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ZNF807P zinc finger protein 807, pseudogene [ Homo sapiens (human) ]

Gene ID: 100129800, updated on 10-Dec-2024

Summary

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Official Symbol
ZNF807Pprovided by HGNC
Official Full Name
zinc finger protein 807, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:33229
See related
AllianceGenome:HGNC:33229
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
ZNF807; ZNF181P1
Expression
Ubiquitous expression in ovary (RPKM 1.2), testis (RPKM 1.1) and 25 other tissues See more
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Genomic context

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See ZNF807P in Genome Data Viewer
Location:
19q13.11
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 19 NC_000019.10 (34541692..34677159, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 19 NC_060943.1 (37086238..37221748, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (35032597..35168064, complement)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr19:34972391-34973046 Neighboring gene H3K27ac hESC enhancer GRCh37_chr19:34973047-34973701 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:34988289-34989176 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:34989177-34990063 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 10505 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:34994324-34995145 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:34996156-34996656 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:34996657-34997157 Neighboring gene WT1 interacting protein Neighboring gene ribosomal protein S26 pseudogene 55 Neighboring gene uncharacterized LOC105372374 Neighboring gene secretoglobin family 1B member 2, pseudogene Neighboring gene secretoglobin family 2B member 2 Neighboring gene zinc finger protein 530-like Neighboring gene secretoglobin family 2B member 3, pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:35154774-35155274 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr19:35167555-35168452 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr19:35168453-35169349 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr19:35170207-35170708 Neighboring gene secretoglobin family 1B member 3, pseudogene Neighboring gene zinc finger protein 302 Neighboring gene secretoglobin family 2B member 1, pseudogene Neighboring gene secretoglobin family 1B member 1, pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A comprehensive catalog of human KRAB-associated zinc finger genes: insights into the evolutionary history of a large family of transcriptional repressors. Huntley S, et al. Genome Res, 2006 May. PMID 16606702, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_146880.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC008747, AC020910

  2. NR_170975.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC008747, AC020910

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p14 Primary Assembly

    Range
    34541692..34677159 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_025791809.1 Reference GRCh38.p14 PATCHES

    Range
    206712..210408 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060943.1 Alternate T2T-CHM13v2.0

    Range
    37086238..37221748 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NG_011972.1: Suppressed sequence

    Description
    NG_011972.1: This RefSeq was temporarily suppressed because there is currently insufficient data to determine whether this gene is a pseudogene or protein coding gene.
Nucleotide Protein
Heading Accession and Version

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