|
Name |
Accession |
Description |
Interval |
E-value |
| FAM184 |
pfam15665 |
Family with sequence similarity 184, A and B; The function of FAM184 is not known. |
57-267 |
8.17e-68 |
|
Family with sequence similarity 184, A and B; The function of FAM184 is not known.
Pssm-ID: 464788 [Multi-domain] Cd Length: 211 Bit Score: 226.08 E-value: 8.17e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 57 VIYALNTKNDEHDSAIQALKDAHEEEIQQILAETREKILLYKSRVTEELDLKRKIQVLEASLEDHVKMKQEALKEFEAYK 136
Cdd:pfam15665 1 VIYALNTKNDEHEAEIQALKEAHEEEIQQILAETREKILQYKSKIGEELDLKRRIQTLEESLEQHERMKRQALTEFEQYK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 137 RRVEDMQLCAEAQHVQRIVTMSREVEEIRKKFEERLRSFGQLQVQFENDKQSALEELRTTHRLEVQELLRSQEDHSASMN 216
Cdd:pfam15665 81 RRVEERELKAEAEHRQRVVELSREVEEAKRAFEEKLESFEQLQAQFEQEKRKALEELRAKHRQEIQELLTTQRAQSASSL 160
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 1958759141 217 LGQEKAEELHRREVEALNNTLEELRLEKKELIEEYEGKLSKAQLFYERELD 267
Cdd:pfam15665 161 AEQEKLEELHKAELESLRKEVEDLRKEKKKLAEEYEQKLSKAQAFYERELE 211
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
226-995 |
5.42e-12 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 70.47 E-value: 5.42e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 226 HRREVEALNNTLEELRLEKKEL---IEEYEGKLSKAQL-FYEREldnlKRSQLFTAESLQASRDKEadlrkEFQGQEAIL 301
Cdd:TIGR02168 237 LREELEELQEELKEAEEELEELtaeLQELEEKLEELRLeVSELE----EEIEELQKELYALANEIS-----RLEQQKQIL 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 302 RKTIGKLKTELQMVQDEASSLLDKCQKLQMALATAENNVQVLQKQLDDAKEGEMALLSKHKEVESELAAARERLQEQASD 381
Cdd:TIGR02168 308 RERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSK 387
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 382 LVRKASHIGMLQATQMTQEVTIKDLESEKSRAHERLCQLEKERAFLQSRTQSLDEEQKQQELEMEKKVNEVKRTQQEYYE 461
Cdd:TIGR02168 388 VAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELR 467
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 462 MELKNLQTRLEGEVAQLNETHGK-----TLEELAWKHHMAIEAVHSNASRDKIKLQTELEEQHKKEKLSLEedknqlqLE 536
Cdd:TIGR02168 468 EELEEAEQALDAAERELAQLQARldsleRLQENLEGFSEGVKALLKNQSGLSGILGVLSELISVDEGYEAA-------IE 540
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 537 L---ENLKQALGDKLTSANQEIDRLQD----------LVRKSEQGLGSAEGLIASLQDSQERLQSELDLTKGRLKETKDA 603
Cdd:TIGR02168 541 AalgGRLQAVVVENLNAAKKAIAFLKQnelgrvtflpLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSY 620
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 604 LL-------NVEAELQQERHEHEQTLATMKEEEKLRVDRM---AHDLEIKWTENLRQECSKLRQELKLQheedkkcamsq 673
Cdd:TIGR02168 621 LLggvlvvdDLDNALELAKKLRPGYRIVTLDGDLVRPGGVitgGSAKTNSSILERRREIEELEEKIEEL----------- 689
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 674 llQLKEREKTAARDSWQKKVEDLLNQRHSLGEALHKSINNISLLKQNLElqlcQSQTSLQQLQAQFTQERQRLTQELEEL 753
Cdd:TIGR02168 690 --EEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLA----RLEAEVEQLEERIAQLSKELTELEAEI 763
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 754 EEQHQQRHKSLKEAHVLafqtmEEEKEKEQRalethLQQKHSAELQSLKDAHRESMEGFRvEMEQELQTLRFELEDEGKA 833
Cdd:TIGR02168 764 EELEERLEEAEEELAEA-----EAEIEELEA-----QIEQLKEELKALREALDELRAELT-LLNEEAANLRERLESLERR 832
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 834 MlASLRSELNHQHATSIDLlrhSHHQELAAAKME-LERSIDISRRQSKEHMCRISDLQDELRHREHHITDLDKEVQHLHE 912
Cdd:TIGR02168 833 I-AATERRLEDLEEQIEEL---SEDIESLAAEIEeLEELIEELESELEALLNERASLEEALALLRSELEELSEELRELES 908
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 913 SISTLTKELELKGKEILRIRSESnQQMRLHEQDLNKRLEKELDVMTADHLREKNIMRADFNKTNELLKEINAALQ----V 988
Cdd:TIGR02168 909 KRSELRRELEELREKLAQLELRL-EGLEVRIDNLQERLSEEYSLTLEEAEALENKIEDDEEEARRRLKRLENKIKelgpV 987
|
....*..
gi 1958759141 989 SLEDMEE 995
Cdd:TIGR02168 988 NLAAIEE 994
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
403-928 |
7.49e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 66.50 E-value: 7.49e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 403 IKDLESEKSRAHERLCQLEKERAFLQSRTQSLDEEQKQQELEMEKKVNEVKRTQQEYYEmeLKNLQTRLEGEVAQLNETH 482
Cdd:COG1196 234 LRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYE--LLAELARLEQDIARLEERR 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 483 ---GKTLEELAWKHHmAIEAVHSNASRDKIKLQTELEEQhKKEKLSLEEDKNQLQLELENLKQALGDKLTSANQEIDRLQ 559
Cdd:COG1196 312 relEERLEELEEELA-ELEEELEELEEELEELEEELEEA-EEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELL 389
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 560 DLVRKSEQGLGSAEGLIASLQDSQERLQSELDLTKGRLKETKDALLNVEAELQQERHEHEQTLATMKEEEKLRVDRMAHD 639
Cdd:COG1196 390 EALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELL 469
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 640 LEIKWTENLRQECSKLRQELKLQHEEDKKCAMSQLLQLKEREKTAARDSWQKKVEDLLNQRH-----------SLGEALH 708
Cdd:COG1196 470 EEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGveaayeaaleaALAAALQ 549
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 709 KSINN--------ISLLKQNLELQLCQSQTSLQQLQAQFTQERQRLTQELEELEEQHQQRHKSLKEAHV---LAFQTMEE 777
Cdd:COG1196 550 NIVVEddevaaaaIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLgdtLLGRTLVA 629
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 778 E-KEKEQRALETHLQQKHSAELQSLKDAHRESMEGFRVEMEQELQTLRFELEDEGKAMLASLRSELNHQHATSIDLLRHS 856
Cdd:COG1196 630 ArLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEEREL 709
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1958759141 857 HHQELAAAKMELERSIDISRRQSKEHMCRISDLQDELRHREHHITDLDKEvqhlhESISTLTKELELKGKEI 928
Cdd:COG1196 710 AEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEP-----PDLEELERELERLEREI 776
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
301-920 |
1.13e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 65.73 E-value: 1.13e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 301 LRKTIGKLKTELQMVQDEASSLLDKCQKLQMALATAENNVQVLQKQLDDAKEGEMALLSKHKEVESELAAARERLQEQAS 380
Cdd:COG1196 237 LEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEE 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 381 DLVRKASHIGMLQATQMTQEVTIKDLESEKSRAHERLCQLEKERAFLQSRTQSLDEEQKQQELEMEKKVNEVKRTQQEyy 460
Cdd:COG1196 317 RLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRA-- 394
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 461 EMELKNLQTRLEGEVAQLNETHGKTLEELAwkhhmaieavhsnASRDKIKLQTELEEQHKKEKLSLEEDKNQLQLELENL 540
Cdd:COG1196 395 AAELAAQLEELEEAEEALLERLERLEEELE-------------ELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEAL 461
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 541 KQALGDKLTSANQEIDRLQDLVRKSEQGLGSAEGLIASLQDSQERLQSELDLTKGRLKETKDALLNVEAELQQERHEHEQ 620
Cdd:COG1196 462 LELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALE 541
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 621 TLATMKEEEKLRVDRMAHDLEIKWTENLRQECSKLRQELKLQHEEDKKCAMSQLLQLKEREKTAARDSWQKKVEDLLNQR 700
Cdd:COG1196 542 AALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDT 621
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 701 HSLGEALHKSINNISLLKQNLELQLCQSQTSLQQLQAQFTQERQRLTQELEELEEQHQQRHKSLKEAHVLAFQTMEEEKE 780
Cdd:COG1196 622 LLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLA 701
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 781 KEQRALETHLQQKHSAELQSLKDAHRESMEGFRVEMEQELQTLRFELEDEGKAMLASLrselnhqhaTSIDLLRhshhQE 860
Cdd:COG1196 702 EEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEP---------PDLEELE----RE 768
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1958759141 861 LAAAKMELER-------SIDISRRQSKEHmcrisdlqDELRHRehhITDLDKEVQHLHESISTLTKE 920
Cdd:COG1196 769 LERLEREIEAlgpvnllAIEEYEELEERY--------DFLSEQ---REDLEEARETLEEAIEEIDRE 824
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
71-599 |
1.01e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 62.65 E-value: 1.01e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 71 AIQALKDAHEEEIQQILAETREKILLYKSRVTEELDLKRKIQVLEASLEDHVKMKQEALKEFEAYKRRVEDMQLcAEAQH 150
Cdd:COG1196 257 ELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEE-ELEEL 335
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 151 VQRIVTMSREVEEIRKKFEERLRSFGQLQVQFENDKQSALEELRTTHRLEVQEL-LRSQEDHSASMNLGQEKAEELHRRE 229
Cdd:COG1196 336 EEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLeALRAAAELAAQLEELEEAEEALLER 415
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 230 VEALNNTLEELRLEKKELIEEYEgKLSKAQLFYERELDNLKRSQLFTAESLQASRDKEADLRKEFQGQEAILRKTIGKLK 309
Cdd:COG1196 416 LERLEEELEELEEALAELEEEEE-EEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLL 494
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 310 TELQMVQDEASSLLDKcqKLQMALATAENNVQVLQKQLDDAKEGEMALlskhkeVESELAAARERLQEQASDLVRKASHI 389
Cdd:COG1196 495 LLLEAEADYEGFLEGV--KAALLLAGLRGLAGAVAVLIGVEAAYEAAL------EAALAAALQNIVVEDDEVAAAAIEYL 566
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 390 GMLQATQMTQEVTIKDLESEKSRAHERLCQLEKERAFLQSRTQSLDEEQKQQELEMEKKVNEVKRTQQEYYEMELKNLQT 469
Cdd:COG1196 567 KAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRL 646
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 470 RLEGEVAQLNETHGKTLEELAWKHHMAIEAVHSNASRDKIKLQTELEEQHKKEKLSLEEDKNQLQLELENLKQAL--GDK 547
Cdd:COG1196 647 REVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELeeEAL 726
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|..
gi 1958759141 548 LTSANQEIDRLQDLVRKSEQGLGSAEGLIASLQDSQERLQSELDLTKGRLKE 599
Cdd:COG1196 727 EEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEA 778
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
44-722 |
1.33e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 62.38 E-value: 1.33e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 44 HLKMSKKIAQLTKVIYALNtkndehdsaiqALKDAHEEEIQQILAETREKILLYKSRVTEELDLKRKIQVLEASLEDHVK 123
Cdd:TIGR02168 276 VSELEEEIEELQKELYALA-----------NEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEE 344
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 124 MKQEALKEFEAYKRRVEDMQLCAEAQHvQRIVTMSREVEEIRKKFEERLRSFGQLQVQFEN--DKQSALEELRTTHRLEV 201
Cdd:TIGR02168 345 KLEELKEELESLEAELEELEAELEELE-SRLEELEEQLETLRSKVAQLELQIASLNNEIERleARLERLEDRRERLQQEI 423
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 202 QELLRSQedhsasmnlgQEKAEELHRREVEALNNTLEELRLEKKELIEEYEgKLSKAQLFYERELDNLKRSqlftAESLQ 281
Cdd:TIGR02168 424 EELLKKL----------EEAELKELQAELEELEEELEELQEELERLEEALE-ELREELEEAEQALDAAERE----LAQLQ 488
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 282 ASRDKEADLRKEFQG-QEAIlrKTIGKLKTELQMVQDEASSLLDKCQKLQMALATA--ENNVQVLQKQLDDAKEGeMALL 358
Cdd:TIGR02168 489 ARLDSLERLQENLEGfSEGV--KALLKNQSGLSGILGVLSELISVDEGYEAAIEAAlgGRLQAVVVENLNAAKKA-IAFL 565
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 359 SKHK------------------EVESELAAARERLQEQASDLVRKASHI-----GMLQATQMTQEVTIKDLESEKSRAHE 415
Cdd:TIGR02168 566 KQNElgrvtflpldsikgteiqGNDREILKNIEGFLGVAKDLVKFDPKLrkalsYLLGGVLVVDDLDNALELAKKLRPGY 645
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 416 RLCQLE---------------KERAFLQSRTQSLDEEQKQQElEMEKKVNEVKRTQQEYYEmELKNLQTRLEGEVAQLNE 480
Cdd:TIGR02168 646 RIVTLDgdlvrpggvitggsaKTNSSILERRREIEELEEKIE-ELEEKIAELEKALAELRK-ELEELEEELEQLRKELEE 723
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 481 ThgktleelawkhhmaieavhsnasRDKIKLQTELEEQHKKEKLSLEEDKNQLQLELENLKQalgdKLTSANQEIDRLQD 560
Cdd:TIGR02168 724 L------------------------SRQISALRKDLARLEAEVEQLEERIAQLSKELTELEA----EIEELEERLEEAEE 775
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 561 LVRKSEQGLGSAEGLIASLQDSQERLQSELDLTKGRLKETKDALLNVEAELQQERHEHEQTLATMKEEEKlRVDRMAHDL 640
Cdd:TIGR02168 776 ELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEE-QIEELSEDI 854
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 641 EI--KWTENLRQECSKLRQELK-LQHEEDKKCAMSQLLQLKEREKTAARDSWQKKVEDLLNQRHSLGEALHKSINNISLL 717
Cdd:TIGR02168 855 ESlaAEIEELEELIEELESELEaLLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGL 934
|
....*
gi 1958759141 718 KQNLE 722
Cdd:TIGR02168 935 EVRID 939
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
82-920 |
1.96e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 62.00 E-value: 1.96e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 82 EIQQILAETREKILLYKSRVTEELDLKRKIQVLEASLEDHVKMKQEALKEFEAYKRRVEDmqlcaeaqHVQRIVTMSREV 161
Cdd:TIGR02168 233 RLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYA--------LANEISRLEQQK 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 162 EEIRKKFEERLRSFGQLQVQFENDKQSALEELRTTHRLEVQ--ELLRSQEDHSASMNLGQEKAEELHRReVEALNNTLEE 239
Cdd:TIGR02168 305 QILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKleELKEELESLEAELEELEAELEELESR-LEELEEQLET 383
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 240 LRLEKKELIEEyEGKLSKAQLFYERELDNLKRS-QLFTAESLQASRDKEADLRKEFQGQEAILRKTIGKLKTELQMVQDE 318
Cdd:TIGR02168 384 LRSKVAQLELQ-IASLNNEIERLEARLERLEDRrERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEA 462
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 319 ASSLLDKCQKLQMALATAENNVQVLQKQLDDAKEGEMALLSKHKEVESELAAARER--LQEQASDLVRKAShiGMLQATQ 396
Cdd:TIGR02168 463 LEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLsgILGVLSELISVDE--GYEAAIE 540
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 397 MT-----QEVTIKDLESEKsRAHERLCQLEKERAFLQSRTQSLDEEQKQQELEMEKKVNEVKRTQQE--YYEMELKNL-- 467
Cdd:TIGR02168 541 AAlggrlQAVVVENLNAAK-KAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDlvKFDPKLRKAls 619
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 468 --------QTRLEGEVAQLNETHGK----TLEELAWKHHMAIEAVHSNASRDKIKLQTELEEqhkkeklsLEEDKNQLQL 535
Cdd:TIGR02168 620 yllggvlvVDDLDNALELAKKLRPGyrivTLDGDLVRPGGVITGGSAKTNSSILERRREIEE--------LEEKIEELEE 691
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 536 ELENLKQALGD---KLTSANQEIDRLQDLVRKSEQGLGSAEGLIASLQDSQERLQSELDLTKGRLKETKDALLNVEAELQ 612
Cdd:TIGR02168 692 KIAELEKALAElrkELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLE 771
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 613 QERHEHEQTLATMKEEEKlRVDRMAHDLeikwtENLRQECSKLRQELKLQHEEdkkcamSQLLQLKEREKTAARDSWQKK 692
Cdd:TIGR02168 772 EAEEELAEAEAEIEELEA-QIEQLKEEL-----KALREALDELRAELTLLNEE------AANLRERLESLERRIAATERR 839
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 693 VEDLLNQRHSLGEALHKSINNISLLKQNLElqlcqsqtslqqlqaQFTQERQRLTQELEELEEQHQQRHKSLKEAhvlaf 772
Cdd:TIGR02168 840 LEDLEEQIEELSEDIESLAAEIEELEELIE---------------ELESELEALLNERASLEEALALLRSELEEL----- 899
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 773 QTMEEEKEKEQRALETHLQqkhsaELQSLKDAHRESMEGFRVEMEQELQTLRFELEDEGKAMLAslrselnhqHATSIDL 852
Cdd:TIGR02168 900 SEELRELESKRSELRRELE-----ELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEA---------LENKIED 965
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1958759141 853 LRHSHHQELAAAKMELERSIDISRRQSKEhmcrISDLQDELRHREHHITDLDKEVQHLHESISTLTKE 920
Cdd:TIGR02168 966 DEEEARRRLKRLENKIKELGPVNLAAIEE----YEELKERYDFLTAQKEDLTEAKETLEEAIEEIDRE 1029
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
245-828 |
2.08e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 61.88 E-value: 2.08e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 245 KELIEEYEGKLSKAQLFYERELDNLKRSQLFTAESLQASRDKEADLRKEFQGQEAILRKTIGKLKTELQMVQDEASSLLD 324
Cdd:COG1196 216 RELKEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 325 KCQKLQMALATAENNVQVLQKQLDDAKEGEMALLSKHKEVESELAAARERLQEQASDLvrkashigmlqatqmtqevtiK 404
Cdd:COG1196 296 ELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEEL---------------------E 354
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 405 DLESEKSRAHERLCQLEKERAFLQSRTQSLDEEQKQQELEMEKKVNEVKRTQQEyyEMELKNLQTRLEGEVAQLNETHGK 484
Cdd:COG1196 355 EAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEA--EEALLERLERLEEELEELEEALAE 432
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 485 TLEELAwkhhmaieavhsnASRDKIKLQTELEEQHKKEKLSLEEDKNQLQLELENLKQALGDKLTSANQEIDRLQDLVRK 564
Cdd:COG1196 433 LEEEEE-------------EEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEA 499
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 565 SEQGLGSAEG-LIASLQDSQERLQSELDLTKGRLKETKDALLNVEAE-LQQERHEHEQTLATMKEEEK---------LRV 633
Cdd:COG1196 500 EADYEGFLEGvKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAaLQNIVVEDDEVAAAAIEYLKaakagratfLPL 579
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 634 DRMAHDLEIKWTENLRQECSKLRQELKLQHEEDKKCAMSQLLQLKEREKTAARDSWQKKVEDLLNQRHSL---GEALHKS 710
Cdd:COG1196 580 DKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVtleGEGGSAG 659
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 711 INNISLLKQNLELQLCQSQTSLQQLQAQFTQERQRLTQELEELEEQHQQRHKSLKEAHVLAFQTMEEEKEKEQRALETHL 790
Cdd:COG1196 660 GSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLE 739
|
570 580 590
....*....|....*....|....*....|....*...
gi 1958759141 791 QQKHSAELQSLKDAHRESMEGFRVEMEQELQTLRFELE 828
Cdd:COG1196 740 ELLEEEELLEEEALEELPEPPDLEELERELERLEREIE 777
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
105-704 |
2.46e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 61.49 E-value: 2.46e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 105 LDLKRKIQVLEASLedHVKMKQEALKEFEAYKRRVEDMQLcAEAQHVQRIVTMSREVEEIRKKFEErlrsfgqlqvqfen 184
Cdd:COG1196 216 RELKEELKELEAEL--LLLKLRELEAELEELEAELEELEA-ELEELEAELAELEAELEELRLELEE-------------- 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 185 dKQSALEELRTTHRLEVQELLRsqedhsasmnlgQEKAEELHRREVEALNNTLEELRLEKKELIEEYEGKlskaqlfyER 264
Cdd:COG1196 279 -LELELEEAQAEEYELLAELAR------------LEQDIARLEERRRELEERLEELEEELAELEEELEEL--------EE 337
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 265 ELDNLKRSQLFTAESLQASRDKEADLRKEFQGQEAilrktigklktELQMVQDEASSLLDKCQKLQMALATAENNVQVLQ 344
Cdd:COG1196 338 ELEELEEELEEAEEELEEAEAELAEAEEALLEAEA-----------ELAEAEEELEELAEELLEALRAAAELAAQLEELE 406
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 345 KQLDDAKEGEMALLSKHKEVESELAAARERLQEQASDLVRKASHIGMLQATQMTQEVTIKDLESEKSRAHERLCQLEKER 424
Cdd:COG1196 407 EAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEEL 486
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 425 AFLQSRTQSLDEEQKQQELEMEKKVNEVKRTQQEYYEMELKNLQ-----------TRLEGEVAQLNETHGKTLEELAWKH 493
Cdd:COG1196 487 AEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIgveaayeaaleAALAAALQNIVVEDDEVAAAAIEYL 566
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 494 HMAIEAVHSNASRDKIKLQTELEEQHKKEKLSLEEDKNQLQLELENLKQALGDKLTSANQEIDRLQDLVRKSEQGLGSAE 573
Cdd:COG1196 567 KAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRL 646
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 574 GLIASLQDSQERLQSELDLTKGRLKETKDALLNVEAELQQERHEHEQTLATMKEEEKLRVDRMAHDLEIKWTENLRQECS 653
Cdd:COG1196 647 REVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEAL 726
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....
gi 1958759141 654 KLRQELKLQHEEDKKCAMSQLLQ---LKEREKTAARDSWQKKVEDLLNQRHSLG 704
Cdd:COG1196 727 EEQLEAEREELLEELLEEEELLEeeaLEELPEPPDLEELERELERLEREIEALG 780
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
161-921 |
1.00e-06 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 53.14 E-value: 1.00e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 161 VEEIRKKFEERLRSFgQLQVQFENDKQSALEELRTTHRLEVQELLRSQEDHSASMNLGQEKAEELHRREVEALNNT---L 237
Cdd:TIGR02168 191 LEDILNELERQLKSL-ERQAEKAERYKELKAELRELELALLVLRLEELREELEELQEELKEAEEELEELTAELQELeekL 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 238 EELRLEKKELIEEYEgKLSKAQLFYERELDNLKRSQLFTAESLQASRDKeadlRKEFQGQEAILRKTIGKLKTELQMVQD 317
Cdd:TIGR02168 270 EELRLEVSELEEEIE-ELQKELYALANEISRLEQQKQILRERLANLERQ----LEELEAQLEELESKLDELAEELAELEE 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 318 EASSLLDKCQKLQMALATAENNVQVLQKQLDDAKEGEMALLSKHKEVESELAAARERLQEQASDLVRKASHIGMLQATQm 397
Cdd:TIGR02168 345 KLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEI- 423
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 398 tQEVTIKDLESEKSRAHERLCQLEKERAFLQSRtqsldEEQKQQELEMEKKVNEVKRTQQEYYEMELKNLQTRLEGEVAQ 477
Cdd:TIGR02168 424 -EELLKKLEEAELKELQAELEELEEELEELQEE-----LERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERL 497
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 478 LNETHGKTLEELAWKHHMAIEAVHSNASRDKIKLQTELEeqhkkekLSLE------------EDKNQLQLELENLKQALG 545
Cdd:TIGR02168 498 QENLEGFSEGVKALLKNQSGLSGILGVLSELISVDEGYE-------AAIEaalggrlqavvvENLNAAKKAIAFLKQNEL 570
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 546 DKLT------SANQEIDRLQDLVRKSEQG-LGSAEGLI--------------------ASLQDSQER------------L 586
Cdd:TIGR02168 571 GRVTflpldsIKGTEIQGNDREILKNIEGfLGVAKDLVkfdpklrkalsyllggvlvvDDLDNALELakklrpgyrivtL 650
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 587 QSELDLTKGRLKETKDALLNVEAELQQERHEHEQTLATMKEEEKLRVDRMAhDLEIKwTENLRQECSKLRQELkLQHEED 666
Cdd:TIGR02168 651 DGDLVRPGGVITGGSAKTNSSILERRREIEELEEKIEELEEKIAELEKALA-ELRKE-LEELEEELEQLRKEL-EELSRQ 727
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 667 KKCAMSQLLQLKEREKTAA--RDSWQKKVEDLLNQRHSLGEALHKSINNISLLKQNLELQlcqsqtslQQLQAQFTQERQ 744
Cdd:TIGR02168 728 ISALRKDLARLEAEVEQLEerIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEEL--------EAQIEQLKEELK 799
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 745 RLTQELEELEeqhqQRHKSLKEahvlAFQTMEEEKEKEQRalETHLQQKHSAELQSLKDAHRESMEGFRVEMEqELQTLR 824
Cdd:TIGR02168 800 ALREALDELR----AELTLLNE----EAANLRERLESLER--RIAATERRLEDLEEQIEELSEDIESLAAEIE-ELEELI 868
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 825 FELEDEGKAMLASLRSelnhqhatsidllrhshhqeLAAAKMELERSIDISRRQSKEHMCRISDLQDELRHREHHITDLD 904
Cdd:TIGR02168 869 EELESELEALLNERAS--------------------LEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLE 928
|
810
....*....|....*..
gi 1958759141 905 KEVQHLHESISTLTKEL 921
Cdd:TIGR02168 929 LRLEGLEVRIDNLQERL 945
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
156-478 |
2.91e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 51.61 E-value: 2.91e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 156 TMSREVEEIRKKFEERLRSFGQLQVqfENDKQSALEELRTTHR-LEVQELLRSQEDHSASMNLGQEKAEELHR------R 228
Cdd:TIGR02169 181 EVEENIERLDLIIDEKRQQLERLRR--EREKAERYQALLKEKReYEGYELLKEKEALERQKEAIERQLASLEEelekltE 258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 229 EVEALNNTLEELRLEKKELIEEYEGKLSKAQLFYERELDNLKRSQlftaESLQASRDKEADLRKEFQGQEAILRKTIGKL 308
Cdd:TIGR02169 259 EISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKEKIGELEAEI----ASLERSIAEKERELEDAEERLAKLEAEIDKL 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 309 KTELQmvqdeasslldkcqKLQMALATAENNVQVLQKQLDDAKEGEMALLSKHKEVESELAAARERLQEQASDLVRKASH 388
Cdd:TIGR02169 335 LAEIE--------------ELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKRE 400
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 389 IGMLQATQMTQEVTIKDLESEKSRAHERLCQLEKERAFLQSRTQSLDEEQKQQELEMEKKVNEVKRTQQEYYemELKNLQ 468
Cdd:TIGR02169 401 INELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELY--DLKEEY 478
|
330
....*....|
gi 1958759141 469 TRLEGEVAQL 478
Cdd:TIGR02169 479 DRVEKELSKL 488
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
91-451 |
3.89e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 51.22 E-value: 3.89e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 91 REKILLYKSRVTEELDLKRKIQVLEASLEDHVKMKQEALKEFEAYKRRVEDmqlcAEAQHVQ---RIVTMSREVEEIRKK 167
Cdd:TIGR02169 663 RGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSD----ASRKIGEiekEIEQLEQEEEKLKER 738
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 168 FEERLRSFGQLQVQFENDKQ---------SALEELRTTHRLEVQELLRSqEDHSASMNLGQE--KAEELHRREVEALNNT 236
Cdd:TIGR02169 739 LEELEEDLSSLEQEIENVKSelkeleariEELEEDLHKLEEALNDLEAR-LSHSRIPEIQAElsKLEEEVSRIEARLREI 817
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 237 leELRLEKKELIEEYEGKLSKAQLFYERELDNLKRSQLFTAESLQASRDKEADLRKEFQGQEAILRKTIGKLKTELQMVQ 316
Cdd:TIGR02169 818 --EQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELE 895
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 317 DEASSLLDKCQKLQMALATAENNVQVLQKQLDDAKEGEMALLSKHKEVESE---------LAAARERLQEQASDLvrkaS 387
Cdd:TIGR02169 896 AQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIpeeelsledVQAELQRVEEEIRAL----E 971
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1958759141 388 HIGMLqATQMTQEVTIKDLESEKSRAherlcQLEKERAFLQSRTQSLDEEQKQQELEMEKKVNE 451
Cdd:TIGR02169 972 PVNML-AIQEYEEVLKRLDELKEKRA-----KLEEERKAILERIEEYEKKKREVFMEAFEAINE 1029
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
162-833 |
6.66e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 50.52 E-value: 6.66e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 162 EEIRKKFEERlRSFGQLQVQFENDKQSALEELRTTHRLEvqELLRSQEDHSASMNLGQEKAEELH-RREVEALNNTLEEL 240
Cdd:PTZ00121 1094 EEAFGKAEEA-KKTETGKAEEARKAEEAKKKAEDARKAE--EARKAEDARKAEEARKAEDAKRVEiARKAEDARKAEEAR 1170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 241 RLEKKELIEEYEGKLSKAQLFYERELDNLKRSQlfTAESLQASRDKEADLRKEFQGQEAILRKTIGKLKTELQMVQDEAS 320
Cdd:PTZ00121 1171 KAEDAKKAEAARKAEEVRKAEELRKAEDARKAE--AARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEE 1248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 321 SLLDKCQKLQMALATAENNVQVLQKQLDDAKEGEmalLSKHKEVESELAAARERLQEQASDLVRKASHIGMLQATQMTQE 400
Cdd:PTZ00121 1249 RNNEEIRKFEEARMAHFARRQAAIKAEEARKADE---LKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAE 1325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 401 VTIKDLESEKSRAHERLCQLEKERAFLQSRTQSLDEEQKQQELEMEKKVNEVKRTQqeyyEMELKNLQTRLEGEVAQLNE 480
Cdd:PTZ00121 1326 EAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKAD----AAKKKAEEKKKADEAKKKAE 1401
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 481 THGKTLEELAWKhhmaiEAVHSNASRDKIKLQTELEEQHKKEKLSLEEDKNQLQLELENLKQAlgDKLTSANQEIDRLQD 560
Cdd:PTZ00121 1402 EDKKKADELKKA-----AAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKA--EEAKKKAEEAKKADE 1474
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 561 LVRKSEQGLGSAEgliasLQDSQERLQSELDLTKGRLKETKDALLNVEAELQQERHEHEQTLATMKEEEKLRVDRMAHDL 640
Cdd:PTZ00121 1475 AKKKAEEAKKADE-----AKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKAD 1549
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 641 EIKWTENLRQECSKLRQELKLQHEEDKKCAMSQLLQLKEREKTAARDSWQKKVEDLLNQRHSLGEALHKSINNISLLKQN 720
Cdd:PTZ00121 1550 ELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAE 1629
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 721 LELQLCQSQTSLQQLQAQFTQERQRLTQELEELEEQHQQRHKSLKEAHVLAFQTMEEEKEKEQRALETHLQQKHSAELQS 800
Cdd:PTZ00121 1630 EEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKK 1709
|
650 660 670
....*....|....*....|....*....|....*..
gi 1958759141 801 LKDAHRESMEGFRVEMEQEL----QTLRFELEDEGKA 833
Cdd:PTZ00121 1710 KEAEEKKKAEELKKAEEENKikaeEAKKEAEEDKKKA 1746
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
248-630 |
1.11e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 49.68 E-value: 1.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 248 IEEYEGKLSKAQLFYERELDNLKRSQLFTAESLQaSRDKeadLRKEFQGQEAILrktigKLKTELQMVqdEASSLLDKCQ 327
Cdd:TIGR02169 165 VAEFDRKKEKALEELEEVEENIERLDLIIDEKRQ-QLER---LRREREKAERYQ-----ALLKEKREY--EGYELLKEKE 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 328 KLQMALATAENNVQVLQKQLDDAKEGEMALLSKHKEVESELAAARERLQEQASD-LVRKASHIGMLQATQMTQEVTIKDL 406
Cdd:TIGR02169 234 ALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEeQLRVKEKIGELEAEIASLERSIAEK 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 407 ESEKSRAHERLCQLEKERAFLQSRTQSLDEEQKQQELEMEKKVNEVKRTQQEYYEmelknlqtrLEGEVAQLNETHGKTL 486
Cdd:TIGR02169 314 ERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELED---------LRAELEEVDKEFAETR 384
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 487 EELAwkhhmaieavhsnasrdkiKLQTELEEqhkkeklsleedknqlqlelenlkqaLGDKLTSANQEIDRLQDLVRKSE 566
Cdd:TIGR02169 385 DELK-------------------DYREKLEK--------------------------LKREINELKRELDRLQEELQRLS 419
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1958759141 567 QGLGSAEGLIASLQDSQERLQSELDLTKGRLKETKDALLNVEAELQQERHEHEQTLATMKEEEK 630
Cdd:TIGR02169 420 EELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEK 483
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
49-688 |
1.32e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 49.30 E-value: 1.32e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 49 KKIAQLTKVIYALNTKNDEHDSAIQALKDAHEEEIQQILAETREKILLYKSRV----TEELDLKRKIQVLEASLEDHVKM 124
Cdd:TIGR02169 244 RQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKEKIgeleAEIASLERSIAEKERELEDAEER 323
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 125 KQEALKEFEAYKRRVEDMQLCAEAQHVQRIVTMSR-------------EVEEIRKKFEERLRSFGQLQVQFENDKQSALE 191
Cdd:TIGR02169 324 LAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEyaelkeeledlraELEEVDKEFAETRDELKDYREKLEKLKREINE 403
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 192 ELRTTHRL--EVQELLRSQEDHSASMNLGQEKAEELH------RREVEALNNTLEELR----------LEKKELIEEYEG 253
Cdd:TIGR02169 404 LKRELDRLqeELQRLSEELADLNAAIAGIEAKINELEeekedkALEIKKQEWKLEQLAadlskyeqelYDLKEEYDRVEK 483
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 254 KLSKAQlfyeRELDNLKRSQLFTAESLQASRDKEADLRKEFQGQEAILRKtIGKLKTELQ--------------MVQDEA 319
Cdd:TIGR02169 484 ELSKLQ----RELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQ-LGSVGERYAtaievaagnrlnnvVVEDDA 558
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 320 SSL----LDKCQKLQMALATAENNVQVLQKQL------------------DDAKEGEMALLSKHKEVESELAAARE---- 373
Cdd:TIGR02169 559 VAKeaieLLKRRKAGRATFLPLNKMRDERRDLsilsedgvigfavdlvefDPKYEPAFKYVFGDTLVVEDIEAARRlmgk 638
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 374 -RLQEQASDLVRKASHIGMLQATQMTQEVTIKDLESEKSRAHERLCQLEKERAFLQSRTQSLDEE--QKQQELEMEKKVN 450
Cdd:TIGR02169 639 yRMVTLEGELFEKSGAMTGGSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRldELSQELSDASRKI 718
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 451 EVKRTQQEYYEMELKNLQTRLEGEVAQLNETHgktlEELAwkhhmaieavhsNASRDKIKLQTELEEqhkkeklsLEEDK 530
Cdd:TIGR02169 719 GEIEKEIEQLEQEEEKLKERLEELEEDLSSLE----QEIE------------NVKSELKELEARIEE--------LEEDL 774
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 531 NQLQLELENLKQALG--------DKLTSANQEIDRLQDLVRKSEQGLGSAEGLIASLQDSQERLQSELDLTKGRLKETKD 602
Cdd:TIGR02169 775 HKLEEALNDLEARLShsripeiqAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEK 854
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 603 ALLNVEA---ELQQERHEHEQTLATMKEE-EKLRVDRMAHDLEIKWTENLRQECSKLRQELKLQHEEDKKCAMSQLLQLK 678
Cdd:TIGR02169 855 EIENLNGkkeELEEELEELEAALRDLESRlGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELS 934
|
730
....*....|
gi 1958759141 679 EREKTAARDS 688
Cdd:TIGR02169 935 EIEDPKGEDE 944
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
68-659 |
1.84e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 48.98 E-value: 1.84e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 68 HDSAIQALKDAHEEEIQQILAETREKILLYKSRVTEEL----DLKRKIQvlEASLEDHVKMK-QEALKEFEAYKRRVEDM 142
Cdd:PTZ00121 1264 HFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKkkadEAKKKAE--EAKKADEAKKKaEEAKKKADAAKKKAEEA 1341
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 143 QLCAEAQhvqrivtmSREVEEIRKKFEERLRSFGQLQVQFENDKQSAlEELRTThrlevQELLRSQEDHSASMNLGQEKA 222
Cdd:PTZ00121 1342 KKAAEAA--------KAEAEAAADEAEAAEEKAEAAEKKKEEAKKKA-DAAKKK-----AEEKKKADEAKKKAEEDKKKA 1407
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 223 EELHRREVEALNNTLEELRLEKKELIEEYEGKLSKAqlfyeRELDNLKRSqlftAESLQASRDKEADLRKEFQGQEAILR 302
Cdd:PTZ00121 1408 DELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEA-----KKADEAKKK----AEEAKKAEEAKKKAEEAKKADEAKKK 1478
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 303 KTIGKLKTELQMVQDEASSLLDKCQKLQMALATAENnvqvlQKQLDDAKEGEMALLSKHKEVESELAAARErlqeqasdl 382
Cdd:PTZ00121 1479 AEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADE-----AKKAEEAKKADEAKKAEEAKKADEAKKAEE--------- 1544
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 383 VRKASHIGMLQATQMTQEVtiKDLESEKSRAHERLCQLEKERAFLQSRTQSLDEEQKQQELEMEKKVNEVKRTQQEYYEM 462
Cdd:PTZ00121 1545 KKKADELKKAEELKKAEEK--KKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKA 1622
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 463 ElknlQTRLEGEVAQLNETHGKTLEELAWKHHMAIEAVHSNASRDKIKLQTELEEQHKKEKLSLEEDKnqlqlelenlKQ 542
Cdd:PTZ00121 1623 E----ELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEED----------EK 1688
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 543 ALGDKLTSANQEIDRLQDLVRKSEQGLGSAEgliaSLQDSQERLQSELDLTKGRLKETKDallnvEAELQQERHEHEQTL 622
Cdd:PTZ00121 1689 KAAEALKKEAEEAKKAEELKKKEAEEKKKAE----ELKKAEEENKIKAEEAKKEAEEDKK-----KAEEAKKDEEEKKKI 1759
|
570 580 590
....*....|....*....|....*....|....*..
gi 1958759141 623 ATMKEEEKLRVDRMAHDLEIKWTENLRQECSKLRQEL 659
Cdd:PTZ00121 1760 AHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEV 1796
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
231-947 |
2.56e-05 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 48.58 E-value: 2.56e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 231 EALNNTLEELRLEKKELIEEY--EGKLSKAQLFYERELDNLKRSQLftaESLQASRDKEADLRK-EFQGQEAI---LRKT 304
Cdd:pfam15921 74 EHIERVLEEYSHQVKDLQRRLneSNELHEKQKFYLRQSVIDLQTKL---QEMQMERDAMADIRRrESQSQEDLrnqLQNT 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 305 IGKLKTELQMVQDEASSLLDKCQKLQMALATAENNVQVLQKQLDDAKEGEMALLSKHKEVESelaAARERLQEQASDLVR 384
Cdd:pfam15921 151 VHELEAAKCLKEDMLEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFEEASGKKIYEHDSMST---MHFRSLGSAISKILR 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 385 KA-SHIGMLQATQMTQEVTIKDLESEKSRAHERLCQLEKER------------AFLQSRTQSLDEEQKQQELEMEKkVNE 451
Cdd:pfam15921 228 ELdTEISYLKGRIFPVEDQLEALKSESQNKIELLLQQHQDRieqliseheveiTGLTEKASSARSQANSIQSQLEI-IQE 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 452 VKRTQQEYYEMELKNLQT---RLEGEVAQLNETHGKTLEELAWKHHMA-IEAVHSNASRDKI---------KLQTELEEQ 518
Cdd:pfam15921 307 QARNQNSMYMRQLSDLEStvsQLRSELREAKRMYEDKIEELEKQLVLAnSELTEARTERDQFsqesgnlddQLQKLLADL 386
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 519 HKKEK-LSLEEDKNQL--------QLELENLKQALGDKltsaNQEIDRLQDLVRK-SEQGLGSAEGLIASLQDSQERLQS 588
Cdd:pfam15921 387 HKREKeLSLEKEQNKRlwdrdtgnSITIDHLRRELDDR----NMEVQRLEALLKAmKSECQGQMERQMAAIQGKNESLEK 462
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 589 ELDLTkGRLKETKDALLNVEAELQQERHEHEQT-------LATMKEEEKLRVDRMAHDLEIKWTENLR-QECSKLRQELK 660
Cdd:pfam15921 463 VSSLT-AQLESTKEMLRKVVEELTAKKMTLESSertvsdlTASLQEKERAIEATNAEITKLRSRVDLKlQELQHLKNEGD 541
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 661 LQHEEDKKCamsQLLQLKEREKTAARDSWQKKVED---LLNQRHSLGEALHKSINNISLLKQNLELQLCQSQTSLQQLQA 737
Cdd:pfam15921 542 HLRNVQTEC---EALKLQMAEKDKVIEILRQQIENmtqLVGQHGRTAGAMQVEKAQLEKEINDRRLELQEFKILKDKKDA 618
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 738 QFTQERQRLTQELEELEEQHQQRHKSLKeahvlAFQTMEEEKEKEQRALETHlqqkhSAELQSLKDAHRESMEGFRVEME 817
Cdd:pfam15921 619 KIRELEARVSDLELEKVKLVNAGSERLR-----AVKDIKQERDQLLNEVKTS-----RNELNSLSEDYEVLKRNFRNKSE 688
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 818 qELQTLRFELedegKAMLASLRSELNHQHATSIDLLRHSHHQELAAakMELERSIDISRRQskehmcrISDLQDELRHRE 897
Cdd:pfam15921 689 -EMETTTNKL----KMQLKSAQSELEQTRNTLKSMEGSDGHAMKVA--MGMQKQITAKRGQ-------IDALQSKIQFLE 754
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....
gi 1958759141 898 HHITDLDKEVQHLHESISTLTKELELKGKEILRIRSE----SNQQMRLHEQDLN 947
Cdd:pfam15921 755 EAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAGElevlRSQERRLKEKVAN 808
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
359-585 |
3.02e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.45 E-value: 3.02e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 359 SKHKEVESELAAARERLQEQASDLVRKASHIGMLQATqmtqevtIKDLESEKSRAHERLCQLEKERAFLQSRTQSLDEEQ 438
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQ-------LAALERRIAALARRIRALEQELAALEAELAELEKEI 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 439 KQQELEMEKKVNEVKRTQQEYYEMELKN-LQTRLEGEVAQLNETHGKTLEELAWKHHMAIEAVhsNASRDKIKLQTELEE 517
Cdd:COG4942 93 AELRAELEAQKEELAELLRALYRLGRQPpLALLLSPEDFLDAVRRLQYLKYLAPARREQAEEL--RADLAELAALRAELE 170
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1958759141 518 QHKKEKLSLEEDKNQLQLELENLKQALGDKLTSANQEIDRLQDLVRKSEQGLGSAEGLIASLQDSQER 585
Cdd:COG4942 171 AERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAA 238
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
52-446 |
3.35e-05 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 48.19 E-value: 3.35e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 52 AQLTKVIYALNTKND--EHDSAIQALKDAHEEEIQQILAETREKILLYKSRvteeldlKRKIQVLEASLEDHVKMKQEAL 129
Cdd:pfam15921 444 GQMERQMAAIQGKNEslEKVSSLTAQLESTKEMLRKVVEELTAKKMTLESS-------ERTVSDLTASLQEKERAIEATN 516
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 130 KEFEAYKRRV-----EDMQLCAEAQHVQRIVTmsrEVEEIRKKFEERLRSFGQLQVQFENDKQSALEELRTTHRLEVQEL 204
Cdd:pfam15921 517 AEITKLRSRVdlklqELQHLKNEGDHLRNVQT---ECEALKLQMAEKDKVIEILRQQIENMTQLVGQHGRTAGAMQVEKA 593
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 205 LRSQEDHSASMNLGQEKA-EELHRREVEALNNTLEELRLEKKELIEEYEGKLsKAQLFYERELDNLKRSQLFTAESLQAS 283
Cdd:pfam15921 594 QLEKEINDRRLELQEFKIlKDKKDAKIRELEARVSDLELEKVKLVNAGSERL-RAVKDIKQERDQLLNEVKTSRNELNSL 672
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 284 RDKEADLRKEFQGQEAILRKTIGKLKTELQMVQDEASSLLDKCQKLQMALATAENNVQVLQKQLdDAKEGEM-ALLSKHK 362
Cdd:pfam15921 673 SEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELEQTRNTLKSMEGSDGHAMKVAMGMQKQI-TAKRGQIdALQSKIQ 751
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 363 EVESELAAARER---LQEQASDLVRKASHIGMlQATQMTQEVTIkdLESEKSRAHERLCQLEK--ERAFLQ-SRTQSLDE 436
Cdd:pfam15921 752 FLEEAMTNANKEkhfLKEEKNKLSQELSTVAT-EKNKMAGELEV--LRSQERRLKEKVANMEValDKASLQfAECQDIIQ 828
|
410
....*....|
gi 1958759141 437 EQKQQELEME 446
Cdd:pfam15921 829 RQEQESVRLK 838
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
238-944 |
4.61e-05 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 47.66 E-value: 4.61e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 238 EELRLEKKELIEEYEGKLSKAQLFYERELDNLKRSQLFTAESLQASRDKEADLRKEFQGQEAILRKTIGKLKT--ELQMV 315
Cdd:TIGR00618 179 TQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYLTQKREAqeEQLKK 258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 316 QDEASSLLDKCQKLQMALATAENNVQVLQKQLDDAKegeMALLSKH-KEVESELAAARERLQEQASDLVRKASHIGMLQA 394
Cdd:TIGR00618 259 QQLLKQLRARIEELRAQEAVLEETQERINRARKAAP---LAAHIKAvTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVK 335
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 395 TQMTQEVTIKDLESEKSRAHERLCQLEKERAFLQSRTQSLDEEQKQQELEMEKKVNEVKRTQQEYYEMELKNLQTRLEGE 474
Cdd:TIGR00618 336 QQSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKELDILQREQATIDTR 415
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 475 VAQLNETHGKTL----EELAWKHHMAIEAVHSNASRDKIKLQTELEE---QHKKEKLSLEEDKNQLQLELENLKQALGDK 547
Cdd:TIGR00618 416 TSAFRDLQGQLAhakkQQELQQRYAELCAAAITCTAQCEKLEKIHLQesaQSLKEREQQLQTKEQIHLQETRKKAVVLAR 495
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 548 LtsanQEIDRLQDLVRKSEQGLGSAEGLIASLQDSQERLQSELDLTKGRLKETKDALLNVEAELQQERHEHEQTLATMKE 627
Cdd:TIGR00618 496 L----LELQEEPCPLCGSCIHPNPARQDIDNPGPLTRRMQRGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQS 571
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 628 EEKLRVDRMAHDLEIkwtENLRQECSKLRQELKLQHEEDKKCAMsqLLQLKEREKTAARDSWQKKVEDLLNQRHSLGEAL 707
Cdd:TIGR00618 572 FSILTQCDNRSKEDI---PNLQNITVRLQDLTEKLSEAEDMLAC--EQHALLRKLQPEQDLQDVRLHLQQCSQELALKLT 646
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 708 HKSINNISLLKQNLELQLCQSQTSLQQLQAQFTQERQRLTQELEELEEQHQQRHKSLKEAHVLAFQTMEEEKEKEQRALE 787
Cdd:TIGR00618 647 ALHALQLTLTQERVREHALSIRVLPKELLASRQLALQKMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREFNEIENA 726
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 788 THLQQkhsAELQSLKDAHRESMEGFRVEMEQELQTLRFELEDEGKAMLASLRSELNHQHATSIDLLRHSHHQELAAAKME 867
Cdd:TIGR00618 727 SSSLG---SDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNEEVTAALQTGAELSHLAAEIQFFNRLREEDTHLLKT 803
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1958759141 868 LERSIdisrRQSKEHMCRISDLQDELRHREHHitDLDKEVQHLHESISTLTKELELKGKEILRIRSESNQQMRLHEQ 944
Cdd:TIGR00618 804 LEAEI----GQEIPSDEDILNLQCETLVQEEE--QFLSRLEEKSATLGEITHQLLKYEECSKQLAQLTQEQAKIIQL 874
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
468-630 |
6.20e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 47.22 E-value: 6.20e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 468 QTRLEGEVAQLNETHGKTLEELAwKHHMAIEAVHSNASRDKIKLQTELEEQHKKEKLSLEEDKNQLQLELENLKQAL--- 544
Cdd:COG4913 250 QIELLEPIRELAERYAAARERLA-ELEYLRAALRLWFAQRRLELLEAELEELRAELARLEAELERLEARLDALREELdel 328
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 545 --------GDKLTSANQEIDRLQDLVRKSEQGLGSAEGLIASLQDSQERLQSELDLTKGRLKETKDALLNVEAELQQERH 616
Cdd:COG4913 329 eaqirgngGDRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEALEEELEALEEALA 408
|
170
....*....|....
gi 1958759141 617 EHEQTLATMKEEEK 630
Cdd:COG4913 409 EAEAALRDLRRELR 422
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
135-469 |
2.00e-04 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 45.45 E-value: 2.00e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 135 YKRRVEDMQLCAEAQHVQRIVTMSREVEEIR--KKFEERLRSFGQLQVQFenDKQSALEELRTThrlEVQELLRSQEDHS 212
Cdd:COG5022 764 YLQALKRIKKIQVIQHGFRLRRLVDYELKWRlfIKLQPLLSLLGSRKEYR--SYLACIIKLQKT---IKREKKLRETEEV 838
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 213 ASMnlgqEKAEELHRREVEALNNTLEELRLEKKELIEEYEGKLSKAQLFY-ERELDNLKRSQLFT------AESLQASRD 285
Cdd:COG5022 839 EFS----LKAEVLIQKFGRSLKAKKRFSLLKKETIYLQSAQRVELAERQLqELKIDVKSISSLKLvnleleSEIIELKKS 914
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 286 KEADLRKEFQgqeaILRKTIGKLKTELQMVQDEASSLLDKCQKLQmalataENNVQVLQKQLDDAKEGEMALLSKHKEVE 365
Cdd:COG5022 915 LSSDLIENLE----FKTELIARLKKLLNNIDLEEGPSIEYVKLPE------LNKLHEVESKLKETSEEYEDLLKKSTILV 984
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 366 SELAAARERLQEQASDLVRKASHIGMLQAtqmtQEVTIKDLESEKSRAHERLCQLEKERAFLQSRTQSLD----EEQKQQ 441
Cdd:COG5022 985 REGNKANSELKNFKKELAELSKQYGALQE----STKQLKELPVEVAELQSASKIISSESTELSILKPLQKlkglLLLENN 1060
|
330 340
....*....|....*....|....*...
gi 1958759141 442 ELEMEKKVNEVKRTQQEYYEMELKNLQT 469
Cdd:COG5022 1061 QLQARYKALKLRRENSLLDDKQLYQLES 1088
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
512-715 |
2.61e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 44.37 E-value: 2.61e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 512 QTELEEQHKKEKLSLEEDKNQLQLELENLKQ---ALGDKLTSANQEIDRLQDLVRKSEQGLGSAEGLIASLQDSQERLQS 588
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKeekALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 589 ELDLTKGRLKETKDA------------LLNVEAELQQERheHEQTLATMKEEEKLRVDRMAHDLEIkwTENLRQECSKLR 656
Cdd:COG4942 98 ELEAQKEELAELLRAlyrlgrqpplalLLSPEDFLDAVR--RLQYLKYLAPARREQAEELRADLAE--LAALRAELEAER 173
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1958759141 657 QELKLQHEEDKKCAMSQLLQLKEREKTAAR-----DSWQKKVEDLLNQRHSLGEALHKSINNIS 715
Cdd:COG4942 174 AELEALLAELEEERAALEALKAERQKLLARlekelAELAAELAELQQEAEELEALIARLEAEAA 237
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
305-463 |
2.67e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 44.44 E-value: 2.67e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 305 IGKLKTELQMVQDEASSLLDKCQKLQMALATAENNVQVLQKQLDDAKEGEMALLSKHKEVESELAAARERLQEQA----- 379
Cdd:COG3883 18 IQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERAralyr 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 380 -----------------SDLVRKASHIGMLQATQM----TQEVTIKDLESEKSRAHERLCQLEKERAFLQSRTQSLDEEQ 438
Cdd:COG3883 98 sggsvsyldvllgsesfSDFLDRLSALSKIADADAdlleELKADKAELEAKKAELEAKLAELEALKAELEAAKAELEAQQ 177
|
170 180
....*....|....*....|....*
gi 1958759141 439 KQQELEMEKKVNEVKRTQQEYYEME 463
Cdd:COG3883 178 AEQEALLAQLSAEEAAAEAQLAELE 202
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
96-322 |
2.67e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 45.29 E-value: 2.67e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 96 LYKSRVTEELDLKRKIQVLEASLEDHVKMKQEALKEfeayKRRVEdmQLCAEAQHVQRIVTMSREVEEIrkkfeERLRSf 175
Cdd:COG4913 212 FVREYMLEEPDTFEAADALVEHFDDLERAHEALEDA----REQIE--LLEPIRELAERYAAARERLAEL-----EYLRA- 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 176 gQLQVQFENDKQSALEELRTTHRLEVQELLRSQEDHSASMNLGQEKAEELHRREVEALNNTLEELRLEKKELIEEYEGKL 255
Cdd:COG4913 280 -ALRLWFAQRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIRGNGGDRLEQLEREIERLERELEERE 358
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1958759141 256 SKAQLfYERELDNLKRSQLFTAESLQASRDKEADLRKEFQGQEAILRKTIGKLKTELQMVQDEASSL 322
Cdd:COG4913 359 RRRAR-LEALLAALGLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELREL 424
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
72-608 |
3.48e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 44.67 E-value: 3.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 72 IQALKDAHEEEIQQIlAETREKILLYKSRVTEELDLKRKIQVLEASLEDHVKMKQEALKEFEAYKRRVEDM--QLCAEAQ 149
Cdd:PRK03918 174 IKRRIERLEKFIKRT-ENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELekELESLEG 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 150 HVQRIVTMSREVEEIRKKFEERLRSFGQL-----QVQFENDKQSALEELRTTHRLEVQELLRSQEDHSASMNLGQEKAEE 224
Cdd:PRK03918 253 SKRKLEEKIRELEERIEELKKEIEELEEKvkelkELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKE 332
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 225 LhrrevEALNNTLEELRLEKKELIEEYEgKLSKAQLFYERELDNLKRSQLFTAESLQASRDKEADLRKEFQGQEAILRKT 304
Cdd:PRK03918 333 L-----EEKEERLEELKKKLKELEKRLE-ELEERHELYEEAKAKKEELERLKKRLTGLTPEKLEKELEELEKAKEEIEEE 406
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 305 IGKLKTELQMVQDEASSLldkcQKLQMALATAENNVQVLQKQLDDAKEGEM---------ALLSKHKEVESELAAARERL 375
Cdd:PRK03918 407 ISKITARIGELKKEIKEL----KKAIEELKKAKGKCPVCGRELTEEHRKELleeytaelkRIEKELKEIEEKERKLRKEL 482
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 376 QEQASDLVRKASHIGMLQATQMTQEVTIK----DLEsEKSRAHERLCQLEKERAFLQSRTQSLDEEQKQQElEMEKKVNE 451
Cdd:PRK03918 483 RELEKVLKKESELIKLKELAEQLKELEEKlkkyNLE-ELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLE-ELKKKLAE 560
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 452 VKRTQQEyYEMELKNLQTRLEGEVAQLNETHGKTLEELAWKHHMAIEAVHSnasrdKIKLQTELEEQhKKEKLSLEEDKN 531
Cdd:PRK03918 561 LEKKLDE-LEEELAELLKELEELGFESVEELEERLKELEPFYNEYLELKDA-----EKELEREEKEL-KKLEEELDKAFE 633
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 532 QLQL---ELENLKQALGDKLTSANQE-IDRLQDLVRKSEQGLGSAEGLIASLQDSQERLQSELDLTKGRLKETKDALLNV 607
Cdd:PRK03918 634 ELAEtekRLEELRKELEELEKKYSEEeYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREKAKKEL 713
|
.
gi 1958759141 608 E 608
Cdd:PRK03918 714 E 714
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
220-660 |
6.64e-04 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 43.88 E-value: 6.64e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 220 EKAEELHRREVEALNNTLEELRlEKKELIEEYEGKLSKAQLFY---ERELDNLKRSQLFTAESLQASRDKEADLRKEfQG 296
Cdd:PRK02224 226 EEQREQARETRDEADEVLEEHE-ERREELETLEAEIEDLRETIaetEREREELAEEVRDLRERLEELEEERDDLLAE-AG 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 297 QEAILRKTIGKLKTELQMVQDEASSLLDKCQklqMALATAENNVQVLQKQLDDAKEGEMALLSKHKEVESELAAARERLQ 376
Cdd:PRK02224 304 LDDADAEAVEARREELEDRDEELRDRLEECR---VAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVE 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 377 EQASDLVRKASHIGMLQATQMTQEVTIKDLE-------SEKSRAHERLCQLEKERAFLQSR---TQSLDEEQK----QQE 442
Cdd:PRK02224 381 DRREEIEELEEEIEELRERFGDAPVDLGNAEdfleelrEERDELREREAELEATLRTARERveeAEALLEAGKcpecGQP 460
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 443 LEMEKKVNEV--KRTQQEYYEMELKNLQTRLEGEVAQLN---------------ETHGKTLEELAWKHHMAIEavhsnAS 505
Cdd:PRK02224 461 VEGSPHVETIeeDRERVEELEAELEDLEEEVEEVEERLEraedlveaedrierlEERREDLEELIAERRETIE-----EK 535
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 506 RDKIKLQTELEEQHKKEKLSLEEDKNQLQLELENLKQALGD---KLTSANQEIDRLQDlVRKSEQGLGSAEGLIASLQDS 582
Cdd:PRK02224 536 RERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAElnsKLAELKERIESLER-IRTLLAAIADAEDEIERLREK 614
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 583 QERLQSELDLTKGRLKETKDALLNVEAEL--------QQERHEHEQTLATMKEE-EKLRVDRMAHDLEIKWTENLRQECS 653
Cdd:PRK02224 615 REALAELNDERRERLAEKRERKRELEAEFdearieeaREDKERAEEYLEQVEEKlDELREERDDLQAEIGAVENELEELE 694
|
....*..
gi 1958759141 654 KLRQELK 660
Cdd:PRK02224 695 ELRERRE 701
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
231-556 |
1.06e-03 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 42.98 E-value: 1.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 231 EALNNTLEELrleKKELIEEYEGKLSKAQLfyERELDNLkrsqlftaESLQASRDKEADLRKEFQGQEAILRKT---IGK 307
Cdd:PRK11281 39 ADVQAQLDAL---NKQKLLEAEDKLVQQDL--EQTLALL--------DKIDRQKEETEQLKQQLAQAPAKLRQAqaeLEA 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 308 LKTELQMVQDEASSLLDKCQkLQMALATAENNVQVLQKQLDDAKEGEMALLSKHKEVESELAAARERLQE--------QA 379
Cdd:PRK11281 106 LKDDNDEETRETLSTLSLRQ-LESRLAQTLDQLQNAQNDLAEYNSQLVSLQTQPERAQAALYANSQRLQQirnllkggKV 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 380 SDLVRKASHIGMLQATQMTQEVtikdleseksraherlcQLEKERAFLQSRTQSLDEEQKQQELEMEKkvneVKRTQQey 459
Cdd:PRK11281 185 GGKALRPSQRVLLQAEQALLNA-----------------QNDLQRKSLEGNTQLQDLLQKQRDYLTAR----IQRLEH-- 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 460 yemELKNLQTRLEGEVAQLNEthgKTLEElawkhhmAIEAVHSNASRDKIKLQTELEEQHKKEKLSLEEDKNQLQLELEN 539
Cdd:PRK11281 242 ---QLQLLQEAINSKRLTLSE---KTVQE-------AQSQDEAARIQANPLVAQELEINLQLSQRLLKATEKLNTLTQQN 308
|
330
....*....|....*....
gi 1958759141 540 L--KQALgDKLTSANQEID 556
Cdd:PRK11281 309 LrvKNWL-DRLTQSERNIK 326
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
48-793 |
1.47e-03 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 42.65 E-value: 1.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 48 SKKIAQLTKVIYALNTKNDEHDSAIQALKDAHEEEIQQILAETREKILLYKSRVTEELDLKRKIQVLEASLEDHVKMKQE 127
Cdd:pfam02463 263 EEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKEKEEIEELEK 342
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 128 ALKEFEAYKRRVEDmqlcAEAQHVQRIVTMSREVEEIRKKFEERLRSFGQLQVQFENDKQSALEELRTthRLEVQELLRS 207
Cdd:pfam02463 343 ELKELEIKREAEEE----EEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKE--AQLLLELARQ 416
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 208 QEDhsasMNLGQEKAEELHRREVEALNNTLEELRLEKKELIEEYEGKLSKAQLFYERELDNLKRSQLFTAESLQASRDKE 287
Cdd:pfam02463 417 LED----LLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELLLSR 492
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 288 ADLRKEFQGQEAILRKTIGKLKTELQMVQDEASSLLDKCQKLQMALATAENNVQVLQKQLDDAKEGEMALLSKHKEVESE 367
Cdd:pfam02463 493 QKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIVEVSATADEVEERQKLVRALTE 572
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 368 LAAARERLQEQASDLVRKASHIGMLQATQMTQEVTIKDLESEKSRAHERLCQLEKERAfLQSRTQSLDEEQKQQELEMEK 447
Cdd:pfam02463 573 LPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILK-DTELTKLKESAKAKESGLRKG 651
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 448 KVNEVKRTQQEYYEMELKNLQTRLEGEVAQLNETHGKTLEELAWKHHMAIEAVHSNASRDKIKLQTELEE-QHKKEKLSL 526
Cdd:pfam02463 652 VSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEElLADRVQEAQ 731
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 527 EEDKNQLQLELENLKQALGDKLTSANQEIDRLQDLVRKSEQGLGSAEGLIASLQDSQERLQSELDLTKGRLKETKDALLN 606
Cdd:pfam02463 732 DKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQEEELRALEEELK 811
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 607 VEAELQQERHEHEQTLATMKEEEKLRVDRMAHDLEIKWTENLRQECSKLRQELKLQHEEDKKCAMSQLLQLKEREKTAAR 686
Cdd:pfam02463 812 EEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLLKEEELEEQKLKDELESK 891
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 687 DSWQKKVEDLLNQRHSLGEALHKSINNISLLKQNLELQLCQSQTSLQQLQAQFTQERQRLTQELEELEEQHQQRHKSLKE 766
Cdd:pfam02463 892 EEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKEKEENNKEEEEERNKRLLLAKEE 971
|
730 740
....*....|....*....|....*..
gi 1958759141 767 AHVLAFQTMEEEKEKEQRALETHLQQK 793
Cdd:pfam02463 972 LGKVNLMAIEEFEEKEERYNKDELEKE 998
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
332-650 |
1.51e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 42.20 E-value: 1.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 332 ALATAENNVQVLQKQLDDAKEGEMALLSKHKEVESELAAARERLQEQASDLVRKASHIGMLQATQMTQEVTIKDLESEKS 411
Cdd:COG4372 32 QLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQEEAE 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 412 RAHERLCQLEKERAFLQSRTQSLDEEQKQQELEMEKKVNEVKRTQQEyyemelknlQTRLEGEVAQLNETHGKTLEELAW 491
Cdd:COG4372 112 ELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQ---------LESLQEELAALEQELQALSEAEAE 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 492 KHHMAIEAVHSNASRDKIKLQTELEEQHKKEKLSLEEDKNQLQLELENLKQALGDKLTSANQEIDRLQDLVRKSEQGLGS 571
Cdd:COG4372 183 QALDELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEE 262
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1958759141 572 AEGLIASLQDSQERLQSELDLTKGRLKETKDALLNVEAELQQERHEHEQTLATMKEEEKLRVDRMAHDLEIKWTENLRQ 650
Cdd:COG4372 263 LELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLELALAILLAELAD 341
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
78-701 |
1.91e-03 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 42.52 E-value: 1.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 78 AHEEEIQQILAETREKILLYKSRVTEELDLKRKIQVLEASLEDHVKMKQEALKEFEAYKRRVEDMQLCAEAQHVQRIVTm 157
Cdd:pfam12128 344 ADQEQLPSWQSELENLEERLKALTGKHQDVTAKYNRRRSKIKEQNNRDIAGIKDKLAKIREARDRQLAVAEDDLQALES- 422
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 158 sreveEIRKKFEERLRSFGQLQVQFEndkqSALEEL--RTTHRLEVQELLRSQEDHSASMNLGQEKAEElHRREVEALNN 235
Cdd:pfam12128 423 -----ELREQLEAGKLEFNEEEYRLK----SRLGELklRLNQATATPELLLQLENFDERIERAREEQEA-ANAEVERLQS 492
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 236 TLEELRlEKKELIEEYEGKLSKAQLFYERELDNLKRSQLFTAESLQASRDKEADLRKEFQGQeaiLRKTIGKLKTELQMV 315
Cdd:pfam12128 493 ELRQAR-KRRDQASEALRQASRRLEERQSALDELELQLFPQAGTLLHFLRKEAPDWEQSIGK---VISPELLHRTDLDPE 568
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 316 QDEAS--------SLLDKCQKLQMALATAENnvQVLQKQLDDAKEGEMALLSKHKEVESELAAARERLQEQASDLVRKAS 387
Cdd:pfam12128 569 VWDGSvggelnlyGVKLDLKRIDVPEWAASE--EELRERLDKAEEALQSAREKQAAAEEQLVQANGELEKASREETFART 646
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 388 -------HIGMLQATQMTQEVTI-KDLESEKSRAHERLCQLEKERAFLQSRTQSLDEEQKQQELEMEKKVNEVKRTqqey 459
Cdd:pfam12128 647 alknarlDLRRLFDEKQSEKDKKnKALAERKDSANERLNSLEAQLKQLDKKHQAWLEEQKEQKREARTEKQAYWQV---- 722
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 460 YEMELKNLQTRLEGEVAQLNETHGKTLEELAWKHHMAIEA------VHSNASRDKIKLQTELEEQHKKEKLSLE-EDKNQ 532
Cdd:pfam12128 723 VEGALDAQLALLKAAIAARRSGAKAELKALETWYKRDLASlgvdpdVIAKLKREIRTLERKIERIAVRRQEVLRyFDWYQ 802
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 533 LQLELEnlKQALGDKLTSANQEIDRLQDLVRKSEQGLGSAEGLIASLQDSQERLQSELD--LTKGRLKETKDALLNVEAE 610
Cdd:pfam12128 803 ETWLQR--RPRLATQLSNIERAISELQQQLARLIADTKLRRAKLEMERKASEKQQVRLSenLRGLRCEMSKLATLKEDAN 880
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 611 LQQERHEHEQTLATMkEEEKLRVDRMAHDLEiKWTENLRQECSKLRQELKLQH-----EEDKKCAMSQLLQLKEREktaa 685
Cdd:pfam12128 881 SEQAQGSIGERLAQL-EDLKLKRDYLSESVK-KYVEHFKNVIADHSGSGLAETweslrEEDHYQNDKGIRLLDYRK---- 954
|
650
....*....|....*.
gi 1958759141 686 rdsWQKKVEDLLNQRH 701
Cdd:pfam12128 955 ---LVPYLEQWFDVRV 967
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
354-566 |
3.20e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 41.65 E-value: 3.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 354 EMALLSKHKEVESELAAARE-RLQEQASDLVRKASHIGMLQA---TQMTQEVTIKDLESEKSRAHERLCQLEKERAFLQS 429
Cdd:pfam17380 384 QMERQQKNERVRQELEAARKvKILEEERQRKIQQQKVEMEQIraeQEEARQREVRRLEEERAREMERVRLEEQERQQQVE 463
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 430 RTQSLDEEQKQQELEMEKKvnevKRTQQEYYEMELKNLQTRLEgevaqlnETHGKTLEElawkhhmaieavhsnaSRDKI 509
Cdd:pfam17380 464 RLRQQEEERKRKKLELEKE----KRDRKRAEEQRRKILEKELE-------ERKQAMIEE----------------ERKRK 516
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1958759141 510 KLQTELEEQHK----KEKLSLEEDKNQLQLELENLKQaLGDKLTSANQEIDRLQDLVRKSE 566
Cdd:pfam17380 517 LLEKEMEERQKaiyeEERRREAEEERRKQQEMEERRR-IQEQMRKATEERSRLEAMERERE 576
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
496-659 |
3.39e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.44 E-value: 3.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 496 AIEAVHSNASRDKIKLQTELEEQHKK--------EKLSLEEDKNQLQLELENLKQALgDKLTSANQEIDRLQDLVRKSEQ 567
Cdd:COG4913 621 ELEEELAEAEERLEALEAELDALQERrealqrlaEYSWDEIDVASAEREIAELEAEL-ERLDASSDDLAALEEQLEELEA 699
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 568 GLGSAEGLIASLQDSQERLQSELDLTKGRLKETKDALLNVEAELQQERHEHeqtLATMKEEEKL--RVDRMAHDLEIKwT 645
Cdd:COG4913 700 ELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRAL---LEERFAAALGdaVERELRENLEER-I 775
|
170
....*....|....
gi 1958759141 646 ENLRQECSKLRQEL 659
Cdd:COG4913 776 DALRARLNRAEEEL 789
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
770-1027 |
3.45e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 41.46 E-value: 3.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 770 LAFQTMEEEKEKEQRALETHLQQKHSAELQSLKDAHRESMEGFRVE---MEQELQTLRFELEDEGKAMLASLRSElnhqh 846
Cdd:COG1196 216 RELKEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAElaeLEAELEELRLELEELELELEEAQAEE----- 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 847 atsidllrhshhQELAAAKMELERSIDISRRQSKEHMCRISDLQDELRHREHHITDLDKEVQHLHESISTLTKELELKGK 926
Cdd:COG1196 291 ------------YELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEA 358
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 927 EI---LRIRSESNQQMRLHEQDLNKRLEKELDVMTA---DHLREKNIMRADFNKTNELLKEINAALQVSLEDMEEKYLMR 1000
Cdd:COG1196 359 ELaeaEEALLEAEAELAEAEEELEELAEELLEALRAaaeLAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEE 438
|
250 260
....*....|....*....|....*..
gi 1958759141 1001 ESRPEDLQMIAELKSLLTERDQVIKKL 1027
Cdd:COG1196 439 EEEEALEEAAEEEAELEEEEEALLELL 465
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
87-446 |
4.12e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 41.48 E-value: 4.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 87 LAETREKILLYKSRVTEELDLKRKIQVLEASLE-------DHVKMKQEALKEFEAYKRRVEDMQLCAEAQHVQRIVTmsR 159
Cdd:COG3096 294 LFGARRQLAEEQYRLVEMARELEELSARESDLEqdyqaasDHLNLVQTALRQQEKIERYQEDLEELTERLEEQEEVV--E 371
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 160 EVEEIRKKFEERLR----SFGQLQVQFEnDKQSALEELRT---THRLEVQELLRSQEDHSASmNLGQEKAEELHRREVEA 232
Cdd:COG3096 372 EAAEQLAEAEARLEaaeeEVDSLKSQLA-DYQQALDVQQTraiQYQQAVQALEKARALCGLP-DLTPENAEDYLAAFRAK 449
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 233 LNNTLEELR-LEKK---------------ELIEEYEGKLSKAQLFYE-RELDNLKRSQLFTAESLQASRDKEADLRKEFQ 295
Cdd:COG3096 450 EQQATEEVLeLEQKlsvadaarrqfekayELVCKIAGEVERSQAWQTaRELLRRYRSQQALAQRLQQLRAQLAELEQRLR 529
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 296 GQEailrktigklktelqmvqdEASSLLDKCQKLQMALATAENNVQVLQKQLDDAKEGEMALLSKHKEVESELAAARERL 375
Cdd:COG3096 530 QQQ-------------------NAERLLEEFCQRIGQQLDAAEELEELLAELEAQLEELEEQAAEAVEQRSELRQQLEQL 590
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1958759141 376 QEQASDLVRKASH-IGMLQATQMTQEVTIKDLESEKSRAHERLCQLEKERAFLQSRTQSldeEQKQQELEME 446
Cdd:COG3096 591 RARIKELAARAPAwLAAQDALERLREQSGEALADSQEVTAAMQQLLEREREATVERDEL---AARKQALESQ 659
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
146-558 |
7.50e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 40.32 E-value: 7.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 146 AEAQHvqRIVTMSREVEEIrkkfeerlrsfGQLQVQFENDKQSALEELRTthrleVQELLRSQED---HSASMNLGQEKA 222
Cdd:COG3096 302 AEEQY--RLVEMARELEEL-----------SARESDLEQDYQAASDHLNL-----VQTALRQQEKierYQEDLEELTERL 363
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 223 EELHRrEVEALNNTLEELRlEKKELIEEyEGKLSKAQLF-YERELDNLKRSQLFTAESLQASRDKEADLrkefqGQEAIL 301
Cdd:COG3096 364 EEQEE-VVEEAAEQLAEAE-ARLEAAEE-EVDSLKSQLAdYQQALDVQQTRAIQYQQAVQALEKARALC-----GLPDLT 435
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 302 RKTIGKLKTELQMVQDEA-SSLLDKCQKLQMALATAENNVQVLQ--KQLDDAKEGEMA------LLSKHKE--------- 363
Cdd:COG3096 436 PENAEDYLAAFRAKEQQAtEEVLELEQKLSVADAARRQFEKAYElvCKIAGEVERSQAwqtareLLRRYRSqqalaqrlq 515
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 364 -VESELAAARERLQEQAsDLVRKASHIGMLQATQMTQEvtiKDLESEKSRAHERLCQLEKERAflqsrtqsldeEQKQQE 442
Cdd:COG3096 516 qLRAQLAELEQRLRQQQ-NAERLLEEFCQRIGQQLDAA---EELEELLAELEAQLEELEEQAA-----------EAVEQR 580
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 443 LEMEKKVNEVKRTQQEYYEMELK--NLQTRLEgevaQLNETHGKTLEelawkhhmaieavHSNASRDKIKLQTELEEQHK 520
Cdd:COG3096 581 SELRQQLEQLRARIKELAARAPAwlAAQDALE----RLREQSGEALA-------------DSQEVTAAMQQLLEREREAT 643
|
410 420 430
....*....|....*....|....*....|....*...
gi 1958759141 521 KEKLSLEEDKNQLQLELENLKQALGDKLTSANQEIDRL 558
Cdd:COG3096 644 VERDELAARKQALESQIERLSQPGGAEDPRLLALAERL 681
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
324-567 |
8.10e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 39.75 E-value: 8.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 324 DKCQKLQMALATAENNVQVLQKQLDDAKEGEMALLSKHKEVESELAAARERLQEqasdlvrkashigmLQATQMTQEVTI 403
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRA--------------LEQELAALEAEL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 404 KDLESEKSRAHERLCQLEKERAFLQSRTQSLDEEQKQQELEMEKKVNEVKRTQQ--EYYEMELKNLQTRLEGEVAQLNet 481
Cdd:COG4942 86 AELEKEIAELRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQylKYLAPARREQAEELRADLAELA-- 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 482 hgktleelawkhhmAIEAVHSNASRDKIKLQTELEEQhKKEKLSLEEDKNQLQLELENLKQALGDKLTSANQEIDRLQDL 561
Cdd:COG4942 164 --------------ALRAELEAERAELEALLAELEEE-RAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEAL 228
|
....*.
gi 1958759141 562 VRKSEQ 567
Cdd:COG4942 229 IARLEA 234
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
176-460 |
8.81e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 40.32 E-value: 8.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 176 GQLQVQFENDKQSALEELRTthrlEVQELLRSQEDHSASMNLGQEKAEELhRREVEALNNTLEELR-LEKKELIEEYEGk 254
Cdd:COG3096 824 GHLAVAFAPDPEAELAALRQ----RRSELERELAQHRAQEQQLRQQLDQL-KEQLQLLNKLLPQANlLADETLADRLEE- 897
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 255 lskaqlfYERELDNLKRSQLFTAESLQASRDKE---ADLRKEFQGQEAiLRKTIGKLKTELQMVQDEASSLLDKCQKL-- 329
Cdd:COG3096 898 -------LREELDAAQEAQAFIQQHGKALAQLEplvAVLQSDPEQFEQ-LQADYLQAKEQQRRLKQQIFALSEVVQRRph 969
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759141 330 -------QMALATAENNVQvLQKQLDDAKEGEMALLSKHKEVESELAAARERLQEQASDLVRKAShigMLQA-TQMTQEV 401
Cdd:COG3096 970 fsyedavGLLGENSDLNEK-LRARLEQAEEARREAREQLRQAQAQYSQYNQVLASLKSSRDAKQQ---TLQElEQELEEL 1045
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 1958759141 402 TIKDLESEKSRAHERLCQLEKERAFLQSRTQSLDEEQKQQELEMEKKVNEVKRTQQEYY 460
Cdd:COG3096 1046 GVQADAEAEERARIRRDELHEELSQNRSRRSQLEKQLTRCEAEMDSLQKRLRKAERDYK 1104
|
|
| |
