platelet endothelial aggregation receptor 1 isoform X2 [Rattus norvegicus]
Protein Classification
calcium-binding EGF-like domain-containing protein; tyrosinase family protein( domain architecture ID 11167424)
calcium-binding epidermal growth factor (EGF)-like domain-containing protein may play a crucial role in numerous protein-protein interactions| tyrosinase family protein such as tyrosinase, a metal-containing oxidase that catalyzes the initial and rate limiting step in the cascade of reactions leading to melanin production from tyrosine
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| EMI | pfam07546 | EMI domain; The Pfam alignment is truncated at the C-terminus and does not include the final ... |
24-94 | 1.70e-10 | ||
EMI domain; The Pfam alignment is truncated at the C-terminus and does not include the final cysteine defined in Callebaut et al. This is to stop the family overlapping with other domains. : Pssm-ID: 462204 Cd Length: 69 Bit Score: 57.82 E-value: 1.70e-10
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| Laminin_EGF | pfam00053 | Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six. |
620-665 | 1.69e-03 | ||
Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six. : Pssm-ID: 395007 Cd Length: 49 Bit Score: 37.33 E-value: 1.69e-03
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| EGF_CA super family | cl21504 | Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular ... |
535-580 | 7.65e-03 | ||
Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements. The actual alignment was detected with superfamily member pfam00053: Pssm-ID: 473889 Cd Length: 49 Bit Score: 35.41 E-value: 7.65e-03
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| Name | Accession | Description | Interval | E-value | ||
| EMI | pfam07546 | EMI domain; The Pfam alignment is truncated at the C-terminus and does not include the final ... |
24-94 | 1.70e-10 | ||
EMI domain; The Pfam alignment is truncated at the C-terminus and does not include the final cysteine defined in Callebaut et al. This is to stop the family overlapping with other domains. Pssm-ID: 462204 Cd Length: 69 Bit Score: 57.82 E-value: 1.70e-10
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| Laminin_EGF | pfam00053 | Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six. |
620-665 | 1.69e-03 | ||
Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six. Pssm-ID: 395007 Cd Length: 49 Bit Score: 37.33 E-value: 1.69e-03
|
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| Laminin_EGF | pfam00053 | Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six. |
535-580 | 7.65e-03 | ||
Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six. Pssm-ID: 395007 Cd Length: 49 Bit Score: 35.41 E-value: 7.65e-03
|
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| Name | Accession | Description | Interval | E-value | ||
| EMI | pfam07546 | EMI domain; The Pfam alignment is truncated at the C-terminus and does not include the final ... |
24-94 | 1.70e-10 | ||
EMI domain; The Pfam alignment is truncated at the C-terminus and does not include the final cysteine defined in Callebaut et al. This is to stop the family overlapping with other domains. Pssm-ID: 462204 Cd Length: 69 Bit Score: 57.82 E-value: 1.70e-10
|
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| Laminin_EGF | pfam00053 | Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six. |
620-665 | 1.69e-03 | ||
Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six. Pssm-ID: 395007 Cd Length: 49 Bit Score: 37.33 E-value: 1.69e-03
|
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| Laminin_EGF | pfam00053 | Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six. |
535-580 | 7.65e-03 | ||
Laminin EGF domain; This family is like pfam00008 but has 8 conserved cysteines instead of six. Pssm-ID: 395007 Cd Length: 49 Bit Score: 35.41 E-value: 7.65e-03
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| Blast search parameters | ||||
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