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Conserved domains on  [gi|1958764970|ref|XP_038962153|]
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complement C5 isoform X7 [Rattus norvegicus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
MG1 pfam17790
Macroglobulin domain MG1; This entry represents the N-terminal macroglobulin domain found in ...
 32-128 1.53e-21

Macroglobulin domain MG1; This entry represents the N-terminal macroglobulin domain found in complement proteins C3, C4 and C5.


:

Pssm-ID: 465508  Cd Length: 101  Bit Score: 83.55  E-value: 1.53e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958764970  32 YIISTPIVFRVGAPENVTVQAYGYTEAFDTTISVKSYPNKNVNYSSGTVELSPENKFQNSAILTIQAQELSEEQNWFSNV 111
Cdd:pfam17790   4 YLLTAPNVLRVESEENIVVEAHGYTAPVEVTITVMDFPDKKALLASTSVTLNSDNNYQALVTIKIPAKLFRKDRKGKQYV 83

                          90
                  ....*....|....*..
gi 1958764970 112 YSEVVSKHFSKLEIMPI 128
Cdd:pfam17790  84 YLQAKFPHFELEKVVLV 100
 
Name Accession Description Interval E-value
MG1 pfam17790
Macroglobulin domain MG1; This entry represents the N-terminal macroglobulin domain found in ...
 32-128 1.53e-21

Macroglobulin domain MG1; This entry represents the N-terminal macroglobulin domain found in complement proteins C3, C4 and C5.


Pssm-ID: 465508  Cd Length: 101  Bit Score: 83.55  E-value: 1.53e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958764970  32 YIISTPIVFRVGAPENVTVQAYGYTEAFDTTISVKSYPNKNVNYSSGTVELSPENKFQNSAILTIQAQELSEEQNWFSNV 111
Cdd:pfam17790   4 YLLTAPNVLRVESEENIVVEAHGYTAPVEVTITVMDFPDKKALLASTSVTLNSDNNYQALVTIKIPAKLFRKDRKGKQYV 83

                          90
                  ....*....|....*..
gi 1958764970 112 YSEVVSKHFSKLEIMPI 128
Cdd:pfam17790  84 YLQAKFPHFELEKVVLV 100
 
Name Accession Description Interval E-value
MG1 pfam17790
Macroglobulin domain MG1; This entry represents the N-terminal macroglobulin domain found in ...
 32-128 1.53e-21

Macroglobulin domain MG1; This entry represents the N-terminal macroglobulin domain found in complement proteins C3, C4 and C5.


Pssm-ID: 465508  Cd Length: 101  Bit Score: 83.55  E-value: 1.53e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958764970  32 YIISTPIVFRVGAPENVTVQAYGYTEAFDTTISVKSYPNKNVNYSSGTVELSPENKFQNSAILTIQAQELSEEQNWFSNV 111
Cdd:pfam17790   4 YLLTAPNVLRVESEENIVVEAHGYTAPVEVTITVMDFPDKKALLASTSVTLNSDNNYQALVTIKIPAKLFRKDRKGKQYV 83

                          90
                  ....*....|....*..
gi 1958764970 112 YSEVVSKHFSKLEIMPI 128
Cdd:pfam17790  84 YLQAKFPHFELEKVVLV 100
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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