|
Name |
Accession |
Description |
Interval |
E-value |
| Nucleic_acid_bd |
pfam13820 |
Putative nucleic acid-binding region; This is a family of putative nucleic acid-binding ... |
48-190 |
2.61e-60 |
|
Putative nucleic acid-binding region; This is a family of putative nucleic acid-binding proteins. Several members are annotated as being nuclear receptor coactivator 6 proteins but this could not be confirmed.
:
Pssm-ID: 463988 Cd Length: 143 Bit Score: 203.43 E-value: 2.61e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 48 IFVAFKGNIDDkdFKWKLDTILQSVPGLLHMESSKLKVQKVEPWNSVRVTFNIPREAAERLRILAQSNNQQLRDLGILSV 127
Cdd:pfam13820 1 TFLAVKGNLRM--FQEKLDSIRENVAELLRTEKSKLKVRKVEPWNSVRVTFSIPREAALRLRLLAQHNDPRLRDLGILSV 78
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1958759467 128 QIEGEGAINLALG---QNRSQDVRMnGPVVSGNSVRMEAGFPMASGPGLIRMTSPATVMMPQGGNA 190
Cdd:pfam13820 79 QIEGEGPINLTLAtmvQNPADDIIL-GCSTQLNSQRAEQGWTMLSALGLISDALPLHLRLAESGEY 143
|
|
| Med15 super family |
cl26621 |
ARC105 or Med15 subunit of Mediator complex non-fungal; The approx. 70 residue Med15 domain of ... |
377-799 |
2.20e-11 |
|
ARC105 or Med15 subunit of Mediator complex non-fungal; The approx. 70 residue Med15 domain of the ARC-Mediator co-activator is a three-helix bundle with marked similarity to the KIX domain. The sterol regulatory element binding protein (SREBP) family of transcription activators use the ARC105 subunit to activate target genes in the regulation of cholesterol and fatty acid homeostasis. In addition, Med15 is a critical transducer of gene activation signals that control early metazoan development.
The actual alignment was detected with superfamily member pfam09606:
Pssm-ID: 312941 [Multi-domain] Cd Length: 732 Bit Score: 69.27 E-value: 2.20e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 377 QQASQAHTNFPQMSNPGQFTAPQMKSLQGGPS---RVPTPLQQPHLTNKSPASSPSSFQQGSPASSPTVNQTQQQMGPRP 453
Cdd:pfam09606 60 QQQPQGGQGNGGMGGGQQGMPDPINALQNLAGqgtRPQMMGPMGPGPGGPMGQQMGGPGTASNLLASLGRPQMPMGGAGF 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 454 PQNNPLSQGFQQPVSSPGRNP--MVQQGNVPPNFMVMQQQPPSQGPPSLHPGLGGMPKRLPPGFSAGQANPNFMQGQvps 531
Cdd:pfam09606 140 PSQMSRVGRMQPGGQAGGMMQpsSGQPGSGTPNQMGPNGGPGQGQAGGMNGGQQGPMGGQMPPQMGVPGMPGPADAG--- 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 532 ttaatpgnSGALQLQANQSVQHAGGQGAGPPQNQMQvshGPPNMMQPSLMGIHGNINNQQAGSSGVPQVTLGSMQGQPQQ 611
Cdd:pfam09606 217 --------AQMGQQAQANGGMNPQQMGGAPNQVAMQ---QQQPQQQGQQSQLGMGINQMQQMPQGVGGGAGQGGPGQPMG 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 612 GPPSQLMGMHQQIVPSQGQMAQQQGTLNPQNPMILSRAQLMPQGQMMVNAQNQNLGPSPQRMTPPKQMLPQQGPQMMAPh 691
Cdd:pfam09606 286 PPGQQPGAMPNVMSIGDQNNYQQQQTRQQQQQQGGNHPAAHQQQMNQSVGQGGQVVALGGLNHLETWNPGNFGGLGANP- 364
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 692 nqmMGPQGQVLLQQNPMIEQIMTNQMQGNKAQFNSQNQSNVMP------GPAQIMRGPTPNmQGNMVQFTGQMSGQMLPQ 765
Cdd:pfam09606 365 ---MQRGQPGMMSSPSPVPGQQVRQVTPNQFMRQSPQPSVPSPqgpgsqPPQSHPGGMIPS-PALIPSPSPQMSQQPAQQ 440
|
410 420 430
....*....|....*....|....*....|....
gi 1958759467 766 QGPVSNSPSQVMGIQGQVLRPPGPSPHMAQQHTD 799
Cdd:pfam09606 441 RTIGQDSPGGSLNTPGQSAVNSPLNPQEEQLYRE 474
|
|
| PHA03247 super family |
cl33720 |
large tegument protein UL36; Provisional |
151-482 |
7.91e-06 |
|
large tegument protein UL36; Provisional
The actual alignment was detected with superfamily member PHA03247:
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 51.48 E-value: 7.91e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 151 GPVVSGNSVRMEAGFPMASGPGLIRMTSPATVMMPQggnaSSSMMAPGPNPELQPRTPRPASQSDAMDPLLSGLHIQQQS 230
Cdd:PHA03247 2630 SPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPR----RARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPP 2705
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 231 HPSGSLPPAHHPMQPVPVNRQMNPANFPQLQQQQQQQQQQQQQQQQQQQQQLQTRPLQQHQQQQPQGIRPQFTAPTQVPV 310
Cdd:PHA03247 2706 PTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTR 2785
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 311 PPGWNQLPSGALQP-------PPAQGSLGPMTTNQGWKKAPLPSPMQAQLQARPSLAT--VQTPSHPPPPYPFGSQQASQ 381
Cdd:PHA03247 2786 PAVASLSESRESLPspwdpadPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPgpPPPSLPLGGSVAPGGDVRRR 2865
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 382 AHTNFPqMSNPGQFTAPQMKSL-QGGPSRVPTPLQQPHLTNKSPAS--SPSSFQQGSPASSPTVNQTQQQMGPRP----- 453
Cdd:PHA03247 2866 PPSRSP-AAKPAAPARPPVRRLaRPAVSRSTESFALPPDQPERPPQpqAPPPPQPQPQPPPPPQPQPPPPPPPRPqppla 2944
|
330 340
....*....|....*....|....*....
gi 1958759467 454 PQNNPLSQGFQQPVSSPGRNPMVQQGNVP 482
Cdd:PHA03247 2945 PTTDPAGAGEPSGAVPQPWLGALVPGRVA 2973
|
|
| PHA03247 super family |
cl33720 |
large tegument protein UL36; Provisional |
1052-1272 |
7.36e-04 |
|
large tegument protein UL36; Provisional
The actual alignment was detected with superfamily member PHA03247:
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 44.93 E-value: 7.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1052 PPRGPLNPDSQRVPMQQSgnVPVMVSLQGPASVPPSPDKQRMPMPVNTPLGSNSRKMVYQESPQNSSSP-LGEMPSLPEA 1130
Cdd:PHA03247 2744 VPAGPATPGGPARPARPP--TTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAvLAPAAALPPA 2821
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1131 ---GGSEVPSVSGGPSNMPSHLVVSQNQLMMTG--------PKPGPSPLSATQGATPQQPPVNSLPSshghhfPNVAAPT 1199
Cdd:PHA03247 2822 aspAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGsvapggdvRRRPPSRSPAAKPAAPARPPVRRLAR------PAVSRST 2895
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1958759467 1200 QTSRPKTPNRASPRPYYPQTPNNRPPSTEPSEISLSPERLnasiaglfPPQINIPLPPRPNLNRGFDQQGLNP 1272
Cdd:PHA03247 2896 ESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPP--------PPRPQPPLAPTTDPAGAGEPSGAVP 2960
|
|
| PHA03247 super family |
cl33720 |
large tegument protein UL36; Provisional |
1670-1937 |
1.58e-03 |
|
large tegument protein UL36; Provisional
The actual alignment was detected with superfamily member PHA03247:
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 43.77 E-value: 1.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1670 PSTIPATPLTTNSGLMPPSVAVVGPlhiPQNIKFSSAPVTPNVPSSSPAPniQTGRPLVLSSRATPVPLPSPPCTS---S 1746
Cdd:PHA03247 2735 LPAAPAPPAVPAGPATPGGPARPAR---PPTTAGPPAPAPPAAPAAGPPR--RLTRPAVASLSESRESLPSPWDPAdppA 2809
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1747 PVVAPNPSVQQVKELNPDEASPQTNTSAdQSTLPSSQPTTVVSPLLANSPGSSANRRSPVSSSKGKG------KVDKIGQ 1820
Cdd:PHA03247 2810 AVLAPAAALPPAASPAGPLPPPTSAQPT-APPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPaaparpPVRRLAR 2888
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1821 ILLTKACKKVtgSLEKGEEQYGADGETEGPGLETTTPGLMGTEQCSTELDSKTPTPSAPTllkmTSSPMGPSSTSTGPIL 1900
Cdd:PHA03247 2889 PAVSRSTESF--ALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPT----TDPAGAGEPSGAVPQP 2962
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 1958759467 1901 PGGALPTSVRSVVTTLVPSELIS---TAPTTKGNHGGITS 1937
Cdd:PHA03247 2963 WLGALVPGRVAVPRFRVPQPAPSreaPASSTPPLTGHSLS 3002
|
|
| Herpes_BLLF1 super family |
cl37540 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
1494-1813 |
2.00e-03 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
The actual alignment was detected with superfamily member pfam05109:
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 43.37 E-value: 2.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1494 SGAPNVTIKPPGLTDLEVTPPAVSGEDLKK-------ASVIPTLQDPSSKEPSNSLNLPHSNEPCSTLAHPELSEVSSNI 1566
Cdd:pfam05109 446 TGLPSSTHVPTNLTAPASTGPTVSTADVTSptpagttSGASPVTPSPSPRDNGTESKAPDMTSPTSAVTTPTPNATSPTP 525
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1567 APSIP-PVMSRPVSSSSISTPLPPNQITVFVTSNPITTSSNTSAALPTHLQSALMSTVVT-MPNVGNKVMvseGQSAAQS 1644
Cdd:pfam05109 526 AVTTPtPNATSPTLGKTSPTSAVTTPTPNATSPTPAVTTPTPNATIPTLGKTSPTSAVTTpTPNATSPTV---GETSPQA 602
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1645 NARPQFITpvfiNSSSIIQVMKGSQPSTIPATPLTTNSGLMPPSVAVVGPLHIPQNIKFSSAPVT----PNVPSSSP--A 1718
Cdd:pfam05109 603 NTTNHTLG----GTSSTPVVTSPPKNATSAVTTGQHNITSSSTSSMSLRPSSISETLSPSTSDNStshmPLLTSAHPtgG 678
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1719 PNIQTGRPLVLSSRATPVPLPSP-PCTSSPVVAPNPSVQQVK--ELNPDEASPQTNTSADQStlPSSQPTTVVSpllANS 1795
Cdd:pfam05109 679 ENITQVTPASTSTHHVSTSSPAPrPGTTSQASGPGNSSTSTKpgEVNVTKGTPPKNATSPQA--PSGQKTAVPT---VTS 753
|
330
....*....|....*...
gi 1958759467 1796 PGSSANRRSPVSSSKGKG 1813
Cdd:pfam05109 754 TGGKANSTTGGKHTTGHG 771
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Nucleic_acid_bd |
pfam13820 |
Putative nucleic acid-binding region; This is a family of putative nucleic acid-binding ... |
48-190 |
2.61e-60 |
|
Putative nucleic acid-binding region; This is a family of putative nucleic acid-binding proteins. Several members are annotated as being nuclear receptor coactivator 6 proteins but this could not be confirmed.
Pssm-ID: 463988 Cd Length: 143 Bit Score: 203.43 E-value: 2.61e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 48 IFVAFKGNIDDkdFKWKLDTILQSVPGLLHMESSKLKVQKVEPWNSVRVTFNIPREAAERLRILAQSNNQQLRDLGILSV 127
Cdd:pfam13820 1 TFLAVKGNLRM--FQEKLDSIRENVAELLRTEKSKLKVRKVEPWNSVRVTFSIPREAALRLRLLAQHNDPRLRDLGILSV 78
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1958759467 128 QIEGEGAINLALG---QNRSQDVRMnGPVVSGNSVRMEAGFPMASGPGLIRMTSPATVMMPQGGNA 190
Cdd:pfam13820 79 QIEGEGPINLTLAtmvQNPADDIIL-GCSTQLNSQRAEQGWTMLSALGLISDALPLHLRLAESGEY 143
|
|
| Med15 |
pfam09606 |
ARC105 or Med15 subunit of Mediator complex non-fungal; The approx. 70 residue Med15 domain of ... |
377-799 |
2.20e-11 |
|
ARC105 or Med15 subunit of Mediator complex non-fungal; The approx. 70 residue Med15 domain of the ARC-Mediator co-activator is a three-helix bundle with marked similarity to the KIX domain. The sterol regulatory element binding protein (SREBP) family of transcription activators use the ARC105 subunit to activate target genes in the regulation of cholesterol and fatty acid homeostasis. In addition, Med15 is a critical transducer of gene activation signals that control early metazoan development.
Pssm-ID: 312941 [Multi-domain] Cd Length: 732 Bit Score: 69.27 E-value: 2.20e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 377 QQASQAHTNFPQMSNPGQFTAPQMKSLQGGPS---RVPTPLQQPHLTNKSPASSPSSFQQGSPASSPTVNQTQQQMGPRP 453
Cdd:pfam09606 60 QQQPQGGQGNGGMGGGQQGMPDPINALQNLAGqgtRPQMMGPMGPGPGGPMGQQMGGPGTASNLLASLGRPQMPMGGAGF 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 454 PQNNPLSQGFQQPVSSPGRNP--MVQQGNVPPNFMVMQQQPPSQGPPSLHPGLGGMPKRLPPGFSAGQANPNFMQGQvps 531
Cdd:pfam09606 140 PSQMSRVGRMQPGGQAGGMMQpsSGQPGSGTPNQMGPNGGPGQGQAGGMNGGQQGPMGGQMPPQMGVPGMPGPADAG--- 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 532 ttaatpgnSGALQLQANQSVQHAGGQGAGPPQNQMQvshGPPNMMQPSLMGIHGNINNQQAGSSGVPQVTLGSMQGQPQQ 611
Cdd:pfam09606 217 --------AQMGQQAQANGGMNPQQMGGAPNQVAMQ---QQQPQQQGQQSQLGMGINQMQQMPQGVGGGAGQGGPGQPMG 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 612 GPPSQLMGMHQQIVPSQGQMAQQQGTLNPQNPMILSRAQLMPQGQMMVNAQNQNLGPSPQRMTPPKQMLPQQGPQMMAPh 691
Cdd:pfam09606 286 PPGQQPGAMPNVMSIGDQNNYQQQQTRQQQQQQGGNHPAAHQQQMNQSVGQGGQVVALGGLNHLETWNPGNFGGLGANP- 364
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 692 nqmMGPQGQVLLQQNPMIEQIMTNQMQGNKAQFNSQNQSNVMP------GPAQIMRGPTPNmQGNMVQFTGQMSGQMLPQ 765
Cdd:pfam09606 365 ---MQRGQPGMMSSPSPVPGQQVRQVTPNQFMRQSPQPSVPSPqgpgsqPPQSHPGGMIPS-PALIPSPSPQMSQQPAQQ 440
|
410 420 430
....*....|....*....|....*....|....
gi 1958759467 766 QGPVSNSPSQVMGIQGQVLRPPGPSPHMAQQHTD 799
Cdd:pfam09606 441 RTIGQDSPGGSLNTPGQSAVNSPLNPQEEQLYRE 474
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
166-539 |
3.19e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 52.63 E-value: 3.19e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 166 PMASGPGLIRMTSPATVMMPQGGNASSSMMAPGPNPELQPRTPRPASQSDAMDPLLSGLHIQQQSHPSGSLPPAHHP--- 242
Cdd:PHA03247 2614 PSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPtvg 2693
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 243 -----MQPVPVNRQMNPANFPQLQQQQQQQQQQQQQQQQQQQQQLQTRPLQQHQQQQPQGI----RPQFTAPTQVPVPPG 313
Cdd:PHA03247 2694 sltslADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGParpaRPPTTAGPPAPAPPA 2773
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 314 WNQLPSGALQPPPAQGSLGPMTTNQGWKKAPLPSPMqAQLQARPSLATVQTPSHPPPPYPFGSQQASQAHTNFPQMSNP- 392
Cdd:PHA03247 2774 APAAGPPRRLTRPAVASLSESRESLPSPWDPADPPA-AVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPl 2852
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 393 GQFTAPqmkslqGGPSRVPTPLQQPHLTNKSPASSPSSFQQGSPASSPTVNQTQQQMGPRPPqnnPLSQGFQQPVSSPGR 472
Cdd:PHA03247 2853 GGSVAP------GGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERP---PQPQAPPPPQPQPQP 2923
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1958759467 473 NPMVQQGNVPPnfmvmqqqPPSQGPPSLHPGLGGMPKRLPPGFSAGQANPNFMQGQVPSTTAATPGN 539
Cdd:PHA03247 2924 PPPPQPQPPPP--------PPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQP 2982
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
151-482 |
7.91e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 51.48 E-value: 7.91e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 151 GPVVSGNSVRMEAGFPMASGPGLIRMTSPATVMMPQggnaSSSMMAPGPNPELQPRTPRPASQSDAMDPLLSGLHIQQQS 230
Cdd:PHA03247 2630 SPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPR----RARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPP 2705
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 231 HPSGSLPPAHHPMQPVPVNRQMNPANFPQLQQQQQQQQQQQQQQQQQQQQQLQTRPLQQHQQQQPQGIRPQFTAPTQVPV 310
Cdd:PHA03247 2706 PTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTR 2785
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 311 PPGWNQLPSGALQP-------PPAQGSLGPMTTNQGWKKAPLPSPMQAQLQARPSLAT--VQTPSHPPPPYPFGSQQASQ 381
Cdd:PHA03247 2786 PAVASLSESRESLPspwdpadPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPgpPPPSLPLGGSVAPGGDVRRR 2865
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 382 AHTNFPqMSNPGQFTAPQMKSL-QGGPSRVPTPLQQPHLTNKSPAS--SPSSFQQGSPASSPTVNQTQQQMGPRP----- 453
Cdd:PHA03247 2866 PPSRSP-AAKPAAPARPPVRRLaRPAVSRSTESFALPPDQPERPPQpqAPPPPQPQPQPPPPPQPQPPPPPPPRPqppla 2944
|
330 340
....*....|....*....|....*....
gi 1958759467 454 PQNNPLSQGFQQPVSSPGRNPMVQQGNVP 482
Cdd:PHA03247 2945 PTTDPAGAGEPSGAVPQPWLGALVPGRVA 2973
|
|
| PABP-1234 |
TIGR01628 |
polyadenylate binding protein, human types 1, 2, 3, 4 family; These eukaryotic proteins ... |
615-786 |
1.61e-05 |
|
polyadenylate binding protein, human types 1, 2, 3, 4 family; These eukaryotic proteins recognize the poly-A of mRNA and consists of four tandem RNA recognition domains at the N-terminus (rrm: pfam00076) followed by a PABP-specific domain (pfam00658) at the C-terminus. The protein is involved in the transport of mRNA's from the nucleus to the cytoplasm. There are four paralogs in Homo sapiens which are expressed in testis, platelets, broadly expressed and of unknown tissue range.
Pssm-ID: 130689 [Multi-domain] Cd Length: 562 Bit Score: 49.81 E-value: 1.61e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 615 SQLMGMHQQIVPsqgqMAQQQGTLNPQNPMILSRAQLMPQGQMMVNAQNQNLGPSPQRMtPPKQMLPQQGPQMMAPhnqm 694
Cdd:TIGR01628 369 AHLQDQFMQLQP----RMRQLPMGSPMGGAMGQPPYYGQGPQQQFNGQPLGWPRMSMMP-TPMGPGGPLRPNGLAP---- 439
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 695 MGPQGQVLLQQNPMIEQimtNQMQGNKAQFNSQNQSNVMPGPAQimrGPTPNMQGNMVQFTGQMSgqmlpqqgpvSNSPS 774
Cdd:TIGR01628 440 MNAVRAPSRNAQNAAQK---PPMQPVMYPPNYQSLPLSQDLPQP---QSTASQGGQNKKLAQVLA----------SATPQ 503
|
170
....*....|..
gi 1958759467 775 QVMGIQGQVLRP 786
Cdd:TIGR01628 504 MQKQVLGERLFP 515
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1052-1272 |
7.36e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 44.93 E-value: 7.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1052 PPRGPLNPDSQRVPMQQSgnVPVMVSLQGPASVPPSPDKQRMPMPVNTPLGSNSRKMVYQESPQNSSSP-LGEMPSLPEA 1130
Cdd:PHA03247 2744 VPAGPATPGGPARPARPP--TTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAvLAPAAALPPA 2821
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1131 ---GGSEVPSVSGGPSNMPSHLVVSQNQLMMTG--------PKPGPSPLSATQGATPQQPPVNSLPSshghhfPNVAAPT 1199
Cdd:PHA03247 2822 aspAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGsvapggdvRRRPPSRSPAAKPAAPARPPVRRLAR------PAVSRST 2895
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1958759467 1200 QTSRPKTPNRASPRPYYPQTPNNRPPSTEPSEISLSPERLnasiaglfPPQINIPLPPRPNLNRGFDQQGLNP 1272
Cdd:PHA03247 2896 ESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPP--------PPRPQPPLAPTTDPAGAGEPSGAVP 2960
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1670-1937 |
1.58e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 43.77 E-value: 1.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1670 PSTIPATPLTTNSGLMPPSVAVVGPlhiPQNIKFSSAPVTPNVPSSSPAPniQTGRPLVLSSRATPVPLPSPPCTS---S 1746
Cdd:PHA03247 2735 LPAAPAPPAVPAGPATPGGPARPAR---PPTTAGPPAPAPPAAPAAGPPR--RLTRPAVASLSESRESLPSPWDPAdppA 2809
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1747 PVVAPNPSVQQVKELNPDEASPQTNTSAdQSTLPSSQPTTVVSPLLANSPGSSANRRSPVSSSKGKG------KVDKIGQ 1820
Cdd:PHA03247 2810 AVLAPAAALPPAASPAGPLPPPTSAQPT-APPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPaaparpPVRRLAR 2888
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1821 ILLTKACKKVtgSLEKGEEQYGADGETEGPGLETTTPGLMGTEQCSTELDSKTPTPSAPTllkmTSSPMGPSSTSTGPIL 1900
Cdd:PHA03247 2889 PAVSRSTESF--ALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPT----TDPAGAGEPSGAVPQP 2962
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 1958759467 1901 PGGALPTSVRSVVTTLVPSELIS---TAPTTKGNHGGITS 1937
Cdd:PHA03247 2963 WLGALVPGRVAVPRFRVPQPAPSreaPASSTPPLTGHSLS 3002
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
1494-1813 |
2.00e-03 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 43.37 E-value: 2.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1494 SGAPNVTIKPPGLTDLEVTPPAVSGEDLKK-------ASVIPTLQDPSSKEPSNSLNLPHSNEPCSTLAHPELSEVSSNI 1566
Cdd:pfam05109 446 TGLPSSTHVPTNLTAPASTGPTVSTADVTSptpagttSGASPVTPSPSPRDNGTESKAPDMTSPTSAVTTPTPNATSPTP 525
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1567 APSIP-PVMSRPVSSSSISTPLPPNQITVFVTSNPITTSSNTSAALPTHLQSALMSTVVT-MPNVGNKVMvseGQSAAQS 1644
Cdd:pfam05109 526 AVTTPtPNATSPTLGKTSPTSAVTTPTPNATSPTPAVTTPTPNATIPTLGKTSPTSAVTTpTPNATSPTV---GETSPQA 602
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1645 NARPQFITpvfiNSSSIIQVMKGSQPSTIPATPLTTNSGLMPPSVAVVGPLHIPQNIKFSSAPVT----PNVPSSSP--A 1718
Cdd:pfam05109 603 NTTNHTLG----GTSSTPVVTSPPKNATSAVTTGQHNITSSSTSSMSLRPSSISETLSPSTSDNStshmPLLTSAHPtgG 678
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1719 PNIQTGRPLVLSSRATPVPLPSP-PCTSSPVVAPNPSVQQVK--ELNPDEASPQTNTSADQStlPSSQPTTVVSpllANS 1795
Cdd:pfam05109 679 ENITQVTPASTSTHHVSTSSPAPrPGTTSQASGPGNSSTSTKpgEVNVTKGTPPKNATSPQA--PSGQKTAVPT---VTS 753
|
330
....*....|....*...
gi 1958759467 1796 PGSSANRRSPVSSSKGKG 1813
Cdd:pfam05109 754 TGGKANSTTGGKHTTGHG 771
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
1103-1409 |
2.69e-03 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 42.98 E-value: 2.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1103 SNSRKMVYQESPQNSSSPlgemPSLPEAGGSEVPSVSGGPSN--MPSHLVV--SQNQLMMTGPKPGPSPLSATQGATPQQ 1178
Cdd:pfam05109 414 TTTHKVIFSKAPESTTTS----PTLNTTGFAAPNTTTGLPSSthVPTNLTApaSTGPTVSTADVTSPTPAGTTSGASPVT 489
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1179 PPVNSLPSSHGHHFPNVAAPTQTSRPKTPNRASPRPYYPQ-TPNNRPPS---TEPSEISLSPErlnasiaglfpPQINIP 1254
Cdd:pfam05109 490 PSPSPRDNGTESKAPDMTSPTSAVTTPTPNATSPTPAVTTpTPNATSPTlgkTSPTSAVTTPT-----------PNATSP 558
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1255 LPPRPNLNRGFDQQGLNPTTLKAIGQAPSNLTVSNPPNFAAPQAHKLDSVVvsSGKQSNPGTT---KRASPSNSRRSSPG 1331
Cdd:pfam05109 559 TPAVTTPTPNATIPTLGKTSPTSAVTTPTPNATSPTVGETSPQANTTNHTL--GGTSSTPVVTsppKNATSAVTTGQHNI 636
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1958759467 1332 SSRKTTPSPGRQNSKAPklTLASQTSTTLLQNMELprnvLVGPTPLANPPLSGSFPNNNGLNSQNPTVPAPAVGTVVE 1409
Cdd:pfam05109 637 TSSSTSSMSLRPSSISE--TLSPSTSDNSTSHMPL----LTSAHPTGGENITQVTPASTSTHHVSTSSPAPRPGTTSQ 708
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
199-579 |
2.75e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 43.00 E-value: 2.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 199 PNPELQPRTPRPASQSDAMDPllsGLHIQQ--------------QSHPSGSLPPAHHPMQPVPVNRQMNPANFPQLQQQQ 264
Cdd:PHA03247 2569 PPPRPAPRPSEPAVTSRARRP---DAPPQSarprapvddrgdprGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPT 2645
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 265 QQQQQQQQQQQQQQQQQLQTRplqqhqqQQPQGIRPQFTAPTQVPVPPGWNQL--PSGALQPPPAQGSlGPMTTNQGWKK 342
Cdd:PHA03247 2646 VPPPERPRDDPAPGRVSRPRR-------ARRLGRAAQASSPPQRPRRRAARPTvgSLTSLADPPPPPP-TPEPAPHALVS 2717
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 343 A-PLPSPMQAQLQARPSLATVQTPSHPPPPYPFGSQQASQAHTnfPQMSNPGQFTAPQMKSlqGGPSRVPTPLQQPHLTN 421
Cdd:PHA03247 2718 AtPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARP--PTTAGPPAPAPPAAPA--AGPPRRLTRPAVASLSE 2793
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 422 KSPA----SSPSSFQQGSPASSPTVNQTQQQMGPRPPQNNPLsQGFQQPVSSPGRNPMVQQGNVPPNFMVM----QQQPP 493
Cdd:PHA03247 2794 SRESlpspWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQ-PTAPPPPPGPPPPSLPLGGSVAPGGDVRrrppSRSPA 2872
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 494 SQGPPSLHPGLGGMPKRLPPGFSAGQANPNFMQGQVPSTTAATPGNSGAlQLQANQSVQHAgGQGAGPPQNQMQVSHGPP 573
Cdd:PHA03247 2873 AKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQP-QPPPPPQPQPP-PPPPPRPQPPLAPTTDPA 2950
|
....*.
gi 1958759467 574 NMMQPS 579
Cdd:PHA03247 2951 GAGEPS 2956
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
1528-1898 |
5.07e-03 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 41.83 E-value: 5.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1528 PTLQDPSSKEPSNSLNLPHSNEPCSTLAHPELSEVSSNIAPSIPPVMSRPVSSSSISTPLPPNQITVFVTSNPITTSSNT 1607
Cdd:pfam05109 432 PTLNTTGFAAPNTTTGLPSSTHVPTNLTAPASTGPTVSTADVTSPTPAGTTSGASPVTPSPSPRDNGTESKAPDMTSPTS 511
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1608 SAALPTHLQSALMSTVVT-MPNVGNKVMVSEGQSAAQSNARPQFITPVFINSSSIIQVMKGSQPSTIPATPLTTNS-GLM 1685
Cdd:pfam05109 512 AVTTPTPNATSPTPAVTTpTPNATSPTLGKTSPTSAVTTPTPNATSPTPAVTTPTPNATIPTLGKTSPTSAVTTPTpNAT 591
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1686 PPSVAVVGPLHIPQNIKFSSAPVTPNV--PSSSPAPNIQTGRPLVLSSRATPVPLpsPPCTSSPVVAPNPSVQQVKELN- 1762
Cdd:pfam05109 592 SPTVGETSPQANTTNHTLGGTSSTPVVtsPPKNATSAVTTGQHNITSSSTSSMSL--RPSSISETLSPSTSDNSTSHMPl 669
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1763 PDEASPQTNTSADQSTLPSSQPTTVVSPLLANSPGSSANRRSPVSSSKGKgkvdKIGQILLTKACKKVTGSLEKGEE--- 1839
Cdd:pfam05109 670 LTSAHPTGGENITQVTPASTSTHHVSTSSPAPRPGTTSQASGPGNSSTST----KPGEVNVTKGTPPKNATSPQAPSgqk 745
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1958759467 1840 -------QYGADGETEGPGLETTTPGLMGTEQCSTELDSKTPTP-----SAPTLLKMTSSPMGPSSTSTGP 1898
Cdd:pfam05109 746 tavptvtSTGGKANSTTGGKHTTGHGARTSTEPTTDYGGDSTTPrtrynATTYLPPSTSSKLRPRWTFTSP 816
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Nucleic_acid_bd |
pfam13820 |
Putative nucleic acid-binding region; This is a family of putative nucleic acid-binding ... |
48-190 |
2.61e-60 |
|
Putative nucleic acid-binding region; This is a family of putative nucleic acid-binding proteins. Several members are annotated as being nuclear receptor coactivator 6 proteins but this could not be confirmed.
Pssm-ID: 463988 Cd Length: 143 Bit Score: 203.43 E-value: 2.61e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 48 IFVAFKGNIDDkdFKWKLDTILQSVPGLLHMESSKLKVQKVEPWNSVRVTFNIPREAAERLRILAQSNNQQLRDLGILSV 127
Cdd:pfam13820 1 TFLAVKGNLRM--FQEKLDSIRENVAELLRTEKSKLKVRKVEPWNSVRVTFSIPREAALRLRLLAQHNDPRLRDLGILSV 78
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1958759467 128 QIEGEGAINLALG---QNRSQDVRMnGPVVSGNSVRMEAGFPMASGPGLIRMTSPATVMMPQGGNA 190
Cdd:pfam13820 79 QIEGEGPINLTLAtmvQNPADDIIL-GCSTQLNSQRAEQGWTMLSALGLISDALPLHLRLAESGEY 143
|
|
| Med15 |
pfam09606 |
ARC105 or Med15 subunit of Mediator complex non-fungal; The approx. 70 residue Med15 domain of ... |
377-799 |
2.20e-11 |
|
ARC105 or Med15 subunit of Mediator complex non-fungal; The approx. 70 residue Med15 domain of the ARC-Mediator co-activator is a three-helix bundle with marked similarity to the KIX domain. The sterol regulatory element binding protein (SREBP) family of transcription activators use the ARC105 subunit to activate target genes in the regulation of cholesterol and fatty acid homeostasis. In addition, Med15 is a critical transducer of gene activation signals that control early metazoan development.
Pssm-ID: 312941 [Multi-domain] Cd Length: 732 Bit Score: 69.27 E-value: 2.20e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 377 QQASQAHTNFPQMSNPGQFTAPQMKSLQGGPS---RVPTPLQQPHLTNKSPASSPSSFQQGSPASSPTVNQTQQQMGPRP 453
Cdd:pfam09606 60 QQQPQGGQGNGGMGGGQQGMPDPINALQNLAGqgtRPQMMGPMGPGPGGPMGQQMGGPGTASNLLASLGRPQMPMGGAGF 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 454 PQNNPLSQGFQQPVSSPGRNP--MVQQGNVPPNFMVMQQQPPSQGPPSLHPGLGGMPKRLPPGFSAGQANPNFMQGQvps 531
Cdd:pfam09606 140 PSQMSRVGRMQPGGQAGGMMQpsSGQPGSGTPNQMGPNGGPGQGQAGGMNGGQQGPMGGQMPPQMGVPGMPGPADAG--- 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 532 ttaatpgnSGALQLQANQSVQHAGGQGAGPPQNQMQvshGPPNMMQPSLMGIHGNINNQQAGSSGVPQVTLGSMQGQPQQ 611
Cdd:pfam09606 217 --------AQMGQQAQANGGMNPQQMGGAPNQVAMQ---QQQPQQQGQQSQLGMGINQMQQMPQGVGGGAGQGGPGQPMG 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 612 GPPSQLMGMHQQIVPSQGQMAQQQGTLNPQNPMILSRAQLMPQGQMMVNAQNQNLGPSPQRMTPPKQMLPQQGPQMMAPh 691
Cdd:pfam09606 286 PPGQQPGAMPNVMSIGDQNNYQQQQTRQQQQQQGGNHPAAHQQQMNQSVGQGGQVVALGGLNHLETWNPGNFGGLGANP- 364
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 692 nqmMGPQGQVLLQQNPMIEQIMTNQMQGNKAQFNSQNQSNVMP------GPAQIMRGPTPNmQGNMVQFTGQMSGQMLPQ 765
Cdd:pfam09606 365 ---MQRGQPGMMSSPSPVPGQQVRQVTPNQFMRQSPQPSVPSPqgpgsqPPQSHPGGMIPS-PALIPSPSPQMSQQPAQQ 440
|
410 420 430
....*....|....*....|....*....|....
gi 1958759467 766 QGPVSNSPSQVMGIQGQVLRPPGPSPHMAQQHTD 799
Cdd:pfam09606 441 RTIGQDSPGGSLNTPGQSAVNSPLNPQEEQLYRE 474
|
|
| Med15 |
pfam09606 |
ARC105 or Med15 subunit of Mediator complex non-fungal; The approx. 70 residue Med15 domain of ... |
268-744 |
3.59e-08 |
|
ARC105 or Med15 subunit of Mediator complex non-fungal; The approx. 70 residue Med15 domain of the ARC-Mediator co-activator is a three-helix bundle with marked similarity to the KIX domain. The sterol regulatory element binding protein (SREBP) family of transcription activators use the ARC105 subunit to activate target genes in the regulation of cholesterol and fatty acid homeostasis. In addition, Med15 is a critical transducer of gene activation signals that control early metazoan development.
Pssm-ID: 312941 [Multi-domain] Cd Length: 732 Bit Score: 58.87 E-value: 3.59e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 268 QQQQQQQQQQQQQQLQTRPLQQHQQQQPQGIRPQFTAptqvPVPPGwNQLPSGALQPPPAQGSLGPMTTNQGWKK---AP 344
Cdd:pfam09606 64 QGGQGNGGMGGGQQGMPDPINALQNLAGQGTRPQMMG----PMGPG-PGGPMGQQMGGPGTASNLLASLGRPQMPmggAG 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 345 LPSPMQAQLQARPSLATvqtpsHPPPPYPFGSQQASQAHTNFPQMSnPGQFTAPQMKSLQGGPSRVPTPLQ--------- 415
Cdd:pfam09606 139 FPSQMSRVGRMQPGGQA-----GGMMQPSSGQPGSGTPNQMGPNGG-PGQGQAGGMNGGQQGPMGGQMPPQmgvpgmpgp 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 416 ---QPHLTNKSPASSPSSFQQGSPASSPTVNQTQQQMgpRPPQNNPLSQGFQQPVSSPGRNPMVQQGNVPPNFMvmqqqp 492
Cdd:pfam09606 213 adaGAQMGQQAQANGGMNPQQMGGAPNQVAMQQQQPQ--QQGQQSQLGMGINQMQQMPQGVGGGAGQGGPGQPM------ 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 493 psqgppslhPGLGGMPKRLPPGFSAGQANPNFMQGQVPSTTAATPGNSGALQLQANQSVQHAGGQGAGPPQNQMQVshgp 572
Cdd:pfam09606 285 ---------GPPGQQPGAMPNVMSIGDQNNYQQQQTRQQQQQQGGNHPAAHQQQMNQSVGQGGQVVALGGLNHLET---- 351
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 573 pnmmqpslmGIHGNINNQQAGSSGVPQVTLGSM------QGQPQQGPPSQLMGMHQQIVPSQGQMAQQQGTLNPQNPMIL 646
Cdd:pfam09606 352 ---------WNPGNFGGLGANPMQRGQPGMMSSpspvpgQQVRQVTPNQFMRQSPQPSVPSPQGPGSQPPQSHPGGMIPS 422
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 647 SRAQLMPQGQMMVNAQNQNLGPSPQRMTPPKQMLPQQGPQMMAPHNQMMGPQGQVLLQQNPMIEQIMTNQMQGNKAQFNS 726
Cdd:pfam09606 423 PALIPSPSPQMSQQPAQQRTIGQDSPGGSLNTPGQSAVNSPLNPQEEQLYREKYRQLTKYIEPLKRMIAKMENDPGDIDK 502
|
490
....*....|....*...
gi 1958759467 727 QNQsnvMPGPAQIMRGPT 744
Cdd:pfam09606 503 MNK---MKRLLEILSNPS 517
|
|
| PAT1 |
pfam09770 |
Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate ... |
430-709 |
2.49e-07 |
|
Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate chromosome transmission during cell division.
Pssm-ID: 401645 [Multi-domain] Cd Length: 846 Bit Score: 56.20 E-value: 2.49e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 430 SFQQGSPASSPTVNQTQQQMGPRPPQNNPLSQGFQQPVSSpGRNPMVQQGNVPpnfmvmqqqppsqgppSLHP--GLGGM 507
Cdd:pfam09770 103 NRQQPAARAAQSSAQPPASSLPQYQYASQQSQQPSKPVRT-GYEKYKEPEPIP----------------DLQVdaSLWGV 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 508 PkrlPPGFSAGQANPnfmqgQVPSTTAATPGNS----------GALQLQANQSVQHAGGQGAGPPQNQMQVSHGPPNMMQ 577
Cdd:pfam09770 166 A---PKKAAAPAPAP-----QPAAQPASLPAPSrkmmsleeveAAMRAQAKKPAQQPAPAPAQPPAAPPAQQAQQQQQFP 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 578 PSlmgihgninnqqagssgvpqvtlgSMQGQPQQGPPSQLMGMHQQIVPSQGQMAQQQGTLNPQNPMILSRAQLMPQGQM 657
Cdd:pfam09770 238 PQ------------------------IQQQQQPQQQPQQPQQHPGQGHPVTILQRPQSPQPDPAQPSIQPQAQQFHQQPP 293
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 1958759467 658 MVNAQNQNLGPSPQRMTPPKQMLPQQGPQMMAP-HNQMMGPQGQVLLQQNPMI 709
Cdd:pfam09770 294 PVPVQPTQILQNPNRLSAARVGYPQNPQPGVQPaPAHQAHRQQGSFGRQAPII 346
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
166-539 |
3.19e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 52.63 E-value: 3.19e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 166 PMASGPGLIRMTSPATVMMPQGGNASSSMMAPGPNPELQPRTPRPASQSDAMDPLLSGLHIQQQSHPSGSLPPAHHP--- 242
Cdd:PHA03247 2614 PSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPtvg 2693
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 243 -----MQPVPVNRQMNPANFPQLQQQQQQQQQQQQQQQQQQQQQLQTRPLQQHQQQQPQGI----RPQFTAPTQVPVPPG 313
Cdd:PHA03247 2694 sltslADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGParpaRPPTTAGPPAPAPPA 2773
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 314 WNQLPSGALQPPPAQGSLGPMTTNQGWKKAPLPSPMqAQLQARPSLATVQTPSHPPPPYPFGSQQASQAHTNFPQMSNP- 392
Cdd:PHA03247 2774 APAAGPPRRLTRPAVASLSESRESLPSPWDPADPPA-AVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPl 2852
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 393 GQFTAPqmkslqGGPSRVPTPLQQPHLTNKSPASSPSSFQQGSPASSPTVNQTQQQMGPRPPqnnPLSQGFQQPVSSPGR 472
Cdd:PHA03247 2853 GGSVAP------GGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERP---PQPQAPPPPQPQPQP 2923
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1958759467 473 NPMVQQGNVPPnfmvmqqqPPSQGPPSLHPGLGGMPKRLPPGFSAGQANPNFMQGQVPSTTAATPGN 539
Cdd:PHA03247 2924 PPPPQPQPPPP--------PPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQP 2982
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
151-482 |
7.91e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 51.48 E-value: 7.91e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 151 GPVVSGNSVRMEAGFPMASGPGLIRMTSPATVMMPQggnaSSSMMAPGPNPELQPRTPRPASQSDAMDPLLSGLHIQQQS 230
Cdd:PHA03247 2630 SPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPR----RARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPP 2705
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 231 HPSGSLPPAHHPMQPVPVNRQMNPANFPQLQQQQQQQQQQQQQQQQQQQQQLQTRPLQQHQQQQPQGIRPQFTAPTQVPV 310
Cdd:PHA03247 2706 PTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTR 2785
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 311 PPGWNQLPSGALQP-------PPAQGSLGPMTTNQGWKKAPLPSPMQAQLQARPSLAT--VQTPSHPPPPYPFGSQQASQ 381
Cdd:PHA03247 2786 PAVASLSESRESLPspwdpadPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPgpPPPSLPLGGSVAPGGDVRRR 2865
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 382 AHTNFPqMSNPGQFTAPQMKSL-QGGPSRVPTPLQQPHLTNKSPAS--SPSSFQQGSPASSPTVNQTQQQMGPRP----- 453
Cdd:PHA03247 2866 PPSRSP-AAKPAAPARPPVRRLaRPAVSRSTESFALPPDQPERPPQpqAPPPPQPQPQPPPPPQPQPPPPPPPRPqppla 2944
|
330 340
....*....|....*....|....*....
gi 1958759467 454 PQNNPLSQGFQQPVSSPGRNPMVQQGNVP 482
Cdd:PHA03247 2945 PTTDPAGAGEPSGAVPQPWLGALVPGRVA 2973
|
|
| PABP-1234 |
TIGR01628 |
polyadenylate binding protein, human types 1, 2, 3, 4 family; These eukaryotic proteins ... |
615-786 |
1.61e-05 |
|
polyadenylate binding protein, human types 1, 2, 3, 4 family; These eukaryotic proteins recognize the poly-A of mRNA and consists of four tandem RNA recognition domains at the N-terminus (rrm: pfam00076) followed by a PABP-specific domain (pfam00658) at the C-terminus. The protein is involved in the transport of mRNA's from the nucleus to the cytoplasm. There are four paralogs in Homo sapiens which are expressed in testis, platelets, broadly expressed and of unknown tissue range.
Pssm-ID: 130689 [Multi-domain] Cd Length: 562 Bit Score: 49.81 E-value: 1.61e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 615 SQLMGMHQQIVPsqgqMAQQQGTLNPQNPMILSRAQLMPQGQMMVNAQNQNLGPSPQRMtPPKQMLPQQGPQMMAPhnqm 694
Cdd:TIGR01628 369 AHLQDQFMQLQP----RMRQLPMGSPMGGAMGQPPYYGQGPQQQFNGQPLGWPRMSMMP-TPMGPGGPLRPNGLAP---- 439
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 695 MGPQGQVLLQQNPMIEQimtNQMQGNKAQFNSQNQSNVMPGPAQimrGPTPNMQGNMVQFTGQMSgqmlpqqgpvSNSPS 774
Cdd:TIGR01628 440 MNAVRAPSRNAQNAAQK---PPMQPVMYPPNYQSLPLSQDLPQP---QSTASQGGQNKKLAQVLA----------SATPQ 503
|
170
....*....|..
gi 1958759467 775 QVMGIQGQVLRP 786
Cdd:TIGR01628 504 MQKQVLGERLFP 515
|
|
| PABP-1234 |
TIGR01628 |
polyadenylate binding protein, human types 1, 2, 3, 4 family; These eukaryotic proteins ... |
608-751 |
2.16e-05 |
|
polyadenylate binding protein, human types 1, 2, 3, 4 family; These eukaryotic proteins recognize the poly-A of mRNA and consists of four tandem RNA recognition domains at the N-terminus (rrm: pfam00076) followed by a PABP-specific domain (pfam00658) at the C-terminus. The protein is involved in the transport of mRNA's from the nucleus to the cytoplasm. There are four paralogs in Homo sapiens which are expressed in testis, platelets, broadly expressed and of unknown tissue range.
Pssm-ID: 130689 [Multi-domain] Cd Length: 562 Bit Score: 49.42 E-value: 2.16e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 608 QPQQGPPSQ-LMGMHQQIVPSQGQMAQQQGTLNPQNPMilsraqLMPQGQMMVNAQNQNLGPSPQRMTPPKQMLPQQGPQ 686
Cdd:TIGR01628 384 QLPMGSPMGgAMGQPPYYGQGPQQQFNGQPLGWPRMSM------MPTPMGPGGPLRPNGLAPMNAVRAPSRNAQNAAQKP 457
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1958759467 687 MMAPHNQMMGPQGQVLLQQNPmieqimtnQMQGNKAQFNSqnqsnvMPGPAQIMRGPTPNMQGNM 751
Cdd:TIGR01628 458 PMQPVMYPPNYQSLPLSQDLP--------QPQSTASQGGQ------NKKLAQVLASATPQMQKQV 508
|
|
| PAT1 |
pfam09770 |
Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate ... |
604-805 |
3.39e-05 |
|
Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate chromosome transmission during cell division.
Pssm-ID: 401645 [Multi-domain] Cd Length: 846 Bit Score: 49.26 E-value: 3.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 604 SMQGQPQQGPPSQLMGMHQQIVPSQGQMAQQQGTLNPQNPmilsrAQLMPQGQMMVNAQNQNLGPSPQRMTPPKQMLPQq 683
Cdd:pfam09770 202 AMRAQAKKPAQQPAPAPAQPPAAPPAQQAQQQQQFPPQIQ-----QQQQPQQQPQQPQQHPGQGHPVTILQRPQSPQPD- 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 684 gpqmmaPHNQMMGPQGQVLLQQNPmieqimtnqmqgnkaqfnsqnqsNVMPGPAQIMrgPTPNMQGNMVQftgQMSGQML 763
Cdd:pfam09770 276 ------PAQPSIQPQAQQFHQQPP-----------------------PVPVQPTQIL--QNPNRLSAARV---GYPQNPQ 321
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 1958759467 764 PQQGPVSNSPSQvmgiqgqvlRPPGPSPHMAQQHTDPATTAN 805
Cdd:pfam09770 322 PGVQPAPAHQAH---------RQQGSFGRQAPIITHPQQLAQ 354
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1052-1272 |
7.36e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 44.93 E-value: 7.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1052 PPRGPLNPDSQRVPMQQSgnVPVMVSLQGPASVPPSPDKQRMPMPVNTPLGSNSRKMVYQESPQNSSSP-LGEMPSLPEA 1130
Cdd:PHA03247 2744 VPAGPATPGGPARPARPP--TTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAvLAPAAALPPA 2821
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1131 ---GGSEVPSVSGGPSNMPSHLVVSQNQLMMTG--------PKPGPSPLSATQGATPQQPPVNSLPSshghhfPNVAAPT 1199
Cdd:PHA03247 2822 aspAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGsvapggdvRRRPPSRSPAAKPAAPARPPVRRLAR------PAVSRST 2895
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1958759467 1200 QTSRPKTPNRASPRPYYPQTPNNRPPSTEPSEISLSPERLnasiaglfPPQINIPLPPRPNLNRGFDQQGLNP 1272
Cdd:PHA03247 2896 ESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPP--------PPRPQPPLAPTTDPAGAGEPSGAVP 2960
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1081-1564 |
9.08e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 44.54 E-value: 9.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1081 PASVPPSPDK-----QRMPMPVNTPLGSNSRKMVYQESPQNSSSPLGEMPSLP-EAGGSEVPSVSGGPSNMPSHLVVSQN 1154
Cdd:PHA03247 2557 PAAPPAAPDRsvpppRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRgPAPPSPLPPDTHAPDPPPPSPSPAAN 2636
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1155 QLMMTGPKPGPSPLSATQGATPQQPPVNSLPSSHGHHfPNVAAPTQTSRPktpnRASPRPYYPQTPNNRPPSTEPSEISL 1234
Cdd:PHA03247 2637 EPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRA-AQASSPPQRPRR----RAARPTVGSLTSLADPPPPPPTPEPA 2711
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1235 SPERLNAsiaglfppqinIPLPPRPNLNRgfdqQGLNPTTLKAIGQAPSNLTVSnPPNFAAPQAHKLDSVVVSSGKQSNP 1314
Cdd:PHA03247 2712 PHALVSA-----------TPLPPGPAAAR----QASPALPAAPAPPAVPAGPAT-PGGPARPARPPTTAGPPAPAPPAAP 2775
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1315 GTTKRASPSNSRRSSPGSSRKTTPSPgRQNSKAPKLTLASQTSTTLLQNMELPRNVLVGPTPLANPPLSGSFPNnnglns 1394
Cdd:PHA03247 2776 AAGPPRRLTRPAVASLSESRESLPSP-WDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPP------ 2848
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1395 qnptvPAPAVGTVVEDNKESLNVPQDSDCQNSQGRKEQVNTELKAVPIQEAKMVVPEdqskkdgQPLDPNKLPSVEENKT 1474
Cdd:PHA03247 2849 -----SLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFAL-------PPDQPERPPQPQAPPP 2916
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1475 LMSPAMREAPTSLSQLLDNSGAPNVTIKPPGLTDLEVTPPAVSGEDLKKASVIPTLQDPSSKEPSNSLNLPHSNEPCSTL 1554
Cdd:PHA03247 2917 PQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPL 2996
|
490
....*....|
gi 1958759467 1555 AHPELSEVSS 1564
Cdd:PHA03247 2997 TGHSLSRVSS 3006
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1018-1408 |
9.47e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 44.54 E-value: 9.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1018 SQPQSQQQQQQMMMMLMMQQDPKSIRLPVSQNVHPPR----GPLNPDSQRVPMQQSGNVPVMVSLQG--PASVPPSPDKQ 1091
Cdd:PHA03247 2574 APRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGpappSPLPPDTHAPDPPPPSPSPAANEPDPhpPPTVPPPERPR 2653
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1092 RMPMPvntPLGSNSRKMVYQESPQNSSSPLG--EMPSLPEAGGS-----EVPSVSGGPSNMPSHLVVSQNQLMMTGPKPG 1164
Cdd:PHA03247 2654 DDPAP---GRVSRPRRARRLGRAAQASSPPQrpRRRAARPTVGSltslaDPPPPPPTPEPAPHALVSATPLPPGPAAARQ 2730
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1165 PSPLSATQGATPQQPPVNSLPsshghhfpnvAAPTQTSRPKTPNrASPRPYYPQTPNNRPP--STEPSEISLSPERLNAS 1242
Cdd:PHA03247 2731 ASPALPAAPAPPAVPAGPATP----------GGPARPARPPTTA-GPPAPAPPAAPAAGPPrrLTRPAVASLSESRESLP 2799
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1243 IAGLFPPQINIPLPPRPNLNRGFDQQGLNPTTLKAIGQAPSnltvsnPPNFAAPQAHKLDSVVVSSGKQSNPGTTKRASP 1322
Cdd:PHA03247 2800 SPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPP------PPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAA 2873
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1323 SNSRRSSPGSSRKTTPSPGRQNS---------KAPKLTLASQTSTTLLQNMELPRNVLVGPTPLANPPLSGSFPNNNGLN 1393
Cdd:PHA03247 2874 KPAAPARPPVRRLARPAVSRSTEsfalppdqpERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAG 2953
|
410
....*....|....*
gi 1958759467 1394 SQNPTVPAPAVGTVV 1408
Cdd:PHA03247 2954 EPSGAVPQPWLGALV 2968
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1670-1937 |
1.58e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 43.77 E-value: 1.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1670 PSTIPATPLTTNSGLMPPSVAVVGPlhiPQNIKFSSAPVTPNVPSSSPAPniQTGRPLVLSSRATPVPLPSPPCTS---S 1746
Cdd:PHA03247 2735 LPAAPAPPAVPAGPATPGGPARPAR---PPTTAGPPAPAPPAAPAAGPPR--RLTRPAVASLSESRESLPSPWDPAdppA 2809
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1747 PVVAPNPSVQQVKELNPDEASPQTNTSAdQSTLPSSQPTTVVSPLLANSPGSSANRRSPVSSSKGKG------KVDKIGQ 1820
Cdd:PHA03247 2810 AVLAPAAALPPAASPAGPLPPPTSAQPT-APPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPaaparpPVRRLAR 2888
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1821 ILLTKACKKVtgSLEKGEEQYGADGETEGPGLETTTPGLMGTEQCSTELDSKTPTPSAPTllkmTSSPMGPSSTSTGPIL 1900
Cdd:PHA03247 2889 PAVSRSTESF--ALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPT----TDPAGAGEPSGAVPQP 2962
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 1958759467 1901 PGGALPTSVRSVVTTLVPSELIS---TAPTTKGNHGGITS 1937
Cdd:PHA03247 2963 WLGALVPGRVAVPRFRVPQPAPSreaPASSTPPLTGHSLS 3002
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
1494-1813 |
2.00e-03 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 43.37 E-value: 2.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1494 SGAPNVTIKPPGLTDLEVTPPAVSGEDLKK-------ASVIPTLQDPSSKEPSNSLNLPHSNEPCSTLAHPELSEVSSNI 1566
Cdd:pfam05109 446 TGLPSSTHVPTNLTAPASTGPTVSTADVTSptpagttSGASPVTPSPSPRDNGTESKAPDMTSPTSAVTTPTPNATSPTP 525
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1567 APSIP-PVMSRPVSSSSISTPLPPNQITVFVTSNPITTSSNTSAALPTHLQSALMSTVVT-MPNVGNKVMvseGQSAAQS 1644
Cdd:pfam05109 526 AVTTPtPNATSPTLGKTSPTSAVTTPTPNATSPTPAVTTPTPNATIPTLGKTSPTSAVTTpTPNATSPTV---GETSPQA 602
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1645 NARPQFITpvfiNSSSIIQVMKGSQPSTIPATPLTTNSGLMPPSVAVVGPLHIPQNIKFSSAPVT----PNVPSSSP--A 1718
Cdd:pfam05109 603 NTTNHTLG----GTSSTPVVTSPPKNATSAVTTGQHNITSSSTSSMSLRPSSISETLSPSTSDNStshmPLLTSAHPtgG 678
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1719 PNIQTGRPLVLSSRATPVPLPSP-PCTSSPVVAPNPSVQQVK--ELNPDEASPQTNTSADQStlPSSQPTTVVSpllANS 1795
Cdd:pfam05109 679 ENITQVTPASTSTHHVSTSSPAPrPGTTSQASGPGNSSTSTKpgEVNVTKGTPPKNATSPQA--PSGQKTAVPT---VTS 753
|
330
....*....|....*...
gi 1958759467 1796 PGSSANRRSPVSSSKGKG 1813
Cdd:pfam05109 754 TGGKANSTTGGKHTTGHG 771
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
1103-1409 |
2.69e-03 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 42.98 E-value: 2.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1103 SNSRKMVYQESPQNSSSPlgemPSLPEAGGSEVPSVSGGPSN--MPSHLVV--SQNQLMMTGPKPGPSPLSATQGATPQQ 1178
Cdd:pfam05109 414 TTTHKVIFSKAPESTTTS----PTLNTTGFAAPNTTTGLPSSthVPTNLTApaSTGPTVSTADVTSPTPAGTTSGASPVT 489
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1179 PPVNSLPSSHGHHFPNVAAPTQTSRPKTPNRASPRPYYPQ-TPNNRPPS---TEPSEISLSPErlnasiaglfpPQINIP 1254
Cdd:pfam05109 490 PSPSPRDNGTESKAPDMTSPTSAVTTPTPNATSPTPAVTTpTPNATSPTlgkTSPTSAVTTPT-----------PNATSP 558
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1255 LPPRPNLNRGFDQQGLNPTTLKAIGQAPSNLTVSNPPNFAAPQAHKLDSVVvsSGKQSNPGTT---KRASPSNSRRSSPG 1331
Cdd:pfam05109 559 TPAVTTPTPNATIPTLGKTSPTSAVTTPTPNATSPTVGETSPQANTTNHTL--GGTSSTPVVTsppKNATSAVTTGQHNI 636
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1958759467 1332 SSRKTTPSPGRQNSKAPklTLASQTSTTLLQNMELprnvLVGPTPLANPPLSGSFPNNNGLNSQNPTVPAPAVGTVVE 1409
Cdd:pfam05109 637 TSSSTSSMSLRPSSISE--TLSPSTSDNSTSHMPL----LTSAHPTGGENITQVTPASTSTHHVSTSSPAPRPGTTSQ 708
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
199-579 |
2.75e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 43.00 E-value: 2.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 199 PNPELQPRTPRPASQSDAMDPllsGLHIQQ--------------QSHPSGSLPPAHHPMQPVPVNRQMNPANFPQLQQQQ 264
Cdd:PHA03247 2569 PPPRPAPRPSEPAVTSRARRP---DAPPQSarprapvddrgdprGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPT 2645
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 265 QQQQQQQQQQQQQQQQQLQTRplqqhqqQQPQGIRPQFTAPTQVPVPPGWNQL--PSGALQPPPAQGSlGPMTTNQGWKK 342
Cdd:PHA03247 2646 VPPPERPRDDPAPGRVSRPRR-------ARRLGRAAQASSPPQRPRRRAARPTvgSLTSLADPPPPPP-TPEPAPHALVS 2717
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 343 A-PLPSPMQAQLQARPSLATVQTPSHPPPPYPFGSQQASQAHTnfPQMSNPGQFTAPQMKSlqGGPSRVPTPLQQPHLTN 421
Cdd:PHA03247 2718 AtPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARP--PTTAGPPAPAPPAAPA--AGPPRRLTRPAVASLSE 2793
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 422 KSPA----SSPSSFQQGSPASSPTVNQTQQQMGPRPPQNNPLsQGFQQPVSSPGRNPMVQQGNVPPNFMVM----QQQPP 493
Cdd:PHA03247 2794 SRESlpspWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQ-PTAPPPPPGPPPPSLPLGGSVAPGGDVRrrppSRSPA 2872
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 494 SQGPPSLHPGLGGMPKRLPPGFSAGQANPNFMQGQVPSTTAATPGNSGAlQLQANQSVQHAgGQGAGPPQNQMQVSHGPP 573
Cdd:PHA03247 2873 AKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQP-QPPPPPQPQPP-PPPPPRPQPPLAPTTDPA 2950
|
....*.
gi 1958759467 574 NMMQPS 579
Cdd:PHA03247 2951 GAGEPS 2956
|
|
| PABP-1234 |
TIGR01628 |
polyadenylate binding protein, human types 1, 2, 3, 4 family; These eukaryotic proteins ... |
643-772 |
3.28e-03 |
|
polyadenylate binding protein, human types 1, 2, 3, 4 family; These eukaryotic proteins recognize the poly-A of mRNA and consists of four tandem RNA recognition domains at the N-terminus (rrm: pfam00076) followed by a PABP-specific domain (pfam00658) at the C-terminus. The protein is involved in the transport of mRNA's from the nucleus to the cytoplasm. There are four paralogs in Homo sapiens which are expressed in testis, platelets, broadly expressed and of unknown tissue range.
Pssm-ID: 130689 [Multi-domain] Cd Length: 562 Bit Score: 42.49 E-value: 3.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 643 PMILSRAQLMPQGQMMVNAQNQNLGPSPQRMTPPKQMLPQQGPQMM---APHnQMMGPQGQVLLQQNPMIEQIMTnqMQG 719
Cdd:TIGR01628 355 PLYVALAQRKEQRRAHLQDQFMQLQPRMRQLPMGSPMGGAMGQPPYygqGPQ-QQFNGQPLGWPRMSMMPTPMGP--GGP 431
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 1958759467 720 NKAQFNSQNQSNVMPGPAQIMRGPTPNMQGnmVQFTGQMSGQMLPQQGPVSNS 772
Cdd:TIGR01628 432 LRPNGLAPMNAVRAPSRNAQNAAQKPPMQP--VMYPPNYQSLPLSQDLPQPQS 482
|
|
| KAR9 |
pfam08580 |
Yeast cortical protein KAR9; The KAR9 protein in Saccharomyces cerevisiae is a cytoskeletal ... |
1159-1316 |
4.24e-03 |
|
Yeast cortical protein KAR9; The KAR9 protein in Saccharomyces cerevisiae is a cytoskeletal protein required for karyogamy, correct positioning of the mitotic spindle and for orientation of cytoplasmic microtubules. KAR9 localizes at the shmoo tip in mating cells and at the tip of the growing bud in anaphase.
Pssm-ID: 430088 [Multi-domain] Cd Length: 684 Bit Score: 42.12 E-value: 4.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1159 TGPKPGPSPlSATQGATPQQPPVNSLPSSHGHHFPNVAAPTQTSRPKTPNRASPRP---------YYPQTPNNRPPSTEP 1229
Cdd:pfam08580 511 TATSETPTP-ALRPPSRPQPPPPGNRPRWNASTNTNDLDVGHNFKPLTLTTPSPTPsrssrssstLPPVSPLSRDKSRSP 589
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1230 SEISLSPERLNASIAGLFPPQINIPLPPRPNLNrgfdqqglNPTTLKAIGQAPSNLTVSNPPNFAAPQAHKLDSVVVSSG 1309
Cdd:pfam08580 590 APTCRSVSRASRRRASRKPTRIGSPNSRTSLLD--------EPPYPKLTLSKGLPRTPRNRQSYAGTSPSRSVSVSSGLG 661
|
....*..
gi 1958759467 1310 KQSNPGT 1316
Cdd:pfam08580 662 PQTRPGT 668
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
1528-1898 |
5.07e-03 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 41.83 E-value: 5.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1528 PTLQDPSSKEPSNSLNLPHSNEPCSTLAHPELSEVSSNIAPSIPPVMSRPVSSSSISTPLPPNQITVFVTSNPITTSSNT 1607
Cdd:pfam05109 432 PTLNTTGFAAPNTTTGLPSSTHVPTNLTAPASTGPTVSTADVTSPTPAGTTSGASPVTPSPSPRDNGTESKAPDMTSPTS 511
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1608 SAALPTHLQSALMSTVVT-MPNVGNKVMVSEGQSAAQSNARPQFITPVFINSSSIIQVMKGSQPSTIPATPLTTNS-GLM 1685
Cdd:pfam05109 512 AVTTPTPNATSPTPAVTTpTPNATSPTLGKTSPTSAVTTPTPNATSPTPAVTTPTPNATIPTLGKTSPTSAVTTPTpNAT 591
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1686 PPSVAVVGPLHIPQNIKFSSAPVTPNV--PSSSPAPNIQTGRPLVLSSRATPVPLpsPPCTSSPVVAPNPSVQQVKELN- 1762
Cdd:pfam05109 592 SPTVGETSPQANTTNHTLGGTSSTPVVtsPPKNATSAVTTGQHNITSSSTSSMSL--RPSSISETLSPSTSDNSTSHMPl 669
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 1763 PDEASPQTNTSADQSTLPSSQPTTVVSPLLANSPGSSANRRSPVSSSKGKgkvdKIGQILLTKACKKVTGSLEKGEE--- 1839
Cdd:pfam05109 670 LTSAHPTGGENITQVTPASTSTHHVSTSSPAPRPGTTSQASGPGNSSTST----KPGEVNVTKGTPPKNATSPQAPSgqk 745
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1958759467 1840 -------QYGADGETEGPGLETTTPGLMGTEQCSTELDSKTPTP-----SAPTLLKMTSSPMGPSSTSTGP 1898
Cdd:pfam05109 746 tavptvtSTGGKANSTTGGKHTTGHGARTSTEPTTDYGGDSTTPrtrynATTYLPPSTSSKLRPRWTFTSP 816
|
|
| PABP-1234 |
TIGR01628 |
polyadenylate binding protein, human types 1, 2, 3, 4 family; These eukaryotic proteins ... |
711-823 |
5.80e-03 |
|
polyadenylate binding protein, human types 1, 2, 3, 4 family; These eukaryotic proteins recognize the poly-A of mRNA and consists of four tandem RNA recognition domains at the N-terminus (rrm: pfam00076) followed by a PABP-specific domain (pfam00658) at the C-terminus. The protein is involved in the transport of mRNA's from the nucleus to the cytoplasm. There are four paralogs in Homo sapiens which are expressed in testis, platelets, broadly expressed and of unknown tissue range.
Pssm-ID: 130689 [Multi-domain] Cd Length: 562 Bit Score: 41.72 E-value: 5.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 711 QIMTNQMQGNKAQFNSQNQSNVMPG--PAQIMRGPTPNMQGNMVQFTGQMSGQMLPQQGPvsNSPSQVMGIQ--GQVLRP 786
Cdd:TIGR01628 369 AHLQDQFMQLQPRMRQLPMGSPMGGamGQPPYYGQGPQQQFNGQPLGWPRMSMMPTPMGP--GGPLRPNGLApmNAVRAP 446
|
90 100 110
....*....|....*....|....*....|....*..
gi 1958759467 787 PGPSPHMAQQHTDPATTANNDVNLSQMMPDVSMQQTS 823
Cdd:TIGR01628 447 SRNAQNAAQKPPMQPVMYPPNYQSLPLSQDLPQPQST 483
|
|
| PABP-1234 |
TIGR01628 |
polyadenylate binding protein, human types 1, 2, 3, 4 family; These eukaryotic proteins ... |
671-837 |
6.05e-03 |
|
polyadenylate binding protein, human types 1, 2, 3, 4 family; These eukaryotic proteins recognize the poly-A of mRNA and consists of four tandem RNA recognition domains at the N-terminus (rrm: pfam00076) followed by a PABP-specific domain (pfam00658) at the C-terminus. The protein is involved in the transport of mRNA's from the nucleus to the cytoplasm. There are four paralogs in Homo sapiens which are expressed in testis, platelets, broadly expressed and of unknown tissue range.
Pssm-ID: 130689 [Multi-domain] Cd Length: 562 Bit Score: 41.72 E-value: 6.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 671 QRMTPPKQMLPQQGPQMMAPH--NQMMGPQGQVLL-QQNPmieqimtnQMQGNKAQFNSQNQSNvMPGPAQIMRGPTPNM 747
Cdd:TIGR01628 366 QRRAHLQDQFMQLQPRMRQLPmgSPMGGAMGQPPYyGQGP--------QQQFNGQPLGWPRMSM-MPTPMGPGGPLRPNG 436
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958759467 748 QGNMVQFTGQMSGQmlpQQGPVSNSPsqvMGIQGQVLRPPGPSPHMAQQHTDPATTANNDVNLSQMMPDVSMQ-QTSMVP 826
Cdd:TIGR01628 437 LAPMNAVRAPSRNA---QNAAQKPPM---QPVMYPPNYQSLPLSQDLPQPQSTASQGGQNKKLAQVLASATPQmQKQVLG 510
|
170
....*....|....*
gi 1958759467 827 ----PHVQSMQGNSA 837
Cdd:TIGR01628 511 erlfPLVEAIEPALA 525
|
|
| |
