ClinVar Genomic variation as it relates to human health
NC_012920.1(MT-TK):m.8344A>G
No data submitted for somatic clinical impact
No data submitted for oncogenicity
Variant Details
- Identifiers
-
NC_012920.1(MT-TK):m.8344A>G
Variation ID: 9579 Accession: VCV000009579.32
- Type and length
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single nucleotide variant, 1 bp
- Location
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MT: 8344 (GRCh38) [ NCBI UCSC ] MT: 8344 (GRCh37) [ NCBI UCSC ]
- Timeline in ClinVar
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First in ClinVar Help The date this variant first appeared in ClinVar with each type of classification.
Last submission Help The date of the most recent submission for each type of classification for this variant.
Last evaluated Help The most recent date that a submitter evaluated this variant for each type of classification.
Germline Mar 24, 2015 Oct 26, 2024 Nov 3, 2021 - HGVS
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Nucleotide Protein Molecular
consequenceNC_012920.1:m.8344A>G - Protein change
- -
- Other names
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A8344G
MTTK*MERRF8334
8344A-G
- Canonical SPDI
- NC_012920.1:8343:A:G
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Functional
consequence HelpThe effect of the variant on RNA or protein function, based on experimental evidence from submitters.
- -
-
Global minor allele
frequency (GMAF) HelpThe global minor allele frequency calculated by the 1000 Genomes Project. The minor allele at this location is indicated in parentheses and may be different from the allele represented by this VCV record.
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Allele frequency
Help
The frequency of the allele represented by this VCV record.
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- Links
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ClinGen: CA254836 Genetic Testing Registry (GTR): GTR000500598 Genetic Testing Registry (GTR): GTR000556568 Genetic Testing Registry (GTR): GTR000591967 Genetic Testing Registry (GTR): GTR000591969 Genetic Testing Registry (GTR): GTR000591975 Genetic Testing Registry (GTR): GTR000591976 OMIM: 590060.0001 dbSNP: rs118192098 VarSome
Genes
Gene | OMIM | ClinGen Gene Dosage Sensitivity Curation |
Variation Viewer
Help
Links to Variation Viewer, a genome browser to view variation data from NCBI databases. |
Related variants | ||
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HI score
Help
The haploinsufficiency score for the gene, curated by ClinGen’s Dosage Sensitivity Curation task team. |
TS score
Help
The triplosensitivity score for the gene, curated by ClinGen’s Dosage Sensitivity Curation task team. |
Within gene
Help
The number of variants in ClinVar that are contained within this gene, with a link to view the list of variants. |
All
Help
The number of variants in ClinVar for this gene, including smaller variants within the gene and larger CNVs that overlap or fully contain the gene. |
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MT-TK | - | - | GRCh38 | 37 | 47 |
Conditions - Germline
Condition
Help
The condition for this variant-condition (RCV) record in ClinVar. |
Classification
Help
The aggregate germline classification for this variant-condition (RCV) record in ClinVar. The number of submissions that contribute to this aggregate classification is shown in parentheses. (# of submissions) |
Review status
Help
The aggregate review status for this variant-condition (RCV) record in ClinVar. This value is calculated by NCBI based on data from submitters. Read our rules for calculating the review status. |
Last evaluated
Help
The most recent date that a submitter evaluated this variant for the condition. |
Variation/condition record
Help
The RCV accession number, with most recent version number, for the variant-condition record, with a link to the RCV web page. |
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Pathogenic (5) |
criteria provided, multiple submitters, no conflicts
|
Apr 16, 2024 | RCV000010192.17 | |
Pathogenic (1) |
no assertion criteria provided
|
Oct 1, 2010 | RCV000010194.9 | |
Pathogenic (2) |
no assertion criteria provided
|
Oct 1, 2010 | RCV000010193.13 | |
Pathogenic (3) |
criteria provided, multiple submitters, no conflicts
|
Dec 1, 2019 | RCV000224965.12 | |
Pathogenic (2) |
criteria provided, multiple submitters, no conflicts
|
May 4, 2022 | RCV000850950.2 | |
Pathogenic (2) |
reviewed by expert panel
|
Nov 3, 2021 | RCV000495310.2 | |
MT-TK-related mitochondrial disorder
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Pathogenic (1) |
criteria provided, single submitter
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Jul 20, 2021 | RCV001729345.1 |
MT-TK-related disorder
|
Pathogenic (1) |
no assertion criteria provided
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Mar 9, 2023 | RCV003492290.1 |
Likely pathogenic (1) |
no assertion criteria provided
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Jun 1, 2022 | RCV004766996.1 |
Submissions - Germline
Classification
Help
The submitted germline classification for each SCV record. (Last evaluated) |
Review status
Help
Stars represent the review status, or the level of review supporting the submitted (SCV) record. This value is calculated by NCBI based on data from the submitter. Read our rules for calculating the review status. This column also includes a link to the submitter’s assertion criteria if provided, and the collection method. (Assertion criteria) |
Condition
Help
The condition for the classification, provided by the submitter for this submitted (SCV) record. This column also includes the affected status and allele origin of individuals observed with this variant. |
Submitter
Help
The submitting organization for this submitted (SCV) record. This column also includes the SCV accession and version number, the date this SCV first appeared in ClinVar, and the date that this SCV was last updated in ClinVar. |
More information
Help
This column includes more information supporting the classification, including citations, the comment on classification, and detailed evidence provided as observations of the variant by the submitter. |
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Pathogenic
(Nov 03, 2021)
|
reviewed by expert panel
Method: curation
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Mitochondrial disease
(Mitochondrial inheritance)
Affected status: unknown
Allele origin:
germline
|
ClinGen Mitochondrial Disease Nuclear and Mitochondrial Variant Curation Expert Panel, ClinGen
FDA Recognized Database
Accession: SCV002037594.1 First in ClinVar: Dec 23, 2021 Last updated: Dec 23, 2021 |
Comment:
The m.8344A>G variant in MT-TK was reviewed by the Mitochondrial Disease Nuclear and Mitochondrial Variant Curation Expert Panel as part of the variant pilot for … (more)
The m.8344A>G variant in MT-TK was reviewed by the Mitochondrial Disease Nuclear and Mitochondrial Variant Curation Expert Panel as part of the variant pilot for mitochondrial DNA variant specifications (McCormick et al., 2020; PMID: 32906214). This variant has been reported in >16 individuals with primary mitochondrial disease with variable features. While this variant is classically associated with the mitochondrial disease clinical syndrome MERRF (myoclonic epilepsy with ragged red fibers), affected individuals can have any number of features including but not limited to ataxia, myoclonus, seizures, Leigh syndrome, muscle weakness, exercise intolerance, sensorineural hearing loss, neuropathy, and lipomas, with onset ranging from childhood to adulthood (PS4; PMIDs: 2112427, 1910259, 23635963). This variant heteroplasmy level segregated with severity in >10 family members from >10 families (PP1_moderate; PMIDs: 2112427, 23635963). The computational predictor MitoTIP suggests this variant impacts the function of this tRNA, as does HmtVar with a score of 0.90 (PP3). Cybrid studies supported the functional impact of this variant including a deficiency seen in patient cell line that was transferred to cybrids with a high mutant load and study was reproducible (PS3_supporting; PMIDs: 1848674, 7739567). In summary, this variant meets criteria to be classified as pathogenic for primary mitochondrial disease inherited in a mitochondrial manner. This classification was approved by the NICHD U24 ClinGen Mitochondrial Disease Variant Curation Expert Panel as of August 20, 2020. Mitochondrial DNA-specific ACMG/AMP criteria applied: PS4, PS3_supporting, PP1_moderate, PP3. (less)
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Pathogenic
(Aug 26, 2014)
|
criteria provided, single submitter
Method: clinical testing
|
not provided
Affected status: not provided
Allele origin:
germline
|
Center for Pediatric Genomic Medicine, Children's Mercy Hospital and Clinics
Accession: SCV000281618.1
First in ClinVar: Jun 08, 2016 Last updated: Jun 08, 2016 |
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Pathogenic
(Jul 09, 2020)
|
criteria provided, single submitter
Method: clinical testing
|
MERRF syndrome
(Mitochondrial inheritance)
Affected status: yes
Allele origin:
maternal
|
Undiagnosed Diseases Network, NIH
Study: Undiagnosed Diseases Network (NIH), UDN
Accession: SCV001432759.1 First in ClinVar: Sep 19, 2020 Last updated: Sep 19, 2020 |
Comment:
This is a known pathogenic variant that accounts for about 80% of individuals with MERRF.
Number of individuals with the variant: 1
Clinical Features:
Testicular torsion (present) , Specific learning disability (present) , Short stature (present) , Pes cavus (present) , Optic atrophy (present) , Lipoma (present) , Hypothyroidism … (more)
Testicular torsion (present) , Specific learning disability (present) , Short stature (present) , Pes cavus (present) , Optic atrophy (present) , Lipoma (present) , Hypothyroidism (present) , Hyperlipidemia (present) , Hepatic steatosis (present) , Hand tremor (present) , Generalized tonic-clonic seizures (present) , Gait disturbance (present) , Focal seizures (present) , Elevated serum alanine aminotransferase (present) , Dystonia (present) , Dysarthria (present) , Delayed gross motor development (present) , Celiac disease (present) (less)
Zygosity: Single Heterozygote
Age: 30-39 years
Sex: male
Ethnicity/Population group: Hispanic Americans
Tissue: blood
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Pathogenic
(May 31, 2022)
|
criteria provided, single submitter
Method: clinical testing
|
MERRF syndrome
Affected status: yes
Allele origin:
germline
|
MGZ Medical Genetics Center
Accession: SCV002579956.1
First in ClinVar: Oct 15, 2022 Last updated: Oct 15, 2022
Comment:
ACMG criteria applied: PS4, PS2_MOD, PP1_MOD, PS3_SUP, PM2_SUP, PP3
|
Number of individuals with the variant: 3
Sex: female
|
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Pathogenic
(Dec 01, 2019)
|
criteria provided, single submitter
Method: clinical testing
|
not provided
Affected status: yes
Allele origin:
germline
|
CeGaT Center for Human Genetics Tuebingen
Accession: SCV000493135.3
First in ClinVar: Jun 08, 2016 Last updated: Dec 24, 2022 |
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Pathogenic
(May 12, 2017)
|
criteria provided, single submitter
Method: clinical testing
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Not Provided
Affected status: unknown
Allele origin:
germline
|
ARUP Laboratories, Molecular Genetics and Genomics, ARUP Laboratories
Accession: SCV000884155.1
First in ClinVar: Jun 08, 2016 Last updated: Jun 08, 2016 |
|
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Pathogenic
(Jul 12, 2019)
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criteria provided, single submitter
Method: clinical testing
|
MELAS syndrome
Affected status: unknown
Allele origin:
germline
|
Wong Mito Lab, Molecular and Human Genetics, Baylor College of Medicine
Accession: SCV000993184.1
First in ClinVar: Sep 22, 2019 Last updated: Sep 22, 2019 |
Comment:
The NC_012920.1:m.8344A>G variant in MT-TK gene is interpreted to be a Pathogenic variant based on the modified ACMG guidelines (unpublished). This variant meets the following … (more)
The NC_012920.1:m.8344A>G variant in MT-TK gene is interpreted to be a Pathogenic variant based on the modified ACMG guidelines (unpublished). This variant meets the following evidence codes reported in the guidelines: PS3, PS5 (less)
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Pathogenic
(Jul 20, 2021)
|
criteria provided, single submitter
Method: clinical testing
|
MT-TK-related mitochondrial disorder
(Mitochondrial inheritance)
Affected status: yes
Allele origin:
maternal
|
Breda Genetics srl
Accession: SCV001977008.1
First in ClinVar: Oct 16, 2021 Last updated: Oct 16, 2021 |
Comment:
The variant m.8344A>G in the MT-TK gene is reported as pathogenic for MERRF and other mitochondrial diseases in MITOMAP database. This variant is reported as … (more)
The variant m.8344A>G in the MT-TK gene is reported as pathogenic for MERRF and other mitochondrial diseases in MITOMAP database. This variant is reported as pathogenic for MERRF syndrome, Leigh syndrome and mitochondrial disorder in ClinVar (Variation ID: 9579). The variant is reported with a frequency of 0.008% in the current dataset of full-length mitochondrial sequences from GenBank. The variant m.8344A>G is the most common variant identified in patients with MERRF (myoclonic epilepsy with ragged red fibers), accounting for about 80% of cases (Velez-Bartolomei et al., 2021, PMID: 20301693). However, this variant has also been reported in patients with other forms of mitochondrial diseases, such as Leigh syndrome (Tsao et al., 2003, PMID: 12661941), cavitating leukoencephalopathy (Biancheri et al., 2010, PMID: 20581069) and Parkinson disease (OMIM * 590060). The variant has also been reported as pathogenic by Wong and colleagues in the recent article on mitochondrial tRNA variant interpretation (PMID: 31965079). (less)
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Pathogenic
(May 04, 2022)
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criteria provided, single submitter
Method: clinical testing
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MELAS syndrome
Affected status: unknown
Allele origin:
germline
|
Mendelics
Accession: SCV002517700.1
First in ClinVar: May 28, 2022 Last updated: May 28, 2022 |
|
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Pathogenic
(Apr 16, 2024)
|
criteria provided, single submitter
Method: clinical testing
|
MERRF syndrome
(Mitochondrial inheritance)
Affected status: yes
Allele origin:
unknown
|
Institute of Human Genetics, University of Leipzig Medical Center
Accession: SCV002505590.2
First in ClinVar: Apr 30, 2022 Last updated: Oct 13, 2024 |
Comment:
Criteria applied: PS4_VSTR,PP1_MOD,PS3_SUP,PP3
Clinical Features:
Bilateral tonic-clonic seizure (present) , Sensory neuropathy (present) , Myoclonic seizure (present) , Myoclonus (present) , Cerebellar ataxia (present)
Sex: male
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Pathogenic
(Oct 01, 2010)
|
no assertion criteria provided
Method: literature only
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MERRF SYNDROME
Affected status: not provided
Allele origin:
germline
|
OMIM
Accession: SCV000030415.6
First in ClinVar: Apr 04, 2013 Last updated: Oct 23, 2017 |
Comment on evidence:
In patients with the MERRF syndrome (545000), Shoffner et al. (1990) and Yoneda et al. (1990) identified an A-to-G transition at nucleotide 8344 that altered … (more)
In patients with the MERRF syndrome (545000), Shoffner et al. (1990) and Yoneda et al. (1990) identified an A-to-G transition at nucleotide 8344 that altered a conserved nucleotide in the tRNA(lys) gene (MTTK) and was heteroplasmic. The mutation was found in 3 independent pedigrees with the disease, while 75 controls did not have the mutation. Treatment with CoQ at 300 mg/day resulted in marked improvement of the phenotype. The same mutation was reported by Berkovic et al. (1991), Seibel et al. (1991), Shih et al. (1991), Tanno et al. (1991), and Zeviani et al. (1991). In all 3 patients with the MERRF syndrome, Noer et al. (1991) found the A-to-G substitution of nucleotide 8344 in the tRNA-lys gene. There was evidence that the mutations had arisen independently in these patients. Boulet et al. (1992) studied the distribution and expression of mutant mtDNAs carrying the A-to-G mutation at position 8344 in the skeletal muscle of 4 patients with myoclonus epilepsy and ragged-red fibers. The proportion of mutant genomes was greater than 80% of total mtDNAs in muscle samples of all patients and was associated with a decrease in the activity of cytochrome c oxidase. The great majority of myoblasts, cloned from the satellite-cell population in the same muscles, were homoplasmic for the mutation. Translation of all mtDNA-encoded genes was severely depressed in homoplasmic mutant myoblast clones but not in heteroplasmic or wildtype clones. Approximately 15% wildtype mtDNAs restored translation and COX activity to near-normal levels. The results showed that the A-to-G substitution is functionally a recessive mutation that can be rescued by intraorganellar complementation. Proteins of the complex I and VI subunits were more affected than complex V subunits, and there was a rough correlation with both protein size and number of lysine residues. Among 9 affected members of a MERRF family, Suomalainen et al. (1993) showed that the mutated nucleotide 8344 comprised from 9 to 72% of the total mtDNA in the leukocytes. They made use of a solid-phase minisequencing technique which, in addition to identifying the A8344G mutation permitted simultaneous determination in the same assay from one blood sample of the relative amount of mutated mtDNA. Lertrit et al. (1992) studied 6 tissues from a patient with MERRF caused by the 8344 mutation. Heteroplasmy was observed in all: cerebellum, cerebrum, pancreas, liver, muscle, and heart. Thus, the mutated population of mitochondria must have existed before the formation of the 3 primary embryonic layers. The patient had no family history of a CNS disorder. Lertrit et al. (1992) found a lack of correlation between the degree of mtDNA heteroplasmy and clinical symptoms related to a particular organ and suggested that this indicated the presence of tissue-specific nuclear factors that modify the phenotypic expression of the 8344 mutation. Perhaps rather than a specific nuclear factor there are merely tissue differences in the requirements for the particular element of the respiratory chain involved. Shoffner and Wallace (1992) estimated that the MTTK*MERRF8334 mutation accounts for 80 to 90% of MERRF cases. Penisson-Besnier et al. (1992) described a family with MERRF and the point mutation at 8344. The mutation was found in all the maternal lineage with a relatively narrow range of variation in the percentage of mutant mitochondrial genomes with one exception represented by a set of dizygotic twins; one was clinically affected and showed a high proportion of mutant mitochondrial DNAs in blood cells, while the other was asymptomatic and showed very small amounts of mutant mtDNA in blood and skin. This suggests that the mitochondria are segregated at an early stage in oogenesis. In a study of 150 patients, most of them with diagnosed or suspected mitochondrial disease, Silvestri et al. (1993) found a high correlation between the A-to-G transition at position 8344 and the MERRF syndrome, but they also showed that this mutation can be associated with other phenotypes, including Leigh syndrome (256000), myoclonus or myopathy with truncal lipomas, and proximal myopathy. Furthermore, the absence of the 8344 mutation in 4 typical MERRF patients suggested that other mutations in the MTTK gene or elsewhere in the mitochondrial genome can produce the same phenotype. Hammans et al. (1993) studied 7 patients with the A8344-to-G mutation and their relatives. In 1 family, the mutation was deduced to be present in 4 generations. The index cases showed the core clinical features of MERRF, namely, myoclonus, ataxia, and seizures. Among other features, progressive external ophthalmoplegia, Leigh syndrome, and stroke-like episodes were observed, well recognized features in mitochondrial myopathies but novel manifestations of this genotype. Analyses for the proportion of mutant mtDNA, using an oligonucleotide hybridization technique, indicated that the proportion of mutant mtDNA in blood was significantly greater in symptomatic than in asymptomatic cases. Furthermore, the proportion of mutant mtDNA in blood correlated with age of onset of disease and clinical severity assessed by a simple scale. In a Chinese family living in Taiwan, Fang et al. (1994) described MERRF caused by the A8344-to-G mutation in 6 persons, including the grandmother, 2 sibs, and 3 grandchildren. Action myoclonus was seen in 5; short stature, muscle weakness, and mental retardation in 4; lactic acidosis, hearing impairment, and ataxia in 2; and seizures in 1. Muscle biopsy from 2 affected sibs showed ragged-red fibers and abundant subsarcolemmal mitochondria with paracrystalline inclusions. Enriquez et al. (1995) studied the pathogenic mechanism of the A8344G mutation by comparing mtDNA-less cells which were transformed with either the mutant MTTK gene or the wildtype MTTK. A decrease of 50-60% in the specific tRNA-lys aminoacylation capacity per cell was found in mutant cells. Furthermore, several lines of evidence revealed that the severe protein synthesis impairment in MERRF mutation-carrying cells was due to premature termination of translation at each or near each lysine codon, with the deficiency of aminoacylated tRNA-lys being the most likely cause of this phenomenon. Borner et al. (2000) generated conflicting results, using an assay that combines tRNA oxidation and circularization. The authors determined the relative amounts and states of aminoacylation of mutant and wildtype tRNAs in tissue samples from patients with MELAS syndrome (540000) and MERRF syndrome. In most biopsies from MELAS patients carrying the 3243A-G substitution in the mitochondrial tRNALeu(UUR) gene (590050), the mutant tRNA was underrepresented among processed and/or aminoacylated tRNAs. In contrast, in biopsies from MERRF patients harboring the 8344A-G substitution, neither the relative abundance nor the aminoacylation of the mutated tRNA was affected. The authors concluded that whereas the 3243A-G mutation may contribute to the pathogenesis of MELAS by reducing the amount of aminoacylated tRNALeu, the 8344A-G mutation does not affect tRNALys function in MERRF patients in the same way. A specific mutation in mitochondrial DNA was first demonstrated by Shoffner et al. (1990); this was a missense mutation in the MTTK gene. The A-to-G mutation at nucleotide 8344 accounted for 80 to 90% of MERRF cases (Shoffner and Wallace, 1992). Biochemically, the mutation produced multiple deficiencies in the enzyme complexes of the respiratory chain, consistent with a defect in translation of all mtDNA-encoded genes. Chomyn et al. (1991) showed that transfer of mtDNAs carrying the mutation to human cell lines lacking their own mitochondrial DNA resulted in a severe defect in mitochondrial translation in the recipient cells, independent of nuclear background, implying that the tRNA mutation itself is sufficient to cause the disease. See 545000 for a discussion of the MERRF syndrome (myoclonus epilepsy associated with ragged-red fibers). In a study of 67 Australian cases labeled Leigh syndrome from 56 pedigrees, 35 with a firm diagnosis and 32 with some atypical features, Rahman et al. (1996) identified 11 patients with mitochondrial DNA point mutations. Two mutations were in the MTATP6 gene (8993T-G, 516060.0001; 8993T-C, 516060.0002), and one was the common MERRF mutation in the MTTK gene (8344A-G). Chomyn (1998) reviewed the new insights into human mitochondrial function and genetics by study of the 8344A-G mutation in the gene encoding mitochondrial lysyl-tRNA. Holme et al. (1993) reported a woman with multiple symmetric lipomas (MSL; see 151800) in the neck and shoulder area associated with a heteroplasmic c.8344A-G mutation in the MTTK gene (590060.0001). Her son, who also carried the mutation, had MERRF syndrome; the mother had no signs of MERRF syndrome. The fraction of mutant mtDNA in the woman varied between 62% and 80% in cultured skin fibroblasts, lymphocytes, normal adipose tissue, and muscle, whereas the fraction of mutant mtDNA in the lipomas ranged from 90 to 94%. Ultrastructural examination of the lipomas revealed numerous mitochondria and electron-dense inclusions in some adipocytes. Holme et al. (1993) concluded that the mutation may either directly or indirectly perturb the maturation process of the adipocytes, increasing the risk of lipoma formation. Gamez et al. (1998) identified a heteroplasmic c.8344A-G mutation in the MTTK gene in 6 members of a family with MSL. The 36-year-old female proband had a history of progressive muscle weakness associated with peripheral polyneuropathy, neurosensory hypoacusis, and symmetric confluent large lipomas over the neck and upper trunk. She developed dysarthria, dysphagia, and ptosis, suggestive of a stroke, and subsequently had lactic acidosis with multiorgan failure. Muscle biopsy of the proband showed both ragged-red and COX-negative fibers. The proportion of mutated mtDNA was higher in lipomas than in muscle and blood. Five maternal relatives had multiple symmetric lipomatosis but no neuromuscular involvement; only the proband's affected mother had hearing loss. Horvath et al. (2007) reported a 66-year-old German man with the 8344A-G mutation who presented with an 8-year history of parkinsonism (556500). Symptoms included bradykinesia, resting tremor, and asymmetric rigidity. He also had proximal muscle weakness, hyporeflexia, decreased distal sensation, and bilateral hearing loss. Serum creatine kinase was elevated. He showed good response to levodopa. Skeletal muscle biopsy showed ragged-red fibers, fiber size variability, centrally placed nuclei, and atrophic and necrotic fibers. There was a mild decrease in some respiratory chain enzymes. The 8344A-G mutation was homoplasmic in muscle and 80% in leukocytes. A brother with progressive hearing loss since age 10 had 70% heteroplasmy in blood. Biancheri et al. (2010) identified the 8344A-G mutation in a child with severe cavitating leukoencephalopathy. The infant had congenital cataracts, but developed normally until age 17 months when he showed psychomotor and neurologic regression. Symptoms included nystagmus, irritability, hypertonia, extensor plantar responses, and swallowing and feeding difficulties. Brain MRS showed increased lactate; muscle biopsy showed ragged-red fibers and decreased activity of mitochondrial complexes I+III and II+III (about 30% residual activity). Patient tissues showed high levels of mutant mtDNA that was not detected in the mother's tissues. Biancheri et al. (2010) noted the unusual early presentation in this patient and emphasized the characteristic cystic degenerative pattern of the brain imaging which is suggestive of a mitochondrial disorder. Using mutant and control cybrids, Yen et al. (2016) found that the 8344A-G mutation in MTTK suppressed maturation of COQ5 (616359) and disrupted a COQ5-containing mitochondrial protein complex, concomitant with reduction in mitochondrial membrane potential, oxygen consumption, and ATP production. (less)
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Pathogenic
(Mar 09, 2023)
|
no assertion criteria provided
Method: clinical testing
|
MT-TK Related Disorder
Affected status: yes
Allele origin:
maternal
|
Undiagnosed Diseases Network, NIH
Study: Undiagnosed Diseases Network (NIH), UDN
Accession: SCV004242200.1 First in ClinVar: Feb 04, 2024 Last updated: Feb 04, 2024 |
Number of individuals with the variant: 2
Clinical Features:
Cerebellar ataxia (present) , Dysarthria (present) , Frequent falls (present) , Progressive muscle weakness (present) , Gowers sign (present) , Paresthesia (present) , Difficulty climbing … (more)
Cerebellar ataxia (present) , Dysarthria (present) , Frequent falls (present) , Progressive muscle weakness (present) , Gowers sign (present) , Paresthesia (present) , Difficulty climbing stairs (present) , Peripheral neuropathy (present) (less)
Zygosity: Single Heterozygote
Age: 50-59 years
Sex: male
Tissue: Extracted DNA
|
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Pathogenic
(Oct 01, 2010)
|
no assertion criteria provided
Method: literature only
|
PARKINSON DISEASE, MITOCHONDRIAL
Affected status: not provided
Allele origin:
germline
|
OMIM
Accession: SCV000030417.7
First in ClinVar: Apr 04, 2013 Last updated: May 19, 2024 |
Comment on evidence:
In patients with the MERRF syndrome (545000), Shoffner et al. (1990) and Yoneda et al. (1990) identified an A-to-G transition at nucleotide 8344 that altered … (more)
In patients with the MERRF syndrome (545000), Shoffner et al. (1990) and Yoneda et al. (1990) identified an A-to-G transition at nucleotide 8344 that altered a conserved nucleotide in the tRNA(lys) gene (MTTK) and was heteroplasmic. The mutation was found in 3 independent pedigrees with the disease, while 75 controls did not have the mutation. Treatment with CoQ at 300 mg/day resulted in marked improvement of the phenotype. The same mutation was reported by Berkovic et al. (1991), Seibel et al. (1991), Shih et al. (1991), Tanno et al. (1991), and Zeviani et al. (1991). In all 3 patients with the MERRF syndrome, Noer et al. (1991) found the A-to-G substitution of nucleotide 8344 in the tRNA-lys gene. There was evidence that the mutations had arisen independently in these patients. Boulet et al. (1992) studied the distribution and expression of mutant mtDNAs carrying the A-to-G mutation at position 8344 in the skeletal muscle of 4 patients with myoclonus epilepsy and ragged-red fibers. The proportion of mutant genomes was greater than 80% of total mtDNAs in muscle samples of all patients and was associated with a decrease in the activity of cytochrome c oxidase. The great majority of myoblasts, cloned from the satellite-cell population in the same muscles, were homoplasmic for the mutation. Translation of all mtDNA-encoded genes was severely depressed in homoplasmic mutant myoblast clones but not in heteroplasmic or wildtype clones. Approximately 15% wildtype mtDNAs restored translation and COX activity to near-normal levels. The results showed that the A-to-G substitution is functionally a recessive mutation that can be rescued by intraorganellar complementation. Proteins of the complex I and VI subunits were more affected than complex V subunits, and there was a rough correlation with both protein size and number of lysine residues. Among 9 affected members of a MERRF family, Suomalainen et al. (1993) showed that the mutated nucleotide 8344 comprised from 9 to 72% of the total mtDNA in the leukocytes. They made use of a solid-phase minisequencing technique which, in addition to identifying the A8344G mutation permitted simultaneous determination in the same assay from one blood sample of the relative amount of mutated mtDNA. Lertrit et al. (1992) studied 6 tissues from a patient with MERRF caused by the 8344 mutation. Heteroplasmy was observed in all: cerebellum, cerebrum, pancreas, liver, muscle, and heart. Thus, the mutated population of mitochondria must have existed before the formation of the 3 primary embryonic layers. The patient had no family history of a CNS disorder. Lertrit et al. (1992) found a lack of correlation between the degree of mtDNA heteroplasmy and clinical symptoms related to a particular organ and suggested that this indicated the presence of tissue-specific nuclear factors that modify the phenotypic expression of the 8344 mutation. Perhaps rather than a specific nuclear factor there are merely tissue differences in the requirements for the particular element of the respiratory chain involved. Shoffner and Wallace (1992) estimated that the MTTK*MERRF8334 mutation accounts for 80 to 90% of MERRF cases. Penisson-Besnier et al. (1992) described a family with MERRF and the point mutation at 8344. The mutation was found in all the maternal lineage with a relatively narrow range of variation in the percentage of mutant mitochondrial genomes with one exception represented by a set of dizygotic twins; one was clinically affected and showed a high proportion of mutant mitochondrial DNAs in blood cells, while the other was asymptomatic and showed very small amounts of mutant mtDNA in blood and skin. This suggests that the mitochondria are segregated at an early stage in oogenesis. In a study of 150 patients, most of them with diagnosed or suspected mitochondrial disease, Silvestri et al. (1993) found a high correlation between the A-to-G transition at position 8344 and the MERRF syndrome, but they also showed that this mutation can be associated with other phenotypes, including Leigh syndrome (500017), myoclonus or myopathy with truncal lipomas, and proximal myopathy. Furthermore, the absence of the 8344 mutation in 4 typical MERRF patients suggested that other mutations in the MTTK gene or elsewhere in the mitochondrial genome can produce the same phenotype. Hammans et al. (1993) studied 7 patients with the A8344-to-G mutation and their relatives. In 1 family, the mutation was deduced to be present in 4 generations. The index cases showed the core clinical features of MERRF, namely, myoclonus, ataxia, and seizures. Among other features, progressive external ophthalmoplegia, Leigh syndrome, and stroke-like episodes were observed, well recognized features in mitochondrial myopathies but novel manifestations of this genotype. Analyses for the proportion of mutant mtDNA, using an oligonucleotide hybridization technique, indicated that the proportion of mutant mtDNA in blood was significantly greater in symptomatic than in asymptomatic cases. Furthermore, the proportion of mutant mtDNA in blood correlated with age of onset of disease and clinical severity assessed by a simple scale. In a Chinese family living in Taiwan, Fang et al. (1994) described MERRF caused by the A8344-to-G mutation in 6 persons, including the grandmother, 2 sibs, and 3 grandchildren. Action myoclonus was seen in 5; short stature, muscle weakness, and mental retardation in 4; lactic acidosis, hearing impairment, and ataxia in 2; and seizures in 1. Muscle biopsy from 2 affected sibs showed ragged-red fibers and abundant subsarcolemmal mitochondria with paracrystalline inclusions. Enriquez et al. (1995) studied the pathogenic mechanism of the A8344G mutation by comparing mtDNA-less cells which were transformed with either the mutant MTTK gene or the wildtype MTTK. A decrease of 50-60% in the specific tRNA-lys aminoacylation capacity per cell was found in mutant cells. Furthermore, several lines of evidence revealed that the severe protein synthesis impairment in MERRF mutation-carrying cells was due to premature termination of translation at each or near each lysine codon, with the deficiency of aminoacylated tRNA-lys being the most likely cause of this phenomenon. Borner et al. (2000) generated conflicting results, using an assay that combines tRNA oxidation and circularization. The authors determined the relative amounts and states of aminoacylation of mutant and wildtype tRNAs in tissue samples from patients with MELAS syndrome (540000) and MERRF syndrome. In most biopsies from MELAS patients carrying the 3243A-G substitution in the mitochondrial tRNALeu(UUR) gene (590050), the mutant tRNA was underrepresented among processed and/or aminoacylated tRNAs. In contrast, in biopsies from MERRF patients harboring the 8344A-G substitution, neither the relative abundance nor the aminoacylation of the mutated tRNA was affected. The authors concluded that whereas the 3243A-G mutation may contribute to the pathogenesis of MELAS by reducing the amount of aminoacylated tRNALeu, the 8344A-G mutation does not affect tRNALys function in MERRF patients in the same way. A specific mutation in mitochondrial DNA was first demonstrated by Shoffner et al. (1990); this was a missense mutation in the MTTK gene. The A-to-G mutation at nucleotide 8344 accounted for 80 to 90% of MERRF cases (Shoffner and Wallace, 1992). Biochemically, the mutation produced multiple deficiencies in the enzyme complexes of the respiratory chain, consistent with a defect in translation of all mtDNA-encoded genes. Chomyn et al. (1991) showed that transfer of mtDNAs carrying the mutation to human cell lines lacking their own mitochondrial DNA resulted in a severe defect in mitochondrial translation in the recipient cells, independent of nuclear background, implying that the tRNA mutation itself is sufficient to cause the disease. See 545000 for a discussion of the MERRF syndrome (myoclonus epilepsy associated with ragged-red fibers). In a study of 67 Australian cases labeled Leigh syndrome from 56 pedigrees, 35 with a firm diagnosis and 32 with some atypical features, Rahman et al. (1996) identified 11 patients with mitochondrial DNA point mutations. Two mutations were in the MTATP6 gene (8993T-G, 516060.0001; 8993T-C, 516060.0002), and one was the common MERRF mutation in the MTTK gene (8344A-G). Chomyn (1998) reviewed the new insights into human mitochondrial function and genetics by study of the 8344A-G mutation in the gene encoding mitochondrial lysyl-tRNA. Holme et al. (1993) reported a woman with multiple symmetric lipomas (MSL; see 151800) in the neck and shoulder area associated with a heteroplasmic c.8344A-G mutation in the MTTK gene (590060.0001). Her son, who also carried the mutation, had MERRF syndrome; the mother had no signs of MERRF syndrome. The fraction of mutant mtDNA in the woman varied between 62% and 80% in cultured skin fibroblasts, lymphocytes, normal adipose tissue, and muscle, whereas the fraction of mutant mtDNA in the lipomas ranged from 90 to 94%. Ultrastructural examination of the lipomas revealed numerous mitochondria and electron-dense inclusions in some adipocytes. Holme et al. (1993) concluded that the mutation may either directly or indirectly perturb the maturation process of the adipocytes, increasing the risk of lipoma formation. Gamez et al. (1998) identified a heteroplasmic c.8344A-G mutation in the MTTK gene in 6 members of a family with MSL. The 36-year-old female proband had a history of progressive muscle weakness associated with peripheral polyneuropathy, neurosensory hypoacusis, and symmetric confluent large lipomas over the neck and upper trunk. She developed dysarthria, dysphagia, and ptosis, suggestive of a stroke, and subsequently had lactic acidosis with multiorgan failure. Muscle biopsy of the proband showed both ragged-red and COX-negative fibers. The proportion of mutated mtDNA was higher in lipomas than in muscle and blood. Five maternal relatives had multiple symmetric lipomatosis but no neuromuscular involvement; only the proband's affected mother had hearing loss. Horvath et al. (2007) reported a 66-year-old German man with the 8344A-G mutation who presented with an 8-year history of parkinsonism (556500). Symptoms included bradykinesia, resting tremor, and asymmetric rigidity. He also had proximal muscle weakness, hyporeflexia, decreased distal sensation, and bilateral hearing loss. Serum creatine kinase was elevated. He showed good response to levodopa. Skeletal muscle biopsy showed ragged-red fibers, fiber size variability, centrally placed nuclei, and atrophic and necrotic fibers. There was a mild decrease in some respiratory chain enzymes. The 8344A-G mutation was homoplasmic in muscle and 80% in leukocytes. A brother with progressive hearing loss since age 10 had 70% heteroplasmy in blood. Biancheri et al. (2010) identified the 8344A-G mutation in a child with severe cavitating leukoencephalopathy. The infant had congenital cataracts, but developed normally until age 17 months when he showed psychomotor and neurologic regression. Symptoms included nystagmus, irritability, hypertonia, extensor plantar responses, and swallowing and feeding difficulties. Brain MRS showed increased lactate; muscle biopsy showed ragged-red fibers and decreased activity of mitochondrial complexes I+III and II+III (about 30% residual activity). Patient tissues showed high levels of mutant mtDNA that was not detected in the mother's tissues. Biancheri et al. (2010) noted the unusual early presentation in this patient and emphasized the characteristic cystic degenerative pattern of the brain imaging which is suggestive of a mitochondrial disorder. Using mutant and control cybrids, Yen et al. (2016) found that the 8344A-G mutation in MTTK suppressed maturation of COQ5 (616359) and disrupted a COQ5-containing mitochondrial protein complex, concomitant with reduction in mitochondrial membrane potential, oxygen consumption, and ATP production. (less)
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Pathogenic
(Oct 01, 2010)
|
no assertion criteria provided
Method: literature only
|
LEIGH SYNDROME
Affected status: not provided
Allele origin:
germline
|
OMIM
Accession: SCV000030416.7
First in ClinVar: Apr 04, 2013 Last updated: May 19, 2024 |
Comment on evidence:
In patients with the MERRF syndrome (545000), Shoffner et al. (1990) and Yoneda et al. (1990) identified an A-to-G transition at nucleotide 8344 that altered … (more)
In patients with the MERRF syndrome (545000), Shoffner et al. (1990) and Yoneda et al. (1990) identified an A-to-G transition at nucleotide 8344 that altered a conserved nucleotide in the tRNA(lys) gene (MTTK) and was heteroplasmic. The mutation was found in 3 independent pedigrees with the disease, while 75 controls did not have the mutation. Treatment with CoQ at 300 mg/day resulted in marked improvement of the phenotype. The same mutation was reported by Berkovic et al. (1991), Seibel et al. (1991), Shih et al. (1991), Tanno et al. (1991), and Zeviani et al. (1991). In all 3 patients with the MERRF syndrome, Noer et al. (1991) found the A-to-G substitution of nucleotide 8344 in the tRNA-lys gene. There was evidence that the mutations had arisen independently in these patients. Boulet et al. (1992) studied the distribution and expression of mutant mtDNAs carrying the A-to-G mutation at position 8344 in the skeletal muscle of 4 patients with myoclonus epilepsy and ragged-red fibers. The proportion of mutant genomes was greater than 80% of total mtDNAs in muscle samples of all patients and was associated with a decrease in the activity of cytochrome c oxidase. The great majority of myoblasts, cloned from the satellite-cell population in the same muscles, were homoplasmic for the mutation. Translation of all mtDNA-encoded genes was severely depressed in homoplasmic mutant myoblast clones but not in heteroplasmic or wildtype clones. Approximately 15% wildtype mtDNAs restored translation and COX activity to near-normal levels. The results showed that the A-to-G substitution is functionally a recessive mutation that can be rescued by intraorganellar complementation. Proteins of the complex I and VI subunits were more affected than complex V subunits, and there was a rough correlation with both protein size and number of lysine residues. Among 9 affected members of a MERRF family, Suomalainen et al. (1993) showed that the mutated nucleotide 8344 comprised from 9 to 72% of the total mtDNA in the leukocytes. They made use of a solid-phase minisequencing technique which, in addition to identifying the A8344G mutation permitted simultaneous determination in the same assay from one blood sample of the relative amount of mutated mtDNA. Lertrit et al. (1992) studied 6 tissues from a patient with MERRF caused by the 8344 mutation. Heteroplasmy was observed in all: cerebellum, cerebrum, pancreas, liver, muscle, and heart. Thus, the mutated population of mitochondria must have existed before the formation of the 3 primary embryonic layers. The patient had no family history of a CNS disorder. Lertrit et al. (1992) found a lack of correlation between the degree of mtDNA heteroplasmy and clinical symptoms related to a particular organ and suggested that this indicated the presence of tissue-specific nuclear factors that modify the phenotypic expression of the 8344 mutation. Perhaps rather than a specific nuclear factor there are merely tissue differences in the requirements for the particular element of the respiratory chain involved. Shoffner and Wallace (1992) estimated that the MTTK*MERRF8334 mutation accounts for 80 to 90% of MERRF cases. Penisson-Besnier et al. (1992) described a family with MERRF and the point mutation at 8344. The mutation was found in all the maternal lineage with a relatively narrow range of variation in the percentage of mutant mitochondrial genomes with one exception represented by a set of dizygotic twins; one was clinically affected and showed a high proportion of mutant mitochondrial DNAs in blood cells, while the other was asymptomatic and showed very small amounts of mutant mtDNA in blood and skin. This suggests that the mitochondria are segregated at an early stage in oogenesis. In a study of 150 patients, most of them with diagnosed or suspected mitochondrial disease, Silvestri et al. (1993) found a high correlation between the A-to-G transition at position 8344 and the MERRF syndrome, but they also showed that this mutation can be associated with other phenotypes, including Leigh syndrome (500017), myoclonus or myopathy with truncal lipomas, and proximal myopathy. Furthermore, the absence of the 8344 mutation in 4 typical MERRF patients suggested that other mutations in the MTTK gene or elsewhere in the mitochondrial genome can produce the same phenotype. Hammans et al. (1993) studied 7 patients with the A8344-to-G mutation and their relatives. In 1 family, the mutation was deduced to be present in 4 generations. The index cases showed the core clinical features of MERRF, namely, myoclonus, ataxia, and seizures. Among other features, progressive external ophthalmoplegia, Leigh syndrome, and stroke-like episodes were observed, well recognized features in mitochondrial myopathies but novel manifestations of this genotype. Analyses for the proportion of mutant mtDNA, using an oligonucleotide hybridization technique, indicated that the proportion of mutant mtDNA in blood was significantly greater in symptomatic than in asymptomatic cases. Furthermore, the proportion of mutant mtDNA in blood correlated with age of onset of disease and clinical severity assessed by a simple scale. In a Chinese family living in Taiwan, Fang et al. (1994) described MERRF caused by the A8344-to-G mutation in 6 persons, including the grandmother, 2 sibs, and 3 grandchildren. Action myoclonus was seen in 5; short stature, muscle weakness, and mental retardation in 4; lactic acidosis, hearing impairment, and ataxia in 2; and seizures in 1. Muscle biopsy from 2 affected sibs showed ragged-red fibers and abundant subsarcolemmal mitochondria with paracrystalline inclusions. Enriquez et al. (1995) studied the pathogenic mechanism of the A8344G mutation by comparing mtDNA-less cells which were transformed with either the mutant MTTK gene or the wildtype MTTK. A decrease of 50-60% in the specific tRNA-lys aminoacylation capacity per cell was found in mutant cells. Furthermore, several lines of evidence revealed that the severe protein synthesis impairment in MERRF mutation-carrying cells was due to premature termination of translation at each or near each lysine codon, with the deficiency of aminoacylated tRNA-lys being the most likely cause of this phenomenon. Borner et al. (2000) generated conflicting results, using an assay that combines tRNA oxidation and circularization. The authors determined the relative amounts and states of aminoacylation of mutant and wildtype tRNAs in tissue samples from patients with MELAS syndrome (540000) and MERRF syndrome. In most biopsies from MELAS patients carrying the 3243A-G substitution in the mitochondrial tRNALeu(UUR) gene (590050), the mutant tRNA was underrepresented among processed and/or aminoacylated tRNAs. In contrast, in biopsies from MERRF patients harboring the 8344A-G substitution, neither the relative abundance nor the aminoacylation of the mutated tRNA was affected. The authors concluded that whereas the 3243A-G mutation may contribute to the pathogenesis of MELAS by reducing the amount of aminoacylated tRNALeu, the 8344A-G mutation does not affect tRNALys function in MERRF patients in the same way. A specific mutation in mitochondrial DNA was first demonstrated by Shoffner et al. (1990); this was a missense mutation in the MTTK gene. The A-to-G mutation at nucleotide 8344 accounted for 80 to 90% of MERRF cases (Shoffner and Wallace, 1992). Biochemically, the mutation produced multiple deficiencies in the enzyme complexes of the respiratory chain, consistent with a defect in translation of all mtDNA-encoded genes. Chomyn et al. (1991) showed that transfer of mtDNAs carrying the mutation to human cell lines lacking their own mitochondrial DNA resulted in a severe defect in mitochondrial translation in the recipient cells, independent of nuclear background, implying that the tRNA mutation itself is sufficient to cause the disease. See 545000 for a discussion of the MERRF syndrome (myoclonus epilepsy associated with ragged-red fibers). In a study of 67 Australian cases labeled Leigh syndrome from 56 pedigrees, 35 with a firm diagnosis and 32 with some atypical features, Rahman et al. (1996) identified 11 patients with mitochondrial DNA point mutations. Two mutations were in the MTATP6 gene (8993T-G, 516060.0001; 8993T-C, 516060.0002), and one was the common MERRF mutation in the MTTK gene (8344A-G). Chomyn (1998) reviewed the new insights into human mitochondrial function and genetics by study of the 8344A-G mutation in the gene encoding mitochondrial lysyl-tRNA. Holme et al. (1993) reported a woman with multiple symmetric lipomas (MSL; see 151800) in the neck and shoulder area associated with a heteroplasmic c.8344A-G mutation in the MTTK gene (590060.0001). Her son, who also carried the mutation, had MERRF syndrome; the mother had no signs of MERRF syndrome. The fraction of mutant mtDNA in the woman varied between 62% and 80% in cultured skin fibroblasts, lymphocytes, normal adipose tissue, and muscle, whereas the fraction of mutant mtDNA in the lipomas ranged from 90 to 94%. Ultrastructural examination of the lipomas revealed numerous mitochondria and electron-dense inclusions in some adipocytes. Holme et al. (1993) concluded that the mutation may either directly or indirectly perturb the maturation process of the adipocytes, increasing the risk of lipoma formation. Gamez et al. (1998) identified a heteroplasmic c.8344A-G mutation in the MTTK gene in 6 members of a family with MSL. The 36-year-old female proband had a history of progressive muscle weakness associated with peripheral polyneuropathy, neurosensory hypoacusis, and symmetric confluent large lipomas over the neck and upper trunk. She developed dysarthria, dysphagia, and ptosis, suggestive of a stroke, and subsequently had lactic acidosis with multiorgan failure. Muscle biopsy of the proband showed both ragged-red and COX-negative fibers. The proportion of mutated mtDNA was higher in lipomas than in muscle and blood. Five maternal relatives had multiple symmetric lipomatosis but no neuromuscular involvement; only the proband's affected mother had hearing loss. Horvath et al. (2007) reported a 66-year-old German man with the 8344A-G mutation who presented with an 8-year history of parkinsonism (556500). Symptoms included bradykinesia, resting tremor, and asymmetric rigidity. He also had proximal muscle weakness, hyporeflexia, decreased distal sensation, and bilateral hearing loss. Serum creatine kinase was elevated. He showed good response to levodopa. Skeletal muscle biopsy showed ragged-red fibers, fiber size variability, centrally placed nuclei, and atrophic and necrotic fibers. There was a mild decrease in some respiratory chain enzymes. The 8344A-G mutation was homoplasmic in muscle and 80% in leukocytes. A brother with progressive hearing loss since age 10 had 70% heteroplasmy in blood. Biancheri et al. (2010) identified the 8344A-G mutation in a child with severe cavitating leukoencephalopathy. The infant had congenital cataracts, but developed normally until age 17 months when he showed psychomotor and neurologic regression. Symptoms included nystagmus, irritability, hypertonia, extensor plantar responses, and swallowing and feeding difficulties. Brain MRS showed increased lactate; muscle biopsy showed ragged-red fibers and decreased activity of mitochondrial complexes I+III and II+III (about 30% residual activity). Patient tissues showed high levels of mutant mtDNA that was not detected in the mother's tissues. Biancheri et al. (2010) noted the unusual early presentation in this patient and emphasized the characteristic cystic degenerative pattern of the brain imaging which is suggestive of a mitochondrial disorder. Using mutant and control cybrids, Yen et al. (2016) found that the 8344A-G mutation in MTTK suppressed maturation of COQ5 (616359) and disrupted a COQ5-containing mitochondrial protein complex, concomitant with reduction in mitochondrial membrane potential, oxygen consumption, and ATP production. (less)
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Likely pathogenic
(Jun 01, 2022)
|
no assertion criteria provided
Method: provider interpretation
|
Complex hereditary spastic paraplegia
Affected status: yes
Allele origin:
maternal
|
Solve-RD Consortium
Accession: SCV005199977.1
First in ClinVar: Oct 26, 2024 Last updated: Oct 26, 2024
Comment:
Variant identified during reanalysis of unsolved cases by the Solve-RD project. The Solve-RD project has received funding from the European Union’s Horizon 2020 research and … (more)
Variant identified during reanalysis of unsolved cases by the Solve-RD project. The Solve-RD project has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No 779257. (less)
|
Comment:
Variant confirmed as disease-causing by referring clinical team
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Pathogenic
(May 22, 2017)
|
no assertion criteria provided
Method: clinical testing
|
Mitochondrial disease
Affected status: yes
Allele origin:
germline
|
Wellcome Centre for Mitochondrial Research, Newcastle University
Accession: SCV000577896.1
First in ClinVar: Jul 17, 2017 Last updated: Jul 17, 2017 |
Number of individuals with the variant: 7
Sex: male
|
|
not provided
(-)
|
no classification provided
Method: literature only
|
MERRF syndrome
Affected status: unknown
Allele origin:
maternal
|
GeneReviews
Accession: SCV000207614.3
First in ClinVar: Oct 05, 2015 Last updated: Oct 01, 2022 |
Comment:
Most common pathogenic variant; identified in more than 80% of persons w/MERRF
|
|
not provided
(-)
|
no classification provided
Method: literature only
|
Leigh syndrome
Affected status: unknown
Allele origin:
germline
|
GeneReviews
Accession: SCV000188890.5
First in ClinVar: Sep 09, 2014 Last updated: Oct 01, 2022 |
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Germline Functional Evidence
There is no functional evidence in ClinVar for this variation. If you have generated functional data for this variation, please consider submitting that data to ClinVar. |
Citations for germline classification of this variant
HelpTitle | Author | Journal | Year | Link |
---|---|---|---|---|
Mitochondrial DNA-Associated Leigh Syndrome Spectrum. | Adam MP | - | 2024 | PMID: 20301352 |
MERRF. | Adam MP | - | 2021 | PMID: 20301693 |
Interpretation of mitochondrial tRNA variants. | Wong LC | Genetics in medicine : official journal of the American College of Medical Genetics | 2020 | PMID: 31965079 |
Disruption of the human COQ5-containing protein complex is associated with diminished coenzyme Q10 levels under two different conditions of mitochondrial energy deficiency. | Yen HC | Biochimica et biophysica acta | 2016 | PMID: 27155576 |
Cavitating leukoencephalopathy in a child carrying the mitochondrial A8344G mutation. | Biancheri R | AJNR. American journal of neuroradiology | 2010 | PMID: 20581069 |
Demyelinating disease of central and peripheral nervous systems associated with a A8344G mutation in tRNALys. | Erol I | Neuromuscular disorders : NMD | 2009 | PMID: 19269823 |
Unusual presentations of patients with the mitochondrial MERRF mutation A8344G. | Wiedemann FR | Clinical neurology and neurosurgery | 2008 | PMID: 18657354 |
Resting muscle pain as the first clinical symptom in children carrying the MTTK A8344G mutation. | van de Glind G | European journal of paediatric neurology : EJPN : official journal of the European Paediatric Neurology Society | 2007 | PMID: 17293137 |
MERRF syndrome without ragged-red fibers: the need for molecular diagnosis. | Mancuso M | Biochemical and biophysical research communications | 2007 | PMID: 17275787 |
Parkinson syndrome, neuropathy, and myopathy caused by the mutation A8344G (MERRF) in tRNALys. | Horvath R | Neurology | 2007 | PMID: 17200493 |
Bilateral putaminal necrosis associated with the mitochondrial DNA A8344G myoclonus epilepsy with ragged red fibers (MERRF) mutation: an infantile case. | Orcesi S | Journal of child neurology | 2006 | PMID: 16551460 |
A case of sporadic infantile histiocytoid cardiomyopathy caused by the A8344G (MERRF) mitochondrial DNA mutation. | Vallance HD | Pediatric cardiology | 2004 | PMID: 15164143 |
Spasmodic dysphonia in a patient with the A to G transition at nucleotide 8344 in mitochondrial DNA. | Peng Y | Movement disorders : official journal of the Movement Disorder Society | 2003 | PMID: 12784281 |
Decreased aminoacylation of mutant tRNAs in MELAS but not in MERRF patients. | Börner GV | Human molecular genetics | 2000 | PMID: 10699170 |
Familial multiple symmetric lipomatosis associated with the A8344G mutation of mitochondrial DNA. | Gámez J | Neurology | 1998 | PMID: 9674814 |
The myoclonic epilepsy and ragged-red fiber mutation provides new insights into human mitochondrial function and genetics. | Chomyn A | American journal of human genetics | 1998 | PMID: 9529371 |
Leigh syndrome: clinical features and biochemical and DNA abnormalities. | Rahman S | Annals of neurology | 1996 | PMID: 8602753 |
MtDNA mutation in MERRF syndrome causes defective aminoacylation of tRNA(Lys) and premature translation termination. | Enriquez JA | Nature genetics | 1995 | PMID: 7647790 |
Myoclonic epilepsy with ragged-red fibers (MERRF) syndrome: report of a Chinese family with mitochondrial DNA point mutation in tRNA(Lys) gene. | Fang W | Muscle & nerve | 1994 | PMID: 8264702 |
Platelet-mediated transformation of mtDNA-less human cells: analysis of phenotypic variability among clones from normal individuals--and complementation behavior of the tRNALys mutation causing myoclonic epilepsy and ragged red fibers. | Chomyn A | American journal of human genetics | 1994 | PMID: 8198140 |
The mitochondrial DNA transfer RNA(Lys)A-->G(8344) mutation and the syndrome of myoclonic epilepsy with ragged red fibres (MERRF). Relationship of clinical phenotype to proportion of mutant mitochondrial DNA. | Hammans SR | Brain : a journal of neurology | 1993 | PMID: 8513395 |
Multiple symmetric lipomas with high levels of mtDNA with the tRNA(Lys) A-->G(8344) mutation as the only manifestation of disease in a carrier of myoclonus epilepsy and ragged-red fibers (MERRF) syndrome. | Holme E | American journal of human genetics | 1993 | PMID: 8447321 |
Clinical features associated with the A-->G transition at nucleotide 8344 of mtDNA ("MERRF mutation"). | Silvestri G | Neurology | 1993 | PMID: 8170567 |
Quantification of mitochondrial DNA carrying the tRNA(8344Lys) point mutation in myoclonus epilepsy and ragged-red-fiber disease. | Suomalainen A | European journal of human genetics : EJHG | 1993 | PMID: 8069655 |
Tissue segregation of a heteroplasmic mtDNA mutation in MERRF (myoclonic epilepsy with ragged red fibers) encephalomyopathy. | Lertrit P | Human genetics | 1992 | PMID: 1487239 |
Mitochondrial genetics: principles and practice. | Shoffner JM | American journal of human genetics | 1992 | PMID: 1463005 |
Distribution and threshold expression of the tRNA(Lys) mutation in skeletal muscle of patients with myoclonic epilepsy and ragged-red fibers (MERRF). | Boulet L | American journal of human genetics | 1992 | PMID: 1334369 |
Uneven distribution of mitochondrial DNA mutation in MERRF dizygotic twins. | Penisson-Besnier I | Journal of the neurological sciences | 1992 | PMID: 1324294 |
Quantitation of mitochondrial DNA carrying tRNALys mutation in MERRF patients. | Tanno Y | Biochemical and biophysical research communications | 1991 | PMID: 1910341 |
A tRNA(Lys) mutation in the mtDNA is the causal genetic lesion underlying myoclonic epilepsy and ragged-red fiber (MERRF) syndrome. | Noer AS | American journal of human genetics | 1991 | PMID: 1910259 |
Mitochondrial DNA mutation in a Chinese family with myoclonic epilepsy and ragged-red fiber disease. | Shih KD | Biochemical and biophysical research communications | 1991 | PMID: 1900002 |
Rapid detection of the A----G(8344) mutation of mtDNA in Italian families with myoclonus epilepsy and ragged-red fibers (MERRF). | Zeviani M | American journal of human genetics | 1991 | PMID: 1899320 |
Clinical spectrum of mitochondrial DNA mutation at base pair 8344. | Berkovic SF | Lancet (London, England) | 1991 | PMID: 1678125 |
Genetic biochemical and pathophysiological characterization of a familial mitochondrial encephalomyopathy (MERRF). | Seibel P | Journal of the neurological sciences | 1991 | PMID: 1661776 |
A common mitochondrial DNA mutation in the t-RNA(Lys) of patients with myoclonus epilepsy associated with ragged-red fibers. | Yoneda M | Biochemistry international | 1990 | PMID: 2124116 |
Myoclonic epilepsy and ragged-red fiber disease (MERRF) is associated with a mitochondrial DNA tRNA(Lys) mutation. | Shoffner JM | Cell | 1990 | PMID: 2112427 |
https://erepo.clinicalgenome.org/evrepo/ui/interpretation/2e10557d-38a0-4f9a-a63d-426def6d594e | - | - | - | - |
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Text-mined citations for rs118192098 ...
HelpRecord last updated Nov 30, 2024
This date represents the last time this VCV record was updated. The update may be due to an update to one of the included submitted records (SCVs), or due to an update that ClinVar made to the variant such as adding HGVS expressions or a rs number. So this date may be different from the date of the “most recent submission” reported at the top of this page.