Fungi (ID 482816) - BioProject

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Accession: PRJNA482816 ID: 482816

Fungi

Fungi Microbial Survey

Genome sequence database of fungi found in foods for strain characterization and identification

Accession	PRJNA482816
Data Type	Genome sequencing and assembly
Scope	Multispecies
Publications	Gebru ST et al., "Draft Genome Sequences of 20 Aspergillus flavus Isolates from Corn Kernels and Cornfield Soils in Louisiana.", Microbiol Resour Announc, 2020 Sep 17;9(38) Gebru ST et al., "Draft Genome Sequences of Alternaria Strains Isolated from Grapes and Apples.", Microbiol Resour Announc, 2020 Apr 2;9(14)
Submission	Registration date: 25-Jul-2018 USFDA
Relevance	Public Health

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	36
SRA Experiments	41
Publications
PubMed	2
PMC	2
Other datasets
BioSample	41
Assembly	36

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

36
36

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_004634295.1	SJDQ00000000	SAMN10078277	MOD1-FUNGI5	Alternaria alternata
GCA_004634205.1	SJDP00000000	SAMN10078278	MOD1-FUNGI6	Alternaria arborescens
GCA_004634305.1	SJDO00000000	SAMN10078279	MOD1-FUNGI7	Alternaria atra
GCA_013436455.1	JABVYW000000000	SAMN14613758	07-M-C-3-1-7	Aspergillus flavus
GCA_013436445.1	JABVYX000000000	SAMN14613759	07-S-1-1-7	Aspergillus flavus
GCA_013436355.1	JABVYZ000000000	SAMN14613761	07-S-2-1-2	Aspergillus flavus
GCA_013436375.1	JABVYY000000000	SAMN14613760	07-S-2-1-1	Aspergillus flavus
GCA_013436335.1	JABVZA000000000	SAMN14613762	07-S-2-5-7	Aspergillus flavus
GCA_013436315.1	JABVZB000000000	SAMN14613763	07-S-3-1-1	Aspergillus flavus
GCA_013436325.1	JABVZC000000000	SAMN14613764	07-S-3-1-8	Aspergillus flavus
GCA_013436235.1	JABVZD000000000	SAMN14613765	07-S-3-2-4	Aspergillus flavus
GCA_013436215.1	JABVZE000000000	SAMN14613766	07-S-4-4-1	Aspergillus flavus
GCA_013436195.1	JABVZF000000000	SAMN14613767	07-S-6-4-1	Aspergillus flavus
GCA_013436165.1	JABVZG000000000	SAMN14613768	07-S-6-5-4	Aspergillus flavus
GCA_013436085.1	JABVZK000000000	SAMN14613772	07-C-7-6-4	Aspergillus flavus
GCA_013436105.1	JABVZI000000000	SAMN14613770	07-C-1-1-4	Aspergillus flavus
GCA_013436095.1	JABVZJ000000000	SAMN14613771	07-M-S-3-3-2	Aspergillus flavus
GCA_013436115.1	JABVZH000000000	SAMN14613769	07-M-S-3-6-1	Aspergillus flavus
GCA_013435925.1	JABVYR000000000	SAMN14613753	07-C-1-1-1	Aspergillus flavus
GCA_013435855.1	JABVYS000000000	SAMN14613754	07-C-3-2-5	Aspergillus flavus
GCA_013435835.1	JABVYU000000000	SAMN14613756	07-C-5-1-5	Aspergillus flavus
GCA_013435825.1	JABVYT000000000	SAMN14613755	07-C-3-5-5	Aspergillus flavus
GCA_013435725.1	JABVYV000000000	SAMN14613757	07-C-7-10-3	Aspergillus flavus
GCA_004634315.1	SJDR00000000	SAMN10078274	MOD1-FUNGI2	Aspergillus niger
GCA_003709435.1	RBJE00000000	SAMN10078289	MOD1-FUNGI17	Fusarium incarnatum
GCA_003704985.1	RBBZ00000000	SAMN10078290	MOD1-FUNGI18	Fusarium incarnatum
GCA_003705045.1	RBCF00000000	SAMN10078283	MOD1-FUNGI11	Fusarium oxysporum
GCA_003704975.1	RBCG00000000	SAMN10078281	MOD1-FUNGI9	Fusarium oxysporum
GCA_003705035.1	RBCA00000000	SAMN10078288	MOD1-FUNGI16	Fusarium oxysporum
GCA_003709395.1	RBJF00000000	SAMN10078282	MOD1-FUNGI10	Fusarium oxysporum
GCA_003709405.1	RBJG00000000	SAMN10078280	MOD1-FUNGI8	Fusarium proliferatum
GCA_003704965.1	RBCE00000000	SAMN10078284	MOD1-FUNGI12	Fusarium proliferatum
GCA_003704895.1	RBCC00000000	SAMN10078286	MOD1-FUNGI14	Fusarium proliferatum
GCA_003704885.1	RBCB00000000	SAMN10078287	MOD1-FUNGI15	Fusarium proliferatum
GCA_003704875.1	RBBY00000000	SAMN10078291	MOD1-FUNGI19	Fusarium proliferatum
GCA_003705095.1	RBCD00000000	SAMN10078285	MOD1-FUNGI13	Fusarium proliferatum

SRA Data Details

Parameter	Value
Data volume, Gbases	198
Data volume, Mbytes	90039

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