Conserved Protein Domain Family
VKOR_euk

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cd12917: VKOR_euk 
Vitamin K epoxide reductase family in eukaryotes, excluding plants
This family includes vitamin K epoxide reductase (VKOR) present in bacteria and plant. VKOR (also named VKORC1) is an integral membrane protein that catalyzes the reduction of vitamin K 2,3-epoxide and vitamin K to vitamin K hydroquinone, an essential co-factor subsequently used in the gamma-carboxylation of glutamic acid residues in blood coagulation enzymes. All homologs of VKOR contain an active site CXXC motif, which is switched between reduced and disulfide-bonded states during the reaction cycle. Warfarin, a widely used oral anticoagulant used in medicine as well as rodenticides, inhibits the activity of VKOR, resulting in decreased levels of reduced vitamin K, which is required for the function of several clotting factors. However, anticoagulation effect of warfarin is significantly associated with polymorphism of certain genes, including VKORC1. Interestingly, in rodents, an adaptive trait appears to have evolved convergently by selection on new or standing genetic polymorphisms in VKORC1 as well as by adaptive introgressive hybridization between species, likely brought about by human-mediated dispersal.
Statistics
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PSSM-Id: 240600
Aligned: 49 rows
Threshold Bit Score: 99.9846
Created: 22-Jul-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative activeredox center
Feature 1:putative active site [active site]
Evidence:
  • Comment:four cysteines and one serine or threonine are inferred to be the active center

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                          #              #     #                     
Q7ZYK9     32 PVRLLLCSVGIALSLYAFHVETSrer----dpdYTALCDInp-------siSCSKVFTSRWGRGFGlveqflgqqsllNQ 100 African clawed frog
EGD83579    3 LLVILTALAGVGVCAFALYVEHEatt----hedYKAPCDIse-------hmSCTRVFTSQWGRGYGiiapllgedsplNM 71  Salpingoeca sp. AT...
EEE31645    6 RSVVVTAALGVALCMYAIHVEHSasl----dasYRAVCDFsa-------saSCSKVLTSPQSRLLKyfgvaa-pgshfDF 73  Toxoplasma gondii VEG
CBN75221    3 TSLQAMGAIGLCLSLYAVYVEHKnee----dssYEAMCDVse-------rmSCSKVLMSEWGHILSqlgvlp-kghqfDL 70  Ectocarpus silicul...
CCA15132    7 RPIQLWGALGALVAAYGNYVEYQkhr----naaYQAVCDSst--------ySCSRVLSSTSSHLVShlglvd-snsllDI 73  Albugo laibachii Nc14
EDQ84814   91 LVVVALSALGLALCVYTLHVARSarrs---pgkYRAWCDVss-------avSCSRAFTSPYAVGFGllepllgrdsplNL 160 Monosiga brevicoll...
EEB00514    8 SAVALLALCGLMVSLYCVHVQQHler----hlaYKPYCDIap-------smMCSKVALSPYSHMLSlfglae-phgrmDV 75  Toxoplasma gondii ...
CBY21061    2 LLKICLSLAGIGLMYYEKVVDENmaaaalakqeYKASCDMkvdfgfieqefSCSTILNSDYAVGFGflqnvlpvdspfIQ 81  Oikopleura dioica
EGZ29847    8 VRLSVLGALGVAVSAYGVHVKTQkmal---rdeYAPLCDSea--------fSCSEVLTSEYSSLLShlglve-khsvlDV 75  Phytophthora sojae
CBY20505    5 LVRVLVCLLGVGISYYAFDVDQKiae----npdHEATCDFpsles-ssfkvSCTTAFNSEYGKGFGficsiagedsplCQ 79  Oikopleura dioica
Feature 1                                                                  #  #              
Q7ZYK9    101 PNSVFGVLFYGLQLLlgfsgs--------laaastLLGTSLMSIGGSMYLAYILvyVLRDFCVICVSTYVLNLLLLLLN 171 African clawed frog
EGD83579   72 PNPYYGILFYVALLVkelvlpr------srvldlmCFAATLVAVGMCAYLAYILafVLEDFCAVCVSSYVINAALLFLL 144 Salpingoeca sp. ATC...
EEE31645   74 PNTYLGLVFYASMLTfplgrh---------scpsfYTLSAAASMATSIYLAYVLyaVLEDFCVVCVSSYVLNLILFGAA 143 Toxoplasma gondii VEG
CBN75221   71 ANATLGVLYFAAVFLhrlfplss-----cqakakvVFALTVPVVGVSLYLMYILlvVLQDICLICVSIYGVNLAVLVLS 144 Ectocarpus siliculosus
CCA15132   74 SNSALGLMYYTLCIIapytgsi-------rlshevYLISSILAEVLSAYLAYILvfQLQEFCMVCVSSYVVNSALLWLF 145 Albugo laibachii Nc14
EDQ84814  161 SNAYFGLPYYILMLMdglcgidaqpgtwanivhqlALPASLLATGASLYLAWVLaaRLHVTCIVCVASYSVNLALAVLA 239 Monosiga brevicolli...
EEB00514   76 ANGHLGVAFYAFMLTypfgkq---------afeniYFLGTTTALVVSGYLCYLVysALSVVSIISASIVIVNALLFITI 145 Toxoplasma gondii ME49
CBY21061   82 PNYVYGLWHYILQLFmtlin-----------dgqlSRTLSIGGIGASIYFTYAMi-KLEALCIACVLCHFINVAFFVVD 148 Oikopleura dioica
EGZ29847   76 SNAHLGVLAYSLFVLypvlrkv-------pyhaqfYLAVSSCGAVVMVYLAYILafVLRDFCLVCVATYGITAALLWTS 147 Phytophthora sojae
CBY20505   80 KNSLYGIVSYALMIPlvlmqn--------vfaaevLLIISLGSIVISIFLAYVLv-LLKTVCLVCIGTYVINIVILKHN 149 Oikopleura dioica

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