|
Name |
Accession |
Description |
Interval |
E-value |
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1449-1698 |
1.06e-74 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
:
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 249.11 E-value: 1.06e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 1449 SPPFEYFIMAMIALNTVVLMMKFYDAPYE-YELMLKCLNIVFTSMFSMECVLKIIAFGV-LNYFRDAWNVFDFVTVLGSI 1526
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEEpLTTVLEILDYVFTGIFTLEMLLKIIAAGFkKRYFRSPWNILDFVVVLPSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 1527 TDILVTEIaetNNFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIALD 1606
Cdd:pfam00520 81 ISLVLSSV---GSLSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKT 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 1607 DDTSINRHNNFRTFLQALMLLFRSATGEAWHEIMLSCLsnracdpnanaSECGSDFAYFYFVSFIFLCSFLMLNLFVAVI 1686
Cdd:pfam00520 158 WENPDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTI-----------DGKGEFWAYIYFVSFIILGGFLLLNLFIAVI 226
|
250
....*....|..
gi 861446033 1687 MDNFEYLTRDSS 1698
Cdd:pfam00520 227 IDNFQELTERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
94-367 |
6.00e-67 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
:
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 226.76 E-value: 6.00e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 94 WPPFEYMILATIIANCIVLALEQHLPDgdKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFVFHkgsYLRNGWNVMDFVV 173
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQP--EEPLTTVLEILDYVFTGIFTLEMLLKIIAAGFKKR---YFRSPWNILDFVV 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 174 VLTGIL----ATAGTDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYMGKF 249
Cdd:pfam00520 76 VLPSLIslvlSSVGSLSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 250 HKacfpnstdadpvgdfpcgkdaparlcegdtecreyWPGPNFGITNFDNILFAILTVFQCITMEGWTDILYNTNDAAGN 329
Cdd:pfam00520 156 KT-----------------------------------WENPDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKGE 200
|
250 260 270
....*....|....*....|....*....|....*...
gi 861446033 330 TWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVE 367
Cdd:pfam00520 201 FWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELTERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
481-720 |
1.72e-56 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
:
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 196.72 E-value: 1.72e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 481 AQSFYWVVLCVVALNTLCVAMVHYNQPQ-RLTTALYFAEFVFLGLFLTEMSLKMYGLGP-RSYFRSSFNCFDFGVIVGSI 558
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEePLTTVLEILDYVFTGIFTLEMLLKIIAAGFkKRYFRSPWNILDFVVVLPSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 559 FEVVWAAIKPGtsFGISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFK 638
Cdd:pfam00520 81 ISLVLSSVGSL--SGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKTW 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 639 DE--TPTTNFDTFPAAILTVFQILTGEDWNAVMYHGIESQGgvskGMFSSFYFIVLTLFGNYTLLNVFLAIAVDNLANAQ 716
Cdd:pfam00520 159 ENpdNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKG----EFWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELT 234
|
....
gi 861446033 717 ELTK 720
Cdd:pfam00520 235 ERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1129-1359 |
6.49e-55 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
:
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 192.10 E-value: 6.49e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 1129 RYFETVILVVIALSSIALAAEDPVRTDSSRNNALKYMDYIFTGVFTFEMVIKMIDLGLLLHpgaYFRDLWNILDFIVVSG 1208
Cdd:pfam00520 2 RYFELFILLLILLNTIFLALETYFQPEEPLTTVLEILDYVFTGIFTLEMLLKIIAAGFKKR---YFRSPWNILDFVVVLP 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 1209 ALVAFAFSGSKGkdINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKFf 1288
Cdd:pfam00520 79 SLISLVLSSVGS--LSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKL- 155
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 861446033 1289 yctdeskelerdcrgqyldyeKEEVEAQPRqwkkyDFHYDNVLWALLTLFTVSTGEGWPMVLKHSVDATYE 1359
Cdd:pfam00520 156 ---------------------KTWENPDNG-----RTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKGE 200
|
|
| Ca_chan_IQ |
pfam08763 |
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular ... |
1771-1848 |
1.36e-41 |
|
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular calcium entry in response to changes in membrane potential. The isoleucine-glutamine (IQ) motif in the voltage gated calcium channel IQ domain interacts with hydrophobic pockets of Ca2+/calmodulin. The interaction regulates two self-regulatory calcium dependent feedback mechanism, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF).
:
Pssm-ID: 462591 Cd Length: 77 Bit Score: 147.74 E-value: 1.36e-41
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 861446033 1771 TSTLMALIRTALEIKLAPAGtKQHQCDAELRKEISSVWANLPQKTLDLLVPPHKPDEMTVGKVYAALMIFDFYKQNKT 1848
Cdd:pfam08763 1 TATLFALIRTSLKIKLAPAG-EMDQADAELRKIIKKIWPRLSQKTLDLLVPPPSDDEMTVGKIYAALLIQDYYRQNKA 77
|
|
| GPHH |
pfam16905 |
Voltage-dependent L-type calcium channel, IQ-associated; GPHH is a sequence motif found in ... |
1707-1760 |
1.31e-31 |
|
Voltage-dependent L-type calcium channel, IQ-associated; GPHH is a sequence motif found in this short domain on voltage-dependent L-type calcium channel proteins in eukaryotes. The domain is closely associated with the IQ-domain, pfam08763.
:
Pssm-ID: 465306 Cd Length: 54 Bit Score: 118.14 E-value: 1.31e-31
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 861446033 1707 EFIRVWAEYDPAACGRISYNDMFEMLKHMSPPLGLGKKCPARVAYKRLVRMNMP 1760
Cdd:pfam16905 1 EFVRVWAEYDPAATGRISYQDMYELLRRISPPLGFGKKCPARVAYKRLVRMNMP 54
|
|
| PHA03247 super family |
cl33720 |
large tegument protein UL36; Provisional |
1963-2287 |
5.70e-07 |
|
large tegument protein UL36; Provisional
The actual alignment was detected with superfamily member PHA03247:
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 55.33 E-value: 5.70e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 1963 DPDGEPQPGLQSQGRAASMPRLAAETQPAPdaSPMKRSISTLAQRPHG-AHLCSAALDRLAPGQVPHHHHHRCHRRRDKK 2041
Cdd:PHA03247 2546 DDAGDPPPPLPPAAPPAAPDRSVPPPRPAP--RPSEPAVTSRARRPDApPQSARPRAPVDDRGDPRGPAPPSPLPPDTHA 2623
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 2042 QKSLEKGPSLSADTDGAPSSTPGPGLA-PGEGPAGCRHERRQgRGRSQERRQPSSSSSEKQRfyscdrfgGREPPQPKPS 2120
Cdd:PHA03247 2624 PDPPPPSPSPAANEPDPHPPPTVPPPErPRDDPAPGRVSRPR-RARRLGRAAQASSPPQRPR--------RRAARPTVGS 2694
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 2121 VSSHPTSPTAGLEPAPAPQGGGSVTGSPLLSTS-------------------GASTPGRGGRRQLPQTPLTPRPSitykT 2181
Cdd:PHA03247 2695 LTSLADPPPPPPTPEPAPHALVSATPLPPGPAAarqaspalpaapappavpaGPATPGGPARPARPPTTAGPPAP----A 2770
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 2182 ANSSPVhfGGAQSSLSAfsPGRLSRGLSEHNALLQRDPLSQPLAPSSRIGSDPylgqrlDSEASAHALPEDTLTFEEAMA 2261
Cdd:PHA03247 2771 PPAAPA--AGPPRRLTR--PAVASLSESRESLPSPWDPADPPAAVLAPAAALP------PAASPAGPLPPPTSAQPTAPP 2840
|
330 340
....*....|....*....|....*.
gi 861446033 2262 SNSGRSSRTSYVSSLTSQSHPLRRVP 2287
Cdd:PHA03247 2841 PPPGPPPPSLPLGGSVAPGGDVRRRP 2866
|
|
| PHA03169 super family |
cl27451 |
hypothetical protein; Provisional |
855-1102 |
2.22e-04 |
|
hypothetical protein; Provisional
The actual alignment was detected with superfamily member PHA03169:
Pssm-ID: 223003 [Multi-domain] Cd Length: 413 Bit Score: 46.12 E-value: 2.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 855 KAPTTLPSASEQAQDQAGAQRADRMDGAEpgaRGEHARPRH-SRSKEATGGQEARGERSRGpeggrrhhrmhrhGPDPSK 933
Cdd:PHA03169 44 AKPAPPAPTTSGPQVRAVAEQGHRQTESD---TETAEESRHgEKEERGQGGPSGSGSESVG-------------SPTPSP 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 934 DKDKDGPVAKGERRARHRGPRAGPKEAESGEEPGrRHRARHKAPPTQEAMEKEGEGPEGDQEVRSRQLKDPPcdleargv 1013
Cdd:PHA03169 108 SGSAEELASGLSPENTSGSSPESPASHSPPPSPP-SHPGPHEPAPPESHNPSPNQQPSSFLQPSHEDSPEEP-------- 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 1014 mgvDPVHALPstclQKVEEQPEDADNQRNVTRMGSQPSDPStavhapvtltDPAGETtavPSGNVDLESQAEGKKEVEAD 1093
Cdd:PHA03169 179 ---EPPTSEP----EPDSPGPPQSETPTSSPPPQSPPDEPG----------EPQSPT---PQQAPSPNTQQAVEHEDEPT 238
|
....*....
gi 861446033 1094 DMLRSGPRP 1102
Cdd:PHA03169 239 EPEREGPPF 247
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1449-1698 |
1.06e-74 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 249.11 E-value: 1.06e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 1449 SPPFEYFIMAMIALNTVVLMMKFYDAPYE-YELMLKCLNIVFTSMFSMECVLKIIAFGV-LNYFRDAWNVFDFVTVLGSI 1526
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEEpLTTVLEILDYVFTGIFTLEMLLKIIAAGFkKRYFRSPWNILDFVVVLPSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 1527 TDILVTEIaetNNFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIALD 1606
Cdd:pfam00520 81 ISLVLSSV---GSLSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKT 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 1607 DDTSINRHNNFRTFLQALMLLFRSATGEAWHEIMLSCLsnracdpnanaSECGSDFAYFYFVSFIFLCSFLMLNLFVAVI 1686
Cdd:pfam00520 158 WENPDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTI-----------DGKGEFWAYIYFVSFIILGGFLLLNLFIAVI 226
|
250
....*....|..
gi 861446033 1687 MDNFEYLTRDSS 1698
Cdd:pfam00520 227 IDNFQELTERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
94-367 |
6.00e-67 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 226.76 E-value: 6.00e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 94 WPPFEYMILATIIANCIVLALEQHLPDgdKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFVFHkgsYLRNGWNVMDFVV 173
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQP--EEPLTTVLEILDYVFTGIFTLEMLLKIIAAGFKKR---YFRSPWNILDFVV 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 174 VLTGIL----ATAGTDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYMGKF 249
Cdd:pfam00520 76 VLPSLIslvlSSVGSLSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 250 HKacfpnstdadpvgdfpcgkdaparlcegdtecreyWPGPNFGITNFDNILFAILTVFQCITMEGWTDILYNTNDAAGN 329
Cdd:pfam00520 156 KT-----------------------------------WENPDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKGE 200
|
250 260 270
....*....|....*....|....*....|....*...
gi 861446033 330 TWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVE 367
Cdd:pfam00520 201 FWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELTERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
481-720 |
1.72e-56 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 196.72 E-value: 1.72e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 481 AQSFYWVVLCVVALNTLCVAMVHYNQPQ-RLTTALYFAEFVFLGLFLTEMSLKMYGLGP-RSYFRSSFNCFDFGVIVGSI 558
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEePLTTVLEILDYVFTGIFTLEMLLKIIAAGFkKRYFRSPWNILDFVVVLPSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 559 FEVVWAAIKPGtsFGISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFK 638
Cdd:pfam00520 81 ISLVLSSVGSL--SGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKTW 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 639 DE--TPTTNFDTFPAAILTVFQILTGEDWNAVMYHGIESQGgvskGMFSSFYFIVLTLFGNYTLLNVFLAIAVDNLANAQ 716
Cdd:pfam00520 159 ENpdNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKG----EFWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELT 234
|
....
gi 861446033 717 ELTK 720
Cdd:pfam00520 235 ERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1129-1359 |
6.49e-55 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 192.10 E-value: 6.49e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 1129 RYFETVILVVIALSSIALAAEDPVRTDSSRNNALKYMDYIFTGVFTFEMVIKMIDLGLLLHpgaYFRDLWNILDFIVVSG 1208
Cdd:pfam00520 2 RYFELFILLLILLNTIFLALETYFQPEEPLTTVLEILDYVFTGIFTLEMLLKIIAAGFKKR---YFRSPWNILDFVVVLP 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 1209 ALVAFAFSGSKGkdINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKFf 1288
Cdd:pfam00520 79 SLISLVLSSVGS--LSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKL- 155
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 861446033 1289 yctdeskelerdcrgqyldyeKEEVEAQPRqwkkyDFHYDNVLWALLTLFTVSTGEGWPMVLKHSVDATYE 1359
Cdd:pfam00520 156 ---------------------KTWENPDNG-----RTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKGE 200
|
|
| Ca_chan_IQ |
pfam08763 |
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular ... |
1771-1848 |
1.36e-41 |
|
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular calcium entry in response to changes in membrane potential. The isoleucine-glutamine (IQ) motif in the voltage gated calcium channel IQ domain interacts with hydrophobic pockets of Ca2+/calmodulin. The interaction regulates two self-regulatory calcium dependent feedback mechanism, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF).
Pssm-ID: 462591 Cd Length: 77 Bit Score: 147.74 E-value: 1.36e-41
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 861446033 1771 TSTLMALIRTALEIKLAPAGtKQHQCDAELRKEISSVWANLPQKTLDLLVPPHKPDEMTVGKVYAALMIFDFYKQNKT 1848
Cdd:pfam08763 1 TATLFALIRTSLKIKLAPAG-EMDQADAELRKIIKKIWPRLSQKTLDLLVPPPSDDEMTVGKIYAALLIQDYYRQNKA 77
|
|
| GPHH |
pfam16905 |
Voltage-dependent L-type calcium channel, IQ-associated; GPHH is a sequence motif found in ... |
1707-1760 |
1.31e-31 |
|
Voltage-dependent L-type calcium channel, IQ-associated; GPHH is a sequence motif found in this short domain on voltage-dependent L-type calcium channel proteins in eukaryotes. The domain is closely associated with the IQ-domain, pfam08763.
Pssm-ID: 465306 Cd Length: 54 Bit Score: 118.14 E-value: 1.31e-31
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 861446033 1707 EFIRVWAEYDPAACGRISYNDMFEMLKHMSPPLGLGKKCPARVAYKRLVRMNMP 1760
Cdd:pfam16905 1 EFVRVWAEYDPAATGRISYQDMYELLRRISPPLGFGKKCPARVAYKRLVRMNMP 54
|
|
| Ca_chan_IQ |
smart01062 |
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular ... |
1826-1856 |
2.59e-10 |
|
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular calcium entry in response to changes in membrane potential. The isoleucine-glutamine (IQ) motif in the voltage gated calcium channel IQ domain interacts with hydrophobic pockets of Ca2+/calmodulin. The interaction regulates two self-regulatory calcium dependent feedback mechanism, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF).
Pssm-ID: 198130 Cd Length: 31 Bit Score: 57.23 E-value: 2.59e-10
10 20 30
....*....|....*....|....*....|.
gi 861446033 1826 DEMTVGKVYAALMIFDFYKQNKTTRDQIHQA 1856
Cdd:smart01062 1 DELTVGKIYAAMLIQDYFRQFKSRKEQELLG 31
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1963-2287 |
5.70e-07 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 55.33 E-value: 5.70e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 1963 DPDGEPQPGLQSQGRAASMPRLAAETQPAPdaSPMKRSISTLAQRPHG-AHLCSAALDRLAPGQVPHHHHHRCHRRRDKK 2041
Cdd:PHA03247 2546 DDAGDPPPPLPPAAPPAAPDRSVPPPRPAP--RPSEPAVTSRARRPDApPQSARPRAPVDDRGDPRGPAPPSPLPPDTHA 2623
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 2042 QKSLEKGPSLSADTDGAPSSTPGPGLA-PGEGPAGCRHERRQgRGRSQERRQPSSSSSEKQRfyscdrfgGREPPQPKPS 2120
Cdd:PHA03247 2624 PDPPPPSPSPAANEPDPHPPPTVPPPErPRDDPAPGRVSRPR-RARRLGRAAQASSPPQRPR--------RRAARPTVGS 2694
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 2121 VSSHPTSPTAGLEPAPAPQGGGSVTGSPLLSTS-------------------GASTPGRGGRRQLPQTPLTPRPSitykT 2181
Cdd:PHA03247 2695 LTSLADPPPPPPTPEPAPHALVSATPLPPGPAAarqaspalpaapappavpaGPATPGGPARPARPPTTAGPPAP----A 2770
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 2182 ANSSPVhfGGAQSSLSAfsPGRLSRGLSEHNALLQRDPLSQPLAPSSRIGSDPylgqrlDSEASAHALPEDTLTFEEAMA 2261
Cdd:PHA03247 2771 PPAAPA--AGPPRRLTR--PAVASLSESRESLPSPWDPADPPAAVLAPAAALP------PAASPAGPLPPPTSAQPTAPP 2840
|
330 340
....*....|....*....|....*.
gi 861446033 2262 SNSGRSSRTSYVSSLTSQSHPLRRVP 2287
Cdd:PHA03247 2841 PPPGPPPPSLPLGGSVAPGGDVRRRP 2866
|
|
| PHA03169 |
PHA03169 |
hypothetical protein; Provisional |
855-1102 |
2.22e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 223003 [Multi-domain] Cd Length: 413 Bit Score: 46.12 E-value: 2.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 855 KAPTTLPSASEQAQDQAGAQRADRMDGAEpgaRGEHARPRH-SRSKEATGGQEARGERSRGpeggrrhhrmhrhGPDPSK 933
Cdd:PHA03169 44 AKPAPPAPTTSGPQVRAVAEQGHRQTESD---TETAEESRHgEKEERGQGGPSGSGSESVG-------------SPTPSP 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 934 DKDKDGPVAKGERRARHRGPRAGPKEAESGEEPGrRHRARHKAPPTQEAMEKEGEGPEGDQEVRSRQLKDPPcdleargv 1013
Cdd:PHA03169 108 SGSAEELASGLSPENTSGSSPESPASHSPPPSPP-SHPGPHEPAPPESHNPSPNQQPSSFLQPSHEDSPEEP-------- 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 1014 mgvDPVHALPstclQKVEEQPEDADNQRNVTRMGSQPSDPStavhapvtltDPAGETtavPSGNVDLESQAEGKKEVEAD 1093
Cdd:PHA03169 179 ---EPPTSEP----EPDSPGPPQSETPTSSPPPQSPPDEPG----------EPQSPT---PQQAPSPNTQQAVEHEDEPT 238
|
....*....
gi 861446033 1094 DMLRSGPRP 1102
Cdd:PHA03169 239 EPEREGPPF 247
|
|
| AF-4 |
pfam05110 |
AF-4 proto-oncoprotein N-terminal region; This family consists of AF4 (Proto-oncogene AF4) and ... |
1963-2128 |
2.83e-03 |
|
AF-4 proto-oncoprotein N-terminal region; This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X E mental retardation syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental retardation. The family also contains a Drosophila AF4 protein homolog Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila.
Pssm-ID: 461550 [Multi-domain] Cd Length: 514 Bit Score: 42.80 E-value: 2.83e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 1963 DPDGEPQPGLQSQGRAASMPRLAAETQPAPDASPMKRSISTLaQRPHGAH--------LCSAALDRLAPGQvphhhhHRC 2034
Cdd:pfam05110 95 DKTSGLPPSFHTSSHSQPMGPPSSSSPSVSSSQSQKKSQART-EPAHGGHsssgsqssQRSQGQSRSKGGQ------ESH 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 2035 HRRRDKKQKSLEKGPSLSADTDGAPSSTPG-PGLAPGEGPAGCRHERRQGrgrsQERRQPSSSSSEKQRFYS---CDR-F 2109
Cdd:pfam05110 168 SSSHHKRQERREDLFSCASLSHSLEELSPLlSSLSSPVKPLSPSHSRQHT----GSKAQNSSDHHGKEYSHSkspRDSeA 243
|
170
....*....|....*....
gi 861446033 2110 GGREPPQPKPSVSSHPTSP 2128
Cdd:pfam05110 244 GSHGPESPSTSLLASSSQL 262
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1449-1698 |
1.06e-74 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 249.11 E-value: 1.06e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 1449 SPPFEYFIMAMIALNTVVLMMKFYDAPYE-YELMLKCLNIVFTSMFSMECVLKIIAFGV-LNYFRDAWNVFDFVTVLGSI 1526
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEEpLTTVLEILDYVFTGIFTLEMLLKIIAAGFkKRYFRSPWNILDFVVVLPSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 1527 TDILVTEIaetNNFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIALD 1606
Cdd:pfam00520 81 ISLVLSSV---GSLSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKT 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 1607 DDTSINRHNNFRTFLQALMLLFRSATGEAWHEIMLSCLsnracdpnanaSECGSDFAYFYFVSFIFLCSFLMLNLFVAVI 1686
Cdd:pfam00520 158 WENPDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTI-----------DGKGEFWAYIYFVSFIILGGFLLLNLFIAVI 226
|
250
....*....|..
gi 861446033 1687 MDNFEYLTRDSS 1698
Cdd:pfam00520 227 IDNFQELTERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
94-367 |
6.00e-67 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 226.76 E-value: 6.00e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 94 WPPFEYMILATIIANCIVLALEQHLPDgdKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFVFHkgsYLRNGWNVMDFVV 173
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQP--EEPLTTVLEILDYVFTGIFTLEMLLKIIAAGFKKR---YFRSPWNILDFVV 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 174 VLTGIL----ATAGTDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYMGKF 249
Cdd:pfam00520 76 VLPSLIslvlSSVGSLSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 250 HKacfpnstdadpvgdfpcgkdaparlcegdtecreyWPGPNFGITNFDNILFAILTVFQCITMEGWTDILYNTNDAAGN 329
Cdd:pfam00520 156 KT-----------------------------------WENPDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKGE 200
|
250 260 270
....*....|....*....|....*....|....*...
gi 861446033 330 TWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVE 367
Cdd:pfam00520 201 FWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELTERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
481-720 |
1.72e-56 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 196.72 E-value: 1.72e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 481 AQSFYWVVLCVVALNTLCVAMVHYNQPQ-RLTTALYFAEFVFLGLFLTEMSLKMYGLGP-RSYFRSSFNCFDFGVIVGSI 558
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEePLTTVLEILDYVFTGIFTLEMLLKIIAAGFkKRYFRSPWNILDFVVVLPSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 559 FEVVWAAIKPGtsFGISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFK 638
Cdd:pfam00520 81 ISLVLSSVGSL--SGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKTW 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 639 DE--TPTTNFDTFPAAILTVFQILTGEDWNAVMYHGIESQGgvskGMFSSFYFIVLTLFGNYTLLNVFLAIAVDNLANAQ 716
Cdd:pfam00520 159 ENpdNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKG----EFWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELT 234
|
....
gi 861446033 717 ELTK 720
Cdd:pfam00520 235 ERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1129-1359 |
6.49e-55 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 192.10 E-value: 6.49e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 1129 RYFETVILVVIALSSIALAAEDPVRTDSSRNNALKYMDYIFTGVFTFEMVIKMIDLGLLLHpgaYFRDLWNILDFIVVSG 1208
Cdd:pfam00520 2 RYFELFILLLILLNTIFLALETYFQPEEPLTTVLEILDYVFTGIFTLEMLLKIIAAGFKKR---YFRSPWNILDFVVVLP 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 1209 ALVAFAFSGSKGkdINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKFf 1288
Cdd:pfam00520 79 SLISLVLSSVGS--LSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKL- 155
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 861446033 1289 yctdeskelerdcrgqyldyeKEEVEAQPRqwkkyDFHYDNVLWALLTLFTVSTGEGWPMVLKHSVDATYE 1359
Cdd:pfam00520 156 ---------------------KTWENPDNG-----RTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKGE 200
|
|
| Ca_chan_IQ |
pfam08763 |
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular ... |
1771-1848 |
1.36e-41 |
|
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular calcium entry in response to changes in membrane potential. The isoleucine-glutamine (IQ) motif in the voltage gated calcium channel IQ domain interacts with hydrophobic pockets of Ca2+/calmodulin. The interaction regulates two self-regulatory calcium dependent feedback mechanism, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF).
Pssm-ID: 462591 Cd Length: 77 Bit Score: 147.74 E-value: 1.36e-41
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 861446033 1771 TSTLMALIRTALEIKLAPAGtKQHQCDAELRKEISSVWANLPQKTLDLLVPPHKPDEMTVGKVYAALMIFDFYKQNKT 1848
Cdd:pfam08763 1 TATLFALIRTSLKIKLAPAG-EMDQADAELRKIIKKIWPRLSQKTLDLLVPPPSDDEMTVGKIYAALLIQDYYRQNKA 77
|
|
| GPHH |
pfam16905 |
Voltage-dependent L-type calcium channel, IQ-associated; GPHH is a sequence motif found in ... |
1707-1760 |
1.31e-31 |
|
Voltage-dependent L-type calcium channel, IQ-associated; GPHH is a sequence motif found in this short domain on voltage-dependent L-type calcium channel proteins in eukaryotes. The domain is closely associated with the IQ-domain, pfam08763.
Pssm-ID: 465306 Cd Length: 54 Bit Score: 118.14 E-value: 1.31e-31
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 861446033 1707 EFIRVWAEYDPAACGRISYNDMFEMLKHMSPPLGLGKKCPARVAYKRLVRMNMP 1760
Cdd:pfam16905 1 EFVRVWAEYDPAATGRISYQDMYELLRRISPPLGFGKKCPARVAYKRLVRMNMP 54
|
|
| PKD_channel |
pfam08016 |
Polycystin cation channel; This family contains the cation channel region from group II of ... |
1472-1691 |
2.69e-11 |
|
Polycystin cation channel; This family contains the cation channel region from group II of Transient receptor potential (TRP) channels, the TRPP subfamily, including PKD1, PKD2, PKD2L and mucolipin proteins.
Pssm-ID: 462341 [Multi-domain] Cd Length: 225 Bit Score: 65.76 E-value: 2.69e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 1472 YDAPYEYELMLkCLNI--VFTSMFSMECVLKIIAFGvLNYFRDAWNVFDFVTVLGSIT--------DILVTE-----IAE 1536
Cdd:pfam08016 2 YVTNRSLFILL-CEIVfvVFFLYFVVEEILKIRKHR-PSYLRSVWNLLDLAIVILSVVlivlniyrDFLADRliksvEAS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 1537 TNNFIN--------------LSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGN 1602
Cdd:pfam08016 80 PVTFIDfdrvaqldnlyriiLAFLVFLTWLKLFKVLRFNKTMSLFTKTLSRAWKDLAGFALMFVIFFFAYAQFGYLLFGT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 1603 ialdddtsinRHNNFRTFLQALMLLFRsatgeawheIMLSCLSNRACDpnanasECGSDFAYFYFVSFIFLCSFLMLNLF 1682
Cdd:pfam08016 160 ----------QAPNFSNFVKSILTLFR---------TILGDFGYNEIF------SGNRVLGPLLFLTFVFLVIFILLNLF 214
|
....*....
gi 861446033 1683 VAVIMDNFE 1691
Cdd:pfam08016 215 LAIINDSYV 223
|
|
| Ca_chan_IQ |
smart01062 |
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular ... |
1826-1856 |
2.59e-10 |
|
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular calcium entry in response to changes in membrane potential. The isoleucine-glutamine (IQ) motif in the voltage gated calcium channel IQ domain interacts with hydrophobic pockets of Ca2+/calmodulin. The interaction regulates two self-regulatory calcium dependent feedback mechanism, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF).
Pssm-ID: 198130 Cd Length: 31 Bit Score: 57.23 E-value: 2.59e-10
10 20 30
....*....|....*....|....*....|.
gi 861446033 1826 DEMTVGKVYAALMIFDFYKQNKTTRDQIHQA 1856
Cdd:smart01062 1 DELTVGKIYAAMLIQDYFRQFKSRKEQELLG 31
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1963-2287 |
5.70e-07 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 55.33 E-value: 5.70e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 1963 DPDGEPQPGLQSQGRAASMPRLAAETQPAPdaSPMKRSISTLAQRPHG-AHLCSAALDRLAPGQVPHHHHHRCHRRRDKK 2041
Cdd:PHA03247 2546 DDAGDPPPPLPPAAPPAAPDRSVPPPRPAP--RPSEPAVTSRARRPDApPQSARPRAPVDDRGDPRGPAPPSPLPPDTHA 2623
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 2042 QKSLEKGPSLSADTDGAPSSTPGPGLA-PGEGPAGCRHERRQgRGRSQERRQPSSSSSEKQRfyscdrfgGREPPQPKPS 2120
Cdd:PHA03247 2624 PDPPPPSPSPAANEPDPHPPPTVPPPErPRDDPAPGRVSRPR-RARRLGRAAQASSPPQRPR--------RRAARPTVGS 2694
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 2121 VSSHPTSPTAGLEPAPAPQGGGSVTGSPLLSTS-------------------GASTPGRGGRRQLPQTPLTPRPSitykT 2181
Cdd:PHA03247 2695 LTSLADPPPPPPTPEPAPHALVSATPLPPGPAAarqaspalpaapappavpaGPATPGGPARPARPPTTAGPPAP----A 2770
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 2182 ANSSPVhfGGAQSSLSAfsPGRLSRGLSEHNALLQRDPLSQPLAPSSRIGSDPylgqrlDSEASAHALPEDTLTFEEAMA 2261
Cdd:PHA03247 2771 PPAAPA--AGPPRRLTR--PAVASLSESRESLPSPWDPADPPAAVLAPAAALP------PAASPAGPLPPPTSAQPTAPP 2840
|
330 340
....*....|....*....|....*.
gi 861446033 2262 SNSGRSSRTSYVSSLTSQSHPLRRVP 2287
Cdd:PHA03247 2841 PPPGPPPPSLPLGGSVAPGGDVRRRP 2866
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1932-2189 |
2.10e-06 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 53.25 E-value: 2.10e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 1932 APLERGHSAEIPVGQRGtLAVDVQMQSAALRDPD--GEPQPGLQSQGRAASMPRL--AAETQPAPDASPM-------KRS 2000
Cdd:PHA03307 155 AGASPAAVASDAASSRQ-AALPLSSPEETARAPSspPAEPPPSTPPAAASPRPPRrsSPISASASSPAPApgrsaadDAG 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 2001 ISTLAQRPHGAHLCSAALDRLAPGQVPHHHHHRCHRRRDK--KQKSLEKGPSLSADTDGAPSSTPGPGlAPGEGPA--GC 2076
Cdd:PHA03307 234 ASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASgwNGPSSRPGPASSSSSPRERSPSPSPS-SPGSGPApsSP 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 2077 RHERRQGRGRSQERRQPSSSS-SEKQRFYSCDRFGGREPPQPKPSVSSHPTSPTAGLEPAPAPQGGGSVTGSPLLSTSGA 2155
Cdd:PHA03307 313 RASSSSSSSRESSSSSTSSSSeSSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRARA 392
|
250 260 270
....*....|....*....|....*....|....
gi 861446033 2156 STPGRGGRRQLPQTPLTPRPSITYKTANSSPVHF 2189
Cdd:PHA03307 393 AVAGRARRRDATGRFPAGRPRPSPLDAGAASGAF 426
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1937-2303 |
6.38e-06 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 51.71 E-value: 6.38e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 1937 GHSAEIPV--GQRGTLAVDVQMQSAALRDPDGEPQPG-----LQSQGRAASMPRL--AAETQPAPDASPMKRSISTLAQR 2007
Cdd:PHA03307 38 GSQGQLVSdsAELAAVTVVAGAAACDRFEPPTGPPPGpgteaPANESRSTPTWSLstLAPASPAREGSPTPPGPSSPDPP 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 2008 PhgahlcsAALDRLAPGQVPHHHHHrchrrrdkkqkslEKGPSLSADTDGAPSSTPGPGLAPGEGPAGCRHERRQGRGRS 2087
Cdd:PHA03307 118 P-------PTPPPASPPPSPAPDLS-------------EMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLS 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 2088 Q-ERRQPSSSSSEKQRFYSCDRFGGREPPQPKPSVSSHPTSPtaglepaPAPQGGGSVTGSPLLSTSGASTPGRGGRRQL 2166
Cdd:PHA03307 178 SpEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASS-------PAPAPGRSAADDAGASSSDSSSSESSGCGWG 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 2167 PQTpLTPRPSITYKTANSSPVHFGGAQSSLSAFSPGRLSRGLSEHNALLQRDPLSQPLAPSSRIGSDPYLGQR---LDSE 2243
Cdd:PHA03307 251 PEN-ECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRessSSST 329
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 861446033 2244 ASAHALPEDTLTFEEAMASNSGRSSRTSYVS--SLTSQSHPLRRVPNGYHCTLGLSTGGRAR 2303
Cdd:PHA03307 330 SSSSESSRGAAVSPGPSPSRSPSPSRPPPPAdpSSPRKRPRPSRAPSSPAASAGRPTRRRAR 391
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1958-2256 |
8.79e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 51.48 E-value: 8.79e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 1958 SAALRDPDGEPQPGLQSQGRA---ASMPRLAAETQPAPDASPMKRSISTL--AQRPHGAHLCSAALDRLAPGQVPHHHhh 2032
Cdd:PHA03247 2769 PAPPAAPAAGPPRRLTRPAVAslsESRESLPSPWDPADPPAAVLAPAAALppAASPAGPLPPPTSAQPTAPPPPPGPP-- 2846
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 2033 rchrrrdkkQKSLEKGPSLSAdtdGAPSSTPGPGLAPGEGPAGCRHERRQGRGRSQERRQPSS---------------SS 2097
Cdd:PHA03247 2847 ---------PPSLPLGGSVAP---GGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESfalppdqperppqpqAP 2914
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 2098 SEKQRFYSCDRFGGREPPQPKPSVSSHPTSPTAGLEPAPAPQGGgsvTGSPLLstsGASTPGRGG--RRQLPQtpltPRP 2175
Cdd:PHA03247 2915 PPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGA---VPQPWL---GALVPGRVAvpRFRVPQ----PAP 2984
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 2176 SITYKTANSSPVHfggaQSSLSAFSPGRLSRGLSEhnallQRDP----LSQPLAPS---------SRIGSDPylgQRLDS 2242
Cdd:PHA03247 2985 SREAPASSTPPLT----GHSLSRVSSWASSLALHE-----ETDPppvsLKQTLWPPddtedsdadSLFDSDS---ERSDL 3052
|
330
....*....|....
gi 861446033 2243 EASAHALPEDTLTF 2256
Cdd:PHA03247 3053 EALDPLPPEPHDPF 3066
|
|
| PHA03169 |
PHA03169 |
hypothetical protein; Provisional |
855-1102 |
2.22e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 223003 [Multi-domain] Cd Length: 413 Bit Score: 46.12 E-value: 2.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 855 KAPTTLPSASEQAQDQAGAQRADRMDGAEpgaRGEHARPRH-SRSKEATGGQEARGERSRGpeggrrhhrmhrhGPDPSK 933
Cdd:PHA03169 44 AKPAPPAPTTSGPQVRAVAEQGHRQTESD---TETAEESRHgEKEERGQGGPSGSGSESVG-------------SPTPSP 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 934 DKDKDGPVAKGERRARHRGPRAGPKEAESGEEPGrRHRARHKAPPTQEAMEKEGEGPEGDQEVRSRQLKDPPcdleargv 1013
Cdd:PHA03169 108 SGSAEELASGLSPENTSGSSPESPASHSPPPSPP-SHPGPHEPAPPESHNPSPNQQPSSFLQPSHEDSPEEP-------- 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 1014 mgvDPVHALPstclQKVEEQPEDADNQRNVTRMGSQPSDPStavhapvtltDPAGETtavPSGNVDLESQAEGKKEVEAD 1093
Cdd:PHA03169 179 ---EPPTSEP----EPDSPGPPQSETPTSSPPPQSPPDEPG----------EPQSPT---PQQAPSPNTQQAVEHEDEPT 238
|
....*....
gi 861446033 1094 DMLRSGPRP 1102
Cdd:PHA03169 239 EPEREGPPF 247
|
|
| PRK12678 |
PRK12678 |
transcription termination factor Rho; Provisional |
821-1000 |
2.70e-04 |
|
transcription termination factor Rho; Provisional
Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 46.05 E-value: 2.70e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 821 SRDGPRGPTGGKAQSEATEAMDPPRRHHRHRDRDKAPTTLPSASEQAQDQAGAQRADRMDGAEPGARGEHARPRHSRSKE 900
Cdd:PRK12678 79 RAARAAAAARQAEQPAAEAAAAKAEAAPAARAAAAAAAEAASAPEAAQARERRERGEAARRGAARKAGEGGEQPATEARA 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 901 ATGGQEARGERSRGPEggrrhhrmhrhgpdpskdkDKDGPVAKGERRARHRGPRAGPKEAESGEEPGRRHRARHKApptq 980
Cdd:PRK12678 159 DAAERTEEEERDERRR-------------------RGDREDRQAEAERGERGRREERGRDGDDRDRRDRREQGDRR---- 215
|
170 180
....*....|....*....|
gi 861446033 981 eamEKEGEGPEGDQEVRSRQ 1000
Cdd:PRK12678 216 ---EERGRRDGGDRRGRRRR 232
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1958-2285 |
1.29e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 44.39 E-value: 1.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 1958 SAALRDPDGEPqpglqsqGRAASMPRLAAETQPAPDASPMKRSISTLAQRPHGAhlcsAALDRLAPGQVPHHHHHRCHRR 2037
Cdd:PHA03307 755 DALFSNPSLVP-------AKLAEALALLEPAEPQRGAGSSPPVRAEAAFRRPGR----LRRSGPAADAASRTASKRKSRS 823
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 2038 RDKKQKSLEKGPSLSAdtdGAPSSTPGPGLAPGEGPAGcrherRQGRGRSQERRQPSSSSSEKQRfyscdrfggREPPQP 2117
Cdd:PHA03307 824 HTPDGGSESSGPARPP---GAAARPPPARSSESSKSKP-----AAAGGRARGKNGRRRPRPPEPR---------ARPGAA 886
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 2118 KPSVSSHPTSPTAGLEPAPAPQGGGSVTGSPLlstsGASTPGRGGRRQLPQTPLTPRPSityktansspvhfggaQSSLS 2197
Cdd:PHA03307 887 APPKAAAAAPPAGAPAPRPRPAPRVKLGPMPP----GGPDPRGGFRRVPPGDLHTPAPS----------------AAALA 946
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 2198 AFSPGRLSRGLSEHnallqrdplsqPLAPssrigsdpylgqrldsEASAHAlpedtLTFE-EAMAS-----NSGRSSRTS 2271
Cdd:PHA03307 947 AYCPPEVVAELVDH-----------PLFP----------------EPWRPA-----LAFDpEALAEiaarcGGPPPRSGS 994
|
330
....*....|....
gi 861446033 2272 YVSSLTSqSHPLRR 2285
Cdd:PHA03307 995 AFGPLRA-SGPLRR 1007
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
737-979 |
1.68e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 44.01 E-value: 1.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 737 KAKEVAEVSPMSAANISIAAQQNSARARSVWEQRASQLRLQNLRASCEALYSemdPEERLRYATSRHLRPDMKTHLDRPL 816
Cdd:PHA03307 137 MLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSS---PPAEPPPSTPPAAASPRPPRRSSPI 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 817 VVEHSRDGPRGPTGGKAQSEATEAMDPPRRHHRHRDRDKAPTTLPSASEQAQDQAGAQradrmdgaepGARGEHARPRHS 896
Cdd:PHA03307 214 SASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWE----------ASGWNGPSSRPG 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 897 RSKEATGGQEARGE----RSRGPEGGRRHHRMHRHGPDPSKDKDKDGPVAKGER-------RARHRGPRAG-PKEAESGE 964
Cdd:PHA03307 284 PASSSSSPRERSPSpspsSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRgaavspgPSPSRSPSPSrPPPPADPS 363
|
250
....*....|....*
gi 861446033 965 EPGRRHRARHKAPPT 979
Cdd:PHA03307 364 SPRKRPRPSRAPSSP 378
|
|
| AF-4 |
pfam05110 |
AF-4 proto-oncoprotein N-terminal region; This family consists of AF4 (Proto-oncogene AF4) and ... |
1963-2128 |
2.83e-03 |
|
AF-4 proto-oncoprotein N-terminal region; This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X E mental retardation syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental retardation. The family also contains a Drosophila AF4 protein homolog Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila.
Pssm-ID: 461550 [Multi-domain] Cd Length: 514 Bit Score: 42.80 E-value: 2.83e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 1963 DPDGEPQPGLQSQGRAASMPRLAAETQPAPDASPMKRSISTLaQRPHGAH--------LCSAALDRLAPGQvphhhhHRC 2034
Cdd:pfam05110 95 DKTSGLPPSFHTSSHSQPMGPPSSSSPSVSSSQSQKKSQART-EPAHGGHsssgsqssQRSQGQSRSKGGQ------ESH 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 2035 HRRRDKKQKSLEKGPSLSADTDGAPSSTPG-PGLAPGEGPAGCRHERRQGrgrsQERRQPSSSSSEKQRFYS---CDR-F 2109
Cdd:pfam05110 168 SSSHHKRQERREDLFSCASLSHSLEELSPLlSSLSSPVKPLSPSHSRQHT----GSKAQNSSDHHGKEYSHSkspRDSeA 243
|
170
....*....|....*....
gi 861446033 2110 GGREPPQPKPSVSSHPTSP 2128
Cdd:pfam05110 244 GSHGPESPSTSLLASSSQL 262
|
|
| Hamartin |
pfam04388 |
Hamartin protein; This family includes the hamartin protein which is thought to function as a ... |
2039-2234 |
3.71e-03 |
|
Hamartin protein; This family includes the hamartin protein which is thought to function as a tumour suppressor. The hamartin protein interacts with the tuberin protein pfam03542. Tuberous sclerosis complex (TSC) is an autosomal dominant disorder and is characterized by the presence of hamartomas in many organs, such as brain, skin, heart, lung, and kidney. It is caused by mutation either TSC1 or TSC2 tumour suppressor gene. TSC1 encodes a protein, hamartin, containing two coiled-coil regions, which have been shown to mediate binding to tuberin. The TSC2 gene codes for tuberin pfam03542. These two proteins function within the same pathway(s) regulating cell cycle, cell growth, adhesion, and vesicular trafficking.
Pssm-ID: 461287 [Multi-domain] Cd Length: 730 Bit Score: 42.35 E-value: 3.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 2039 DKKQKSLEKGpSLSADTDgaPSSTPGPGLAPGEGPAGCRH---ERRQGRGRSQERRQPSSSSSEkqrfyscdRFGGREPP 2115
Cdd:pfam04388 259 DPKEASCEEG-YSSSAAD--PTASPYTDQQSSYGSSTSTPsstPRLQLSSSSGTSPPYLSPPSI--------RLKTDSFP 327
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 2116 QPKPSVSSH-PTSPTA-GLEPAPAPQGGGSvtgSPLLSTSGASTPGRGGRRQLPQTPLT-PRPSITYKTANSSPVHfgGA 2192
Cdd:pfam04388 328 LWSPSSVCGmTTPPTSpGMVPTTPSELSPS---SSHLSSRGSSPPEAAGEATPETTPAKdSPYLKQPPPLSDSHVH--RA 402
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 861446033 2193 QSSLSA-FSPGRLSRGLSEHNALLQRdplSQPLAPSSRIGSDP 2234
Cdd:pfam04388 403 LPASSQpSSPPRKDGRSQSSFPPLSK---QAPTNPNSRGLLEP 442
|
|
| PRK12678 |
PRK12678 |
transcription termination factor Rho; Provisional |
821-1000 |
8.34e-03 |
|
transcription termination factor Rho; Provisional
Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 41.43 E-value: 8.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 821 SRDGPRGPTGGKAQSEATEAMDPPRRHHRHRDRDKAPTTLPSASEQAQDQAGAQRADRMD-------GAEPGARGEHARP 893
Cdd:PRK12678 81 ARAAAAARQAEQPAAEAAAAKAEAAPAARAAAAAAAEAASAPEAAQARERRERGEAARRGaarkageGGEQPATEARADA 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 861446033 894 RHSRSKEATGGQEARGERS-RGPEGGRRHHRMHRHGPDPSKDKDKDGPVAKGERRARHRGPRAGPKEAESGEEPGRRHRA 972
Cdd:PRK12678 161 AERTEEEERDERRRRGDREdRQAEAERGERGRREERGRDGDDRDRRDRREQGDRREERGRRDGGDRRGRRRRRDRRDARG 240
|
170 180
....*....|....*....|....*...
gi 861446033 973 RHKAPPTQEAMEKEGEGPEGDQEVRSRQ 1000
Cdd:PRK12678 241 DDNREDRGDRDGDDGEGRGGRRGRRFRD 268
|
|
| |
