKDLEMKDQEIEKLRLELSESTQQVEQEQQKAARARQE 523
Cdd:pfam05262 263 PADTSSPKEDK-----QVAENQ----KREIEKAQIEIKKNDEEALKAKDHKAFDLKQESKASEKEAEDKELEAQKKREP 332
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
242-651 |
6.06e-03 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 40.00 E-value: 6.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 242 LESQLKLLRKDLVEYQKTCEDLKERLKHKESLVTAsassrvggLCLKCAQHEAVLSQT-----HNNVHIQTIETLTKERD 316
Cdd:TIGR04523 171 LENELNLLEKEKLNIQKNIDKIKNKLLKLELLLSN--------LKKKIQKNKSLESQIselkkQNNQLKDNIEKKQQEIN 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 317 DLMSVLVSVRSSLAEAQERETSAYKQVKHAVQMTEEAN---FEKTKALIQCEQLRSELERQTDR-LEKELASQQEKRALE 392
Cdd:TIGR04523 243 EKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNkkiKELEKQLNQLKSEISDLNNQKEQdWNKELKSELKNQEKK 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 393 KEMIKKEVT-----------------REREEAEAKMLILSQNIAKLEAEIEKITREKTSAVSQLEEVQNQ---LASQEMD 452
Cdd:TIGR04523 323 LEEIQNQISqnnkiisqlneqisqlkKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQindLESKIQN 402
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 453 VTKVCGEMRFQLNKTKMEKDEAEKEHKEYKA------KSQKDLEMKDQEIEKLRLELSESTQQVEQEQQKAAR----ARQ 522
Cdd:TIGR04523 403 QEKLNQQKDEQIKKLQQEKELLEKEIERLKEtiiknnSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRsinkIKQ 482
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 523 ECLQVTELLGESERQLHLTRLEKDSIQQSFSNEAKAQAlQALQREQELTQKIQQMETQHDKTDSEqyllLTSQNTFLTKl 602
Cdd:TIGR04523 483 NLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKIS-SLKEKIEKLESEKKEKESKISDLEDE----LNKDDFELKK- 556
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 672074944 603 keeccilaKKLEKVSLKSRSEIVQLSQEKRYLCDKLEKLQKRNDELEDQ 651
Cdd:TIGR04523 557 --------ENLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKE 597
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
359-513 |
6.56e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 38.75 E-value: 6.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 359 KALIQCEQLRSELERQTDRLEKELAsQQEKRALEKEMIKKEVTREREEAEAKMLILSQNIAKLEAEIEKITREK-----T 433
Cdd:COG1579 17 SELDRLEHRLKELPAELAELEDELA-ALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNNKeyealQ 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 434 SAVSQLEEVQNQLASQEMDVTKVCGEMRFQLNKTKMEKDEAEKEHKEYKAKSQKDLEMKDQEIEKLRLELSESTQQVEQE 513
Cdd:COG1579 96 KEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAEREELAAKIPPE 175
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
459-539 |
6.97e-03 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 39.68 E-value: 6.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 459 EMRFQLNKTKMEKDEAEKEHKEykaKSQKDLEMKDQEIEKLRLELSESTQQVEQEQQKAAR---ARQECLQVTELLGESE 535
Cdd:COG0542 415 ELERRLEQLEIEKEALKKEQDE---ASFERLAELRDELAELEEELEALKARWEAEKELIEEiqeLKEELEQRYGKIPELE 491
|
....
gi 672074944 536 RQLH 539
Cdd:COG0542 492 KELA 495
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
327-651 |
7.03e-03 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 39.49 E-value: 7.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 327 SSLAEAQERETSAYKQVKHAVQMTEEANFEKTKALIQCEQLRSELERQTDRLEKELASQQEKRAlEKEMIKKEVTREREE 406
Cdd:pfam07888 34 NRLEECLQERAELLQAQEAANRQREKEKERYKRDREQWERQRRELESRVAELKEELRQSREKHE-ELEEKYKELSASSEE 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 407 AEAKMLILSQNIAKLEAEIEkitrektsavsQLEEVQNQLASQEMDVTKVCGEMRFQLNKTKMEKDEAEKEHKEYKAKsq 486
Cdd:pfam07888 113 LSEEKDALLAQRAAHEARIR-----------ELEEDIKTLTQRVLERETELERMKERAKKAGAQRKEEEAERKQLQAK-- 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 487 kdLEMKDQEIEKLRLELSESTQQVEQEQQKAARARQECLQVTELLGESER---QLHLTRLEKDSIQQSFsnEAKAQALQA 563
Cdd:pfam07888 180 --LQQTEEELRSLSKEFQELRNSLAQRDTQVLQLQDTITTLTQKLTTAHRkeaENEALLEELRSLQERL--NASERKVEG 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 564 LQREqeltqkIQQMETQHDKTDSEqyllltsqntfLTKLKEECCILAKKLEKVSLKSRSEIVQLSQEKRYLCDKLEKLQK 643
Cdd:pfam07888 256 LGEE------LSSMAAQRDRTQAE-----------LHQARLQAAQLTLQLADASLALREGRARWAQERETLQQSAEADKD 318
|
....*...
gi 672074944 644 RNDELEDQ 651
Cdd:pfam07888 319 RIEKLSAE 326
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
365-578 |
7.06e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 39.77 E-value: 7.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 365 EQLRSELERQTDRLEKEL-ASQQEKRALEKEMIKKEVTRER------EEAEAKMLILSQNIAKLEAEIEKITREKTSAVS 437
Cdd:pfam01576 691 EQQVEEMKTQLEELEDELqATEDAKLRLEVNMQALKAQFERdlqardEQGEEKRRQLVKQVRELEAELEDERKQRAQAVA 770
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 438 QLEEVqnqlasqEMDVtkvcGEMRFQLNKTKMEKDEAEKEHKEYKAksqkdlEMKD--QEIEKLRLELSESTQQVEQEQQ 515
Cdd:pfam01576 771 AKKKL-------ELDL----KELEAQIDAANKGREEAVKQLKKLQA------QMKDlqRELEEARASRDEILAQSKESEK 833
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 672074944 516 KAARARQECLQVTELLGESERQLHLTRLEKDSIQQSFSNEAKAQALQaLQREQELTQKIQQME 578
Cdd:pfam01576 834 KLKNLEAELLQLQEDLAASERARRQAQQERDELADEIASGASGKSAL-QDEKRRLEARIAQLE 895
|
|
| DUF4175 |
pfam13779 |
Domain of unknown function (DUF4175); |
493-587 |
7.10e-03 |
|
Domain of unknown function (DUF4175);
Pssm-ID: 463981 [Multi-domain] Cd Length: 833 Bit Score: 39.59 E-value: 7.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 493 DQEIEKLRLELSESTQQVEQeqQKAARARQECLQVTELLGESERQLHLTRLEK--DSIQQSFSNEAKAQALQALQREQEL 570
Cdd:pfam13779 508 DEEIAKLMQELREALDDYMQ--ALAEQAQQNPQDLQQPDDPNAQEMTQQDLQRmlDRIEELARSGRRAEAQQMLSQLQQM 585
|
90
....*....|....*....
gi 672074944 571 TQKIQ--QMETQHDKTDSE 587
Cdd:pfam13779 586 LENLQagQPQQQQQQGQSE 604
|
|
| HEC1 |
COG5185 |
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell ... |
357-580 |
7.94e-03 |
|
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 444066 [Multi-domain] Cd Length: 594 Bit Score: 39.56 E-value: 7.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 357 KTKALIQCEQLRSELERQTDRLEKELASQQEKRALEKEMIKKEVTREREEAEAKMLILSQNIAKLEAEIEKITREKTSAV 436
Cdd:COG5185 266 RLEKLGENAESSKRLNENANNLIKQFENTKEKIAEYTKSIDIKKATESLEEQLAAAEAEQELEESKRETETGIQNLTAEI 345
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 437 SQLEE-VQNQLASQEMDVTKVCGEMRFQLNKTKME--KDEAEKEHKEYKAKSQKDLEMKDQEIEKLRLELSESTQQVEQE 513
Cdd:COG5185 346 EQGQEsLTENLEAIKEEIENIVGEVELSKSSEELDsfKDTIESTKESLDEIPQNQRGYAQEILATLEDTLKAADRQIEEL 425
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 672074944 514 QQKAARARQECLQVTELLGESERQLHLTRLEKDSIQQSF-SNEAKAQALQALQREQELTQKIQQMETQ 580
Cdd:COG5185 426 QRQIEQATSSNEEVSKLLNELISELNKVMREADEESQSRlEEAYDEINRSVRSKKEDLNEELTQIESR 493
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
128-588 |
9.40e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 39.15 E-value: 9.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 128 IHHLEAEVKFCKDELSSMKNRVQVVVLENERLQQELKSQRQEETLREQTLLDMSGNVQnswmktREDSRVIETTKRpfsH 207
Cdd:COG1196 248 LEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIA------RLEERRRELEER---L 318
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 208 GDAETGKAASTGDADKWRLELERLKLTYEAKTDLLESQLKLLRKDLVEYQKTCEDLKERLKHKESLVTASASsrvgglcl 287
Cdd:COG1196 319 EELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLE-------- 390
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 288 kcAQHEAVLSQTHNNVHIQTIETLTKERDDLMSVLVSVRSSLAEAQERETSAYKQVKHAVQMTEEANFEKTKALIQCEQL 367
Cdd:COG1196 391 --ALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAEL 468
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 368 RSELERQTDRLEKELASQQEKRALE---KEMIKKEVTREREEAEAKMLILSQNIAKLEAE-IEKITREKTSAVSQLEEVQ 443
Cdd:COG1196 469 LEEAALLEAALAELLEELAEAAARLlllLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVlIGVEAAYEAALEAALAAAL 548
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672074944 444 NQLASQEMDVTKVCGEMRFQLNKTKMEKDEAEKEHKEYKAKSQK--------------DLEMKDQEIEKLRLELSESTQQ 509
Cdd:COG1196 549 QNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALargaigaavdlvasDLREADARYYVLGDTLLGRTLV 628
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 672074944 510 VEQEQQKAARARQECLQVTELLGESERQLHLTRLEKDSIQQSFSNEAKAQALQALQREQELTQKIQQMETQHDKTDSEQ 588
Cdd:COG1196 629 AARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEER 707
|
|
| |
