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Conserved domains on  [gi|1958770886|ref|XP_038964057|]
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protein FAM221A isoform X3 [Rattus norvegicus]

Protein Classification

FAM221 domain-containing protein( domain architecture ID 10631724)

FAM221 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FAM221 pfam14753
Protein FAM221A/B; This family of proteins is found in eukaryotes. Proteins in this family are ...
 20-143 2.17e-89

Protein FAM221A/B; This family of proteins is found in eukaryotes. Proteins in this family are typically between 99 and 305 amino acids in length.


:

Pssm-ID: 464299  Cd Length: 196  Bit Score: 261.52  E-value: 2.17e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958770886  20 YRRIVGEDDGGKLFTPEEYEEYKKKVLPMRLQNRLFVSWRSPTGMDCKLVGPETLCFCTHRYKQHKTDFETVPQQRPIDL 99
Cdd:pfam14753   1 YRRIVGDDDGGKLFTPEEYEEYKKKVLPQRLKNRLYVSWGNPGGMDCKLVGPETPCFCTHRYKQHKTDFEVLPKERPISL 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 1958770886 100 PCRVTGCQCKAYHYVPLNGTQPIRCRCKHFADQHSPALGFTCNA 143
Cdd:pfam14753  81 PCRVKGCRCSSYHYVPRNGSQPVRCRCKHSADEHSEAAPHLCKK 124
 
Name Accession Description Interval E-value
FAM221 pfam14753
Protein FAM221A/B; This family of proteins is found in eukaryotes. Proteins in this family are ...
 20-143 2.17e-89

Protein FAM221A/B; This family of proteins is found in eukaryotes. Proteins in this family are typically between 99 and 305 amino acids in length.


Pssm-ID: 464299  Cd Length: 196  Bit Score: 261.52  E-value: 2.17e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958770886  20 YRRIVGEDDGGKLFTPEEYEEYKKKVLPMRLQNRLFVSWRSPTGMDCKLVGPETLCFCTHRYKQHKTDFETVPQQRPIDL 99
Cdd:pfam14753   1 YRRIVGDDDGGKLFTPEEYEEYKKKVLPQRLKNRLYVSWGNPGGMDCKLVGPETPCFCTHRYKQHKTDFEVLPKERPISL 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 1958770886 100 PCRVTGCQCKAYHYVPLNGTQPIRCRCKHFADQHSPALGFTCNA 143
Cdd:pfam14753  81 PCRVKGCRCSSYHYVPRNGSQPVRCRCKHSADEHSEAAPHLCKK 124
 
Name Accession Description Interval E-value
FAM221 pfam14753
Protein FAM221A/B; This family of proteins is found in eukaryotes. Proteins in this family are ...
 20-143 2.17e-89

Protein FAM221A/B; This family of proteins is found in eukaryotes. Proteins in this family are typically between 99 and 305 amino acids in length.


Pssm-ID: 464299  Cd Length: 196  Bit Score: 261.52  E-value: 2.17e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958770886  20 YRRIVGEDDGGKLFTPEEYEEYKKKVLPMRLQNRLFVSWRSPTGMDCKLVGPETLCFCTHRYKQHKTDFETVPQQRPIDL 99
Cdd:pfam14753   1 YRRIVGDDDGGKLFTPEEYEEYKKKVLPQRLKNRLYVSWGNPGGMDCKLVGPETPCFCTHRYKQHKTDFEVLPKERPISL 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 1958770886 100 PCRVTGCQCKAYHYVPLNGTQPIRCRCKHFADQHSPALGFTCNA 143
Cdd:pfam14753  81 PCRVKGCRCSSYHYVPRNGSQPVRCRCKHSADEHSEAAPHLCKK 124
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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