doublesex- and mab-3-related transcription factor C2 isoform X3 [Rattus norvegicus]
DM domain-containing protein; doublesex- and mab-3-related transcription factor family protein( domain architecture ID 11107823)
DM (doublesex- and mab-3) domain-containing protein may dimerize and bind palindromic DNA; similar to Caenorhabditis elegans protein male abnormal 3 and doublesex- and mab-3-related transcription factor dmd-10; doublesex- and mab-3-related transcription factor (DMRT) family protein similar to human DMRT2, also called doublesex-like 2 protein, a transcriptional activator that directly regulates early activation of the myogenic determination gene MYF5 by binding in a sequence-specific manner to its early epaxial enhancer element
List of domain hits
Name | Accession | Description | Interval | E-value | |||
DMRT-like | pfam15791 | Doublesex-and mab-3-related transcription factor C1 and C2; DMRT-like is a C-terminal domain ... |
242-369 | 9.49e-41 | |||
Doublesex-and mab-3-related transcription factor C1 and C2; DMRT-like is a C-terminal domain found on eukaryotic proteins for doublesex-and mab-3-related transcription factors C1 and C2. This is not the DM DNA-binding region. The family is all disorder and low-complexity. : Pssm-ID: 464871 Cd Length: 119 Bit Score: 139.55 E-value: 9.49e-41
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DM | pfam00751 | DM DNA binding domain; The DM domain is named after dsx and mab-3. dsx contains a single ... |
38-84 | 5.31e-24 | |||
DM DNA binding domain; The DM domain is named after dsx and mab-3. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4. The dsx DM domain has been shown to dimerize and bind palindromic DNA. : Pssm-ID: 459924 Cd Length: 47 Bit Score: 93.11 E-value: 5.31e-24
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Name | Accession | Description | Interval | E-value | |||
DMRT-like | pfam15791 | Doublesex-and mab-3-related transcription factor C1 and C2; DMRT-like is a C-terminal domain ... |
242-369 | 9.49e-41 | |||
Doublesex-and mab-3-related transcription factor C1 and C2; DMRT-like is a C-terminal domain found on eukaryotic proteins for doublesex-and mab-3-related transcription factors C1 and C2. This is not the DM DNA-binding region. The family is all disorder and low-complexity. Pssm-ID: 464871 Cd Length: 119 Bit Score: 139.55 E-value: 9.49e-41
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DM | pfam00751 | DM DNA binding domain; The DM domain is named after dsx and mab-3. dsx contains a single ... |
38-84 | 5.31e-24 | |||
DM DNA binding domain; The DM domain is named after dsx and mab-3. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4. The dsx DM domain has been shown to dimerize and bind palindromic DNA. Pssm-ID: 459924 Cd Length: 47 Bit Score: 93.11 E-value: 5.31e-24
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DM | smart00301 | Doublesex DNA-binding motif; |
38-91 | 6.10e-19 | |||
Doublesex DNA-binding motif; Pssm-ID: 214606 Cd Length: 54 Bit Score: 79.33 E-value: 6.10e-19
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Name | Accession | Description | Interval | E-value | |||
DMRT-like | pfam15791 | Doublesex-and mab-3-related transcription factor C1 and C2; DMRT-like is a C-terminal domain ... |
242-369 | 9.49e-41 | |||
Doublesex-and mab-3-related transcription factor C1 and C2; DMRT-like is a C-terminal domain found on eukaryotic proteins for doublesex-and mab-3-related transcription factors C1 and C2. This is not the DM DNA-binding region. The family is all disorder and low-complexity. Pssm-ID: 464871 Cd Length: 119 Bit Score: 139.55 E-value: 9.49e-41
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DM | pfam00751 | DM DNA binding domain; The DM domain is named after dsx and mab-3. dsx contains a single ... |
38-84 | 5.31e-24 | |||
DM DNA binding domain; The DM domain is named after dsx and mab-3. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4. The dsx DM domain has been shown to dimerize and bind palindromic DNA. Pssm-ID: 459924 Cd Length: 47 Bit Score: 93.11 E-value: 5.31e-24
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DM | smart00301 | Doublesex DNA-binding motif; |
38-91 | 6.10e-19 | |||
Doublesex DNA-binding motif; Pssm-ID: 214606 Cd Length: 54 Bit Score: 79.33 E-value: 6.10e-19
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Blast search parameters | ||||
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