|
Name |
Accession |
Description |
Interval |
E-value |
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
358-897 |
1.65e-14 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 79.60 E-value: 1.65e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 358 SEKTPETAQSVL-IPESELLLSSLAPKGSP--------EFPEAKTAFPSEKPGGS-------LASSEEPWVVPGAKTSEd 421
Cdd:PHA03247 2449 ADGDPFFARTILgAPFSLSLLLGELFPGAPvyrrpaeaRFPFAAGAAPDPGGGGPpdpdappAPSRLAPAILPDEPVGE- 2527
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 422 srVVQPRTATYDVVSSSATSDETEVEPHTATSDPIldsvPPKTSRTAEQPRATLAPSEASFDPRTveifTSPEVRPTTAA 501
Cdd:PHA03247 2528 --PVHPRMLTWIRGLEELASDDAGDPPPPLPPAAP----PAAPDRSVPPPRPAPRPSEPAVTSRA----RRPDAPPQSAR 2597
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 502 PQQTTSIPSTPKR--QSTPKPPRVKPAPEPETRPSAQSTKAP------------PHKTKKPGR-RRPKTTRSPEVPKS-- 564
Cdd:PHA03247 2598 PRAPVDDRGDPRGpaPPSPLPPDTHAPDPPPPSPSPAANEPDphppptvppperPRDDPAPGRvSRPRRARRLGRAAQas 2677
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 565 -------KPALEPATVP------PEILVPTIVPKPPQRPKATRRPEAPQIQPAHEPVTFGSEAPALAIVTTTDIAPVISR 631
Cdd:PHA03247 2678 sppqrprRRAARPTVGSltsladPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARP 2757
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 632 TKASVTTLAPKSSRPRTRQRPKYKATPSPKIPQTKPDLGPITAEPSLASTTKKVRRPRPkpkTTPHPEVPQTILVPATSL 711
Cdd:PHA03247 2758 ARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAA---ALPPAASPAGPLPPPTSA 2834
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 712 EPVIRTETPG---TTLVPKLSQQPDFPHPKPKTTRSPAAPPTElvsttvfEPVIPLKEDPVTTIVPFTDLEPATDLETPV 788
Cdd:PHA03247 2835 QPTAPPPPPGpppPSLPLGGSVAPGGDVRRRPPSRSPAAKPAA-------PARPPVRRLARPAVSRSTESFALPPDQPER 2907
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 789 AFRTEAPRTTLASKKSQRTRRPRPRPPKATLSPQAPKTKTVPAVVLEPVTLRPEVQVTTLAPKKTQIKHRPRPKPKPIPS 868
Cdd:PHA03247 2908 PPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSRE 2987
|
570 580
....*....|....*....|....*....
gi 1958666954 869 pevAESKPVPTKEREPVTlRTESWVTTKA 897
Cdd:PHA03247 2988 ---APASSTPPLTGHSLS-RVSSWASSLA 3012
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1359-1450 |
3.57e-10 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 58.28 E-value: 3.57e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 1359 NPPTNLTVVTVEgcPSFVILDWEKPLNDT--VTEYEVISRENGSFSGKNKSIQITNQTFSTVENLKPDTSYEFQVKPKNP 1436
Cdd:cd00063 2 SPPTNLRVTDVT--STSVTLSWTPPEDDGgpITGYVVEYREKGSGDWKEVEVTPGSETSYTLTGLKPGTEYEFRVRAVNG 79
|
90
....*....|....
gi 1958666954 1437 LGEGPASNTVAFST 1450
Cdd:cd00063 80 GGESPPSESVTVTT 93
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
707-1321 |
7.63e-08 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 57.64 E-value: 7.63e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 707 PATSLEPVIRTETPGttlvPKLSQQPDFPHPKPKTTRSPAAPPTElvstTVFEPVIP--------LKE-------DPvTT 771
Cdd:PHA03247 2483 PAEARFPFAAGAAPD----PGGGGPPDPDAPPAPSRLAPAILPDE----PVGEPVHPrmltwirgLEElasddagDP-PP 2553
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 772 IVPFTDLEPATDLETPVAfrTEAPRTT---LASKKSQRTRRPRPRPPKATLSPQAPKTKTVPAVVLEPVTLRPEVQVTTL 848
Cdd:PHA03247 2554 PLPPAAPPAAPDRSVPPP--RPAPRPSepaVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSP 2631
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 849 APKKTQikhRPRPKPKPIPSPEVAESKPVPTKEREPvtLRTESWVTTKAPKTPKRTHRVRPKPKTTTPEAPLTKPvaaTD 928
Cdd:PHA03247 2632 SPAANE---PDPHPPPTVPPPERPRDDPAPGRVSRP--RRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADP---PP 2703
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 929 LESSALSTEVPTTVVLTTALVPATLRTKSPKTTLAPSVQRTRRPRPRPKTTARTdvsesksvsddlelvafstESPQKTI 1008
Cdd:PHA03247 2704 PPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARP-------------------ARPPTTA 2764
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 1009 APRQTTSP--PPKLKPPHSRRPAkeqVPKGSLHTTSKPKMP-PSPEVVDITSVPKDEQLSHKPDPEVSQSETVLPPVTFR 1085
Cdd:PHA03247 2765 GPPAPAPPaaPAAGPPRRLTRPA---VASLSESRESLPSPWdPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPP 2841
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 1086 VEPPKTTIVPLETRDIPLIPVISPRPSEEELQTTMEQTDQSTQELFTTKIPRTTE---LAKTTQAPHRLHTTPVRPRIPE 1162
Cdd:PHA03247 2842 PPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTEsfaLPPDQPERPPQPQAPPPPQPQP 2921
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 1163 RPHGRPALNKTTTRPDRTKSRgmshkngVGPGTKQTPKPSSTGRNTSVDSHATrKPGLIPGTRHRHTSPRP-VPPQRKPL 1241
Cdd:PHA03247 2922 QPPPPPQPQPPPPPPPRPQPP-------LAPTTDPAGAGEPSGAVPQPWLGAL-VPGRVAVPRFRVPQPAPsREAPASST 2993
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 1242 PPNNVTGKPGSAGIISS----SRATSPP--LKATLKPTGTATerpgaEKKQPTAPASEEEFGNTTDFSSSPTKETDPLGK 1315
Cdd:PHA03247 2994 PPLTGHSLSRVSSWASSlalhEETDPPPvsLKQTLWPPDDTE-----DSDADSLFDSDSERSDLEALDPLPPEPHDPFAH 3068
|
....*.
gi 1958666954 1316 PRFIGP 1321
Cdd:PHA03247 3069 EPDPAT 3074
|
|
| FN3 |
smart00060 |
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1360-1440 |
1.06e-07 |
|
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 50.69 E-value: 1.06e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 1360 PPTNLTVVTVEgcPSFVILDWEKPLNDTVTEYEV-ISRENGSFSGKNKSIQITNQTFS-TVENLKPDTSYEFQVKPKNPL 1437
Cdd:smart00060 3 PPSNLRVTDVT--STSVTLSWEPPPDDGITGYIVgYRVEYREEGSEWKEVNVTPSSTSyTLTGLKPGTEYEFRVRAVNGA 80
|
...
gi 1958666954 1438 GEG 1440
Cdd:smart00060 81 GEG 83
|
|
| fn3 |
pfam00041 |
Fibronectin type III domain; |
1360-1443 |
1.40e-06 |
|
Fibronectin type III domain;
Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 47.79 E-value: 1.40e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 1360 PPTNLTVVTVEgcPSFVILDWEKP--LNDTVTEYEVISRENGSFSGKNkSIQITNQTFS-TVENLKPDTSYEFQVKPKNP 1436
Cdd:pfam00041 2 APSNLTVTDVT--STSLTVSWTPPpdGNGPITGYEVEYRPKNSGEPWN-EITVPGTTTSvTLTGLKPGTEYEVRVQAVNG 78
|
....*..
gi 1958666954 1437 LGEGPAS 1443
Cdd:pfam00041 79 GGEGPPS 85
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
493-702 |
8.05e-05 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 47.07 E-value: 8.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 493 PEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQSTKAPPHKTKKPGRRRPKTTRSPEVPKSKPALEPAT 572
Cdd:NF033839 292 PSAPKPGMQPSPQPEKKEVKPEPETPKPEVKPQLEKPKPEVKPQPEKPKPEVKPQLETPKPEVKPQPEKPKPEVKPQPEK 371
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 573 VPPEILVPTIVPKPPQRPKatrrPEAPQIQPAHEPVTFGSEapalaivtttdIAPVISRTKASVTTLAPKSSRPRTRQRP 652
Cdd:NF033839 372 PKPEVKPQPETPKPEVKPQ----PEKPKPEVKPQPEKPKPE-----------VKPQPEKPKPEVKPQPEKPKPEVKPQPE 436
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 1958666954 653 KYKATPSPKIPQTKPDLGPitaEPSLASTTKKVRRPRPKPKTTPHPEVPQ 702
Cdd:NF033839 437 KPKPEVKPQPEKPKPEVKP---QPETPKPEVKPQPEKPKPEVKPQPEKPK 483
|
|
| fn3 |
pfam00041 |
Fibronectin type III domain; |
116-195 |
1.49e-04 |
|
Fibronectin type III domain;
Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 42.02 E-value: 1.49e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 116 KPLQLVVGTLTPSSVFLSWgflinphhdwTLPSHCSSD-RFYTIRYREKDKEKKWIFQLCPATET--IVENLKPNTVYEF 192
Cdd:pfam00041 2 APSNLTVTDVTSTSLTVSW----------TPPPDGNGPiTGYEVEYRPKNSGEPWNEITVPGTTTsvTLTGLKPGTEYEV 71
|
...
gi 1958666954 193 GVK 195
Cdd:pfam00041 72 RVQ 74
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
462-684 |
1.54e-04 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 46.30 E-value: 1.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 462 PKTSRTAEQPRATLAPSEASFDPrtvEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPpRVKPAPE-PETRPSAQSTKA 540
Cdd:NF033839 308 KEVKPEPETPKPEVKPQLEKPKP---EVKPQPEKPKPEVKPQLETPKPEVKPQPEKPKP-EVKPQPEkPKPEVKPQPETP 383
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 541 PPHKTKKPGRRRPKTTRSPEVPKSKPALEPATVPPEILVPTIVPKPPQRPKatrrPEAPQIQPAHEPVTFGSEAPALAIV 620
Cdd:NF033839 384 KPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQ----PEKPKPEVKPQPEKPKPEVKPQPET 459
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1958666954 621 TTTDIAPVISRTKASVttlapkSSRPRTRQRPKYKATPSPKIPQTKPDLGPITAEPSLASTTKK 684
Cdd:NF033839 460 PKPEVKPQPEKPKPEV------KPQPEKPKPDNSKPQADDKKPSTPNNLSKDKQPSNQASTNEK 517
|
|
| FN3 |
COG3401 |
Fibronectin type 3 domain [General function prediction only]; |
1201-1455 |
2.30e-04 |
|
Fibronectin type 3 domain [General function prediction only];
Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 45.76 E-value: 2.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 1201 PSSTGRNTSVDSHATRKPGLIPGTRHRHTSPRPVPPQRKPLPPNNVTGKPGSAGIISSSRATSPPLKATLKPTGTATERP 1280
Cdd:COG3401 73 AGTTSGVAAVAVAAAPPTATGLTTLTGSGSVGGATNTGLTSSDEVPSPAVGTATTATAVAGGAATAGTYALGAGLYGVDG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 1281 GAEKKQPTAPASEEEFGNTTDFSSSPTKETDPLGKPRFIGPHVRYIPKPDN----KPCSITDSVRRFPTEEATEGNATSP 1356
Cdd:COG3401 153 ANASGTTASSVAGAGVVVSPDTSATAAVATTSLTVTSTTLVDGGGDIEPGTtyyyRVAATDTGGESAPSNEVSVTTPTTP 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 1357 PqNPPTNLTVVTVEgcPSFVILDWEKPLNDTVTEYEvISRENGSfSGKNKSIQITNQTFSTVENLKPDTSYEFQVKPKNP 1436
Cdd:COG3401 233 P-SAPTGLTATADT--PGSVTLSWDPVTESDATGYR-VYRSNSG-DGPFTKVATVTTTSYTDTGLTNGTTYYYRVTAVDA 307
|
250 260
....*....|....*....|
gi 1958666954 1437 LG-EGPASNTVAFSTESADP 1455
Cdd:COG3401 308 AGnESAPSNVVSVTTDLTPP 327
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
496-750 |
2.40e-04 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 45.91 E-value: 2.40e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 496 RPTTAAPQQTTSIPSTPKRQSTPKPPRVKP--APEPET----RPSAQSTKAPPHKTKKPGRRRPKTTRSPevpkskPALE 569
Cdd:pfam03154 324 RIHTPPSQSQLQSQQPPREQPLPPAPLSMPhiKPPPTTpipqLPNPQSHKHPPHLSGPSPFQMNSNLPPP------PALK 397
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 570 PATVPPEILVPTIVPKPPQRPKATRRPEAPQIQPahepvtfgseapalAIVTTTDIAPVISRTKASVTTLAPKSSRPRTR 649
Cdd:pfam03154 398 PLSSLSTHHPPSAHPPPLQLMPQSQQLPPPPAQP--------------PVLTQSQSLPPPAASHPPTSGLHQVPSQSPFP 463
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 650 QRPKYKATPSPKIPqtkpdlgPITAEPSLASTTKKVRRPRPKPKTTPHPeVPQTilvPATSLEPVIRTETPgttlvPKLS 729
Cdd:pfam03154 464 QHPFVPGGPPPITP-------PSGPPTSTSSAMPGIQPPSSASVSSSGP-VPAA---VSCPLPPVQIKEEA-----LDEA 527
|
250 260
....*....|....*....|.
gi 1958666954 730 QQPDFPHPKPkttRSPAAPPT 750
Cdd:pfam03154 528 EEPESPPPPP---RSPSPEPT 545
|
|
| FN3 |
COG3401 |
Fibronectin type 3 domain [General function prediction only]; |
1344-1498 |
4.59e-04 |
|
Fibronectin type 3 domain [General function prediction only];
Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 44.99 E-value: 4.59e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 1344 PTEEATEGNATSPPQnPPTNLTVVTVEgcPSFVILDWEKPLNDTVTEYEV--ISRENGSFSGKNKSIqitNQTFSTVENL 1421
Cdd:COG3401 314 PSNVVSVTTDLTPPA-APSGLTATAVG--SSSITLSWTASSDADVTGYNVyrSTSGGGTYTKIAETV---TTTSYTDTGL 387
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1958666954 1422 KPDTSYEFQVKPKNPLG-EGPASNTVAFSTESADPRVSEPISAGRDAIWTERPFNSDSYSECKGKQYVKRTWYKKFVG 1498
Cdd:COG3401 388 TPGTTYYYKVTAVDAAGnESAPSEEVSATTASAASGESLTASVDAVPLTDVAGATAAASAASNPGVSAAVLADGGDTG 465
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
116-195 |
1.44e-03 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 39.40 E-value: 1.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 116 KPLQLVVGTLTPSSVFLSWgfliNPHHDWTLPSHcssdrFYTIRYREKDKE--KKWIFQLCPATETIVENLKPNTVYEFG 193
Cdd:cd00063 3 PPTNLRVTDVTSTSVTLSW----TPPEDDGGPIT-----GYVVEYREKGSGdwKEVEVTPGSETSYTLTGLKPGTEYEFR 73
|
..
gi 1958666954 194 VK 195
Cdd:cd00063 74 VR 75
|
|
| FN3 |
smart00060 |
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
117-195 |
2.55e-03 |
|
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 38.36 E-value: 2.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 117 PLQLVVGTLTPSSVFLSWgflinphhdwtLPSHCSSDRFYTIRYREKDKEKKWIFQLCPA----TETIVENLKPNTVYEF 192
Cdd:smart00060 4 PSNLRVTDVTSTSVTLSW-----------EPPPDDGITGYIVGYRVEYREEGSEWKEVNVtpssTSYTLTGLKPGTEYEF 72
|
...
gi 1958666954 193 GVK 195
Cdd:smart00060 73 RVR 75
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
358-897 |
1.65e-14 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 79.60 E-value: 1.65e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 358 SEKTPETAQSVL-IPESELLLSSLAPKGSP--------EFPEAKTAFPSEKPGGS-------LASSEEPWVVPGAKTSEd 421
Cdd:PHA03247 2449 ADGDPFFARTILgAPFSLSLLLGELFPGAPvyrrpaeaRFPFAAGAAPDPGGGGPpdpdappAPSRLAPAILPDEPVGE- 2527
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 422 srVVQPRTATYDVVSSSATSDETEVEPHTATSDPIldsvPPKTSRTAEQPRATLAPSEASFDPRTveifTSPEVRPTTAA 501
Cdd:PHA03247 2528 --PVHPRMLTWIRGLEELASDDAGDPPPPLPPAAP----PAAPDRSVPPPRPAPRPSEPAVTSRA----RRPDAPPQSAR 2597
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 502 PQQTTSIPSTPKR--QSTPKPPRVKPAPEPETRPSAQSTKAP------------PHKTKKPGR-RRPKTTRSPEVPKS-- 564
Cdd:PHA03247 2598 PRAPVDDRGDPRGpaPPSPLPPDTHAPDPPPPSPSPAANEPDphppptvppperPRDDPAPGRvSRPRRARRLGRAAQas 2677
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 565 -------KPALEPATVP------PEILVPTIVPKPPQRPKATRRPEAPQIQPAHEPVTFGSEAPALAIVTTTDIAPVISR 631
Cdd:PHA03247 2678 sppqrprRRAARPTVGSltsladPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARP 2757
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 632 TKASVTTLAPKSSRPRTRQRPKYKATPSPKIPQTKPDLGPITAEPSLASTTKKVRRPRPkpkTTPHPEVPQTILVPATSL 711
Cdd:PHA03247 2758 ARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAA---ALPPAASPAGPLPPPTSA 2834
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 712 EPVIRTETPG---TTLVPKLSQQPDFPHPKPKTTRSPAAPPTElvsttvfEPVIPLKEDPVTTIVPFTDLEPATDLETPV 788
Cdd:PHA03247 2835 QPTAPPPPPGpppPSLPLGGSVAPGGDVRRRPPSRSPAAKPAA-------PARPPVRRLARPAVSRSTESFALPPDQPER 2907
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 789 AFRTEAPRTTLASKKSQRTRRPRPRPPKATLSPQAPKTKTVPAVVLEPVTLRPEVQVTTLAPKKTQIKHRPRPKPKPIPS 868
Cdd:PHA03247 2908 PPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSRE 2987
|
570 580
....*....|....*....|....*....
gi 1958666954 869 pevAESKPVPTKEREPVTlRTESWVTTKA 897
Cdd:PHA03247 2988 ---APASSTPPLTGHSLS-RVSSWASSLA 3012
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
548-1102 |
9.76e-12 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 70.35 E-value: 9.76e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 548 PGRRRPKTTRSPEVPKSKPalEPATVPPEilvPTIVPKPPQRPKATRRPEAPQIQPAHEPV-TFGSEAPALAIVTTTDIA 626
Cdd:PHA03247 2478 PVYRRPAEARFPFAAGAAP--DPGGGGPP---DPDAPPAPSRLAPAILPDEPVGEPVHPRMlTWIRGLEELASDDAGDPP 2552
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 627 PVI------SRTKASVTT--LAPKSSRPRTRQRPKYKATP----SPKIPQTKPDLGPITAEPSLASTTKKVRRPrPKPKT 694
Cdd:PHA03247 2553 PPLppaappAAPDRSVPPprPAPRPSEPAVTSRARRPDAPpqsaRPRAPVDDRGDPRGPAPPSPLPPDTHAPDP-PPPSP 2631
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 695 TPHP-EVPQTILVPATSLEPVIRTETPGTTLVPKLSQ---QPDFPHPKPKTTRSPAAPPTELVSTTVFEPVIPLK--EDP 768
Cdd:PHA03247 2632 SPAAnEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARrlgRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPtpEPA 2711
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 769 VTTIVPFTDLEPAtdletPVAFRTEAPRTTLAskksqrtrRPRPRPPKATLSPQAPKTKTVPAVVLEPVTLRPEVQVTTL 848
Cdd:PHA03247 2712 PHALVSATPLPPG-----PAAARQASPALPAA--------PAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAG 2778
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 849 APKKTqikhrprPKPKPIPSPEVAESKPVPtkeREPvtlrteswvttkAPKTPKRTHRVRPKPKTTTPEAPLTKPVAATD 928
Cdd:PHA03247 2779 PPRRL-------TRPAVASLSESRESLPSP---WDP------------ADPPAAVLAPAAALPPAASPAGPLPPPTSAQP 2836
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 929 LESSALSTEVPTTVVLTTALVPATLRTKSPkTTLAPSVQRTRRPRPRPKTTARTDVSESKsvsddlELVAFSTESPQKti 1008
Cdd:PHA03247 2837 TAPPPPPGPPPPSLPLGGSVAPGGDVRRRP-PSRSPAAKPAAPARPPVRRLARPAVSRST------ESFALPPDQPER-- 2907
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 1009 aPRQTTSPPPKLKPPHSRRPAKEQVPkgsLHTTSKPKMPPSPE-----VVDITSVPKDEQLSHKPDPEVSQSETVLPPVT 1083
Cdd:PHA03247 2908 -PPQPQAPPPPQPQPQPPPPPQPQPP---PPPPPRPQPPLAPTtdpagAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPA 2983
|
570
....*....|....*....
gi 1958666954 1084 FRVEPPKTTIVPLETRDIP 1102
Cdd:PHA03247 2984 PSREAPASSTPPLTGHSLS 3002
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1359-1450 |
3.57e-10 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 58.28 E-value: 3.57e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 1359 NPPTNLTVVTVEgcPSFVILDWEKPLNDT--VTEYEVISRENGSFSGKNKSIQITNQTFSTVENLKPDTSYEFQVKPKNP 1436
Cdd:cd00063 2 SPPTNLRVTDVT--STSVTLSWTPPEDDGgpITGYVVEYREKGSGDWKEVEVTPGSETSYTLTGLKPGTEYEFRVRAVNG 79
|
90
....*....|....
gi 1958666954 1437 LGEGPASNTVAFST 1450
Cdd:cd00063 80 GGESPPSESVTVTT 93
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
313-628 |
4.09e-08 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 58.41 E-value: 4.09e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 313 PAESKTPEVEKVAGQPVTVTPETVSRSTKPTLASALDTAETALVLSEKTPETAQSVLIPESELLLSSLAPKGSPEFPEAK 392
Cdd:PHA03247 2702 PPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPR 2781
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 393 TAFPSekPGGSLASSEEPWVVPGAkTSEDSRVVQPRTATYDVVSSSATSdetevEPHTATSDPILDSVPPKTSRTAEQPR 472
Cdd:PHA03247 2782 RLTRP--AVASLSESRESLPSPWD-PADPPAAVLAPAAALPPAASPAGP-----LPPPTSAQPTAPPPPPGPPPPSLPLG 2853
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 473 ATLAP-------SEASFDPRTVEIFTSPEVR--PTTAAPQQTTSI---PSTPKRQSTPK-PPRVKPAPEPETRPSAQSTK 539
Cdd:PHA03247 2854 GSVAPggdvrrrPPSRSPAAKPAAPARPPVRrlARPAVSRSTESFalpPDQPERPPQPQaPPPPQPQPQPPPPPQPQPPP 2933
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 540 APPHKTKKPGRRRPKTTRSPEVPKSKPALE-PATVPPEILVPTIVPKPPQRPKATrrPEAPQIQPAHEPVT-FGSEAPAL 617
Cdd:PHA03247 2934 PPPPRPQPPLAPTTDPAGAGEPSGAVPQPWlGALVPGRVAVPRFRVPQPAPSREA--PASSTPPLTGHSLSrVSSWASSL 3011
|
330
....*....|.
gi 1958666954 618 AIVTTTDIAPV 628
Cdd:PHA03247 3012 ALHEETDPPPV 3022
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
309-575 |
4.93e-08 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 58.41 E-value: 4.93e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 309 TLALPAESKTPEVEKVAGQPVTVTPetvSRSTKPTLASALDTAETALvlSEKTPETAQSVLIPESELLLSSLAPKGSPEF 388
Cdd:PHA03247 2756 RPARPPTTAGPPAPAPPAAPAAGPP---RRLTRPAVASLSESRESLP--SPWDPADPPAAVLAPAAALPPAASPAGPLPP 2830
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 389 PEAKTAFPSEKPGGSLASSEEP--WVVPGAKtsedsrvvqprtatydvVSSSATSDETEVEPHTATSDPILDSVPPKTSR 466
Cdd:PHA03247 2831 PTSAQPTAPPPPPGPPPPSLPLggSVAPGGD-----------------VRRRPPSRSPAAKPAAPARPPVRRLARPAVSR 2893
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 467 TAE---QPRATLAPseasfdPRTVEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAqstKAPPH 543
Cdd:PHA03247 2894 STEsfaLPPDQPER------PPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAV---PQPWL 2964
|
250 260 270
....*....|....*....|....*....|..
gi 1958666954 544 KTKKPGRRRPKTTRSPEVPKSKPALEPATVPP 575
Cdd:PHA03247 2965 GALVPGRVAVPRFRVPQPAPSREAPASSTPPL 2996
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
707-1321 |
7.63e-08 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 57.64 E-value: 7.63e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 707 PATSLEPVIRTETPGttlvPKLSQQPDFPHPKPKTTRSPAAPPTElvstTVFEPVIP--------LKE-------DPvTT 771
Cdd:PHA03247 2483 PAEARFPFAAGAAPD----PGGGGPPDPDAPPAPSRLAPAILPDE----PVGEPVHPrmltwirgLEElasddagDP-PP 2553
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 772 IVPFTDLEPATDLETPVAfrTEAPRTT---LASKKSQRTRRPRPRPPKATLSPQAPKTKTVPAVVLEPVTLRPEVQVTTL 848
Cdd:PHA03247 2554 PLPPAAPPAAPDRSVPPP--RPAPRPSepaVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSP 2631
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 849 APKKTQikhRPRPKPKPIPSPEVAESKPVPTKEREPvtLRTESWVTTKAPKTPKRTHRVRPKPKTTTPEAPLTKPvaaTD 928
Cdd:PHA03247 2632 SPAANE---PDPHPPPTVPPPERPRDDPAPGRVSRP--RRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADP---PP 2703
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 929 LESSALSTEVPTTVVLTTALVPATLRTKSPKTTLAPSVQRTRRPRPRPKTTARTdvsesksvsddlelvafstESPQKTI 1008
Cdd:PHA03247 2704 PPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARP-------------------ARPPTTA 2764
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 1009 APRQTTSP--PPKLKPPHSRRPAkeqVPKGSLHTTSKPKMP-PSPEVVDITSVPKDEQLSHKPDPEVSQSETVLPPVTFR 1085
Cdd:PHA03247 2765 GPPAPAPPaaPAAGPPRRLTRPA---VASLSESRESLPSPWdPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPP 2841
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 1086 VEPPKTTIVPLETRDIPLIPVISPRPSEEELQTTMEQTDQSTQELFTTKIPRTTE---LAKTTQAPHRLHTTPVRPRIPE 1162
Cdd:PHA03247 2842 PPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTEsfaLPPDQPERPPQPQAPPPPQPQP 2921
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 1163 RPHGRPALNKTTTRPDRTKSRgmshkngVGPGTKQTPKPSSTGRNTSVDSHATrKPGLIPGTRHRHTSPRP-VPPQRKPL 1241
Cdd:PHA03247 2922 QPPPPPQPQPPPPPPPRPQPP-------LAPTTDPAGAGEPSGAVPQPWLGAL-VPGRVAVPRFRVPQPAPsREAPASST 2993
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 1242 PPNNVTGKPGSAGIISS----SRATSPP--LKATLKPTGTATerpgaEKKQPTAPASEEEFGNTTDFSSSPTKETDPLGK 1315
Cdd:PHA03247 2994 PPLTGHSLSRVSSWASSlalhEETDPPPvsLKQTLWPPDDTE-----DSDADSLFDSDSERSDLEALDPLPPEPHDPFAH 3068
|
....*.
gi 1958666954 1316 PRFIGP 1321
Cdd:PHA03247 3069 EPDPAT 3074
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
447-769 |
9.78e-08 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 57.17 E-value: 9.78e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 447 EPHTATSDPILDSVPPKTSRTAEQPRATLAPSEASFDprtveiftSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPA 526
Cdd:PRK07003 359 EPAVTGGGAPGGGVPARVAGAVPAPGARAAAAVGASA--------VPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAP 430
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 527 PEPETRPSAQSTKAPPHKTKKPGrrrpkttrSPEVPKSKPALEPATVPPEILVPTIVPKPPQRPKATRRPEAPQIQPAHE 606
Cdd:PRK07003 431 APPATADRGDDAADGDAPVPAKA--------NARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAA 502
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 607 PVTFGSEAPALAIVTTTDIAPVISRTKASVTTLAPKSSRPRTR------------------QRPKYKATPSPKIPQTKPD 668
Cdd:PRK07003 503 TPAAVPDARAPAAASREDAPAAAAPPAPEARPPTPAAAAPAARaggaaaaldvlrnagmrvSSDRGARAAAAAKPAAAPA 582
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 669 LGPITAEPSLASTTKKVRRPRPKPKTTPHP------------------EVPQTILVPATSLEPVIrteTPGTTLVPKLSQ 730
Cdd:PRK07003 583 AAPKPAAPRVAVQVPTPRARAATGDAPPNGaaraeqaaesrgapppweDIPPDDYVPLSADEGFG---GPDDGFVPVFDS 659
|
330 340 350
....*....|....*....|....*....|....*....
gi 1958666954 731 QPDFPHPKPKTTRSPAAPptelVSTTVFEPVIPLkeDPV 769
Cdd:PRK07003 660 GPDDVRVAPKPADAPAPP----VDTRPLPPAIPL--DAI 692
|
|
| FN3 |
smart00060 |
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1360-1440 |
1.06e-07 |
|
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 50.69 E-value: 1.06e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 1360 PPTNLTVVTVEgcPSFVILDWEKPLNDTVTEYEV-ISRENGSFSGKNKSIQITNQTFS-TVENLKPDTSYEFQVKPKNPL 1437
Cdd:smart00060 3 PPSNLRVTDVT--STSVTLSWEPPPDDGITGYIVgYRVEYREEGSEWKEVNVTPSSTSyTLTGLKPGTEYEFRVRAVNGA 80
|
...
gi 1958666954 1438 GEG 1440
Cdd:smart00060 81 GEG 83
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
518-1058 |
3.57e-07 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 55.08 E-value: 3.57e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 518 PKPPRVKPAPEPETRPSAQSTKAPPHKtkkpgrrRPKTTRSPEVPKsKPALEPATVPPEILVPTIVPKPPQRPKATRRPE 597
Cdd:PTZ00449 521 PKAPGDKEGEEGEHEDSKESDEPKEGG-------KPGETKEGEVGK-KPGPAKEHKPSKIPTLSKKPEFPKDPKHPKDPE 592
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 598 APQiqpahepvtfgseapalaivtttdiapvisrtkasvttlapKSSRPRTRQRPKYKatPSPKIPQtkpdLGPITAEPS 677
Cdd:PTZ00449 593 EPK-----------------------------------------KPKRPRSAQRPTRP--KSPKLPE----LLDIPKSPK 625
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 678 LASTTKKVRRPrPKPKTTPHPEVPQTILVPATSLEPVirtetpgttlVPKLSQQPDFPHPKPKTTRSPAAPPTELVSTTV 757
Cdd:PTZ00449 626 RPESPKSPKRP-PPPQRPSSPERPEGPKIIKSPKPPK----------SPKPPFDPKFKEKFYDDYLDAAAKSKETKTTVV 694
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 758 fepvipLKEDPVTTIVPFTDLEPATDLETPVAFRTEAPRTtlaskksqrtrrprprpPKATLSPqaPKTKTVPAVVLEPV 837
Cdd:PTZ00449 695 ------LDESFESILKETLPETPGTPFTTPRPLPPKLPRD-----------------EEFPFEP--IGDPDAEQPDDIEF 749
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 838 TLRPEvqvttlaPKKTQIKHRPRPKPKPIPSPEVAESKPVPTKEREPvtlrteswvtTKAPKTPKRTHRVRPKPKTTTPE 917
Cdd:PTZ00449 750 FTPPE-------EERTFFHETPADTPLPDILAEEFKEEDIHAETGEP----------DEAMKRPDSPSEHEDKPPGDHPS 812
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 918 APLTKpvaaTDLESSALSTEVPTTVVLTTALVPATLRTKSPKTTLAPSVQRTRRPRPRPKTTARTDVSESKSVSDDLElv 997
Cdd:PTZ00449 813 LPKKR----HRLDGLALSTTDLESDAGRIAKDASGKIVKLKRSKSFDDLTTVEEAEEMGAEARKIVVDDDGTEADDED-- 886
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1958666954 998 AFSTESPQKTIAPRQTtsppPKLKPPHSRRPAKeqvpkgslhtTSKPKMPPSPEVVDITSV 1058
Cdd:PTZ00449 887 THPPEEKHKSEVRRRR----PPKKPSKPKKPSK----------PKKPKKPDSAFIPSIIAI 933
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
384-702 |
3.89e-07 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 55.08 E-value: 3.89e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 384 GSPEFPEAkTAFPSEKPGGSLASSEEPWVVPGAKTSEDSRvvQPRTATYDVVsssaTSDETEVEPHTATSDPILDSVP-- 461
Cdd:PTZ00449 509 EPPEGPEA-SGLPPKAPGDKEGEEGEHEDSKESDEPKEGG--KPGETKEGEV----GKKPGPAKEHKPSKIPTLSKKPef 581
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 462 ---PKTSRTAEQPRATLAPSEASfdprtveiftSPEVRPTTAAPQqTTSIPSTPKRQSTPKPPRVKPAPE-------PET 531
Cdd:PTZ00449 582 pkdPKHPKDPEEPKKPKRPRSAQ----------RPTRPKSPKLPE-LLDIPKSPKRPESPKSPKRPPPPQrpssperPEG 650
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 532 RPSAQSTKaPPHKTKKP----------------GRRRPKTTRSPEVPKSKPALEPATVPPEILVPTIVPK--PPQRPkat 593
Cdd:PTZ00449 651 PKIIKSPK-PPKSPKPPfdpkfkekfyddyldaAAKSKETKTTVVLDESFESILKETLPETPGTPFTTPRplPPKLP--- 726
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 594 RRPEAPqiqpaHEPVTfgseapalaivtttdiAPVISRTKASVTTLAPKSSRPRTRQRPKYKATPSPKIPQTK-PDLGPI 672
Cdd:PTZ00449 727 RDEEFP-----FEPIG----------------DPDAEQPDDIEFFTPPEEERTFFHETPADTPLPDILAEEFKeEDIHAE 785
|
330 340 350
....*....|....*....|....*....|..
gi 1958666954 673 TAEPSLAstTKKVRRPRPKPKTTP--HPEVPQ 702
Cdd:PTZ00449 786 TGEPDEA--MKRPDSPSEHEDKPPgdHPSLPK 815
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
340-666 |
5.91e-07 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 54.71 E-value: 5.91e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 340 TKPTLASALDTAETALVLSEKTPETaQSVLIPESELLLSSLAPKGSPeFPEAKTAFPSEKPGGSLASSEEPWVVPGAKTS 419
Cdd:PRK10263 317 TEPVAVAAAATTATQSWAAPVEPVT-QTPPVASVDVPPAQPTVAWQP-VPGPQTGEPVIAPAPEGYPQQSQYAQPAVQYN 394
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 420 EDSRVVQPRTATYDVVSSSATSDETEVEPHTATSDPILDSVPPKTSRTAEQPRATlAPSEASFDPRTVEIFTSPEVRPTT 499
Cdd:PRK10263 395 EPLQQPVQPQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQA-EEQQSTFAPQSTYQTEQTYQQPAA 473
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 500 AAPQQTtsipstpKRQSTPKPPRVKPAPE-PETRPSAQSTKAPPHKTKKPGRRRPKTTRSPEvPKSKPALEPATVPPEIL 578
Cdd:PRK10263 474 QEPLYQ-------QPQPVEQQPVVEPEPVvEETKPARPPLYYFEEVEEKRAREREQLAAWYQ-PIPEPVKEPEPIKSSLK 545
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 579 VPTIVPKPPQRPKATRRPEAPQIQPA--HEPVTFGSEAPALAIVTTTDIAPvisRTKASVTTLAPKSSRPRTRQRPKYKA 656
Cdd:PRK10263 546 APSVAAVPPVEAAAAVSPLASGVKKAtlATGAAATVAAPVFSLANSGGPRP---QVKEGIGPQLPRPKRIRVPTRRELAS 622
|
330
....*....|....
gi 1958666954 657 ----TPSPKIPQTK 666
Cdd:PRK10263 623 ygikLPSQRAAEEK 636
|
|
| fn3 |
pfam00041 |
Fibronectin type III domain; |
1360-1443 |
1.40e-06 |
|
Fibronectin type III domain;
Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 47.79 E-value: 1.40e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 1360 PPTNLTVVTVEgcPSFVILDWEKP--LNDTVTEYEVISRENGSFSGKNkSIQITNQTFS-TVENLKPDTSYEFQVKPKNP 1436
Cdd:pfam00041 2 APSNLTVTDVT--STSLTVSWTPPpdGNGPITGYEVEYRPKNSGEPWN-EITVPGTTTSvTLTGLKPGTEYEVRVQAVNG 78
|
....*..
gi 1958666954 1437 LGEGPAS 1443
Cdd:pfam00041 79 GGEGPPS 85
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
484-670 |
1.96e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 52.57 E-value: 1.96e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 484 PRTVEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQS--TKAPPHKTKKPGRRRPKTTRSPEV 561
Cdd:PRK12323 374 PATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSpaPEALAAARQASARGPGGAPAPAPA 453
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 562 PKSKP--ALEPATVPPEILVPTIVPKPPQRPKATRRPEAPQIQPAHE--PVTFGSEAP-----ALAIVTTTDIA-PVISR 631
Cdd:PRK12323 454 PAAAPaaAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEelPPEFASPAPaqpdaAPAGWVAESIPdPATAD 533
|
170 180 190
....*....|....*....|....*....|....*....
gi 1958666954 632 TKASVTTLAPKSSRPRTrqrPKYKATPSPKIPQTKPDLG 670
Cdd:PRK12323 534 PDDAFETLAPAPAAAPA---PRAAAATEPVVAPRPPRAS 569
|
|
| PRK14949 |
PRK14949 |
DNA polymerase III subunits gamma and tau; Provisional |
284-658 |
7.89e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237863 [Multi-domain] Cd Length: 944 Bit Score: 50.88 E-value: 7.89e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 284 STVKLP---SSIMLEISDALKAQLAKNETLALPAESKTPEVEKVAGQPVTVTPETVSRS-TKPTLASALDTAETALVLSE 359
Cdd:PRK14949 372 AEISLPegqTPSALAAAVQAPHANEPQFVNAAPAEKKTALTEQTTAQQQVQAANAEAVAeADASAEPADTVEQALDDESE 451
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 360 KTPEtaqsvLIPESELLLSSLAPKGSpEFPEAKTAFPSEKPGGSLASSEEPWVVP-GAKTSEDSRVVQPRTATyDVVSSS 438
Cdd:PRK14949 452 LLAA-----LNAEQAVILSQAQSQGF-EASSSLDADNSAVPEQIDSTAEQSVVNPsVTDTQVDDTSASNNSAA-DNTVDD 524
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 439 ATSDETEVEPHTATSDPILDSVPPKTSrtAEQPRATLAPSEASFDPRTVEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTP 518
Cdd:PRK14949 525 NYSAEDTLESNGLDEGDYAQDSAPLDA--YQDDYVAFSSESYNALSDDEQHSANVQSAQSAAEAQPSSQSLSPISAVTTA 602
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 519 KPPRV------------------------------KPAPE--PETRPSAQSTKAPPHKTKKPgrRRPKTTRSPEVPKSKP 566
Cdd:PRK14949 603 AASLAdddildavlaardsllsdldalspkegdgkKSSADrkPKTPPSRAPPASLSKPASSP--DASQTSASFDLDPDFE 680
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 567 ALEPATVPPEILVPTIVPKPPQRPKATRRP---EAPQIQPAHEPVTFGSEAPALAIVTTTDIAPvisrTKASVTTLAPKS 643
Cdd:PRK14949 681 LATHQSVPEAALASGSAPAPPPVPDPYDRPpweEAPEVASANDGPNNAAEGNLSESVEDASNSE----LQAVEQQATHQP 756
|
410
....*....|....*
gi 1958666954 644 SRPRTRQRPKYKATP 658
Cdd:PRK14949 757 QVQAEAQSPASTTAL 771
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
448-648 |
1.16e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 50.26 E-value: 1.16e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 448 PHTATSDPILDSVPPKTSRTAEQPRATLAPSEASFDPRTVEIFTSPEVRPTTAAPQ----QTTSIPSTPKRQSTPKP-PR 522
Cdd:PRK12323 374 PATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPApealAAARQASARGPGGAPAPaPA 453
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 523 VKPAPEPETRPSAQSTKAPPHKTKKPGRRRPKTTRSPEVPKSKPALE--PATVPPEILVPTIVPKPPQRPKATRRPEAPQ 600
Cdd:PRK12323 454 PAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEelPPEFASPAPAQPDAAPAGWVAESIPDPATAD 533
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1958666954 601 IQPAHEPVTfgsEAPALAIVTTTDIAPvisrtKASVTTLAPKSSRPRT 648
Cdd:PRK12323 534 PDDAFETLA---PAPAAAPAPRAAAAT-----EPVVAPRPPRASASGL 573
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
438-749 |
1.42e-05 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 50.17 E-value: 1.42e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 438 SATSDETEVEPHT------ATSDPILDSVPPKTSRTAEQPR--ATLAPSEASFDPRTVEIFTSPEVRPTTAAPQQTTSIP 509
Cdd:PHA03307 25 PATPGDAADDLLSgsqgqlVSDSAELAAVTVVAGAAACDRFepPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREG 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 510 STPKRQSTPKPPRVKPAPEPETRPSAQSTKAPPHKTKKPGRRRPKtTRSPEVPKSKPALEPATVPP----------EILV 579
Cdd:PHA03307 105 SPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPA-ASPPAAGASPAAVASDAASSrqaalplsspEETA 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 580 PTIVPKPPQRPKATRRPEA-PQIQPAHEPVTFGSEAPALAIVTTTDIAPVISRTKASVTTLAPKSSRPRT---RQRPKYK 655
Cdd:PHA03307 184 RAPSSPPAEPPPSTPPAAAsPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENecpLPRPAPI 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 656 ATPSPKIPQTKPDLGPITAEPSLASTTKKVRRPRPKP-------KTTPHPEVPQTILVPATSLE-PVIRTETPGTTLVPk 727
Cdd:PHA03307 264 TLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPsspgsgpAPSSPRASSSSSSSRESSSSsTSSSSESSRGAAVS- 342
|
330 340
....*....|....*....|..
gi 1958666954 728 lSQQPDFPHPKPKTTRSPAAPP 749
Cdd:PHA03307 343 -PGPSPSRSPSPSRPPPPADPS 363
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
500-731 |
1.48e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 49.87 E-value: 1.48e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 500 AAPQQTTSIPSTPKRQSTPKPPRVKPAP--EPETRPSAQSTKAPPHKTKKPGRRRPKTTRSPEVPKSKPALEPATVPPEI 577
Cdd:PRK12323 372 AGPATAAAAPVAQPAPAAAAPAAAAPAPaaPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPA 451
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 578 LVPTIVPKPPQRPKATrrpeAPQIQPAHEPVTFGSEAPALAIVTTTDIAPVISRTKASVTTLAPKSSRPRTRQRPKYkAT 657
Cdd:PRK12323 452 PAPAAAPAAAARPAAA----GPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAE-SI 526
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1958666954 658 PSPKIPQTKPDLGPITAEPSLASTTKKVRRPRPKPKTTPhPEVPQTILVPATSLE-PVIRTETPGTTLVPKLSQQ 731
Cdd:PRK12323 527 PDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRP-PRASASGLPDMFDGDwPALAARLPVRGLAQQLARQ 600
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
462-599 |
2.39e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 48.94 E-value: 2.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 462 PKTSRTAEQPRATLAPSEASFdprtveifTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQSTKAP 541
Cdd:PRK14951 366 PAAAAEAAAPAEKKTPARPEA--------AAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAA 437
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 1958666954 542 PHKTKKPGRRRPKttrSPEVPKSKPALEPATVPPEILVPTIVPKPPQRPKATRRPEAP 599
Cdd:PRK14951 438 PAAAPAAVALAPA---PPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1003-1381 |
6.04e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 48.01 E-value: 6.04e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 1003 SPQKTIAPRQTTSPPPklkPPHSRRPAKEQVPKGSlhttskPKMPPSPEVVDITSVPKDEQLSHKPDPEVSQSETVLPPV 1082
Cdd:PHA03247 2611 PAPPSPLPPDTHAPDP---PPPSPSPAANEPDPHP------PPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQ 2681
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 1083 TFRVEPPKTTIVPLETRDIPLIPVISPRP------SEEELQTTMEQTDQSTQELFTTKIPRTTELAKTTQAPHRLHTTPV 1156
Cdd:PHA03247 2682 RPRRRAARPTVGSLTSLADPPPPPPTPEPaphalvSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPP 2761
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 1157 RPRIPER---PHGRPALNKTTTRPDRTKSRGMSHKNGVGPGTKQTPKPSSTGRNTSVDSHATRKPGLIPGTRHRHTSPRP 1233
Cdd:PHA03247 2762 TTAGPPApapPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPP 2841
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 1234 VP-----------------PQRKPLPPNNVTGKPGSAGIISSSRATSPPLKATLK--------------PTGTATERPGA 1282
Cdd:PHA03247 2842 PPgppppslplggsvapggDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTEsfalppdqperppqPQAPPPPQPQP 2921
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 1283 EKKQPTAPASEEEFGNTTDFSSSPTKETDPLGKPRFIGPHvryiPKPDNKPCSITDSVRRFPTEEATEGNATSPPQNPPT 1362
Cdd:PHA03247 2922 QPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQ----PWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLT 2997
|
410
....*....|....*....
gi 1958666954 1363 NLTVVTVEGCPSFVILDWE 1381
Cdd:PHA03247 2998 GHSLSRVSSWASSLALHEE 3016
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
396-670 |
7.39e-05 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 47.75 E-value: 7.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 396 PSEKPGGSLASSEEP-------WVVPGAKTSEDSRVVQPRTATYDVVSSSATSDETEVEPHTAT-SDPILDSVPPKTSRT 467
Cdd:PHA03378 602 PSQTPEPPTTQSHIPetsaprqWPMPLRPIPMRPLRMQPITFNVLVFPTPHQPPQVEITPYKPTwTQIGHIPYQPSPTGA 681
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 468 AEQPRATLAPSEASFDPRTveiftspevrPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQSTKAPPHKTKK 547
Cdd:PHA03378 682 NTMLPIQWAPGTMQPPPRA----------PTPMRPPAAPPGRAQRPAAATGRARPPAAAPGRARPPAAAPGRARPPAAAP 751
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 548 PGRRRPKTTRSPEVPKSKPALEPATVPPeilvPTIVPKPPQRPKATRRPEaPQIQPAHEPVTFGSEAPALAIVTTTDIAp 627
Cdd:PHA03378 752 GRARPPAAAPGRARPPAAAPGAPTPQPP----PQAPPAPQQRPRGAPTPQ-PPPQAGPTSMQLMPRAAPGQQGPTKQIL- 825
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 1958666954 628 visrtkASVTTLAPKSSRPRTRqRPKYKATPSPKIPQTKPDLG 670
Cdd:PHA03378 826 ------RQLLTGGVKRGRPSLK-KPAALERQAAAGPTPSPGSG 861
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
493-702 |
8.05e-05 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 47.07 E-value: 8.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 493 PEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQSTKAPPHKTKKPGRRRPKTTRSPEVPKSKPALEPAT 572
Cdd:NF033839 292 PSAPKPGMQPSPQPEKKEVKPEPETPKPEVKPQLEKPKPEVKPQPEKPKPEVKPQLETPKPEVKPQPEKPKPEVKPQPEK 371
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 573 VPPEILVPTIVPKPPQRPKatrrPEAPQIQPAHEPVTFGSEapalaivtttdIAPVISRTKASVTTLAPKSSRPRTRQRP 652
Cdd:NF033839 372 PKPEVKPQPETPKPEVKPQ----PEKPKPEVKPQPEKPKPE-----------VKPQPEKPKPEVKPQPEKPKPEVKPQPE 436
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 1958666954 653 KYKATPSPKIPQTKPDLGPitaEPSLASTTKKVRRPRPKPKTTPHPEVPQ 702
Cdd:NF033839 437 KPKPEVKPQPEKPKPEVKP---QPETPKPEVKPQPEKPKPEVKPQPEKPK 483
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
496-657 |
1.07e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 47.02 E-value: 1.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 496 RPTTAAPQQTTSIPSTPKRqstpkPPRVKPAPEPETRPSAQSTKAPPhktkkPGRRRPKTTRSPEVPKSKPALEPATVPP 575
Cdd:PRK14951 365 KPAAAAEAAAPAEKKTPAR-----PEAAAPAAAPVAQAAAAPAPAAA-----PAAAASAPAAPPAAAPPAPVAAPAAAAP 434
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 576 eilvptiVPKPPQRPKATRRPEAPQIQPAHEPVtfgseapalAIVTTTDIAPVISRTKASVTTLAPKSSRPRTRQRPKYK 655
Cdd:PRK14951 435 -------AAAPAAAPAAVALAPAPPAQAAPETV---------AIPVRVAPEPAVASAAPAPAAAPAAARLTPTEEGDVWH 498
|
..
gi 1958666954 656 AT 657
Cdd:PRK14951 499 AT 500
|
|
| fn3 |
pfam00041 |
Fibronectin type III domain; |
116-195 |
1.49e-04 |
|
Fibronectin type III domain;
Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 42.02 E-value: 1.49e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 116 KPLQLVVGTLTPSSVFLSWgflinphhdwTLPSHCSSD-RFYTIRYREKDKEKKWIFQLCPATET--IVENLKPNTVYEF 192
Cdd:pfam00041 2 APSNLTVTDVTSTSLTVSW----------TPPPDGNGPiTGYEVEYRPKNSGEPWNEITVPGTTTsvTLTGLKPGTEYEV 71
|
...
gi 1958666954 193 GVK 195
Cdd:pfam00041 72 RVQ 74
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
462-684 |
1.54e-04 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 46.30 E-value: 1.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 462 PKTSRTAEQPRATLAPSEASFDPrtvEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPpRVKPAPE-PETRPSAQSTKA 540
Cdd:NF033839 308 KEVKPEPETPKPEVKPQLEKPKP---EVKPQPEKPKPEVKPQLETPKPEVKPQPEKPKP-EVKPQPEkPKPEVKPQPETP 383
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 541 PPHKTKKPGRRRPKTTRSPEVPKSKPALEPATVPPEILVPTIVPKPPQRPKatrrPEAPQIQPAHEPVTFGSEAPALAIV 620
Cdd:NF033839 384 KPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQ----PEKPKPEVKPQPEKPKPEVKPQPET 459
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1958666954 621 TTTDIAPVISRTKASVttlapkSSRPRTRQRPKYKATPSPKIPQTKPDLGPITAEPSLASTTKK 684
Cdd:NF033839 460 PKPEVKPQPEKPKPEV------KPQPEKPKPDNSKPQADDKKPSTPNNLSKDKQPSNQASTNEK 517
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
454-745 |
2.12e-04 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 46.23 E-value: 2.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 454 DPILD--SVPPKTSRTAEQPRAT---LAPSEASFDPRTVEIFTSPEVRPTTAapQQTTSIPSTPKRQSTPKPPRVKPAP- 527
Cdd:PRK10263 308 DPLLNgaPITEPVAVAAAATTATqswAAPVEPVTQTPPVASVDVPPAQPTVA--WQPVPGPQTGEPVIAPAPEGYPQQSq 385
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 528 ---------EPETRPsAQSTKAPPHKTKKPGRRRPKTTRSPEVPKSKPALEPATVPPEILVPTIV--PKPPQRPKATRRP 596
Cdd:PRK10263 386 yaqpavqynEPLQQP-VQPQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAeeQQSTFAPQSTYQT 464
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 597 EAPQIQPAHEPVTFgSEAPALAIVTTTDIAPVISRTKASVTTL----APKSSRPRTRQR--------PKYKATPSPKIPQ 664
Cdd:PRK10263 465 EQTYQQPAAQEPLY-QQPQPVEQQPVVEPEPVVEETKPARPPLyyfeEVEEKRAREREQlaawyqpiPEPVKEPEPIKSS 543
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 665 TKPD----LGPITAEPSLASTTKKVRrprpkpKTTPHPEVPQTILVPATSLepvirteTPGTTLVPKLSQQPDFPHPKPK 740
Cdd:PRK10263 544 LKAPsvaaVPPVEAAAAVSPLASGVK------KATLATGAAATVAAPVFSL-------ANSGGPRPQVKEGIGPQLPRPK 610
|
....*
gi 1958666954 741 TTRSP 745
Cdd:PRK10263 611 RIRVP 615
|
|
| FN3 |
COG3401 |
Fibronectin type 3 domain [General function prediction only]; |
1201-1455 |
2.30e-04 |
|
Fibronectin type 3 domain [General function prediction only];
Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 45.76 E-value: 2.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 1201 PSSTGRNTSVDSHATRKPGLIPGTRHRHTSPRPVPPQRKPLPPNNVTGKPGSAGIISSSRATSPPLKATLKPTGTATERP 1280
Cdd:COG3401 73 AGTTSGVAAVAVAAAPPTATGLTTLTGSGSVGGATNTGLTSSDEVPSPAVGTATTATAVAGGAATAGTYALGAGLYGVDG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 1281 GAEKKQPTAPASEEEFGNTTDFSSSPTKETDPLGKPRFIGPHVRYIPKPDN----KPCSITDSVRRFPTEEATEGNATSP 1356
Cdd:COG3401 153 ANASGTTASSVAGAGVVVSPDTSATAAVATTSLTVTSTTLVDGGGDIEPGTtyyyRVAATDTGGESAPSNEVSVTTPTTP 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 1357 PqNPPTNLTVVTVEgcPSFVILDWEKPLNDTVTEYEvISRENGSfSGKNKSIQITNQTFSTVENLKPDTSYEFQVKPKNP 1436
Cdd:COG3401 233 P-SAPTGLTATADT--PGSVTLSWDPVTESDATGYR-VYRSNSG-DGPFTKVATVTTTSYTDTGLTNGTTYYYRVTAVDA 307
|
250 260
....*....|....*....|
gi 1958666954 1437 LG-EGPASNTVAFSTESADP 1455
Cdd:COG3401 308 AGnESAPSNVVSVTTDLTPP 327
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
496-750 |
2.40e-04 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 45.91 E-value: 2.40e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 496 RPTTAAPQQTTSIPSTPKRQSTPKPPRVKP--APEPET----RPSAQSTKAPPHKTKKPGRRRPKTTRSPevpkskPALE 569
Cdd:pfam03154 324 RIHTPPSQSQLQSQQPPREQPLPPAPLSMPhiKPPPTTpipqLPNPQSHKHPPHLSGPSPFQMNSNLPPP------PALK 397
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 570 PATVPPEILVPTIVPKPPQRPKATRRPEAPQIQPahepvtfgseapalAIVTTTDIAPVISRTKASVTTLAPKSSRPRTR 649
Cdd:pfam03154 398 PLSSLSTHHPPSAHPPPLQLMPQSQQLPPPPAQP--------------PVLTQSQSLPPPAASHPPTSGLHQVPSQSPFP 463
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 650 QRPKYKATPSPKIPqtkpdlgPITAEPSLASTTKKVRRPRPKPKTTPHPeVPQTilvPATSLEPVIRTETPgttlvPKLS 729
Cdd:pfam03154 464 QHPFVPGGPPPITP-------PSGPPTSTSSAMPGIQPPSSASVSSSGP-VPAA---VSCPLPPVQIKEEA-----LDEA 527
|
250 260
....*....|....*....|.
gi 1958666954 730 QQPDFPHPKPkttRSPAAPPT 750
Cdd:pfam03154 528 EEPESPPPPP---RSPSPEPT 545
|
|
| FN3 |
COG3401 |
Fibronectin type 3 domain [General function prediction only]; |
1344-1498 |
4.59e-04 |
|
Fibronectin type 3 domain [General function prediction only];
Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 44.99 E-value: 4.59e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 1344 PTEEATEGNATSPPQnPPTNLTVVTVEgcPSFVILDWEKPLNDTVTEYEV--ISRENGSFSGKNKSIqitNQTFSTVENL 1421
Cdd:COG3401 314 PSNVVSVTTDLTPPA-APSGLTATAVG--SSSITLSWTASSDADVTGYNVyrSTSGGGTYTKIAETV---TTTSYTDTGL 387
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1958666954 1422 KPDTSYEFQVKPKNPLG-EGPASNTVAFSTESADPRVSEPISAGRDAIWTERPFNSDSYSECKGKQYVKRTWYKKFVG 1498
Cdd:COG3401 388 TPGTTYYYKVTAVDAAGnESAPSEEVSATTASAASGESLTASVDAVPLTDVAGATAAASAASNPGVSAAVLADGGDTG 465
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
427-618 |
5.63e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 44.48 E-value: 5.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 427 PRTATYDVVSSSATSDETEVEPHTATSDPILDSVPPKTSRTAEQPRAtlAPSEASFDPRTVEIFTSPEVRPTTAAPQQTT 506
Cdd:PRK12323 375 ATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAA--APARRSPAPEALAAARQASARGPGGAPAPAP 452
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 507 SIPSTPKRQSTP--KPPRVKP--APEPETRPSAQSTKAPPHKTKKPGRRRPKTTRSPEVPKSKPAL---------EPATV 573
Cdd:PRK12323 453 APAAAPAAAARPaaAGPRPVAaaAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPagwvaesipDPATA 532
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 1958666954 574 PPEILVPTIVPKPPQ----RPKATRRPEAPQIQPAHE----PVTFGSEAPALA 618
Cdd:PRK12323 533 DPDDAFETLAPAPAAapapRAAAATEPVVAPRPPRASasglPDMFDGDWPALA 585
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
532-726 |
7.51e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 44.10 E-value: 7.51e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 532 RPSAQSTKA-PPHKTKKPGRRRPKTTRSPEVPKSKPALEPATVPPEILVPTivPKPPQRPKATRRPEAPQIQPAHEPVTF 610
Cdd:PRK12323 364 RPGQSGGGAgPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAA--AARAVAAAPARRSPAPEALAAARQASA 441
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 611 GSEAPALAIVTTTDIAPV--ISRTKASVTTLAPKSSRPRTRQRPKYKATPSPKIPQTKPDLGPITAEPSLASTTK----K 684
Cdd:PRK12323 442 RGPGGAPAPAPAPAAAPAaaARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAapagW 521
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 1958666954 685 VRRPRPKPKTTPhPEVPQTILVPATSLEPVIRTETPGTTLVP 726
Cdd:PRK12323 522 VAESIPDPATAD-PDDAFETLAPAPAAAPAPRAAAATEPVVA 562
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
311-671 |
7.53e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 44.39 E-value: 7.53e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 311 ALPAESKTPEVEKVAGQPVTVTPETVSRSTKPTL-----ASALDTAETALVLSEKTPETAQSVlipeselllsslapkgs 385
Cdd:PHA03307 124 ASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGAspaavASDAASSRQAALPLSSPEETARAP----------------- 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 386 pefPEAKTAFPSEKPGGSLASSEEPWVVPGAKTSEDSRVVQPRTATYDVVSSSATSDETEvephtatsdpildSVPPKTS 465
Cdd:PHA03307 187 ---SSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSE-------------SSGCGWG 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 466 RTAEQPRATLAPSEASFDPRTVEIFTSPEVRPTTAApqqttsiPSTPKRQSTPKPPRVKP-APEPETRPSAQSTKAPPHK 544
Cdd:PHA03307 251 PENECPLPRPAPITLPTRIWEASGWNGPSSRPGPAS-------SSSSPRERSPSPSPSSPgSGPAPSSPRASSSSSSSRE 323
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 545 TKKPGRRRPKTTRSPEVPKSKPALEPATVPPEILVPTIVPKPPQRPKATRRPEAPQIQPAHEPVTFGSEAPAlaivtttd 624
Cdd:PHA03307 324 SSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRARAAVA-------- 395
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 1958666954 625 iAPVISRTKASVTTlapkssRPRTRQRPKYKATPSPKIPQTKPDLGP 671
Cdd:PHA03307 396 -GRARRRDATGRFP------AGRPRPSPLDAGAASGAFYARYPLLTP 435
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
444-676 |
8.80e-04 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 43.76 E-value: 8.80e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 444 TEVEPHTATSDPIlDSVPPKTSRTAEQPratLAPSEASFD--PRTVEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTPKP- 520
Cdd:PLN03209 344 TKPVTPEAPSPPI-EEEPPQPKAVVPRP---LSPYTAYEDlkPPTSPIPTPPSSSPASSKSVDAVAKPAEPDVVPSPGSa 419
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 521 ---PRVKPAPEPETRPSAQSTKAPPHKTKKPGRRRPkttrSPEVPKSKPALEPATVP--PEILVPTIVPKPPQRPKATRR 595
Cdd:PLN03209 420 snvPEVEPAQVEAKKTRPLSPYARYEDLKPPTSPSP----TAPTGVSPSVSSTSSVPavPDTAPATAATDAAAPPPANMR 495
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 596 PEAPQIQPA--HEPVTFGSEAPALAIVTTTDIAPVISRTKASVTTLAPKSSRPRTRQRPkykATPSPKIPQTKPDLGPIT 673
Cdd:PLN03209 496 PLSPYAVYDdlKPPTSPSPAAPVGKVAPSSTNEVVKVGNSAPPTALADEQHHAQPKPRP---LSPYTMYEDLKPPTSPTP 572
|
...
gi 1958666954 674 AEP 676
Cdd:PLN03209 573 SPV 575
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
471-607 |
1.15e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 43.82 E-value: 1.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 471 PRATLAPSEAsfdprtVEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQSTKAPPHKTKKPGR 550
Cdd:PRK07764 371 ERGLLARLER------LERRLGVAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSP 444
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 1958666954 551 RRPKTTRSPEVPKSKPALEPATVPPEILVPTIVPKPPQRPKATRRPEAPQIQPAHEP 607
Cdd:PRK07764 445 AGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPA 501
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
481-576 |
1.27e-03 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 43.73 E-value: 1.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 481 SFDPRTVEIFTSPEVRPTTAAPQQTTsIPSTPKRQSTPKPPRVKPAPEPETRPSAQSTKAPPhktkKPGRRRPKTTRSPE 560
Cdd:PRK12270 24 SVDPSWREFFADYGPGSTAAPTAAAA-AAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPP----KPAAAAAAAAAPAA 98
|
90
....*....|....*.
gi 1958666954 561 VPKSKPALEPATVPPE 576
Cdd:PRK12270 99 PPAAAAAAAPAAAAVE 114
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
482-634 |
1.38e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 43.32 E-value: 1.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 482 FDPRTVEifTSPEVRPTTAAPQQTTSIPSTPkRQSTPKPPRVKPAPEPETRPSAQSTKAPPHKTKKPGRRRPKTTRSPEV 561
Cdd:PRK07994 359 FHPAAPL--PEPEVPPQSAAPAASAQATAAP-TAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGA 435
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1958666954 562 PKSKPALEPATVPPEILVPTIVPKPPQRPKATRRPEAPQIQPAHEPV-TFGSEAPALAIVTTTDIAPVISRTKA 634
Cdd:PRK07994 436 TKAKKSEPAAASRARPVNSALERLASVRPAPSALEKAPAKKEAYRWKaTNPVEVKKEPVATPKALKKALEHEKT 509
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
116-195 |
1.44e-03 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 39.40 E-value: 1.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 116 KPLQLVVGTLTPSSVFLSWgfliNPHHDWTLPSHcssdrFYTIRYREKDKE--KKWIFQLCPATETIVENLKPNTVYEFG 193
Cdd:cd00063 3 PPTNLRVTDVTSTSVTLSW----TPPEDDGGPIT-----GYVVEYREKGSGdwKEVEVTPGSETSYTLTGLKPGTEYEFR 73
|
..
gi 1958666954 194 VK 195
Cdd:cd00063 74 VR 75
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
448-599 |
1.84e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 42.93 E-value: 1.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 448 PHTATSDPildSVPPKTSRTAEQPRATLAPSEASFDPRTVEIFTSPEVRPTTAAPQQTTSIPST--------PKRQSTPK 519
Cdd:PRK07994 361 PAAPLPEP---EVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQllaarqqlQRAQGATK 437
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 520 PPRVKPAPEPETRPSAQSTKAPPHKtkkpgrrRPKTTRSPEVPKSKPALEPATVPPEILVPTIVPKPPQRPKATRRPEAP 599
Cdd:PRK07994 438 AKKSEPAAASRARPVNSALERLASV-------RPAPSALEKAPAKKEAYRWKATNPVEVKKEPVATPKALKKALEHEKTP 510
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
394-714 |
2.01e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 42.91 E-value: 2.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 394 AFPSEKPGGSLASSEEPWVVPGA--------KTSEDSRVVQPRTATYDVVSSSATSDETEVEPHTATSDPILDSVPPKTS 465
Cdd:PRK07003 357 AFEPAVTGGGAPGGGVPARVAGAvpapgaraAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATA 436
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 466 RTAEQPRATLAPSEASFDPRTVEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQSTKAPPHKT 545
Cdd:PRK07003 437 DRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAA 516
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 546 KKPGRRRPKTTRSPEVPKSKPAlepATVPP----------EILVPTIVPKPPQRpkaTRRPEAPQIQPAHEPVTFGSEAP 615
Cdd:PRK07003 517 SREDAPAAAAPPAPEARPPTPA---AAAPAaraggaaaalDVLRNAGMRVSSDR---GARAAAAAKPAAAPAAAPKPAAP 590
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 616 ALAIVTTTDIAPViSRTKASVTTLAPKSSRPRTRQRPKykatPSPKIPQTkpDLGPITAE-----------PSLASTTKK 684
Cdd:PRK07003 591 RVAVQVPTPRARA-ATGDAPPNGAARAEQAAESRGAPP----PWEDIPPD--DYVPLSADegfggpddgfvPVFDSGPDD 663
|
330 340 350
....*....|....*....|....*....|
gi 1958666954 685 VRRPrPKPKTTPHPEVPQTILVPATSLEPV 714
Cdd:PRK07003 664 VRVA-PKPADAPAPPVDTRPLPPAIPLDAI 692
|
|
| PHA03379 |
PHA03379 |
EBNA-3A; Provisional |
496-748 |
2.38e-03 |
|
EBNA-3A; Provisional
Pssm-ID: 223066 [Multi-domain] Cd Length: 935 Bit Score: 42.74 E-value: 2.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 496 RPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQSTKAPPHKTKK----PGRRRPKT--------TRSPEVPK 563
Cdd:PHA03379 410 EPTYGTPRPPVEKPRPEVPQSLETATSHGSAQVPEPPPVHDLEPGPLHDQHSmapcPVAQLPPGplqdlepgDQLPGVVQ 489
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 564 S-KPALEPATVPPEILVPTIVPKPPQRPKATRRPEAPQIQPAhEPVTfgseAPALAIVTTTDIAPvisrTKASVTTLAPK 642
Cdd:PHA03379 490 DgRPACAPVPAPAGPIVRPWEASLSQVPGVAFAPVMPQPMPV-EPVP----VPTVALERPVCPAP----PLIAMQGPGET 560
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 643 SSRPRTRQRpkYKATPSPKIPQTKPDLGPITAEPSLASTTKKVR------RPRPKPKTTP-----HPEVPQTILVPATSL 711
Cdd:PHA03379 561 SGIVRVRER--WRPAPWTPNPPRSPSQMSVRDRLARLRAEAQPYqasvevQPPQLTQVSPqqpmeYPLEPEQQMFPGSPF 638
|
250 260 270
....*....|....*....|....*....|....*...
gi 1958666954 712 EPVIRTETPGTtlVPKLSQQP-DFPHPKPKTTRSPAAP 748
Cdd:PHA03379 639 SQVADVMRAGG--VPAMQPQYfDLPLQQPISQGAPLAP 674
|
|
| FN3 |
smart00060 |
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
117-195 |
2.55e-03 |
|
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 38.36 E-value: 2.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 117 PLQLVVGTLTPSSVFLSWgflinphhdwtLPSHCSSDRFYTIRYREKDKEKKWIFQLCPA----TETIVENLKPNTVYEF 192
Cdd:smart00060 4 PSNLRVTDVTSTSVTLSW-----------EPPPDDGITGYIVGYRVEYREEGSEWKEVNVtpssTSYTLTGLKPGTEYEF 72
|
...
gi 1958666954 193 GVK 195
Cdd:smart00060 73 RVR 75
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
311-649 |
2.71e-03 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 42.25 E-value: 2.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 311 ALPAESKTPEVEKVAGQPVTV--TPETVSRSTKPTLASALDTAETALVLSEKTPETAQSVLIPESELLLSSLAPKGS--P 386
Cdd:pfam17823 129 SLPAAIAALPSEAFSAPRAAAcrANASAAPRAAIAAASAPHAASPAPRTAASSTTAASSTTAASSAPTTAASSAPATltP 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 387 EFPEAKTAFPSEKPGGSLASSEEPWVVPGAKTSEDSRVVQPRTATYDVVSSSATSDETEVEPHTatSDPILDSVPP-KTS 465
Cdd:pfam17823 209 ARGISTAATATGHPAAGTALAAVGNSSPAAGTVTAAVGTVTPAALATLAAAAGTVASAAGTINM--GDPHARRLSPaKHM 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 466 RTAEQPRATLAPSEASFDPRTVEIFTSPEVRPT----TAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQSTKAP 541
Cdd:pfam17823 287 PSDTMARNPAAPMGAQAQGPIIQVSTDQPVHNTagepTPSPSNTTLEPNTPKSVASTNLAVVTTTKAQAKEPSASPVPVL 366
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 542 PhktkkpgrrrpkTTRSPEVPKSKPALEPATVPPeilvptivpkppqrpkaTRRPEAPQIQPAHEPVtfGSEAPAlaivt 621
Cdd:pfam17823 367 H------------TSMIPEVEATSPTTQPSPLLP-----------------TQGAAGPGILLAPEQV--ATEATA----- 410
|
330 340
....*....|....*....|....*...
gi 1958666954 622 TTDIAPVISRTKASVTTLAPKSSRPRTR 649
Cdd:pfam17823 411 GTASAGPTPRSSGDPKTLAMASCQLSTQ 438
|
|
| NESP55 |
pfam06390 |
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian ... |
436-568 |
2.97e-03 |
|
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian neuroendocrine-specific golgi protein P55 (NESP55) sequences. NESP55 is a novel member of the chromogranin family and is a soluble, acidic, heat-stable secretory protein that is expressed exclusively in endocrine and nervous tissues, although less widely than chromogranins.
Pssm-ID: 115071 [Multi-domain] Cd Length: 261 Bit Score: 41.39 E-value: 2.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 436 SSSATSDETEVEPHTATSDPILDSVPPKTSrtAEQPRATLAPSEASFDPRTVEIFTSPEVRPTTAAP---QQTTSIPSTP 512
Cdd:pfam06390 122 PESDIESETEFETEPETEPDTAPTTEPETE--PEDEPGPVVPKGATFHQSLTERLHALKLQSADASPrraPPSTQEPESA 199
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 513 KRQSTPKPPRVKPAP-EPETRPSA-QSTKAPPH--KTKKPGRRRPKttrSPEVPKSKPAL 568
Cdd:pfam06390 200 REGEEPERGPLDKDPrDPEEEEEEkEEEKQQPHrcKPKKPARRRDP---SPESPPKKGAI 256
|
|
| PHA03377 |
PHA03377 |
EBNA-3C; Provisional |
519-710 |
3.04e-03 |
|
EBNA-3C; Provisional
Pssm-ID: 177614 [Multi-domain] Cd Length: 1000 Bit Score: 42.35 E-value: 3.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 519 KPPRVKPAPEPETRPSAQSTKAPPHKTKKPGR-----RRPKTTRSPEVPKSKPALEPATVPpeilvPTIVPKPPQRPKAT 593
Cdd:PHA03377 414 RKPRTLPWPTPKTHPVKRTLVKTSGRSDEAEQaqstpERPGPSDQPSVPVEPAHLTPVEHT-----TVILHQPPQSPPTV 488
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 594 rrpeapQIQPAHEPVTFGSEApalAIVTTTDIAPVISRTKASVTTLAPKSSRPRTRQ--------RPKYKATPSPKIPQ- 664
Cdd:PHA03377 489 ------AIKPAPPPSRRRRGA---CVVYDDDIIEVIDVETTEEEESVTQPAKPHRKVqdgfqrsgRRQKRATPPKVSPSd 559
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 1958666954 665 ------TKPDLGPITAEPSLASTTKKVRRPRPKPKTTPHPEVPQTILVPATS 710
Cdd:PHA03377 560 rgppkaSPPVMAPPSTGPRVMATPSTGPRDMAPPSTGPRQQAKCKDGPPASG 611
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
414-768 |
3.05e-03 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 42.45 E-value: 3.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 414 PGAKTSEDSRVVQPRTATYDVVSSSATSDETEVEPHTATSDPILDSVPPKTSRTAEQPRATLAPSEASFDPRTVEIFTSP 493
Cdd:pfam03154 188 PPGTTQAATAGPTPSAPSVPPQGSPATSQPPNQTQSTAAPHTLIQQTPTLHPQRLPSPHPPLQPMTQPPPPSQVSPQPLP 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 494 EVRPTTAAPQQTTSIPSTPKRQSTPKPPRvkpaPEPETRPSAQSTKAPPHKTKKPG--RRRPKTTRS-PEVPKSKPALEP 570
Cdd:pfam03154 268 QPSLHGQMPPMPHSLQTGPSHMQHPVPPQ----PFPLTPQSSQSQVPPGPSPAAPGqsQQRIHTPPSqSQLQSQQPPREQ 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 571 ATVPPEILVPTIVPKP----PQRPKATRRPEAPQIQpAHEPVTFGSEAPalaivtttdiAPVISRTKASVTTLAPKSSRP 646
Cdd:pfam03154 344 PLPPAPLSMPHIKPPPttpiPQLPNPQSHKHPPHLS-GPSPFQMNSNLP----------PPPALKPLSSLSTHHPPSAHP 412
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 647 RTRQ-RPKYKATPSPkiPQTKPDLGPITAEPSLASTTKKVRRPRPKPKTTPHPEVPQTILVPATSLEPvirtetpgttLV 725
Cdd:pfam03154 413 PPLQlMPQSQQLPPP--PAQPPVLTQSQSLPPPAASHPPTSGLHQVPSQSPFPQHPFVPGGPPPITPP----------SG 480
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 1958666954 726 PKLSQQPDFPHPKPKTTRSPAAPPTELVSTTVFEPVIPLKEDP 768
Cdd:pfam03154 481 PPTSTSSAMPGIQPPSSASVSSSGPVPAAVSCPLPPVQIKEEA 523
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
492-604 |
3.39e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 42.23 E-value: 3.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 492 SPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQSTKAPPHKTKKPGRRRPKTTRSPEVPKSKPALEPA 571
Cdd:PHA03247 379 SLPTRKRRSARHAATPFARGPGGDDQTRPAAPVPASVPTPAPTPVPASAPPPPATPLPSAEPGSDDGPAPPPERQPPAPA 458
|
90 100 110
....*....|....*....|....*....|...
gi 1958666954 572 TVPPEILVPTIVPKPPQRPKATRRPEAPQIQPA 604
Cdd:PHA03247 459 TEPAPDDPDDATRKALDALRERRPPEPPGADLA 491
|
|
| Not5 |
COG5665 |
CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription]; |
308-782 |
3.66e-03 |
|
CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription];
Pssm-ID: 444384 [Multi-domain] Cd Length: 874 Bit Score: 41.96 E-value: 3.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 308 ETLALPAESKTPEVEKVAGQpvtvTPETVSRSTKPTLASaldtaeTALVLSEKTPETAQSVLIPESELLLSSLAPKGS-- 385
Cdd:COG5665 102 EPLGRLVASTGLNASGVSAN----SAATIAPGANATLTS------SAGADSLQASSEMALWGPRRVALVVRDGASNPVav 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 386 -PEFPEAKTAFPSEKPGGSLASseepwvVPGAKTSEDSrvvQPRTATYDVVSSSATSDETEVEP-------HTATSDPIL 457
Cdd:COG5665 172 vVTTMIAVPSAPAAPPNAVDYS------VLVPIAAQDP---AASVSTPQAFNASATSGRSQHIVqaakrvgVEWWGDPSL 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 458 DSVPPKTSRTAEQPRATLAPSEASFDPRTVEIFTSPEVR--------------PTTAAPQQTTSIPSTPKRQSTPKPPRV 523
Cdd:COG5665 243 LATPPATPATEEKSSQQPKSQPTSPSGGTTPPSTNQLTTsntptstakaqpqpPTKKQPAKEPPSDTASGNPSAPSVLIN 322
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 524 KPAPEPETRPSAQSTKAPPHKTKKPGRRRPKTTRSPEVPKSKPALEPATVPPEIlvpTIVPKPPQRPKATRRPEAPQIQP 603
Cdd:COG5665 323 SDSPTSEDPATASVPTTEETTAFTTPSSVPSTPAEKDTPATDLATPVSPTPPET---SVDKKVSPDSATSSTKSEKEGGT 399
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 604 AHEPVTFGSEAPALAIVTTTDIAPVISRTKASVTTLAPKSSRPRTRQRPkyKATPSPKIPqtkpdlgpitaePSLASTTK 683
Cdd:COG5665 400 ASSPMPPNIAIGAKDDVDATDPSQEAKEYTKNAPMTPEADSAPESSVRT--EASPSAGSD------------LEPENTTL 465
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 684 KVRRPRPKPKTTPHPEVPQTILVPATSLEPVIRTETPGTTLVPKLSQQ--PDFPHPKPKTTRSPAAPPTELVSttvfepv 761
Cdd:COG5665 466 RDPAPNAIPPPEDPSTIGRLSSGDKLANETGPPVIRRDSTPSSTADQSivGVLAFGLDQRTQAEISVEAASRS------- 538
|
490 500
....*....|....*....|.
gi 1958666954 762 IPLKEDPVTTIVPFTDLEPAT 782
Cdd:COG5665 539 NPLLNSQVKSFPLGKRSEGAK 559
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
604-847 |
3.79e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 42.14 E-value: 3.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 604 AHEP-VTFGSEAPALAIVTTTDIAPVISRTKASVTTLAPKSSRPRTRQRPKYKATPSPKIPQTKPDLGPITAEPSLASTT 682
Cdd:PRK07003 357 AFEPaVTGGGAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATA 436
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 683 KKVRRPRPKPKTTPHPEVPQTilvpATSLEPVIRTETPGTTLVPKLSQQPDFPHPKPKTTRSPAAPPTELVSTTVFEPVI 762
Cdd:PRK07003 437 DRGDDAADGDAPVPAKANARA----SADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARA 512
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 763 PLKEDPVTTIVPFTDLEPATDLETPVAfRTEAPRTTLASKKSQ--RTRRPRPRPPKATLSPQAPKTKTVPAVVLEPVTLR 840
Cdd:PRK07003 513 PAAASREDAPAAAAPPAPEARPPTPAA-AAPAARAGGAAAALDvlRNAGMRVSSDRGARAAAAAKPAAAPAAAPKPAAPR 591
|
....*..
gi 1958666954 841 PEVQVTT 847
Cdd:PRK07003 592 VAVQVPT 598
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
462-618 |
4.09e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 41.77 E-value: 4.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 462 PKTSRTA-EQPRATLAPSEASfdPRTVEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQSTKA 540
Cdd:PRK07994 361 PAAPLPEpEVPPQSAAPAASA--QATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKA 438
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 541 PPHKTKKPGRRRPKTT---RSPEVPKSKPALEPATVPPEILVPTIVPKPPQRPKATRRPEAPQIQPAHEPvtfgseAPAL 617
Cdd:PRK07994 439 KKSEPAAASRARPVNSaleRLASVRPAPSALEKAPAKKEAYRWKATNPVEVKKEPVATPKALKKALEHEK------TPEL 512
|
.
gi 1958666954 618 A 618
Cdd:PRK07994 513 A 513
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1023-1362 |
4.28e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 41.85 E-value: 4.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 1023 PHSRRPAKEQVPkgslhttSKPKMPPSPEVvditsvpkdeqlSHKPDPEVSQSETVLPPVTFRVEPPKTTIVP------- 1095
Cdd:PHA03247 2478 PVYRRPAEARFP-------FAAGAAPDPGG------------GGPPDPDAPPAPSRLAPAILPDEPVGEPVHPrmltwir 2538
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 1096 ----LETRDI----PLIPVISPRPSeeelqttmeqTDQSTQElfTTKIPRTTELAKTTQAphrlhttpVRPRIPERPhGR 1167
Cdd:PHA03247 2539 gleeLASDDAgdppPPLPPAAPPAA----------PDRSVPP--PRPAPRPSEPAVTSRA--------RRPDAPPQS-AR 2597
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 1168 PalnkTTTRPDRTKSRGMSHKNGVGPGTKQTPKPSSTGRntsvdSHATRKPGlipgtrhRHTSPRPVPPQRKPLPPNNVT 1247
Cdd:PHA03247 2598 P----RAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPS-----PAANEPDP-------HPPPTVPPPERPRDDPAPGRV 2661
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 1248 GKPGSAGIISSSRATSPPLKATLKPTGTATERPGAEKKQPTAPASEEEFGNTTDFSSSPTKETDPLGKPRFIGPHVRYIP 1327
Cdd:PHA03247 2662 SRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAP 2741
|
330 340 350
....*....|....*....|....*....|....*.
gi 1958666954 1328 KPDNKPCSITDSVRRFPTEEATEG-NATSPPQNPPT 1362
Cdd:PHA03247 2742 PAVPAGPATPGGPARPARPPTTAGpPAPAPPAAPAA 2777
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
897-1111 |
4.66e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 41.79 E-value: 4.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 897 APKTPKRTHRVRPKPKTTTPEAPLTKPVAAtdlesSALSTEVPTTVVLTTALVPATLRTKSPKTTLAPSVQRTRRPRPRP 976
Cdd:PRK12323 373 GPATAAAAPVAQPAPAAAAPAAAAPAPAAP-----PAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGA 447
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 977 KTTARTDVSESKSvsddlelvAFSTESPQKTIAPRQTTSPPPKLKPPHSRRPAKEQVPKGSlhttSKPKMPPSPEVVDIT 1056
Cdd:PRK12323 448 PAPAPAPAAAPAA--------AARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWE----ELPPEFASPAPAQPD 515
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 1958666954 1057 SVPKDEQLSHKPDPEVSQsetvlPPVTFRVEPPKTTIVPLETRDIPLIPVISPRP 1111
Cdd:PRK12323 516 AAPAGWVAESIPDPATAD-----PDDAFETLAPAPAAAPAPRAAAATEPVVAPRP 565
|
|
| PHA03377 |
PHA03377 |
EBNA-3C; Provisional |
416-647 |
5.26e-03 |
|
EBNA-3C; Provisional
Pssm-ID: 177614 [Multi-domain] Cd Length: 1000 Bit Score: 41.58 E-value: 5.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 416 AKTSEDSRVvQPRTATYDVVSSSATSDETEVEPHTATSDPILDSVPPKTS--RTAEQPRATLAPSEASFDPRTVEI---- 489
Cdd:PHA03377 698 AQPSEESHL-SSMSPTQPISHEEQPRYEDPDDPLDLSLHPDQAPPPSHQApySGHEEPQAQQAPYPGYWEPRPPQApylg 776
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 490 FTSPEVRPTTAAPQQTTSIPSTPKRQS-----------------------TPKPPRVKPAPEPETRPSAQSTKAPPHKTK 546
Cdd:PHA03377 777 YQEPQAQGVQVSSYPGYAGPWGLRAQHpryrhswaywsqypghghpqgpwAPRPPHLPPQWDGSAGHGQDQVSQFPHLQS 856
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 547 KPGRRRPKTTRSPEVPKSKPaLEPATVPPEILVPtivPKPPQRPKATRRPEAPqiQPAHEPVTFGSEAPALAIVTTTDIA 626
Cdd:PHA03377 857 ETGPPRLQLSQVPQLPYSQT-LVSSSAPSWSSPQ---PRAPIRPIPTRFPPPP--MPLQDSMAVGCDSSGTACPSMPFAS 930
|
250 260
....*....|....*....|.
gi 1958666954 627 PVISRTKASVTTLAPKSSRPR 647
Cdd:PHA03377 931 DYSQGAFTPLDINAQTPKRPR 951
|
|
| dnaA |
PRK14086 |
chromosomal replication initiator protein DnaA; |
451-654 |
5.46e-03 |
|
chromosomal replication initiator protein DnaA;
Pssm-ID: 237605 [Multi-domain] Cd Length: 617 Bit Score: 41.35 E-value: 5.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 451 ATSDPILDSVPPKTsrtaEQPRATLAPSEASFDPRTVEIFTSPE---VRPTTA-APQQTTSIPSTPKRQSTPKP---PRv 523
Cdd:PRK14086 86 ITVDPSAGEPAPPP----PHARRTSEPELPRPGRRPYEGYGGPRaddRPPGLPrQDQLPTARPAYPAYQQRPEPgawPR- 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 524 KPAPEPETRPSAQSTKAPPHKTKKPGRRRPKTTRSPEvPKSKPALEPATVPPEilvptiVPKPPQRPKATRRPEAPQIQP 603
Cdd:PRK14086 161 AADDYGWQQQRLGFPPRAPYASPASYAPEQERDREPY-DAGRPEYDQRRRDYD------HPRPDWDRPRRDRTDRPEPPP 233
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 1958666954 604 -AHEPVTFGSEAPALAIVTTTDIAPVISRTKASVTTLAPKSSRPRTRQRPKY 654
Cdd:PRK14086 234 gAGHVHRGGPGPPERDDAPVVPIRPSAPGPLAAQPAPAPGPGEPTARLNPKY 285
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
458-541 |
6.19e-03 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 39.99 E-value: 6.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 458 DSVPPKTSRTAEQP--------RATLAPSEASFDPRTVEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEP 529
Cdd:PRK11633 54 DMMPAATQALPTQPpegaaeavRAGDAAAPSLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQKVEAPPAPKP 133
|
90
....*....|..
gi 1958666954 530 ETRPSAQSTKAP 541
Cdd:PRK11633 134 EPKPVVEEKAAP 145
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
1002-1231 |
6.61e-03 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 41.21 E-value: 6.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 1002 ESPQKTIAPRQTTSPPPKLKPPHSRRPAKEQVPKgslhttsKPKMPPSPEvvditsVPKDEQLSHK-----PDPEVSQSE 1076
Cdd:PTZ00449 622 KSPKRPESPKSPKRPPPPQRPSSPERPEGPKIIK-------SPKPPKSPK------PPFDPKFKEKfyddyLDAAAKSKE 688
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 1077 TVlppVTFRVEPPKTTIVPLETRDIPLIPVISPRPSEEELQTTMEQTDQSTQELFTTKIPRTTELAKTTQAPHRLHTTPV 1156
Cdd:PTZ00449 689 TK---TTVVLDESFESILKETLPETPGTPFTTPRPLPPKLPRDEEFPFEPIGDPDAEQPDDIEFFTPPEEERTFFHETPA 765
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1958666954 1157 RPRIPErphgrpALNKTTTRPDRTKSRGMSHKNGVGPGTKQTPKPSSTGRNTSVDSHATRKPGLIPGTRHRHTSP 1231
Cdd:PTZ00449 766 DTPLPD------ILAEEFKEEDIHAETGEPDEAMKRPDSPSEHEDKPPGDHPSLPKKRHRLDGLALSTTDLESDA 834
|
|
| GGN |
pfam15685 |
Gametogenetin; GGN is a family of proteins largely found in mammals. It reacts with POG in the ... |
500-695 |
7.43e-03 |
|
Gametogenetin; GGN is a family of proteins largely found in mammals. It reacts with POG in the maturation of sperm and is expressed virtually only in the testis. It is found to be associated with the intracellular membrane, binds with GGNBP1 and may be involved in vesicular trafficking.
Pssm-ID: 434857 [Multi-domain] Cd Length: 668 Bit Score: 40.91 E-value: 7.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 500 AAPQQTTSIPSTPkrQSTPKPPRVKPAPEPETRPSAQSTKAPP------HKTKKPGRRRPKTTRS--PEVPKSKPALEPA 571
Cdd:pfam15685 377 GAPRRRAAALSGP--WGSPPPPPGKAHPIPGPRRPAPALLAPPmfifpaPTNGEPVRPGPPAPQAllPRPPPPTPPATPP 454
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 572 TVPPEIlvpTIVPKPPQRPKATRRPEAPQIQPAH-EPVTFGSEAPAL--AIVTTTDIAPVISRTKASVTTLAPKSSRPrt 648
Cdd:pfam15685 455 PVPPPI---PQLPALQPMPLAAARPPTPRPCPGHgESALAPAPTAPLppALAADQAPAPALAAAPAPSPAPAPATADP-- 529
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 1958666954 649 rqrpkYKATPSPKIPQTKPDLGPITAEPSLASTTKKVRRPRPKPKTT 695
Cdd:pfam15685 530 -----LPPAPAPIKARTRKNKGPRAARGATREDGAPGDGPREKTAAT 571
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
509-702 |
9.07e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 40.74 E-value: 9.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 509 PSTPKRQSTPKPPRVKPAPEPETRPSAQSTKAPPHKTKKPGRRRPKTTRSPEVPKSKPALEPATVPPEILVPTIVPKPPQ 588
Cdd:PRK07764 591 APGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWP 670
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958666954 589 RPKATRRPEAPQIQPAHEPVTFGSEAPALAIVTTTDIAPVISRTKASVTTLAPKSSRPRTRQRPKYKATPSPkipqTKPD 668
Cdd:PRK07764 671 AKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLP----PEPD 746
|
170 180 190
....*....|....*....|....*....|....
gi 1958666954 669 LGPITAEPSLASTTKKVRRPRPKPKTTPHPEVPQ 702
Cdd:PRK07764 747 DPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPS 780
|
|
| |
