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Links from Nucleotide

Accession: PRJNA734455 ID: 734455

Astyanax mexicanus (Mexican tetra)

Pachon cavefish Astyanax mexicanus genome sequencing and assembly

See Genome Information for Astyanax mexicanus
A chromosome scale genome sequencing and assembly of Pachon cavefish Astyanax mexicanus
AccessionPRJNA734455
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismAstyanax mexicanus[Taxonomy ID: 7994]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Astyanax; Astyanax mexicanus
Publications
  • Published online: Imarazene B et al., "A supernumerary “B-sex” chromosome drives male sex determination in the Pachón cavefish, Astyanax mexicanus", Current Biology, 2021;
Grants
  • "Evolution of genes and genomes after whole genome duplication â?? GenoFish" (Grant ID ANR-16-CE12-0035, Agence Nationale de la recherche)
  • "Investissement d'avenir" (Grant ID ANR-10-INBS-09, Agence Nationale de la recherche)
SubmissionRegistration date: 23-Aug-2021
GenoFish
- INRAE (Fish Physiology and Genomics laboratory)
RelevanceEvolution
Locus Tag PrefixAMEX
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)104
WGS master1
SRA Experiments9
Protein Sequences24625
Other datasets
BioSample4
Assembly1
SRA Data Details
ParameterValue
Data volume, Gbases549
Data volume, Tbytes0.27

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