|
Name |
Accession |
Description |
Interval |
E-value |
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1500-1749 |
5.84e-75 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
:
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 249.88 E-value: 5.84e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 1500 SPPFEYFIMAMIALNTVVLMMKFYDAPYE-YELMLKCLNIVFTSMFSMECVLKIIAFGV-LNYFRDAWNVFDFVTVLGSI 1577
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEEpLTTVLEILDYVFTGIFTLEMLLKIIAAGFkKRYFRSPWNILDFVVVLPSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 1578 TDILVTEIaetNNFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIALD 1657
Cdd:pfam00520 81 ISLVLSSV---GSLSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKT 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 1658 DDTSINRHNNFRTFLQALMLLFRSATGEAWHEIMLSCLsnracdpnanaSECGSDFAYFYFVSFIFLCSFLMLNLFVAVI 1737
Cdd:pfam00520 158 WENPDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTI-----------DGKGEFWAYIYFVSFIILGGFLLLNLFIAVI 226
|
250
....*....|..
gi 861446028 1738 MDNFEYLTRDSS 1749
Cdd:pfam00520 227 IDNFQELTERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
94-367 |
3.44e-67 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
:
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 227.54 E-value: 3.44e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 94 WPPFEYMILATIIANCIVLALEQHLPDgdKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFVFHkgsYLRNGWNVMDFVV 173
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQP--EEPLTTVLEILDYVFTGIFTLEMLLKIIAAGFKKR---YFRSPWNILDFVV 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 174 VLTGIL----ATAGTDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYMGKF 249
Cdd:pfam00520 76 VLPSLIslvlSSVGSLSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 250 HKacfpnstdadpvgdfpcgkdaparlcegdtecreyWPGPNFGITNFDNILFAILTVFQCITMEGWTDILYNTNDAAGN 329
Cdd:pfam00520 156 KT-----------------------------------WENPDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKGE 200
|
250 260 270
....*....|....*....|....*....|....*...
gi 861446028 330 TWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVE 367
Cdd:pfam00520 201 FWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELTERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1176-1410 |
3.16e-55 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
:
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 192.87 E-value: 3.16e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 1176 RYFETVILVVIALSSIALAAEDPVRTDSSRNNALKYMDYIFTGVFTFEMVIKMIDLGLLLHpgaYFRDLWNILDFIVVSG 1255
Cdd:pfam00520 2 RYFELFILLLILLNTIFLALETYFQPEEPLTTVLEILDYVFTGIFTLEMLLKIIAAGFKKR---YFRSPWNILDFVVVLP 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 1256 ALVAFAFSSFMGGSkgkdinTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFK 1335
Cdd:pfam00520 79 SLISLVLSSVGSLS------GLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFG 152
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 861446028 1336 GKFfyctdeskelerdcrgqyldyeKEEVEAQPRqwkkyDFHYDNVLWALLTLFTVSTGEGWPMVLKHSVDATYE 1410
Cdd:pfam00520 153 GKL----------------------KTWENPDNG-----RTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKGE 200
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
482-766 |
2.34e-49 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
:
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 176.30 E-value: 2.34e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 482 AQSFYWVVLCVVALNTLCVAMVHYNQPQ-RLTTALYFAEFVFLGLFLTEMSLKMYGLGP-RSYFRSSFNCFDFGVIVGSI 559
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEePLTTVLEILDYVFTGIFTLEMLLKIIAAGFkKRYFRSPWNILDFVVVLPSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 560 FEVVWAAIKPGtsFGISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFK 639
Cdd:pfam00520 81 ISLVLSSVGSL--SGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKTW 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 640 DE--TPTTNFDTFPAAILTVFQTgpdqaigpsdvhdcpfsrllphgplagspasihlvtgtqsqlsqiLTGEDWNAVMYH 717
Cdd:pfam00520 159 ENpdNGRTNFDNFPNAFLWLFQT---------------------------------------------MTTEGWGDIMYD 193
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 861446028 718 GIESQGgvskGMFSSFYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTK 766
Cdd:pfam00520 194 TIDGKG----EFWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELTERTE 238
|
|
| Ca_chan_IQ |
pfam08763 |
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular ... |
1822-1899 |
1.09e-41 |
|
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular calcium entry in response to changes in membrane potential. The isoleucine-glutamine (IQ) motif in the voltage gated calcium channel IQ domain interacts with hydrophobic pockets of Ca2+/calmodulin. The interaction regulates two self-regulatory calcium dependent feedback mechanism, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF).
:
Pssm-ID: 462591 Cd Length: 77 Bit Score: 147.74 E-value: 1.09e-41
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 861446028 1822 TSTLMALIRTALEIKLAPAGtKQHQCDAELRKEISSVWANLPQKTLDLLVPPHKPDEMTVGKVYAALMIFDFYKQNKT 1899
Cdd:pfam08763 1 TATLFALIRTSLKIKLAPAG-EMDQADAELRKIIKKIWPRLSQKTLDLLVPPPSDDEMTVGKIYAALLIQDYYRQNKA 77
|
|
| GPHH |
pfam16905 |
Voltage-dependent L-type calcium channel, IQ-associated; GPHH is a sequence motif found in ... |
1758-1811 |
1.37e-31 |
|
Voltage-dependent L-type calcium channel, IQ-associated; GPHH is a sequence motif found in this short domain on voltage-dependent L-type calcium channel proteins in eukaryotes. The domain is closely associated with the IQ-domain, pfam08763.
:
Pssm-ID: 465306 Cd Length: 54 Bit Score: 118.14 E-value: 1.37e-31
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 861446028 1758 EFIRVWAEYDPAACGRISYNDMFEMLKHMSPPLGLGKKCPARVAYKRLVRMNMP 1811
Cdd:pfam16905 1 EFVRVWAEYDPAATGRISYQDMYELLRRISPPLGFGKKCPARVAYKRLVRMNMP 54
|
|
| PHA03247 super family |
cl33720 |
large tegument protein UL36; Provisional |
2014-2338 |
7.20e-07 |
|
large tegument protein UL36; Provisional
The actual alignment was detected with superfamily member PHA03247:
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 54.94 E-value: 7.20e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 2014 DPDGEPQPGLQSQGRAASMPRLAAETQPAPdaSPMKRSISTLAQRPHG-AHLCSAALDRLAPGQVPHHHHHRCHRRRDKK 2092
Cdd:PHA03247 2546 DDAGDPPPPLPPAAPPAAPDRSVPPPRPAP--RPSEPAVTSRARRPDApPQSARPRAPVDDRGDPRGPAPPSPLPPDTHA 2623
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 2093 QKSLEKGPSLSADTDGAPSSTPGPGLA-PGEGPAGCRHERRQgRGRSQERRQPSSSSSEKQRfyscdrfgGREPPQPKPS 2171
Cdd:PHA03247 2624 PDPPPPSPSPAANEPDPHPPPTVPPPErPRDDPAPGRVSRPR-RARRLGRAAQASSPPQRPR--------RRAARPTVGS 2694
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 2172 VSSHPTSPTAGLEPAPAPQGGGSVTGSPLLSTS-------------------GASTPGRGGRRQLPQTPLTPRPSitykT 2232
Cdd:PHA03247 2695 LTSLADPPPPPPTPEPAPHALVSATPLPPGPAAarqaspalpaapappavpaGPATPGGPARPARPPTTAGPPAP----A 2770
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 2233 ANSSPVhfGGAQSSLSAfsPGRLSRGLSEHNALLQRDPLSQPLAPSSRIGSDPylgqrlDSEASAHALPEDTLTFEEAMA 2312
Cdd:PHA03247 2771 PPAAPA--AGPPRRLTR--PAVASLSESRESLPSPWDPADPPAAVLAPAAALP------PAASPAGPLPPPTSAQPTAPP 2840
|
330 340
....*....|....*....|....*.
gi 861446028 2313 SNSGRSSRTSYVSSLTSQSHPLRRVP 2338
Cdd:PHA03247 2841 PPPGPPPPSLPLGGSVAPGGDVRRRP 2866
|
|
| PHA03169 super family |
cl27451 |
hypothetical protein; Provisional |
902-1149 |
2.63e-04 |
|
hypothetical protein; Provisional
The actual alignment was detected with superfamily member PHA03169:
Pssm-ID: 223003 [Multi-domain] Cd Length: 413 Bit Score: 46.12 E-value: 2.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 902 KAPTTLPSASEQAQDQAGAQRADRMDGAEpgaRGEHARPRH-SRSKEATGGQEARGERSRGpeggrrhhrmhrhGPDPSK 980
Cdd:PHA03169 44 AKPAPPAPTTSGPQVRAVAEQGHRQTESD---TETAEESRHgEKEERGQGGPSGSGSESVG-------------SPTPSP 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 981 DKDKDGPVAKGERRARHRGPRAGPKEAESGEEPGrRHRARHKAPPTQEAMEKEGEGPEGDQEVRSRQLKDPPcdleargv 1060
Cdd:PHA03169 108 SGSAEELASGLSPENTSGSSPESPASHSPPPSPP-SHPGPHEPAPPESHNPSPNQQPSSFLQPSHEDSPEEP-------- 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 1061 mgvDPVHALPstclQKVEEQPEDADNQRNVTRMGSQPSDPStavhapvtltDPAGETtavPSGNVDLESQAEGKKEVEAD 1140
Cdd:PHA03169 179 ---EPPTSEP----EPDSPGPPQSETPTSSPPPQSPPDEPG----------EPQSPT---PQQAPSPNTQQAVEHEDEPT 238
|
....*....
gi 861446028 1141 DMLRSGPRP 1149
Cdd:PHA03169 239 EPEREGPPF 247
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1500-1749 |
5.84e-75 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 249.88 E-value: 5.84e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 1500 SPPFEYFIMAMIALNTVVLMMKFYDAPYE-YELMLKCLNIVFTSMFSMECVLKIIAFGV-LNYFRDAWNVFDFVTVLGSI 1577
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEEpLTTVLEILDYVFTGIFTLEMLLKIIAAGFkKRYFRSPWNILDFVVVLPSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 1578 TDILVTEIaetNNFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIALD 1657
Cdd:pfam00520 81 ISLVLSSV---GSLSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKT 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 1658 DDTSINRHNNFRTFLQALMLLFRSATGEAWHEIMLSCLsnracdpnanaSECGSDFAYFYFVSFIFLCSFLMLNLFVAVI 1737
Cdd:pfam00520 158 WENPDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTI-----------DGKGEFWAYIYFVSFIILGGFLLLNLFIAVI 226
|
250
....*....|..
gi 861446028 1738 MDNFEYLTRDSS 1749
Cdd:pfam00520 227 IDNFQELTERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
94-367 |
3.44e-67 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 227.54 E-value: 3.44e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 94 WPPFEYMILATIIANCIVLALEQHLPDgdKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFVFHkgsYLRNGWNVMDFVV 173
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQP--EEPLTTVLEILDYVFTGIFTLEMLLKIIAAGFKKR---YFRSPWNILDFVV 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 174 VLTGIL----ATAGTDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYMGKF 249
Cdd:pfam00520 76 VLPSLIslvlSSVGSLSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 250 HKacfpnstdadpvgdfpcgkdaparlcegdtecreyWPGPNFGITNFDNILFAILTVFQCITMEGWTDILYNTNDAAGN 329
Cdd:pfam00520 156 KT-----------------------------------WENPDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKGE 200
|
250 260 270
....*....|....*....|....*....|....*...
gi 861446028 330 TWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVE 367
Cdd:pfam00520 201 FWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELTERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1176-1410 |
3.16e-55 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 192.87 E-value: 3.16e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 1176 RYFETVILVVIALSSIALAAEDPVRTDSSRNNALKYMDYIFTGVFTFEMVIKMIDLGLLLHpgaYFRDLWNILDFIVVSG 1255
Cdd:pfam00520 2 RYFELFILLLILLNTIFLALETYFQPEEPLTTVLEILDYVFTGIFTLEMLLKIIAAGFKKR---YFRSPWNILDFVVVLP 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 1256 ALVAFAFSSFMGGSkgkdinTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFK 1335
Cdd:pfam00520 79 SLISLVLSSVGSLS------GLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFG 152
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 861446028 1336 GKFfyctdeskelerdcrgqyldyeKEEVEAQPRqwkkyDFHYDNVLWALLTLFTVSTGEGWPMVLKHSVDATYE 1410
Cdd:pfam00520 153 GKL----------------------KTWENPDNG-----RTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKGE 200
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
482-766 |
2.34e-49 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 176.30 E-value: 2.34e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 482 AQSFYWVVLCVVALNTLCVAMVHYNQPQ-RLTTALYFAEFVFLGLFLTEMSLKMYGLGP-RSYFRSSFNCFDFGVIVGSI 559
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEePLTTVLEILDYVFTGIFTLEMLLKIIAAGFkKRYFRSPWNILDFVVVLPSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 560 FEVVWAAIKPGtsFGISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFK 639
Cdd:pfam00520 81 ISLVLSSVGSL--SGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKTW 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 640 DE--TPTTNFDTFPAAILTVFQTgpdqaigpsdvhdcpfsrllphgplagspasihlvtgtqsqlsqiLTGEDWNAVMYH 717
Cdd:pfam00520 159 ENpdNGRTNFDNFPNAFLWLFQT---------------------------------------------MTTEGWGDIMYD 193
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 861446028 718 GIESQGgvskGMFSSFYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTK 766
Cdd:pfam00520 194 TIDGKG----EFWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELTERTE 238
|
|
| Ca_chan_IQ |
pfam08763 |
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular ... |
1822-1899 |
1.09e-41 |
|
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular calcium entry in response to changes in membrane potential. The isoleucine-glutamine (IQ) motif in the voltage gated calcium channel IQ domain interacts with hydrophobic pockets of Ca2+/calmodulin. The interaction regulates two self-regulatory calcium dependent feedback mechanism, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF).
Pssm-ID: 462591 Cd Length: 77 Bit Score: 147.74 E-value: 1.09e-41
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 861446028 1822 TSTLMALIRTALEIKLAPAGtKQHQCDAELRKEISSVWANLPQKTLDLLVPPHKPDEMTVGKVYAALMIFDFYKQNKT 1899
Cdd:pfam08763 1 TATLFALIRTSLKIKLAPAG-EMDQADAELRKIIKKIWPRLSQKTLDLLVPPPSDDEMTVGKIYAALLIQDYYRQNKA 77
|
|
| GPHH |
pfam16905 |
Voltage-dependent L-type calcium channel, IQ-associated; GPHH is a sequence motif found in ... |
1758-1811 |
1.37e-31 |
|
Voltage-dependent L-type calcium channel, IQ-associated; GPHH is a sequence motif found in this short domain on voltage-dependent L-type calcium channel proteins in eukaryotes. The domain is closely associated with the IQ-domain, pfam08763.
Pssm-ID: 465306 Cd Length: 54 Bit Score: 118.14 E-value: 1.37e-31
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 861446028 1758 EFIRVWAEYDPAACGRISYNDMFEMLKHMSPPLGLGKKCPARVAYKRLVRMNMP 1811
Cdd:pfam16905 1 EFVRVWAEYDPAATGRISYQDMYELLRRISPPLGFGKKCPARVAYKRLVRMNMP 54
|
|
| Ca_chan_IQ |
smart01062 |
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular ... |
1877-1907 |
2.65e-10 |
|
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular calcium entry in response to changes in membrane potential. The isoleucine-glutamine (IQ) motif in the voltage gated calcium channel IQ domain interacts with hydrophobic pockets of Ca2+/calmodulin. The interaction regulates two self-regulatory calcium dependent feedback mechanism, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF).
Pssm-ID: 198130 Cd Length: 31 Bit Score: 57.23 E-value: 2.65e-10
10 20 30
....*....|....*....|....*....|.
gi 861446028 1877 DEMTVGKVYAALMIFDFYKQNKTTRDQIHQA 1907
Cdd:smart01062 1 DELTVGKIYAAMLIQDYFRQFKSRKEQELLG 31
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
2014-2338 |
7.20e-07 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 54.94 E-value: 7.20e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 2014 DPDGEPQPGLQSQGRAASMPRLAAETQPAPdaSPMKRSISTLAQRPHG-AHLCSAALDRLAPGQVPHHHHHRCHRRRDKK 2092
Cdd:PHA03247 2546 DDAGDPPPPLPPAAPPAAPDRSVPPPRPAP--RPSEPAVTSRARRPDApPQSARPRAPVDDRGDPRGPAPPSPLPPDTHA 2623
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 2093 QKSLEKGPSLSADTDGAPSSTPGPGLA-PGEGPAGCRHERRQgRGRSQERRQPSSSSSEKQRfyscdrfgGREPPQPKPS 2171
Cdd:PHA03247 2624 PDPPPPSPSPAANEPDPHPPPTVPPPErPRDDPAPGRVSRPR-RARRLGRAAQASSPPQRPR--------RRAARPTVGS 2694
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 2172 VSSHPTSPTAGLEPAPAPQGGGSVTGSPLLSTS-------------------GASTPGRGGRRQLPQTPLTPRPSitykT 2232
Cdd:PHA03247 2695 LTSLADPPPPPPTPEPAPHALVSATPLPPGPAAarqaspalpaapappavpaGPATPGGPARPARPPTTAGPPAP----A 2770
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 2233 ANSSPVhfGGAQSSLSAfsPGRLSRGLSEHNALLQRDPLSQPLAPSSRIGSDPylgqrlDSEASAHALPEDTLTFEEAMA 2312
Cdd:PHA03247 2771 PPAAPA--AGPPRRLTR--PAVASLSESRESLPSPWDPADPPAAVLAPAAALP------PAASPAGPLPPPTSAQPTAPP 2840
|
330 340
....*....|....*....|....*.
gi 861446028 2313 SNSGRSSRTSYVSSLTSQSHPLRRVP 2338
Cdd:PHA03247 2841 PPPGPPPPSLPLGGSVAPGGDVRRRP 2866
|
|
| PHA03169 |
PHA03169 |
hypothetical protein; Provisional |
902-1149 |
2.63e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 223003 [Multi-domain] Cd Length: 413 Bit Score: 46.12 E-value: 2.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 902 KAPTTLPSASEQAQDQAGAQRADRMDGAEpgaRGEHARPRH-SRSKEATGGQEARGERSRGpeggrrhhrmhrhGPDPSK 980
Cdd:PHA03169 44 AKPAPPAPTTSGPQVRAVAEQGHRQTESD---TETAEESRHgEKEERGQGGPSGSGSESVG-------------SPTPSP 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 981 DKDKDGPVAKGERRARHRGPRAGPKEAESGEEPGrRHRARHKAPPTQEAMEKEGEGPEGDQEVRSRQLKDPPcdleargv 1060
Cdd:PHA03169 108 SGSAEELASGLSPENTSGSSPESPASHSPPPSPP-SHPGPHEPAPPESHNPSPNQQPSSFLQPSHEDSPEEP-------- 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 1061 mgvDPVHALPstclQKVEEQPEDADNQRNVTRMGSQPSDPStavhapvtltDPAGETtavPSGNVDLESQAEGKKEVEAD 1140
Cdd:PHA03169 179 ---EPPTSEP----EPDSPGPPQSETPTSSPPPQSPPDEPG----------EPQSPT---PQQAPSPNTQQAVEHEDEPT 238
|
....*....
gi 861446028 1141 DMLRSGPRP 1149
Cdd:PHA03169 239 EPEREGPPF 247
|
|
| AF-4 |
pfam05110 |
AF-4 proto-oncoprotein N-terminal region; This family consists of AF4 (Proto-oncogene AF4) and ... |
2014-2179 |
3.62e-03 |
|
AF-4 proto-oncoprotein N-terminal region; This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X E mental retardation syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental retardation. The family also contains a Drosophila AF4 protein homolog Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila.
Pssm-ID: 461550 [Multi-domain] Cd Length: 514 Bit Score: 42.42 E-value: 3.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 2014 DPDGEPQPGLQSQGRAASMPRLAAETQPAPDASPMKRSISTLaQRPHGAH--------LCSAALDRLAPGQvphhhhHRC 2085
Cdd:pfam05110 95 DKTSGLPPSFHTSSHSQPMGPPSSSSPSVSSSQSQKKSQART-EPAHGGHsssgsqssQRSQGQSRSKGGQ------ESH 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 2086 HRRRDKKQKSLEKGPSLSADTDGAPSSTPG-PGLAPGEGPAGCRHERRQGrgrsQERRQPSSSSSEKQRFYS---CDR-F 2160
Cdd:pfam05110 168 SSSHHKRQERREDLFSCASLSHSLEELSPLlSSLSSPVKPLSPSHSRQHT----GSKAQNSSDHHGKEYSHSkspRDSeA 243
|
170
....*....|....*....
gi 861446028 2161 GGREPPQPKPSVSSHPTSP 2179
Cdd:pfam05110 244 GSHGPESPSTSLLASSSQL 262
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1500-1749 |
5.84e-75 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 249.88 E-value: 5.84e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 1500 SPPFEYFIMAMIALNTVVLMMKFYDAPYE-YELMLKCLNIVFTSMFSMECVLKIIAFGV-LNYFRDAWNVFDFVTVLGSI 1577
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEEpLTTVLEILDYVFTGIFTLEMLLKIIAAGFkKRYFRSPWNILDFVVVLPSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 1578 TDILVTEIaetNNFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIALD 1657
Cdd:pfam00520 81 ISLVLSSV---GSLSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKT 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 1658 DDTSINRHNNFRTFLQALMLLFRSATGEAWHEIMLSCLsnracdpnanaSECGSDFAYFYFVSFIFLCSFLMLNLFVAVI 1737
Cdd:pfam00520 158 WENPDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTI-----------DGKGEFWAYIYFVSFIILGGFLLLNLFIAVI 226
|
250
....*....|..
gi 861446028 1738 MDNFEYLTRDSS 1749
Cdd:pfam00520 227 IDNFQELTERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
94-367 |
3.44e-67 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 227.54 E-value: 3.44e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 94 WPPFEYMILATIIANCIVLALEQHLPDgdKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFVFHkgsYLRNGWNVMDFVV 173
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQP--EEPLTTVLEILDYVFTGIFTLEMLLKIIAAGFKKR---YFRSPWNILDFVV 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 174 VLTGIL----ATAGTDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYMGKF 249
Cdd:pfam00520 76 VLPSLIslvlSSVGSLSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 250 HKacfpnstdadpvgdfpcgkdaparlcegdtecreyWPGPNFGITNFDNILFAILTVFQCITMEGWTDILYNTNDAAGN 329
Cdd:pfam00520 156 KT-----------------------------------WENPDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKGE 200
|
250 260 270
....*....|....*....|....*....|....*...
gi 861446028 330 TWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVE 367
Cdd:pfam00520 201 FWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELTERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1176-1410 |
3.16e-55 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 192.87 E-value: 3.16e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 1176 RYFETVILVVIALSSIALAAEDPVRTDSSRNNALKYMDYIFTGVFTFEMVIKMIDLGLLLHpgaYFRDLWNILDFIVVSG 1255
Cdd:pfam00520 2 RYFELFILLLILLNTIFLALETYFQPEEPLTTVLEILDYVFTGIFTLEMLLKIIAAGFKKR---YFRSPWNILDFVVVLP 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 1256 ALVAFAFSSFMGGSkgkdinTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFK 1335
Cdd:pfam00520 79 SLISLVLSSVGSLS------GLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFG 152
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 861446028 1336 GKFfyctdeskelerdcrgqyldyeKEEVEAQPRqwkkyDFHYDNVLWALLTLFTVSTGEGWPMVLKHSVDATYE 1410
Cdd:pfam00520 153 GKL----------------------KTWENPDNG-----RTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKGE 200
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
482-766 |
2.34e-49 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 176.30 E-value: 2.34e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 482 AQSFYWVVLCVVALNTLCVAMVHYNQPQ-RLTTALYFAEFVFLGLFLTEMSLKMYGLGP-RSYFRSSFNCFDFGVIVGSI 559
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEePLTTVLEILDYVFTGIFTLEMLLKIIAAGFkKRYFRSPWNILDFVVVLPSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 560 FEVVWAAIKPGtsFGISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFK 639
Cdd:pfam00520 81 ISLVLSSVGSL--SGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKTW 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 640 DE--TPTTNFDTFPAAILTVFQTgpdqaigpsdvhdcpfsrllphgplagspasihlvtgtqsqlsqiLTGEDWNAVMYH 717
Cdd:pfam00520 159 ENpdNGRTNFDNFPNAFLWLFQT---------------------------------------------MTTEGWGDIMYD 193
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 861446028 718 GIESQGgvskGMFSSFYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTK 766
Cdd:pfam00520 194 TIDGKG----EFWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELTERTE 238
|
|
| Ca_chan_IQ |
pfam08763 |
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular ... |
1822-1899 |
1.09e-41 |
|
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular calcium entry in response to changes in membrane potential. The isoleucine-glutamine (IQ) motif in the voltage gated calcium channel IQ domain interacts with hydrophobic pockets of Ca2+/calmodulin. The interaction regulates two self-regulatory calcium dependent feedback mechanism, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF).
Pssm-ID: 462591 Cd Length: 77 Bit Score: 147.74 E-value: 1.09e-41
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 861446028 1822 TSTLMALIRTALEIKLAPAGtKQHQCDAELRKEISSVWANLPQKTLDLLVPPHKPDEMTVGKVYAALMIFDFYKQNKT 1899
Cdd:pfam08763 1 TATLFALIRTSLKIKLAPAG-EMDQADAELRKIIKKIWPRLSQKTLDLLVPPPSDDEMTVGKIYAALLIQDYYRQNKA 77
|
|
| GPHH |
pfam16905 |
Voltage-dependent L-type calcium channel, IQ-associated; GPHH is a sequence motif found in ... |
1758-1811 |
1.37e-31 |
|
Voltage-dependent L-type calcium channel, IQ-associated; GPHH is a sequence motif found in this short domain on voltage-dependent L-type calcium channel proteins in eukaryotes. The domain is closely associated with the IQ-domain, pfam08763.
Pssm-ID: 465306 Cd Length: 54 Bit Score: 118.14 E-value: 1.37e-31
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 861446028 1758 EFIRVWAEYDPAACGRISYNDMFEMLKHMSPPLGLGKKCPARVAYKRLVRMNMP 1811
Cdd:pfam16905 1 EFVRVWAEYDPAATGRISYQDMYELLRRISPPLGFGKKCPARVAYKRLVRMNMP 54
|
|
| PKD_channel |
pfam08016 |
Polycystin cation channel; This family contains the cation channel region from group II of ... |
1523-1742 |
2.28e-11 |
|
Polycystin cation channel; This family contains the cation channel region from group II of Transient receptor potential (TRP) channels, the TRPP subfamily, including PKD1, PKD2, PKD2L and mucolipin proteins.
Pssm-ID: 462341 [Multi-domain] Cd Length: 225 Bit Score: 65.76 E-value: 2.28e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 1523 YDAPYEYELMLkCLNI--VFTSMFSMECVLKIIAFGvLNYFRDAWNVFDFVTVLGSIT--------DILVTE-----IAE 1587
Cdd:pfam08016 2 YVTNRSLFILL-CEIVfvVFFLYFVVEEILKIRKHR-PSYLRSVWNLLDLAIVILSVVlivlniyrDFLADRliksvEAS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 1588 TNNFIN--------------LSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGN 1653
Cdd:pfam08016 80 PVTFIDfdrvaqldnlyriiLAFLVFLTWLKLFKVLRFNKTMSLFTKTLSRAWKDLAGFALMFVIFFFAYAQFGYLLFGT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 1654 ialdddtsinRHNNFRTFLQALMLLFRsatgeawheIMLSCLSNRACDpnanasECGSDFAYFYFVSFIFLCSFLMLNLF 1733
Cdd:pfam08016 160 ----------QAPNFSNFVKSILTLFR---------TILGDFGYNEIF------SGNRVLGPLLFLTFVFLVIFILLNLF 214
|
....*....
gi 861446028 1734 VAVIMDNFE 1742
Cdd:pfam08016 215 LAIINDSYV 223
|
|
| Ca_chan_IQ |
smart01062 |
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular ... |
1877-1907 |
2.65e-10 |
|
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular calcium entry in response to changes in membrane potential. The isoleucine-glutamine (IQ) motif in the voltage gated calcium channel IQ domain interacts with hydrophobic pockets of Ca2+/calmodulin. The interaction regulates two self-regulatory calcium dependent feedback mechanism, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF).
Pssm-ID: 198130 Cd Length: 31 Bit Score: 57.23 E-value: 2.65e-10
10 20 30
....*....|....*....|....*....|.
gi 861446028 1877 DEMTVGKVYAALMIFDFYKQNKTTRDQIHQA 1907
Cdd:smart01062 1 DELTVGKIYAAMLIQDYFRQFKSRKEQELLG 31
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
2014-2338 |
7.20e-07 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 54.94 E-value: 7.20e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 2014 DPDGEPQPGLQSQGRAASMPRLAAETQPAPdaSPMKRSISTLAQRPHG-AHLCSAALDRLAPGQVPHHHHHRCHRRRDKK 2092
Cdd:PHA03247 2546 DDAGDPPPPLPPAAPPAAPDRSVPPPRPAP--RPSEPAVTSRARRPDApPQSARPRAPVDDRGDPRGPAPPSPLPPDTHA 2623
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 2093 QKSLEKGPSLSADTDGAPSSTPGPGLA-PGEGPAGCRHERRQgRGRSQERRQPSSSSSEKQRfyscdrfgGREPPQPKPS 2171
Cdd:PHA03247 2624 PDPPPPSPSPAANEPDPHPPPTVPPPErPRDDPAPGRVSRPR-RARRLGRAAQASSPPQRPR--------RRAARPTVGS 2694
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 2172 VSSHPTSPTAGLEPAPAPQGGGSVTGSPLLSTS-------------------GASTPGRGGRRQLPQTPLTPRPSitykT 2232
Cdd:PHA03247 2695 LTSLADPPPPPPTPEPAPHALVSATPLPPGPAAarqaspalpaapappavpaGPATPGGPARPARPPTTAGPPAP----A 2770
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 2233 ANSSPVhfGGAQSSLSAfsPGRLSRGLSEHNALLQRDPLSQPLAPSSRIGSDPylgqrlDSEASAHALPEDTLTFEEAMA 2312
Cdd:PHA03247 2771 PPAAPA--AGPPRRLTR--PAVASLSESRESLPSPWDPADPPAAVLAPAAALP------PAASPAGPLPPPTSAQPTAPP 2840
|
330 340
....*....|....*....|....*.
gi 861446028 2313 SNSGRSSRTSYVSSLTSQSHPLRRVP 2338
Cdd:PHA03247 2841 PPPGPPPPSLPLGGSVAPGGDVRRRP 2866
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1983-2240 |
2.86e-06 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 52.87 E-value: 2.86e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 1983 APLERGHSAEIPVGQRGtLAVDVQMQSAALRDPD--GEPQPGLQSQGRAASMPRL--AAETQPAPDASPM-------KRS 2051
Cdd:PHA03307 155 AGASPAAVASDAASSRQ-AALPLSSPEETARAPSspPAEPPPSTPPAAASPRPPRrsSPISASASSPAPApgrsaadDAG 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 2052 ISTLAQRPHGAHLCSAALDRLAPGQVPHHHHHRCHRRRDK--KQKSLEKGPSLSADTDGAPSSTPGPGlAPGEGPA--GC 2127
Cdd:PHA03307 234 ASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASgwNGPSSRPGPASSSSSPRERSPSPSPS-SPGSGPApsSP 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 2128 RHERRQGRGRSQERRQPSSSS-SEKQRFYSCDRFGGREPPQPKPSVSSHPTSPTAGLEPAPAPQGGGSVTGSPLLSTSGA 2206
Cdd:PHA03307 313 RASSSSSSSRESSSSSTSSSSeSSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRARA 392
|
250 260 270
....*....|....*....|....*....|....
gi 861446028 2207 STPGRGGRRQLPQTPLTPRPSITYKTANSSPVHF 2240
Cdd:PHA03307 393 AVAGRARRRDATGRFPAGRPRPSPLDAGAASGAF 426
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1972-2354 |
7.73e-06 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 51.71 E-value: 7.73e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 1972 QRTQEALYEARAPLERGHSAEIPV--GQRGTLAVDVQMQSAALRDPDGEPQPG-----LQSQGRAASMPRL--AAETQPA 2042
Cdd:PHA03307 22 PRPPATPGDAADDLLSGSQGQLVSdsAELAAVTVVAGAAACDRFEPPTGPPPGpgteaPANESRSTPTWSLstLAPASPA 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 2043 PDASPMKRSISTLAQRPhgahlcsAALDRLAPGQVPHHHHHrchrrrdkkqkslEKGPSLSADTDGAPSSTPGPGLAPGE 2122
Cdd:PHA03307 102 REGSPTPPGPSSPDPPP-------PTPPPASPPPSPAPDLS-------------EMLRPVGSPGPPPAASPPAAGASPAA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 2123 GPAGCRHERRQGRGRSQ-ERRQPSSSSSEKQRFYSCDRFGGREPPQPKPSVSSHPTSPtaglepaPAPQGGGSVTGSPLL 2201
Cdd:PHA03307 162 VASDAASSRQAALPLSSpEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASS-------PAPAPGRSAADDAGA 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 2202 STSGASTPGRGGRRQLPQTpLTPRPSITYKTANSSPVHFGGAQSSLSAFSPGRLSRGLSEHNALLQRDPLSQPLAPSSRI 2281
Cdd:PHA03307 235 SSSDSSSSESSGCGWGPEN-ECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPR 313
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 861446028 2282 GSDPYLGQR---LDSEASAHALPEDTLTFEEAMASNSGRSSRTSYVS--SLTSQSHPLRRVPNGYHCTLGLSTGGRAR 2354
Cdd:PHA03307 314 ASSSSSSSRessSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPAdpSSPRKRPRPSRAPSSPAASAGRPTRRRAR 391
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
2009-2307 |
1.15e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 51.09 E-value: 1.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 2009 SAALRDPDGEPQPGL---QSQGRAASMPRLAAETQPAPDASPMKRSISTL--AQRPHGAHLCSAALDRLAPGQVPHHHhh 2083
Cdd:PHA03247 2769 PAPPAAPAAGPPRRLtrpAVASLSESRESLPSPWDPADPPAAVLAPAAALppAASPAGPLPPPTSAQPTAPPPPPGPP-- 2846
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 2084 rchrrrdkkQKSLEKGPSLSAdtdGAPSSTPGPGLAPGEGPAGCRHERRQGRGRSQERRQPSS---------------SS 2148
Cdd:PHA03247 2847 ---------PPSLPLGGSVAP---GGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESfalppdqperppqpqAP 2914
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 2149 SEKQRFYSCDRFGGREPPQPKPSVSSHPTSPTAGLEPAPAPQGGgsvTGSPLLstsGASTPGRGG--RRQLPQtpltPRP 2226
Cdd:PHA03247 2915 PPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGA---VPQPWL---GALVPGRVAvpRFRVPQ----PAP 2984
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 2227 SITYKTANSSPVHfggaQSSLSAFSPGRLSRGLSEhnallQRDP----LSQPLAPS---------SRIGSDPylgQRLDS 2293
Cdd:PHA03247 2985 SREAPASSTPPLT----GHSLSRVSSWASSLALHE-----ETDPppvsLKQTLWPPddtedsdadSLFDSDS---ERSDL 3052
|
330
....*....|....
gi 861446028 2294 EASAHALPEDTLTF 2307
Cdd:PHA03247 3053 EALDPLPPEPHDPF 3066
|
|
| PHA03169 |
PHA03169 |
hypothetical protein; Provisional |
902-1149 |
2.63e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 223003 [Multi-domain] Cd Length: 413 Bit Score: 46.12 E-value: 2.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 902 KAPTTLPSASEQAQDQAGAQRADRMDGAEpgaRGEHARPRH-SRSKEATGGQEARGERSRGpeggrrhhrmhrhGPDPSK 980
Cdd:PHA03169 44 AKPAPPAPTTSGPQVRAVAEQGHRQTESD---TETAEESRHgEKEERGQGGPSGSGSESVG-------------SPTPSP 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 981 DKDKDGPVAKGERRARHRGPRAGPKEAESGEEPGrRHRARHKAPPTQEAMEKEGEGPEGDQEVRSRQLKDPPcdleargv 1060
Cdd:PHA03169 108 SGSAEELASGLSPENTSGSSPESPASHSPPPSPP-SHPGPHEPAPPESHNPSPNQQPSSFLQPSHEDSPEEP-------- 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 1061 mgvDPVHALPstclQKVEEQPEDADNQRNVTRMGSQPSDPStavhapvtltDPAGETtavPSGNVDLESQAEGKKEVEAD 1140
Cdd:PHA03169 179 ---EPPTSEP----EPDSPGPPQSETPTSSPPPQSPPDEPG----------EPQSPT---PQQAPSPNTQQAVEHEDEPT 238
|
....*....
gi 861446028 1141 DMLRSGPRP 1149
Cdd:PHA03169 239 EPEREGPPF 247
|
|
| PRK12678 |
PRK12678 |
transcription termination factor Rho; Provisional |
868-1047 |
2.63e-04 |
|
transcription termination factor Rho; Provisional
Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 46.44 E-value: 2.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 868 SRDGPRGPTGGKAQSEATEAMDPPRRHHRHRDRDKAPTTLPSASEQAQDQAGAQRADRMDGAEPGARGEHARPRHSRSKE 947
Cdd:PRK12678 79 RAARAAAAARQAEQPAAEAAAAKAEAAPAARAAAAAAAEAASAPEAAQARERRERGEAARRGAARKAGEGGEQPATEARA 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 948 ATGGQEARGERSRGPEggrrhhrmhrhgpdpskdkDKDGPVAKGERRARHRGPRAGPKEAESGEEPGRRHRARHKApptq 1027
Cdd:PRK12678 159 DAAERTEEEERDERRR-------------------RGDREDRQAEAERGERGRREERGRDGDDRDRRDRREQGDRR---- 215
|
170 180
....*....|....*....|
gi 861446028 1028 eamEKEGEGPEGDQEVRSRQ 1047
Cdd:PRK12678 216 ---EERGRRDGGDRRGRRRR 232
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
2009-2336 |
1.97e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 43.62 E-value: 1.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 2009 SAALRDPDGEPqpglqsqGRAASMPRLAAETQPAPDASPMKRSISTLAQRPHGAhlcsAALDRLAPGQVPHHHHHRCHRR 2088
Cdd:PHA03307 755 DALFSNPSLVP-------AKLAEALALLEPAEPQRGAGSSPPVRAEAAFRRPGR----LRRSGPAADAASRTASKRKSRS 823
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 2089 RDKKQKSLEKGPSLSAdtdGAPSSTPGPGLAPGEGPAGcrherRQGRGRSQERRQPSSSSSEKQRfyscdrfggREPPQP 2168
Cdd:PHA03307 824 HTPDGGSESSGPARPP---GAAARPPPARSSESSKSKP-----AAAGGRARGKNGRRRPRPPEPR---------ARPGAA 886
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 2169 KPSVSSHPTSPTAGLEPAPAPQGGGSVTGSPLlstsGASTPGRGGRRQLPQTPLTPRPSityktansspvhfggaQSSLS 2248
Cdd:PHA03307 887 APPKAAAAAPPAGAPAPRPRPAPRVKLGPMPP----GGPDPRGGFRRVPPGDLHTPAPS----------------AAALA 946
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 2249 AFSPGRLSRGLSEHnallqrdplsqPLAPssrigsdpylgqrldsEASAHAlpedtLTFE-EAMAS-----NSGRSSRTS 2322
Cdd:PHA03307 947 AYCPPEVVAELVDH-----------PLFP----------------EPWRPA-----LAFDpEALAEiaarcGGPPPRSGS 994
|
330
....*....|....
gi 861446028 2323 YVSSLTSqSHPLRR 2336
Cdd:PHA03307 995 AFGPLRA-SGPLRR 1007
|
|
| AF-4 |
pfam05110 |
AF-4 proto-oncoprotein N-terminal region; This family consists of AF4 (Proto-oncogene AF4) and ... |
2014-2179 |
3.62e-03 |
|
AF-4 proto-oncoprotein N-terminal region; This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X E mental retardation syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental retardation. The family also contains a Drosophila AF4 protein homolog Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila.
Pssm-ID: 461550 [Multi-domain] Cd Length: 514 Bit Score: 42.42 E-value: 3.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 2014 DPDGEPQPGLQSQGRAASMPRLAAETQPAPDASPMKRSISTLaQRPHGAH--------LCSAALDRLAPGQvphhhhHRC 2085
Cdd:pfam05110 95 DKTSGLPPSFHTSSHSQPMGPPSSSSPSVSSSQSQKKSQART-EPAHGGHsssgsqssQRSQGQSRSKGGQ------ESH 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 2086 HRRRDKKQKSLEKGPSLSADTDGAPSSTPG-PGLAPGEGPAGCRHERRQGrgrsQERRQPSSSSSEKQRFYS---CDR-F 2160
Cdd:pfam05110 168 SSSHHKRQERREDLFSCASLSHSLEELSPLlSSLSSPVKPLSPSHSRQHT----GSKAQNSSDHHGKEYSHSkspRDSeA 243
|
170
....*....|....*....
gi 861446028 2161 GGREPPQPKPSVSSHPTSP 2179
Cdd:pfam05110 244 GSHGPESPSTSLLASSSQL 262
|
|
| Hamartin |
pfam04388 |
Hamartin protein; This family includes the hamartin protein which is thought to function as a ... |
2090-2285 |
4.38e-03 |
|
Hamartin protein; This family includes the hamartin protein which is thought to function as a tumour suppressor. The hamartin protein interacts with the tuberin protein pfam03542. Tuberous sclerosis complex (TSC) is an autosomal dominant disorder and is characterized by the presence of hamartomas in many organs, such as brain, skin, heart, lung, and kidney. It is caused by mutation either TSC1 or TSC2 tumour suppressor gene. TSC1 encodes a protein, hamartin, containing two coiled-coil regions, which have been shown to mediate binding to tuberin. The TSC2 gene codes for tuberin pfam03542. These two proteins function within the same pathway(s) regulating cell cycle, cell growth, adhesion, and vesicular trafficking.
Pssm-ID: 461287 [Multi-domain] Cd Length: 730 Bit Score: 42.35 E-value: 4.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 2090 DKKQKSLEKGpSLSADTDgaPSSTPGPGLAPGEGPAGCRH---ERRQGRGRSQERRQPSSSSSEkqrfyscdRFGGREPP 2166
Cdd:pfam04388 259 DPKEASCEEG-YSSSAAD--PTASPYTDQQSSYGSSTSTPsstPRLQLSSSSGTSPPYLSPPSI--------RLKTDSFP 327
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 2167 QPKPSVSSH-PTSPTA-GLEPAPAPQGGGSvtgSPLLSTSGASTPGRGGRRQLPQTPLT-PRPSITYKTANSSPVHfgGA 2243
Cdd:pfam04388 328 LWSPSSVCGmTTPPTSpGMVPTTPSELSPS---SSHLSSRGSSPPEAAGEATPETTPAKdSPYLKQPPPLSDSHVH--RA 402
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 861446028 2244 QSSLSA-FSPGRLSRGLSEHNALLQRdplSQPLAPSSRIGSDP 2285
Cdd:pfam04388 403 LPASSQpSSPPRKDGRSQSSFPPLSK---QAPTNPNSRGLLEP 442
|
|
| PRK12678 |
PRK12678 |
transcription termination factor Rho; Provisional |
868-1047 |
8.04e-03 |
|
transcription termination factor Rho; Provisional
Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 41.43 E-value: 8.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 868 SRDGPRGPTGGKAQSEATEAMDPPRRHHRHRDRDKAPTTLPSASEQAQDQAGAQRADRMD-------GAEPGARGEHARP 940
Cdd:PRK12678 81 ARAAAAARQAEQPAAEAAAAKAEAAPAARAAAAAAAEAASAPEAAQARERRERGEAARRGaarkageGGEQPATEARADA 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 941 RHSRSKEATGGQEARGERS-RGPEGGRRHHRMHRHGPDPSKDKDKDGPVAKGERRARHRGPRAGPKEAESGEEPGRRHRA 1019
Cdd:PRK12678 161 AERTEEEERDERRRRGDREdRQAEAERGERGRREERGRDGDDRDRRDRREQGDRREERGRRDGGDRRGRRRRRDRRDARG 240
|
170 180
....*....|....*....|....*...
gi 861446028 1020 RHKAPPTQEAMEKEGEGPEGDQEVRSRQ 1047
Cdd:PRK12678 241 DDNREDRGDRDGDDGEGRGGRRGRRFRD 268
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
847-1026 |
8.54e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 41.70 E-value: 8.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 847 TSRHLRPDMKTHLDRPLVVEHSRDGPRGPTGGKAQSEATEAMDPPRRHHRHRDRDKAPTTLPSASEQAQDQAGAQradrm 926
Cdd:PHA03307 197 TPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWE----- 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446028 927 dgaepGARGEHARPRHSRSKEATGGQEARGE----RSRGPEGGRRHHRMHRHGPDPSKDKDKDGPVAKGER-------RA 995
Cdd:PHA03307 272 -----ASGWNGPSSRPGPASSSSSPRERSPSpspsSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRgaavspgPS 346
|
170 180 190
....*....|....*....|....*....|..
gi 861446028 996 RHRGPRAG-PKEAESGEEPGRRHRARHKAPPT 1026
Cdd:PHA03307 347 PSRSPSPSrPPPPADPSSPRKRPRPSRAPSSP 378
|
|
| |
