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Conserved domains on  [gi|1958806205|ref|XP_038940860|]
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zinc finger protein 709-like isoform X3 [Rattus norvegicus]

Protein Classification

C2H2-type zinc finger protein( domain architecture ID 11472214)

Cys2His2 (C2H2)-type zinc finger protein may be involved in transcriptional regulation

CATH:  3.30.160.60
Gene Ontology:  GO:0008270|GO:0003677
PubMed:  11361095|22803940
SCOP:  4003583

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
181-567 5.02e-13

FOG: Zn-finger [General function prediction only];


:

Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 71.27  E-value: 5.02e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958806205 181 KPYECDWCGKAFIHCSHLQVHKRIHTGEKPYECNRCGKAFVCQN--DLKRHERIHTGEKPykcNECDKAFAHHRNFRTH- 257
Cdd:COG5048    32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYSGCDKSFSRplELSRHLRTHHNNPS---DLNSKSLPLSNSKASSs 108

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958806205 258 KMMHAGEKPYKCNQC-GKAFSQNSHLQTHKSTHTREELYKCKQCGKAFTCRNELQS------------------------ 312
Cdd:COG5048   109 SLSSSSSNSNDNNLLsSHSLPPSSRDPQLPDLLSISNLRNNPLPGNNSSSVNTPQSnslhpplpanslskdpssnlslli 188

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958806205 313 HKRIHTGEKSYECNQCGKAFKSHRYLQVHKTIHTGEKPYVCDQCGKAFAHHRTLRRH------EIIHTGRKSYKCNQCGK 386
Cdd:COG5048   189 SSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQSPsslsssDSSSSASESPRSSLPTA 268

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958806205 387 AFARQSHLKTHGITHTG-EKPYECDQCGKAFAYHSYLQVHKR--IHTGE--KPYVCD--QCGKAFAHRCHLQVHKRIHTG 459
Cdd:COG5048   269 SSQSSSPNESDSSSEKGfSLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPysLCGKLFSRNDALKRHILLHTS 348

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958806205 460 EKPYEC-------------DQCGKAFVCQNDLKKHKRTHTGEKpykcNECGKAFVCNASLRTHKVIHTGVKPYECK--HC 524
Cdd:COG5048   349 ISPAKEkllnssskfspllNNEPPQSLQQYKDLKNDKKSETLS----NSCIRNFKRDSNLSLHIITHLSFRPYNCKnpPC 424

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|...
gi 1958806205 525 GKAFVCQNDLKRHERIHTGVKPYECKQCGKaFSRSSHLQLHKR 567
Cdd:COG5048   425 SKSFNRHYNLIPHKKIHTNHAPLLCSILKS-FRRDLDLSNHGK 466
 
Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
181-567 5.02e-13

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 71.27  E-value: 5.02e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958806205 181 KPYECDWCGKAFIHCSHLQVHKRIHTGEKPYECNRCGKAFVCQN--DLKRHERIHTGEKPykcNECDKAFAHHRNFRTH- 257
Cdd:COG5048    32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYSGCDKSFSRplELSRHLRTHHNNPS---DLNSKSLPLSNSKASSs 108

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958806205 258 KMMHAGEKPYKCNQC-GKAFSQNSHLQTHKSTHTREELYKCKQCGKAFTCRNELQS------------------------ 312
Cdd:COG5048   109 SLSSSSSNSNDNNLLsSHSLPPSSRDPQLPDLLSISNLRNNPLPGNNSSSVNTPQSnslhpplpanslskdpssnlslli 188

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958806205 313 HKRIHTGEKSYECNQCGKAFKSHRYLQVHKTIHTGEKPYVCDQCGKAFAHHRTLRRH------EIIHTGRKSYKCNQCGK 386
Cdd:COG5048   189 SSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQSPsslsssDSSSSASESPRSSLPTA 268

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958806205 387 AFARQSHLKTHGITHTG-EKPYECDQCGKAFAYHSYLQVHKR--IHTGE--KPYVCD--QCGKAFAHRCHLQVHKRIHTG 459
Cdd:COG5048   269 SSQSSSPNESDSSSEKGfSLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPysLCGKLFSRNDALKRHILLHTS 348

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958806205 460 EKPYEC-------------DQCGKAFVCQNDLKKHKRTHTGEKpykcNECGKAFVCNASLRTHKVIHTGVKPYECK--HC 524
Cdd:COG5048   349 ISPAKEkllnssskfspllNNEPPQSLQQYKDLKNDKKSETLS----NSCIRNFKRDSNLSLHIITHLSFRPYNCKnpPC 424

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|...
gi 1958806205 525 GKAFVCQNDLKRHERIHTGVKPYECKQCGKaFSRSSHLQLHKR 567
Cdd:COG5048   425 SKSFNRHYNLIPHKKIHTNHAPLLCSILKS-FRRDLDLSNHGK 466
zf-H2C2_2 pfam13465
Zinc-finger double domain;
225-250 3.97e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 37.74  E-value: 3.97e-04
                          10        20
                  ....*....|....*....|....*.
gi 1958806205 225 DLKRHERIHTGEKPYKCNECDKAFAH 250
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
 
Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
181-567 5.02e-13

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 71.27  E-value: 5.02e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958806205 181 KPYECDWCGKAFIHCSHLQVHKRIHTGEKPYECNRCGKAFVCQN--DLKRHERIHTGEKPykcNECDKAFAHHRNFRTH- 257
Cdd:COG5048    32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYSGCDKSFSRplELSRHLRTHHNNPS---DLNSKSLPLSNSKASSs 108

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958806205 258 KMMHAGEKPYKCNQC-GKAFSQNSHLQTHKSTHTREELYKCKQCGKAFTCRNELQS------------------------ 312
Cdd:COG5048   109 SLSSSSSNSNDNNLLsSHSLPPSSRDPQLPDLLSISNLRNNPLPGNNSSSVNTPQSnslhpplpanslskdpssnlslli 188

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958806205 313 HKRIHTGEKSYECNQCGKAFKSHRYLQVHKTIHTGEKPYVCDQCGKAFAHHRTLRRH------EIIHTGRKSYKCNQCGK 386
Cdd:COG5048   189 SSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQSPsslsssDSSSSASESPRSSLPTA 268

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958806205 387 AFARQSHLKTHGITHTG-EKPYECDQCGKAFAYHSYLQVHKR--IHTGE--KPYVCD--QCGKAFAHRCHLQVHKRIHTG 459
Cdd:COG5048   269 SSQSSSPNESDSSSEKGfSLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPysLCGKLFSRNDALKRHILLHTS 348

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958806205 460 EKPYEC-------------DQCGKAFVCQNDLKKHKRTHTGEKpykcNECGKAFVCNASLRTHKVIHTGVKPYECK--HC 524
Cdd:COG5048   349 ISPAKEkllnssskfspllNNEPPQSLQQYKDLKNDKKSETLS----NSCIRNFKRDSNLSLHIITHLSFRPYNCKnpPC 424

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|...
gi 1958806205 525 GKAFVCQNDLKRHERIHTGVKPYECKQCGKaFSRSSHLQLHKR 567
Cdd:COG5048   425 SKSFNRHYNLIPHKKIHTNHAPLLCSILKS-FRRDLDLSNHGK 466
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
125-511 5.33e-11

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 65.10  E-value: 5.33e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958806205 125 KSYKCNQCGKAFARLSHLKTHGITHTGEKPYKCDQCGKAFAY----------------HSYLQVHKRIHTGEKPYECDWC 188
Cdd:COG5048    32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYSGCDKSFsrplelsrhlrthhnnPSDLNSKSLPLSNSKASSSSLS 111

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958806205 189 GKAFIHCSHLQVHKRIHTGEKPY------------------ECNRCGKAFVCQNDLK-RHERIHTGEKPYKcnecdkafa 249
Cdd:COG5048   112 SSSSNSNDNNLLSSHSLPPSSRDpqlpdllsisnlrnnplpGNNSSSVNTPQSNSLHpPLPANSLSKDPSS--------- 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958806205 250 hHRNFRTHKMMHAGEKPYKCNQCGKAFSQNSHLQTHKSTHTREELYKCKQCGKAFTCRNELQSHKRI------HTGEKSY 323
Cdd:COG5048   183 -NLSLLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQSPSSLsssdssSSASESP 261

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958806205 324 ECNQCGKAFKSHRYLQVHKTIHTG-EKPYVCDQCGKAFAHHRTLRRH--EIIHTG--RKSYKC--NQCGKAFARQSHLKT 396
Cdd:COG5048   262 RSSLPTASSQSSSPNESDSSSEKGfSLPIKSKQCNISFSRSSPLTRHlrSVNHSGesLKPFSCpySLCGKLFSRNDALKR 341

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958806205 397 HGITHTGEKPYEC--DQCGKAF------AYHSYLQVHKRIHTgEKPYVCD--QCGKAFAHRCHLQVHKRIHTGEKPYECD 466
Cdd:COG5048   342 HILLHTSISPAKEklLNSSSKFspllnnEPPQSLQQYKDLKN-DKKSETLsnSCIRNFKRDSNLSLHIITHLSFRPYNCK 420

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*..
gi 1958806205 467 --QCGKAFVCQNDLKKHKRTHTGEKPYKCNECGKAFVCNASLRTHKV 511
Cdd:COG5048   421 npPCSKSFNRHYNLIPHKKIHTNHAPLLCSILKSFRRDLDLSNHGKD 467
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
41-445 6.52e-11

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 64.72  E-value: 6.52e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958806205  41 KPSENTQCGKTFAQHSHLQRHKSTHTGEKLCEC--KPRDKAFTYDSQLQNLERIHTGEKPYKCNQCGKAFerrcnlgrhk 118
Cdd:COG5048    32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCsySGCDKSFSRPLELSRHLRTHHNNPSDLNSKSLPLS---------- 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958806205 119 iiHTGRKSYKCNQCGKAFARLSHLKTHGITHTGEKPYKCDQCGKAFAYHSYLQVHKRIHTGEK-------PYECDWCGKA 191
Cdd:COG5048   102 --NSKASSSSLSSSSSNSNDNNLLSSHSLPPSSRDPQLPDLLSISNLRNNPLPGNNSSSVNTPqsnslhpPLPANSLSKD 179

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958806205 192 FIHCSHLQVHKRIHTGEKPYECNRCGKAFVCQNDLKRHERIHTGEKPYKCNECDKAFAHH--RNFRTHKMMHA----GEK 265
Cdd:COG5048   180 PSSNLSLLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSllSQSPSSLSSSDssssASE 259

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958806205 266 PYKCNQCGKAFSQNSHLQTHKSTHTREEL-YKCKQCGKAFTCRNELQSHKR--IHTGEKSYEC----NQCGKAFKSHRYL 338
Cdd:COG5048   260 SPRSSLPTASSQSSSPNESDSSSEKGFSLpIKSKQCNISFSRSSPLTRHLRsvNHSGESLKPFscpySLCGKLFSRNDAL 339

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958806205 339 QVHKTIHTGEKPYVC--DQCGKAF------AHHRTLRRHEIIHTGRKSYKC-NQCGKAFARQSHLKTHGITHTGEKPYEC 409
Cdd:COG5048   340 KRHILLHTSISPAKEklLNSSSKFspllnnEPPQSLQQYKDLKNDKKSETLsNSCIRNFKRDSNLSLHIITHLSFRPYNC 419

                         410       420       430
                  ....*....|....*....|....*....|....*...
gi 1958806205 410 D--QCGKAFAYHSYLQVHKRIHTGEKPYVCDQCGKAFA 445
Cdd:COG5048   420 KnpPCSKSFNRHYNLIPHKKIHTNHAPLLCSILKSFRR 457
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
97-538 8.27e-11

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 64.33  E-value: 8.27e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958806205  97 KPYKCNQCGKAFERRCNLGRHKIIHTGRKSYKCNQ--CGKAFARLSHLKTHGITHTGEKPYKCDQCGKafAYHSYLQVHK 174
Cdd:COG5048    32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYsgCDKSFSRPLELSRHLRTHHNNPSDLNSKSLP--LSNSKASSSS 109

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958806205 175 RIHTGEKPYECDWCgkAFIHCSHLQVHKRIHTGEKPYE--------CNRCGKAFVCQNDLK-RHERIHTGEKPYKcnecd 245
Cdd:COG5048   110 LSSSSSNSNDNNLL--SSHSLPPSSRDPQLPDLLSISNlrnnplpgNNSSSVNTPQSNSLHpPLPANSLSKDPSS----- 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958806205 246 kafahHRNFRTHKMMHAGEKPYKCNQCGKAFSQNSHLQTHKSTHTREELYKCKQCGKAFTCRNELQSHKRI------HTG 319
Cdd:COG5048   183 -----NLSLLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQSPSSLsssdssSSA 257

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958806205 320 EKSYECNQCGKAFKSHRYLQVHKTIHTG-EKPYVCDQCGKAFAHHRTLRRH--EIIHTG--RKSYKC--NQCGKAFARQS 392
Cdd:COG5048   258 SESPRSSLPTASSQSSSPNESDSSSEKGfSLPIKSKQCNISFSRSSPLTRHlrSVNHSGesLKPFSCpySLCGKLFSRND 337

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958806205 393 HLKTHGITHTGEKPYECdqcgkafayhsYLQVHKRIHTGEKPYvcdqcgkafAHRCHLQVHKRIHTgEKPYECD--QCGK 470
Cdd:COG5048   338 ALKRHILLHTSISPAKE-----------KLLNSSSKFSPLLNN---------EPPQSLQQYKDLKN-DKKSETLsnSCIR 396

                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958806205 471 AFVCQNDLKKHKRTHTGEKP--YKCNECGKAFVCNASLRTHKVIHTGVKPYECKHCGKAFVCQNDLKRHE 538
Cdd:COG5048   397 NFKRDSNLSLHIITHLSFRPynCKNPPCSKSFNRHYNLIPHKKIHTNHAPLLCSILKSFRRDLDLSNHGK 466
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
265-570 4.69e-09

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 58.94  E-value: 4.69e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958806205 265 KPYKCNQCGKAFSQNSHLQTHKSTHTREELYKCKQCGKAFTCRN--ELQSHKRIHTGEKSYECNQCGKAFKS-HRYLQVH 341
Cdd:COG5048    32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYSGCDKSFSRplELSRHLRTHHNNPSDLNSKSLPLSNSkASSSSLS 111

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958806205 342 KTIHTGEKPYVCDQCGKAFAHHRTLRRHEIIHTGRKSYKCNQC-GKAFARQSHLKTHGITHTGEKPyecdqcgKAFAYHS 420
Cdd:COG5048   112 SSSSNSNDNNLLSSHSLPPSSRDPQLPDLLSISNLRNNPLPGNnSSSVNTPQSNSLHPPLPANSLS-------KDPSSNL 184

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958806205 421 YLQVHKRIHTGEKPYVCDQCGKAFAHRCHLQVHKRIHTGEKPYECDQCGKAFVCQNDLKKHKRTHTGEKPYKCNECGKAF 500
Cdd:COG5048   185 SLLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQSPSSLSSSDSSSSASESPRSS 264

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958806205 501 VCNASLRTHKVIHTGV-------KPYECKHCGKAFVCQNDLKRHER--IHTG--VKPYEC--KQCGKAFSRSSHLQLHKR 567
Cdd:COG5048   265 LPTASSQSSSPNESDSssekgfsLPIKSKQCNISFSRSSPLTRHLRsvNHSGesLKPFSCpySLCGKLFSRNDALKRHIL 344


                  ...
gi 1958806205 568 THT 570
Cdd:COG5048   345 LHT 347
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 459-537 1.50e-04

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 44.32  E-value: 1.50e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958806205 459 GEKPYECD--QCGKAFVCQNDLKKHKrthtgekpyKCNECGKAFVCNASLRTHKVIHTGVKPYECKHCGKAFVCQNDLKR 536
Cdd:COG5189   346 DGKPYKCPveGCNKKYKNQNGLKYHM---------LHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKY 416


                  .
gi 1958806205 537 H 537
Cdd:COG5189   417 H 417
zf-H2C2_2 pfam13465
Zinc-finger double domain;
225-250 3.97e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 37.74  E-value: 3.97e-04
                          10        20
                  ....*....|....*....|....*.
gi 1958806205 225 DLKRHERIHTGEKPYKCNECDKAFAH 250
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 207-290 8.47e-04

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 42.01  E-value: 8.47e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958806205 207 GEKPYECN--RCGKAFVCQNDLKRHeRIHTGEKPYKCNECDKAfahhrnfrTHKMMHAGEKPYKCNQCGKAFSQNSHLQT 284
Cdd:COG5189   346 DGKPYKCPveGCNKKYKNQNGLKYH-MLHGHQNQKLHENPSPE--------KMNIFSAKDKPYRCEVCDKRYKNLNGLKY 416


                  ....*.
gi 1958806205 285 HKSTHT 290
Cdd:COG5189   417 HRKHSH 422
zf-H2C2_2 pfam13465
Zinc-finger double domain;
477-502 9.51e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.58  E-value: 9.51e-04
                          10        20
                  ....*....|....*....|....*.
gi 1958806205 477 DLKKHKRTHTGEKPYKCNECGKAFVC 502
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
449-474 1.42e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.20  E-value: 1.42e-03
                          10        20
                  ....*....|....*....|....*.
gi 1958806205 449 HLQVHKRIHTGEKPYECDQCGKAFVC 474
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
533-558 1.55e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.20  E-value: 1.55e-03
                          10        20
                  ....*....|....*....|....*.
gi 1958806205 533 DLKRHERIHTGVKPYECKQCGKAFSR 558
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
421-446 3.03e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.42  E-value: 3.03e-03
                          10        20
                  ....*....|....*....|....*.
gi 1958806205 421 YLQVHKRIHTGEKPYVCDQCGKAFAH 446
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 225-343 3.52e-03

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 40.09  E-value: 3.52e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958806205 225 DLKRHERIHTGEKPYKCNECDKAFAH--HRNFRTHKMMH--AGEKPYKCN--QCGKAFSQNSHLQTHKsthtreelyKCK 298
Cdd:COG5189   304 GISTGEMIDVRKLPCTNSSSNGKLAHggERNIDTPSRMLkvKDGKPYKCPveGCNKKYKNQNGLKYHM---------LHG 374

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 1958806205 299 QCGKAFTCRNELQSHKRIHTGEKSYECNQCGKAFKSHRYLQVHKT 343
Cdd:COG5189   375 HQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK 419
zf-H2C2_2 pfam13465
Zinc-finger double domain;
309-334 4.32e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.04  E-value: 4.32e-03
                          10        20
                  ....*....|....*....|....*.
gi 1958806205 309 ELQSHKRIHTGEKSYECNQCGKAFKS 334
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 487-571 6.81e-03

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 38.93  E-value: 6.81e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958806205 487 GEKPYKCN--ECGKAFVCNASLRTHKvIHtgvkpyecKHCGKAFVCQNDLKRHERIHTGVKPYECKQCGKAFSRSSHLQL 564
Cdd:COG5189   346 DGKPYKCPveGCNKKYKNQNGLKYHM-LH--------GHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKY 416


                  ....*..
gi 1958806205 565 HkRTHTY 571
Cdd:COG5189   417 H-RKHSH 422
zf-H2C2_2 pfam13465
Zinc-finger double domain;
197-222 8.18e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 34.27  E-value: 8.18e-03
                          10        20
                  ....*....|....*....|....*.
gi 1958806205 197 HLQVHKRIHTGEKPYECNRCGKAFVC 222
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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