Similar studies for GEO DataSets (Select 200235051) - GEO DataSets

Select item 2002350511.

DNA damage repair in barley following double-strand breaks and its dependence on ATR

(Submitter supplied) Maintaining genome integrity presents a particular challenge for plants due to their sedentary lifestyle, which disables direct avoidance of unfavorable external conditions. Additionally, plants’ metabolic processes generate reactive molecules as by-products of e.g. photosynthesis, creating internal DNA-damaging conditions. Due to this, plants have developed a unique and strictly regulated web of DNA damage responses (DDR). more...

Organism:: Hordeum vulgare

Type:: Expression profiling by high throughput sequencing

Platform:: GPL29652
12 Samples

Download data: TXT, XLSX

Series

Accession:: GSE235051

ID:: 200235051

PubMed Full text in PMC Similar studies

Select item 2001166472.

Genome-wide profiling of gamma-ray-responsive transcriptomes from Arabidopsis thaliana ecotype Col-0

(Submitter supplied) To analyze the genes of which their expressions are modulated by gamma irradiation, we performed the whole genome expression microarray profiling by comparing normal whole seedlings of Arabidopsis thaliana as control with those of gamma irradiated as test sample.

Organism:: Arabidopsis thaliana

Type:: Expression profiling by array

Platform:: GPL12621
10 Samples

Download data: TXT

Series

Accession:: GSE116647

ID:: 200116647

Select item 2001813023.

Transcriptome of Arabidopsis thaliana mem1-1 mutant

(Submitter supplied) Transcriptome of Arabidopsis thaliana mem1-1 mutant and Col-0 under normal and 200ppm MMS treatment conditions, respectively

Organism:: Arabidopsis thaliana

Type:: Expression profiling by high throughput sequencing

Platform:: GPL13222
8 Samples

Download data: TXT

Series

Accession:: GSE181302

ID:: 200181302

PubMed Similar studies SRA Run Selector

Select item 2000633554.

Transcriptional response to zebularine and mitomycin C (MMC) in wild type and ATR deficient Arabidopsis thaliana plants

(Submitter supplied) Zebularine is a non-methylable cytidine analog that is used in epigenetic and cancer research. Its application has been shown to activate several transcriptionally silenced genetic elements; however, extent of this activation and other effects on the transcriptome are unknown. Here, we show that zebularine treatment induces preferentially genes associated with DNA damage repair response and this activation is strongly ATR-dependent. more...