|
Name |
Accession |
Description |
Interval |
E-value |
| FAM193_C |
pfam15914 |
FAM193 family C-terminal; This domain family is found in eukaryotes, and is approximately 60 ... |
769-821 |
1.14e-25 |
|
FAM193 family C-terminal; This domain family is found in eukaryotes, and is approximately 60 amino acids in length. This C-terminal region of these proteins carries the most conserved residues. :
Pssm-ID: 464940 Cd Length: 57 Bit Score: 100.38 E-value: 1.14e-25
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 1046866189 769 DVFLPK--DLDGVEMDETDREVEYFKRFCLDSAKQTR-QKVAVNWTNFSLKKTAPS 821
Cdd:pfam15914 1 DVFLPKdiDLDDVEMDDTEREVEYFKRFCLDSAPQTRkQKVHVNWKDFSLKKKTTA 56
|
|
| PHA03247 super family |
cl33720 |
large tegument protein UL36; Provisional |
547-709 |
4.48e-04 |
|
large tegument protein UL36; Provisional The actual alignment was detected with superfamily member PHA03247:
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 44.16 E-value: 4.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046866189 547 PQSHTLQAPSEPVPPWAERRDPHPPwtevrGPPPAIPENGLVRRLNTVPNLSRVIWVKTPKPGKPSSEESPKE--VPICK 624
Cdd:PHA03247 2680 PQRPRRRAARPTVGSLTSLADPPPP-----PPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGpaTPGGP 2754
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046866189 625 QERSEPVATGGKPRKSKrqgSQAKKTEASPAPWPPANQEAPSAKSQMSSPKQPGKGPEPAKAGSAAEPGEGSRGSRPGPI 704
Cdd:PHA03247 2755 ARPARPPTTAGPPAPAP---PAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPP 2831
|
....*
gi 1046866189 705 QAASP 709
Cdd:PHA03247 2832 TSAQP 2836
|
|
| PHA03247 super family |
cl33720 |
large tegument protein UL36; Provisional |
175-239 |
3.49e-03 |
|
large tegument protein UL36; Provisional The actual alignment was detected with superfamily member PHA03247:
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 41.08 E-value: 3.49e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1046866189 175 SDLTAPPNSPTGPAPHPASLIPSHPGSFSSASHPHLLPTTPAAPFPAQASECPMAAATATHPPGP 239
Cdd:PHA03247 2696 TSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARP 2760
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| FAM193_C |
pfam15914 |
FAM193 family C-terminal; This domain family is found in eukaryotes, and is approximately 60 ... |
769-821 |
1.14e-25 |
|
FAM193 family C-terminal; This domain family is found in eukaryotes, and is approximately 60 amino acids in length. This C-terminal region of these proteins carries the most conserved residues.
Pssm-ID: 464940 Cd Length: 57 Bit Score: 100.38 E-value: 1.14e-25
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 1046866189 769 DVFLPK--DLDGVEMDETDREVEYFKRFCLDSAKQTR-QKVAVNWTNFSLKKTAPS 821
Cdd:pfam15914 1 DVFLPKdiDLDDVEMDDTEREVEYFKRFCLDSAPQTRkQKVHVNWKDFSLKKKTTA 56
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
547-709 |
4.48e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 44.16 E-value: 4.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046866189 547 PQSHTLQAPSEPVPPWAERRDPHPPwtevrGPPPAIPENGLVRRLNTVPNLSRVIWVKTPKPGKPSSEESPKE--VPICK 624
Cdd:PHA03247 2680 PQRPRRRAARPTVGSLTSLADPPPP-----PPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGpaTPGGP 2754
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046866189 625 QERSEPVATGGKPRKSKrqgSQAKKTEASPAPWPPANQEAPSAKSQMSSPKQPGKGPEPAKAGSAAEPGEGSRGSRPGPI 704
Cdd:PHA03247 2755 ARPARPPTTAGPPAPAP---PAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPP 2831
|
....*
gi 1046866189 705 QAASP 709
Cdd:PHA03247 2832 TSAQP 2836
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
496-711 |
1.00e-03 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 42.64 E-value: 1.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046866189 496 ASLNMCELGMDSSGFKEGTMEAQTLTPSDLSGSSQKQPDINLDLSPLTLGSPQSHTLqAPSEPVPPWAERRDPHPPW-TE 574
Cdd:pfam17823 224 AGTALAAVGNSSPAAGTVTAAVGTVTPAALATLAAAAGTVASAAGTINMGDPHARRL-SPAKHMPSDTMARNPAAPMgAQ 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046866189 575 VRGPPPAIPENGLVrrLNTVPNlsrviwvktPKPgKPSSEESPKEVPICKQERSEPVATGGKprkskrqgSQAKKTEASP 654
Cdd:pfam17823 303 AQGPIIQVSTDQPV--HNTAGE---------PTP-SPSNTTLEPNTPKSVASTNLAVVTTTK--------AQAKEPSASP 362
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1046866189 655 APWPPANQ----EAPSAKSQMSS--PKQPGKGP----EPAKAGSAAEPGEGSRGsrPGPIQAASPKT 711
Cdd:pfam17823 363 VPVLHTSMipevEATSPTTQPSPllPTQGAAGPgillAPEQVATEATAGTASAG--PTPRSSGDPKT 427
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
175-239 |
3.49e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 41.08 E-value: 3.49e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1046866189 175 SDLTAPPNSPTGPAPHPASLIPSHPGSFSSASHPHLLPTTPAAPFPAQASECPMAAATATHPPGP 239
Cdd:PHA03247 2696 TSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARP 2760
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
470-767 |
3.50e-03 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 40.91 E-value: 3.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046866189 470 QELDRVSSFLSSRLQEIKSTVKDSLCASLNMCELGMDSSGFKEGTMEAqtlTPSDLSGSSQKQPDINLDLSPLTLGSPQS 549
Cdd:NF033839 235 KELDELKKQALSEIDNVNTKVEIENTVHKIFADMDAVVTKFKKGLTQD---TPKEPGNKKPSAPKPGMQPSPQPEKKEVK 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046866189 550 HTLQAPSEPVPPWAERRDPHPPwTEVRGPPPAIPenglvrrlntvPNLSRVIWVKTPKPGKPSSEESPKEVPICKQERSE 629
Cdd:NF033839 312 PEPETPKPEVKPQLEKPKPEVK-PQPEKPKPEVK-----------PQLETPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQ 379
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046866189 630 PvatgGKPRKSKRQGSQAKKTEASPAPWPPANQEAPSAKSQMSSPKQPGKGPEPAKAGSAAEPGEGSRGSRPGPIQAASP 709
Cdd:NF033839 380 P----ETPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKP 455
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 1046866189 710 KTDKKGSSWQNWPGGARARTLEQESEQIPGPAKPQslSQGKGRSRRSRNKQEKSASSL 767
Cdd:NF033839 456 QPETPKPEVKPQPEKPKPEVKPQPEKPKPDNSKPQ--ADDKKPSTPNNLSKDKQPSNQ 511
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| FAM193_C |
pfam15914 |
FAM193 family C-terminal; This domain family is found in eukaryotes, and is approximately 60 ... |
769-821 |
1.14e-25 |
|
FAM193 family C-terminal; This domain family is found in eukaryotes, and is approximately 60 amino acids in length. This C-terminal region of these proteins carries the most conserved residues.
Pssm-ID: 464940 Cd Length: 57 Bit Score: 100.38 E-value: 1.14e-25
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 1046866189 769 DVFLPK--DLDGVEMDETDREVEYFKRFCLDSAKQTR-QKVAVNWTNFSLKKTAPS 821
Cdd:pfam15914 1 DVFLPKdiDLDDVEMDDTEREVEYFKRFCLDSAPQTRkQKVHVNWKDFSLKKKTTA 56
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
547-709 |
4.48e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 44.16 E-value: 4.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046866189 547 PQSHTLQAPSEPVPPWAERRDPHPPwtevrGPPPAIPENGLVRRLNTVPNLSRVIWVKTPKPGKPSSEESPKE--VPICK 624
Cdd:PHA03247 2680 PQRPRRRAARPTVGSLTSLADPPPP-----PPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGpaTPGGP 2754
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046866189 625 QERSEPVATGGKPRKSKrqgSQAKKTEASPAPWPPANQEAPSAKSQMSSPKQPGKGPEPAKAGSAAEPGEGSRGSRPGPI 704
Cdd:PHA03247 2755 ARPARPPTTAGPPAPAP---PAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPP 2831
|
....*
gi 1046866189 705 QAASP 709
Cdd:PHA03247 2832 TSAQP 2836
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
496-711 |
1.00e-03 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 42.64 E-value: 1.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046866189 496 ASLNMCELGMDSSGFKEGTMEAQTLTPSDLSGSSQKQPDINLDLSPLTLGSPQSHTLqAPSEPVPPWAERRDPHPPW-TE 574
Cdd:pfam17823 224 AGTALAAVGNSSPAAGTVTAAVGTVTPAALATLAAAAGTVASAAGTINMGDPHARRL-SPAKHMPSDTMARNPAAPMgAQ 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046866189 575 VRGPPPAIPENGLVrrLNTVPNlsrviwvktPKPgKPSSEESPKEVPICKQERSEPVATGGKprkskrqgSQAKKTEASP 654
Cdd:pfam17823 303 AQGPIIQVSTDQPV--HNTAGE---------PTP-SPSNTTLEPNTPKSVASTNLAVVTTTK--------AQAKEPSASP 362
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1046866189 655 APWPPANQ----EAPSAKSQMSS--PKQPGKGP----EPAKAGSAAEPGEGSRGsrPGPIQAASPKT 711
Cdd:pfam17823 363 VPVLHTSMipevEATSPTTQPSPllPTQGAAGPgillAPEQVATEATAGTASAG--PTPRSSGDPKT 427
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
537-749 |
1.14e-03 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 42.75 E-value: 1.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046866189 537 LDLSPLTLGSPQSHTLQAPSEPVPPWAE---RRDPHPPWTEVRGPPPAIPENGLVRRLNTVPNLSRVIWVKTPKPGKPSS 613
Cdd:PHA03378 572 LQIQPLTSPTTSQLASSAPSYAQTPWPVphpSQTPEPPTTQSHIPETSAPRQWPMPLRPIPMRPLRMQPITFNVLVFPTP 651
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046866189 614 EESPKEVPICKQersepvATGGKPRKSKRQGSQAKKTEASPAPWPPANQEAPSAKSQMSSPKQ--PGKGPEPAKAGSAAE 691
Cdd:PHA03378 652 HQPPQVEITPYK------PTWTQIGHIPYQPSPTGANTMLPIQWAPGTMQPPPRAPTPMRPPAapPGRAQRPAAATGRAR 725
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 1046866189 692 PGEGSRGSRPGPIQAASPKTDKKGSSWQNWPGGArARTLEQESEQIPGPAKPQSLSQG 749
Cdd:PHA03378 726 PPAAAPGRARPPAAAPGRARPPAAAPGRARPPAA-APGRARPPAAAPGAPTPQPPPQA 782
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
604-787 |
1.24e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 42.28 E-value: 1.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046866189 604 KTPKPGKPSSEESPKEVPICKQERSEPVATGGKPRKSKRQGSQAKKTEASPAPWPPANQEAPSAKSQMSSPKQPGKGPEp 683
Cdd:PRK07764 628 APAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPA- 706
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046866189 684 akAGSAAEPGEGSRGSRPGPIQAASPKTdkkgsswqnwPGGARARTLEQESEQIPGPAKPQSLSQGKGR-SRRSRNKQEK 762
Cdd:PRK07764 707 --ATPPAGQADDPAAQPPQAAQGASAPS----------PAADDPVPLPPEPDDPPDPAGAPAQPPPPPApAPAAAPAAAP 774
|
170 180
....*....|....*....|....*
gi 1046866189 763 SASSLDDVFLPKDLDGVEMDETDRE 787
Cdd:PRK07764 775 PPSPPSEEEEMAEDDAPSMDDEDRR 799
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
521-747 |
1.26e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 42.62 E-value: 1.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046866189 521 TPSDLSGSSQKQPdinldlsPLTLGSPQSHTLQAP-SEPVPPWAERRDPHPPWTEVRGPPPAIPENGLVRRLNTVPNLSR 599
Cdd:PHA03247 2600 APVDDRGDPRGPA-------PPSPLPPDTHAPDPPpPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGR 2672
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046866189 600 VIWVKTPkPGKPSSEESPKEV--------PICKQERSEPVATGGKPRKSKRQGSQAKKTEASPAPWPPANQEAPSAKSQM 671
Cdd:PHA03247 2673 AAQASSP-PQRPRRRAARPTVgsltsladPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATP 2751
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1046866189 672 SSPKQPGKGPEPAKAGSAAEPGEGSRGSRPG-PIQAASPKTDKKGSSWQNWPGGARARTLEQESEQIPGPAKPQSLS 747
Cdd:PHA03247 2752 GGPARPARPPTTAGPPAPAPPAAPAAGPPRRlTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPL 2828
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
175-239 |
3.49e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 41.08 E-value: 3.49e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1046866189 175 SDLTAPPNSPTGPAPHPASLIPSHPGSFSSASHPHLLPTTPAAPFPAQASECPMAAATATHPPGP 239
Cdd:PHA03247 2696 TSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARP 2760
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
470-767 |
3.50e-03 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 40.91 E-value: 3.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046866189 470 QELDRVSSFLSSRLQEIKSTVKDSLCASLNMCELGMDSSGFKEGTMEAqtlTPSDLSGSSQKQPDINLDLSPLTLGSPQS 549
Cdd:NF033839 235 KELDELKKQALSEIDNVNTKVEIENTVHKIFADMDAVVTKFKKGLTQD---TPKEPGNKKPSAPKPGMQPSPQPEKKEVK 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046866189 550 HTLQAPSEPVPPWAERRDPHPPwTEVRGPPPAIPenglvrrlntvPNLSRVIWVKTPKPGKPSSEESPKEVPICKQERSE 629
Cdd:NF033839 312 PEPETPKPEVKPQLEKPKPEVK-PQPEKPKPEVK-----------PQLETPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQ 379
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046866189 630 PvatgGKPRKSKRQGSQAKKTEASPAPWPPANQEAPSAKSQMSSPKQPGKGPEPAKAGSAAEPGEGSRGSRPGPIQAASP 709
Cdd:NF033839 380 P----ETPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKP 455
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 1046866189 710 KTDKKGSSWQNWPGGARARTLEQESEQIPGPAKPQslSQGKGRSRRSRNKQEKSASSL 767
Cdd:NF033839 456 QPETPKPEVKPQPEKPKPEVKPQPEKPKPDNSKPQ--ADDKKPSTPNNLSKDKQPSNQ 511
|
|
| PLN03237 |
PLN03237 |
DNA topoisomerase 2; Provisional |
604-788 |
3.59e-03 |
|
DNA topoisomerase 2; Provisional
Pssm-ID: 215641 [Multi-domain] Cd Length: 1465 Bit Score: 41.00 E-value: 3.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046866189 604 KTPKPGKP-------SSEESPKEVPICKQERSEPVATGGKPRKskRQGSQ----AKKTEASPAPWPPANQEAPSAKSQMS 672
Cdd:PLN03237 1200 QAPKKPAPkkttkkaSESETTEETYGSSAMETENVAEVVKPKG--RAGAKkkapAAAKEKEEEDEILDLKDRLAAYNLDS 1277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046866189 673 SPKQPGKGPEPAKAGSAAEPGEGSRGSRPGPIQAASPKTDKKGSswqnwPGGARARTLEQESEQIPGPAKPQSLSQGKGR 752
Cdd:PLN03237 1278 APAQSAKMEETVKAVPARRAAARKKPLASVSVISDSDDDDDDFA-----VEVSLAERLKKKGGRKPAAANKKAAKPPAAA 1352
|
170 180 190
....*....|....*....|....*....|....*.
gi 1046866189 753 SRRSRNKQEKSASSLDDVFLPKDLDGVEMDETDREV 788
Cdd:PLN03237 1353 KKRGPATVQSGQKLLTEMLKPAEAIGISPEKKVRKM 1388
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
632-777 |
4.56e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 40.74 E-value: 4.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046866189 632 ATGGKPRKSKRQGSQAKKTEASPAPW---PPANQEAPSAKSQMSSPKQPGKGPEPAKAGSAAEPGEGSRGS-RPGPIQAA 707
Cdd:PRK07764 597 GEGPPAPASSGPPEEAARPAAPAAPAapaAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDgWPAKAGGA 676
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046866189 708 SPKTDKKGSSWQNWPGGARARTLEQESEQIPGPAKPQSLSQGKGRSRRSRNKQEKSASSLDDVFLPKDLD 777
Cdd:PRK07764 677 APAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPD 746
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
540-757 |
7.64e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 40.15 E-value: 7.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046866189 540 SPLTLGSPQSHTLQAPSEPVPPWAER----RDPHPPW----TEVRGPPPAIPENGLVRRLNTVPNLSrviwvKTPKPGKP 611
Cdd:PHA03307 174 LPLSSPEETARAPSSPPAEPPPSTPPaaasPRPPRRSspisASASSPAPAPGRSAADDAGASSSDSS-----SSESSGCG 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046866189 612 SSEESPKEVP-----ICKQERSEPVATGGKPRKSKRQGSQAKKTEASPAPWPPANQEAPSAKSQMSSPKQPGKGPEPAKA 686
Cdd:PHA03307 249 WGPENECPLPrpapiTLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSS 328
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1046866189 687 GSAAEPGEGSRGSRPGPIQAASPkTDKKGSSWQNWPGGARARtleqeseqiPGPAKPQSLSQGKGRSRRSR 757
Cdd:PHA03307 329 TSSSSESSRGAAVSPGPSPSRSP-SPSRPPPPADPSSPRKRP---------RPSRAPSSPAASAGRPTRRR 389
|
|
| dnaA |
PRK14086 |
chromosomal replication initiator protein DnaA; |
554-743 |
8.72e-03 |
|
chromosomal replication initiator protein DnaA;
Pssm-ID: 237605 [Multi-domain] Cd Length: 617 Bit Score: 39.42 E-value: 8.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046866189 554 APSEPVPPWAERRDPHppwtevRGPPPAIPENGLVRRLNTVPNLSRVIWVKTPKPGKPSseespkevpicKQERSEPvat 633
Cdd:PRK14086 96 APPPPHARRTSEPELP------RPGRRPYEGYGGPRADDRPPGLPRQDQLPTARPAYPA-----------YQQRPEP--- 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046866189 634 GGKPRKSKRQGSQAKKTEASP-APWPPANQEAPSA----------KSQMSSPKQPGKGPEPAKAGSAAE--------PGE 694
Cdd:PRK14086 156 GAWPRAADDYGWQQQRLGFPPrAPYASPASYAPEQerdrepydagRPEYDQRRRDYDHPRPDWDRPRRDrtdrpeppPGA 235
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 1046866189 695 GS--RGSRPGPIQAASPKTDKKGSswqnWPGGARARtleqeSEQIPGPAKP 743
Cdd:PRK14086 236 GHvhRGGPGPPERDDAPVVPIRPS----APGPLAAQ-----PAPAPGPGEP 277
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
625-745 |
9.10e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 39.58 E-value: 9.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1046866189 625 QERSEPVATGGKPrkSKRQGSQAKKTEASPAPWPPANQEAPSAKSQMSSPKQPGKGPEPAKAgSAAEPGEGSRGSRPGPI 704
Cdd:PRK07764 381 LERRLGVAGGAGA--PAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPA-PPSPAGNAPAGGAPSPP 457
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 1046866189 705 QAASPKtdkkgSSWQNWPGGARARTLEQESEQIPGPAKPQS 745
Cdd:PRK07764 458 PAAAPS-----AQPAPAPAAAPEPTAAPAPAPPAAPAPAAA 493
|
|
|