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Conserved domains on  [gi|1958775326|ref|XP_038965436|]
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FRAS1-related extracellular matrix protein 1 isoform X1 [Rattus norvegicus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Cadherin_3 pfam16184
Cadherin-like;
402-508 1.45e-34

Cadherin-like;


:

Pssm-ID: 465048 [Multi-domain]  Cd Length: 111  Bit Score: 128.10  E-value: 1.45e-34
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958775326  402 RSAPITVHISIRTADTNAPRVSWNTGLNLLEGQSRAITWEQFQIVDNDDI-GAVQLVTIGGLQHGRLTVREGKGFL---F 477
Cdd:pfam16184    1 RSVPFTFNITIIPVNDEAPVLTTNTGLRLWEGSSRPITPDLLQAEDPDTPpEDLTYTVVQGPSHGHLALKGAPGLPvtnF 80

                           90       100       110
                   ....*....|....*....|....*....|.
gi 1958775326  478 TVADLQAGVVRYHHDDSDTTKDFVAFRIFDG 508
Cdd:pfam16184   81 TQADIDSGLVVYVHDGSESTSDGFTFQVTDG 111
Frem_N super family cl44740
Frem protein N-terminal domain; This entry represents a presumed domain found at the ...
 35-267 2.21e-28

Frem protein N-terminal domain; This entry represents a presumed domain found at the N-terminus of Frem related proteins.


The actual alignment was detected with superfamily member pfam19309:

Pssm-ID: 466034  Cd Length: 202  Bit Score: 113.58  E-value: 2.21e-28
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958775326   35 NRGLRVMKGSSAFLsgDHLR-FAIPKEK-DACRVEVVMNEPITQRVGKLIPQVFDCHFLPNEVQYVHNGCPILDEDSVKL 112
Cdd:pfam19309    5 NRGLRVPFGRSVWL--DPLRdLVIQVQPgDRCEVTVLDNDPLPQRPGALSPRRFPCDFGPREVQYTHFGSRSPSRDRVRL 82

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958775326  113 RLYRFTETETFMETFLLRVSLVEPDCNIirLSSNV-LEVTEFYGLSQAIDKNLLQFDYDRTASLdCTIRVDPVKTQLPAH 191
Cdd:pfam19309   83 QLRYDAPTDTLVLPFTLEVEVVFSQLEI--VTRNLpLTVEKLLGTSNPIDRRVLEFAYDPGTER-CKVTVLPGAGGLPRY 159

                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1958775326  192 GKLVvvnrksegprgDQPHsffsesqlgaerkcpdgsctlepkqvTSLKVSCEDFLLTGFHYQHMQPP-SPNIDYIP 267
Cdd:pfam19309  160 GRLV-----------NATG--------------------------APLMVDCEAFLRAGVRYQHTATTsSPNRDYVP 199
Cadherin_3 pfam16184
Cadherin-like;
510-622 1.05e-24

Cadherin-like;


:

Pssm-ID: 465048 [Multi-domain]  Cd Length: 111  Bit Score: 99.98  E-value: 1.05e-24
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958775326  510 HSSHHKFPINILPKDDSPPFLITNVVIELEEGKTILIQGSMLRASDMDSSDDYIFFNITKFPQAGEIMKKPGPrliGYPV 589
Cdd:pfam16184    1 RSVPFTFNITIIPVNDEAPVLTTNTGLRLWEGSSRPITPDLLQAEDPDTPPEDLTYTVVQGPSHGHLALKGAP---GLPV 77

                           90       100       110
                   ....*....|....*....|....*....|...
gi 1958775326  590 SGFLQRDLFSGIIYYRHFGGEIFEDSFEFVLWD 622
Cdd:pfam16184   78 TNFTQADIDSGLVVYVHDGSESTSDGFTFQVTD 110
Cadherin_3 pfam16184
Cadherin-like;
772-875 3.13e-22

Cadherin-like;


:

Pssm-ID: 465048 [Multi-domain]  Cd Length: 111  Bit Score: 92.67  E-value: 3.13e-22
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958775326  772 FNITVLPVDNQVPEVFTNT-LRVAEGGQCTISTEHILVSDVDTPLDSICLSLQEMPLHGGVELDGFPLNPRGTFSWRDLH 850
Cdd:pfam16184    7 FNITIIPVNDEAPVLTTNTgLRLWEGSSRPITPDLLQAEDPDTPPEDLTYTVVQGPSHGHLALKGAPGLPVTNFTQADID 86

                           90       100
                   ....*....|....*....|....*
gi 1958775326  851 TLKVRYQHDGSEVLQDEIFLEVTDG 875
Cdd:pfam16184   87 SGLVVYVHDGSESTSDGFTFQVTDG 111
Cadherin_3 pfam16184
Cadherin-like;
1019-1134 3.45e-22

Cadherin-like;


:

Pssm-ID: 465048 [Multi-domain]  Cd Length: 111  Bit Score: 92.67  E-value: 3.45e-22
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958775326 1019 LNITVHPVDNQPPSIIIGRTLTVDEGFSAALTTHHLTATDWDTAPDDLEFILVSHPQFGYLENtlpsagfeKRNTGISIA 1098
Cdd:pfam16184    7 FNITIIPVNDEAPVLTTNTGLRLWEGSSRPITPDLLQAEDPDTPPEDLTYTVVQGPSHGHLAL--------KGAPGLPVT 78

                           90       100       110
                   ....*....|....*....|....*....|....*.
gi 1958775326 1099 SFQWRDMKASHINYVqsrHLREEPTADEFLVYATDG 1134
Cdd:pfam16184   79 NFTQADIDSGLVVYV---HDGSESTSDGFTFQVTDG 111
Cadherin_3 pfam16184
Cadherin-like;
1137-1250 1.01e-21

Cadherin-like;


:

Pssm-ID: 465048 [Multi-domain]  Cd Length: 111  Bit Score: 91.51  E-value: 1.01e-21
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958775326 1137 RSLETTFHVIINPTNDEAPDfVVQN--ITVYEGHMVELDSAIISATDRDVPKDPLLFNITHKPKHG-LLLISATSKdahn 1213
Cdd:pfam16184    1 RSVPFTFNITIIPVNDEAPV-LTTNtgLRLWEGSSRPITPDLLQAEDPDTPPEDLTYTVVQGPSHGhLALKGAPGL---- 75

                           90       100       110
                   ....*....|....*....|....*....|....*..
gi 1958775326 1214 EIHNFSMELLQNGmKLAYAHDDSESSADNFVIQLSDG 1250
Cdd:pfam16184   76 PVTNFTQADIDSG-LVVYVHDGSESTSDGFTFQVTDG 111
Cadherin_3 pfam16184
Cadherin-like;
877-990 3.80e-20

Cadherin-like;


:

Pssm-ID: 465048 [Multi-domain]  Cd Length: 111  Bit Score: 86.89  E-value: 3.80e-20
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958775326  877 NSAGFVLYIEVFPVNDEPPVLKADLIpmMHCSEGGEVTITPEYIFATDADSNDSELLFLITREPRHG---VVRKAGLRVD 953
Cdd:pfam16184    1 RSVPFTFNITIIPVNDEAPVLTTNTG--LRLWEGSSRPITPDLLQAEDPDTPPEDLTYTVVQGPSHGhlaLKGAPGLPVT 78

                           90       100       110
                   ....*....|....*....|....*....|....*..
gi 1958775326  954 RFSQGDVISGAVAYKHTGGEiGLESCFdtvVLVVSDG 990
Cdd:pfam16184   79 NFTQADIDSGLVVYVHDGSE-STSDGF---TFQVTDG 111
Cadherin_3 super family cl28802
Cadherin-like;
630-761 2.37e-10

Cadherin-like;


The actual alignment was detected with superfamily member pfam16184:

Pssm-ID: 465048 [Multi-domain]  Cd Length: 111  Bit Score: 58.77  E-value: 2.37e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958775326  630 SVPQVVMVHITPVDDqlpkEAPGISRH--LIVKETEVAYITKKHLHFLDTESHGGELVYTITRPPcfssshrhlDAGKLF 707
Cdd:pfam16184    2 SVPFTFNITIIPVND----EAPVLTTNtgLRLWEGSSRPITPDLLQAEDPDTPPEDLTYTVVQGP---------SHGHLA 68

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1958775326  708 MVDSIPKPTKNptapglnsFTQHAVNHMKVAYmppmQDIGPTPRHVQFTVSVSN 761
Cdd:pfam16184   69 LKGAPGLPVTN--------FTQADIDSGLVVY----VHDGSESTSDGFTFQVTD 110
Cadherin_3 super family cl28802
Cadherin-like;
319-377 1.30e-06

Cadherin-like;


The actual alignment was detected with superfamily member pfam16184:

Pssm-ID: 465048 [Multi-domain]  Cd Length: 111  Bit Score: 48.37  E-value: 1.30e-06
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 1958775326  319 TPLTTSVLDCEEDETPKPLLVFNITEAPLQGYVTHLLDHTRPISSFTWKDLSDMQVAYQ 377
Cdd:pfam16184   35 RPITPDLLQAEDPDTPPEDLTYTVVQGPSHGHLALKGAPGLPVTNFTQADIDSGLVVYV 93
 
Name Accession Description Interval E-value
Cadherin_3 pfam16184
Cadherin-like;
402-508 1.45e-34

Cadherin-like;


Pssm-ID: 465048 [Multi-domain]  Cd Length: 111  Bit Score: 128.10  E-value: 1.45e-34
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958775326  402 RSAPITVHISIRTADTNAPRVSWNTGLNLLEGQSRAITWEQFQIVDNDDI-GAVQLVTIGGLQHGRLTVREGKGFL---F 477
Cdd:pfam16184    1 RSVPFTFNITIIPVNDEAPVLTTNTGLRLWEGSSRPITPDLLQAEDPDTPpEDLTYTVVQGPSHGHLALKGAPGLPvtnF 80

                           90       100       110
                   ....*....|....*....|....*....|.
gi 1958775326  478 TVADLQAGVVRYHHDDSDTTKDFVAFRIFDG 508
Cdd:pfam16184   81 TQADIDSGLVVYVHDGSESTSDGFTFQVTDG 111
Frem_N pfam19309
Frem protein N-terminal domain; This entry represents a presumed domain found at the ...
 35-267 2.21e-28

Frem protein N-terminal domain; This entry represents a presumed domain found at the N-terminus of Frem related proteins.


Pssm-ID: 466034  Cd Length: 202  Bit Score: 113.58  E-value: 2.21e-28
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958775326   35 NRGLRVMKGSSAFLsgDHLR-FAIPKEK-DACRVEVVMNEPITQRVGKLIPQVFDCHFLPNEVQYVHNGCPILDEDSVKL 112
Cdd:pfam19309    5 NRGLRVPFGRSVWL--DPLRdLVIQVQPgDRCEVTVLDNDPLPQRPGALSPRRFPCDFGPREVQYTHFGSRSPSRDRVRL 82

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958775326  113 RLYRFTETETFMETFLLRVSLVEPDCNIirLSSNV-LEVTEFYGLSQAIDKNLLQFDYDRTASLdCTIRVDPVKTQLPAH 191
Cdd:pfam19309   83 QLRYDAPTDTLVLPFTLEVEVVFSQLEI--VTRNLpLTVEKLLGTSNPIDRRVLEFAYDPGTER-CKVTVLPGAGGLPRY 159

                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1958775326  192 GKLVvvnrksegprgDQPHsffsesqlgaerkcpdgsctlepkqvTSLKVSCEDFLLTGFHYQHMQPP-SPNIDYIP 267
Cdd:pfam19309  160 GRLV-----------NATG--------------------------APLMVDCEAFLRAGVRYQHTATTsSPNRDYVP 199
Cadherin_3 pfam16184
Cadherin-like;
510-622 1.05e-24

Cadherin-like;


Pssm-ID: 465048 [Multi-domain]  Cd Length: 111  Bit Score: 99.98  E-value: 1.05e-24
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958775326  510 HSSHHKFPINILPKDDSPPFLITNVVIELEEGKTILIQGSMLRASDMDSSDDYIFFNITKFPQAGEIMKKPGPrliGYPV 589
Cdd:pfam16184    1 RSVPFTFNITIIPVNDEAPVLTTNTGLRLWEGSSRPITPDLLQAEDPDTPPEDLTYTVVQGPSHGHLALKGAP---GLPV 77

                           90       100       110
                   ....*....|....*....|....*....|...
gi 1958775326  590 SGFLQRDLFSGIIYYRHFGGEIFEDSFEFVLWD 622
Cdd:pfam16184   78 TNFTQADIDSGLVVYVHDGSESTSDGFTFQVTD 110
Cadherin_3 pfam16184
Cadherin-like;
772-875 3.13e-22

Cadherin-like;


Pssm-ID: 465048 [Multi-domain]  Cd Length: 111  Bit Score: 92.67  E-value: 3.13e-22
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958775326  772 FNITVLPVDNQVPEVFTNT-LRVAEGGQCTISTEHILVSDVDTPLDSICLSLQEMPLHGGVELDGFPLNPRGTFSWRDLH 850
Cdd:pfam16184    7 FNITIIPVNDEAPVLTTNTgLRLWEGSSRPITPDLLQAEDPDTPPEDLTYTVVQGPSHGHLALKGAPGLPVTNFTQADID 86

                           90       100
                   ....*....|....*....|....*
gi 1958775326  851 TLKVRYQHDGSEVLQDEIFLEVTDG 875
Cdd:pfam16184   87 SGLVVYVHDGSESTSDGFTFQVTDG 111
Cadherin_3 pfam16184
Cadherin-like;
1019-1134 3.45e-22

Cadherin-like;


Pssm-ID: 465048 [Multi-domain]  Cd Length: 111  Bit Score: 92.67  E-value: 3.45e-22
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958775326 1019 LNITVHPVDNQPPSIIIGRTLTVDEGFSAALTTHHLTATDWDTAPDDLEFILVSHPQFGYLENtlpsagfeKRNTGISIA 1098
Cdd:pfam16184    7 FNITIIPVNDEAPVLTTNTGLRLWEGSSRPITPDLLQAEDPDTPPEDLTYTVVQGPSHGHLAL--------KGAPGLPVT 78

                           90       100       110
                   ....*....|....*....|....*....|....*.
gi 1958775326 1099 SFQWRDMKASHINYVqsrHLREEPTADEFLVYATDG 1134
Cdd:pfam16184   79 NFTQADIDSGLVVYV---HDGSESTSDGFTFQVTDG 111
Cadherin_3 pfam16184
Cadherin-like;
1137-1250 1.01e-21

Cadherin-like;


Pssm-ID: 465048 [Multi-domain]  Cd Length: 111  Bit Score: 91.51  E-value: 1.01e-21
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958775326 1137 RSLETTFHVIINPTNDEAPDfVVQN--ITVYEGHMVELDSAIISATDRDVPKDPLLFNITHKPKHG-LLLISATSKdahn 1213
Cdd:pfam16184    1 RSVPFTFNITIIPVNDEAPV-LTTNtgLRLWEGSSRPITPDLLQAEDPDTPPEDLTYTVVQGPSHGhLALKGAPGL---- 75

                           90       100       110
                   ....*....|....*....|....*....|....*..
gi 1958775326 1214 EIHNFSMELLQNGmKLAYAHDDSESSADNFVIQLSDG 1250
Cdd:pfam16184   76 PVTNFTQADIDSG-LVVYVHDGSESTSDGFTFQVTDG 111
Cadherin_3 pfam16184
Cadherin-like;
877-990 3.80e-20

Cadherin-like;


Pssm-ID: 465048 [Multi-domain]  Cd Length: 111  Bit Score: 86.89  E-value: 3.80e-20
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958775326  877 NSAGFVLYIEVFPVNDEPPVLKADLIpmMHCSEGGEVTITPEYIFATDADSNDSELLFLITREPRHG---VVRKAGLRVD 953
Cdd:pfam16184    1 RSVPFTFNITIIPVNDEAPVLTTNTG--LRLWEGSSRPITPDLLQAEDPDTPPEDLTYTVVQGPSHGhlaLKGAPGLPVT 78

                           90       100       110
                   ....*....|....*....|....*....|....*..
gi 1958775326  954 RFSQGDVISGAVAYKHTGGEiGLESCFdtvVLVVSDG 990
Cdd:pfam16184   79 NFTQADIDSGLVVYVHDGSE-STSDGF---TFQVTDG 111
Cadherin_3 pfam16184
Cadherin-like;
630-761 2.37e-10

Cadherin-like;


Pssm-ID: 465048 [Multi-domain]  Cd Length: 111  Bit Score: 58.77  E-value: 2.37e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958775326  630 SVPQVVMVHITPVDDqlpkEAPGISRH--LIVKETEVAYITKKHLHFLDTESHGGELVYTITRPPcfssshrhlDAGKLF 707
Cdd:pfam16184    2 SVPFTFNITIIPVND----EAPVLTTNtgLRLWEGSSRPITPDLLQAEDPDTPPEDLTYTVVQGP---------SHGHLA 68

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1958775326  708 MVDSIPKPTKNptapglnsFTQHAVNHMKVAYmppmQDIGPTPRHVQFTVSVSN 761
Cdd:pfam16184   69 LKGAPGLPVTN--------FTQADIDSGLVVY----VHDGSESTSDGFTFQVTD 110
Cadherin_3 pfam16184
Cadherin-like;
319-377 1.30e-06

Cadherin-like;


Pssm-ID: 465048 [Multi-domain]  Cd Length: 111  Bit Score: 48.37  E-value: 1.30e-06
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 1958775326  319 TPLTTSVLDCEEDETPKPLLVFNITEAPLQGYVTHLLDHTRPISSFTWKDLSDMQVAYQ 377
Cdd:pfam16184   35 RPITPDLLQAEDPDTPPEDLTYTVVQGPSHGHLALKGAPGLPVTNFTQADIDSGLVVYV 93
 
Name Accession Description Interval E-value
Cadherin_3 pfam16184
Cadherin-like;
402-508 1.45e-34

Cadherin-like;


Pssm-ID: 465048 [Multi-domain]  Cd Length: 111  Bit Score: 128.10  E-value: 1.45e-34
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958775326  402 RSAPITVHISIRTADTNAPRVSWNTGLNLLEGQSRAITWEQFQIVDNDDI-GAVQLVTIGGLQHGRLTVREGKGFL---F 477
Cdd:pfam16184    1 RSVPFTFNITIIPVNDEAPVLTTNTGLRLWEGSSRPITPDLLQAEDPDTPpEDLTYTVVQGPSHGHLALKGAPGLPvtnF 80

                           90       100       110
                   ....*....|....*....|....*....|.
gi 1958775326  478 TVADLQAGVVRYHHDDSDTTKDFVAFRIFDG 508
Cdd:pfam16184   81 TQADIDSGLVVYVHDGSESTSDGFTFQVTDG 111
Frem_N pfam19309
Frem protein N-terminal domain; This entry represents a presumed domain found at the ...
 35-267 2.21e-28

Frem protein N-terminal domain; This entry represents a presumed domain found at the N-terminus of Frem related proteins.


Pssm-ID: 466034  Cd Length: 202  Bit Score: 113.58  E-value: 2.21e-28
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958775326   35 NRGLRVMKGSSAFLsgDHLR-FAIPKEK-DACRVEVVMNEPITQRVGKLIPQVFDCHFLPNEVQYVHNGCPILDEDSVKL 112
Cdd:pfam19309    5 NRGLRVPFGRSVWL--DPLRdLVIQVQPgDRCEVTVLDNDPLPQRPGALSPRRFPCDFGPREVQYTHFGSRSPSRDRVRL 82

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958775326  113 RLYRFTETETFMETFLLRVSLVEPDCNIirLSSNV-LEVTEFYGLSQAIDKNLLQFDYDRTASLdCTIRVDPVKTQLPAH 191
Cdd:pfam19309   83 QLRYDAPTDTLVLPFTLEVEVVFSQLEI--VTRNLpLTVEKLLGTSNPIDRRVLEFAYDPGTER-CKVTVLPGAGGLPRY 159

                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1958775326  192 GKLVvvnrksegprgDQPHsffsesqlgaerkcpdgsctlepkqvTSLKVSCEDFLLTGFHYQHMQPP-SPNIDYIP 267
Cdd:pfam19309  160 GRLV-----------NATG--------------------------APLMVDCEAFLRAGVRYQHTATTsSPNRDYVP 199
Cadherin_3 pfam16184
Cadherin-like;
510-622 1.05e-24

Cadherin-like;


Pssm-ID: 465048 [Multi-domain]  Cd Length: 111  Bit Score: 99.98  E-value: 1.05e-24
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958775326  510 HSSHHKFPINILPKDDSPPFLITNVVIELEEGKTILIQGSMLRASDMDSSDDYIFFNITKFPQAGEIMKKPGPrliGYPV 589
Cdd:pfam16184    1 RSVPFTFNITIIPVNDEAPVLTTNTGLRLWEGSSRPITPDLLQAEDPDTPPEDLTYTVVQGPSHGHLALKGAP---GLPV 77

                           90       100       110
                   ....*....|....*....|....*....|...
gi 1958775326  590 SGFLQRDLFSGIIYYRHFGGEIFEDSFEFVLWD 622
Cdd:pfam16184   78 TNFTQADIDSGLVVYVHDGSESTSDGFTFQVTD 110
Cadherin_3 pfam16184
Cadherin-like;
772-875 3.13e-22

Cadherin-like;


Pssm-ID: 465048 [Multi-domain]  Cd Length: 111  Bit Score: 92.67  E-value: 3.13e-22
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958775326  772 FNITVLPVDNQVPEVFTNT-LRVAEGGQCTISTEHILVSDVDTPLDSICLSLQEMPLHGGVELDGFPLNPRGTFSWRDLH 850
Cdd:pfam16184    7 FNITIIPVNDEAPVLTTNTgLRLWEGSSRPITPDLLQAEDPDTPPEDLTYTVVQGPSHGHLALKGAPGLPVTNFTQADID 86

                           90       100
                   ....*....|....*....|....*
gi 1958775326  851 TLKVRYQHDGSEVLQDEIFLEVTDG 875
Cdd:pfam16184   87 SGLVVYVHDGSESTSDGFTFQVTDG 111
Cadherin_3 pfam16184
Cadherin-like;
1019-1134 3.45e-22

Cadherin-like;


Pssm-ID: 465048 [Multi-domain]  Cd Length: 111  Bit Score: 92.67  E-value: 3.45e-22
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958775326 1019 LNITVHPVDNQPPSIIIGRTLTVDEGFSAALTTHHLTATDWDTAPDDLEFILVSHPQFGYLENtlpsagfeKRNTGISIA 1098
Cdd:pfam16184    7 FNITIIPVNDEAPVLTTNTGLRLWEGSSRPITPDLLQAEDPDTPPEDLTYTVVQGPSHGHLAL--------KGAPGLPVT 78

                           90       100       110
                   ....*....|....*....|....*....|....*.
gi 1958775326 1099 SFQWRDMKASHINYVqsrHLREEPTADEFLVYATDG 1134
Cdd:pfam16184   79 NFTQADIDSGLVVYV---HDGSESTSDGFTFQVTDG 111
Cadherin_3 pfam16184
Cadherin-like;
1137-1250 1.01e-21

Cadherin-like;


Pssm-ID: 465048 [Multi-domain]  Cd Length: 111  Bit Score: 91.51  E-value: 1.01e-21
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958775326 1137 RSLETTFHVIINPTNDEAPDfVVQN--ITVYEGHMVELDSAIISATDRDVPKDPLLFNITHKPKHG-LLLISATSKdahn 1213
Cdd:pfam16184    1 RSVPFTFNITIIPVNDEAPV-LTTNtgLRLWEGSSRPITPDLLQAEDPDTPPEDLTYTVVQGPSHGhLALKGAPGL---- 75

                           90       100       110
                   ....*....|....*....|....*....|....*..
gi 1958775326 1214 EIHNFSMELLQNGmKLAYAHDDSESSADNFVIQLSDG 1250
Cdd:pfam16184   76 PVTNFTQADIDSG-LVVYVHDGSESTSDGFTFQVTDG 111
Cadherin_3 pfam16184
Cadherin-like;
877-990 3.80e-20

Cadherin-like;


Pssm-ID: 465048 [Multi-domain]  Cd Length: 111  Bit Score: 86.89  E-value: 3.80e-20
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958775326  877 NSAGFVLYIEVFPVNDEPPVLKADLIpmMHCSEGGEVTITPEYIFATDADSNDSELLFLITREPRHG---VVRKAGLRVD 953
Cdd:pfam16184    1 RSVPFTFNITIIPVNDEAPVLTTNTG--LRLWEGSSRPITPDLLQAEDPDTPPEDLTYTVVQGPSHGhlaLKGAPGLPVT 78

                           90       100       110
                   ....*....|....*....|....*....|....*..
gi 1958775326  954 RFSQGDVISGAVAYKHTGGEiGLESCFdtvVLVVSDG 990
Cdd:pfam16184   79 NFTQADIDSGLVVYVHDGSE-STSDGF---TFQVTDG 111
Cadherin_3 pfam16184
Cadherin-like;
630-761 2.37e-10

Cadherin-like;


Pssm-ID: 465048 [Multi-domain]  Cd Length: 111  Bit Score: 58.77  E-value: 2.37e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958775326  630 SVPQVVMVHITPVDDqlpkEAPGISRH--LIVKETEVAYITKKHLHFLDTESHGGELVYTITRPPcfssshrhlDAGKLF 707
Cdd:pfam16184    2 SVPFTFNITIIPVND----EAPVLTTNtgLRLWEGSSRPITPDLLQAEDPDTPPEDLTYTVVQGP---------SHGHLA 68

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1958775326  708 MVDSIPKPTKNptapglnsFTQHAVNHMKVAYmppmQDIGPTPRHVQFTVSVSN 761
Cdd:pfam16184   69 LKGAPGLPVTN--------FTQADIDSGLVVY----VHDGSESTSDGFTFQVTD 110
Cadherin_3 pfam16184
Cadherin-like;
319-377 1.30e-06

Cadherin-like;


Pssm-ID: 465048 [Multi-domain]  Cd Length: 111  Bit Score: 48.37  E-value: 1.30e-06
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 1958775326  319 TPLTTSVLDCEEDETPKPLLVFNITEAPLQGYVTHLLDHTRPISSFTWKDLSDMQVAYQ 377
Cdd:pfam16184   35 RPITPDLLQAEDPDTPPEDLTYTVVQGPSHGHLALKGAPGLPVTNFTQADIDSGLVVYV 93
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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