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Zfp951 zinc finger protein 951 [ Rattus norvegicus (Norway rat) ]

Gene ID: 100188984, updated on 27-Dec-2024

Summary

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Symbol
Zfp951provided by RGD
Full Name
zinc finger protein 951provided by RGD
Primary source
RGD:2301011
See related
EnsemblRapid:ENSRNOG00000037421 AllianceGenome:RGD:2301011
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to enable metal ion binding activity. Orthologous to several human genes including ZNF625 (zinc finger protein 625) and ZNF627 (zinc finger protein 627). [provided by Alliance of Genome Resources, Dec 2024]
Expression
Biased expression in Thymus (RPKM 30.8), Spleen (RPKM 30.2) and 9 other tissues See more
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Genomic context

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See Zfp951 in Genome Data Viewer
Location:
14p22
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 14 NC_086032.1 (5332634..5353458, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 14 NC_051349.1 (5032494..5048775, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 14 NC_005113.4 (6280767..6284145, complement)

Chromosome 14 - NC_086032.1Genomic Context describing neighboring genes Neighboring gene large ribosomal subunit protein eL38-like Neighboring gene zinc finger protein 866 like 1 Neighboring gene zinc finger protein 996 like 1 Neighboring gene zinc finger protein 996 like 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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Related articles in PubMed

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC189422

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
zinc finger protein 951
Names
zinc finger protein 120-like
zinc finger protein 431-like
zinc finger protein LOC100188984

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001395603.1 → NP_001382532.1  zinc finger protein 951

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000014
    UniProtKB/TrEMBL
    A0A1W2Q6B6
    Related
    ENSRNOP00000076207.2, ENSRNOT00000093293.3
    Conserved Domains (3) summary
    COG5048
    Location:191 → 407
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:330 → 350
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:12 → 52
    KRAB; KRAB box

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086032.1 Reference GRCr8

    Range
    5332634..5353458 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039091535.2 → XP_038947463.1  zinc finger protein 951 isoform X2

    Conserved Domains (2) summary
    COG5048
    Location:146 → 362
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:285 → 305
    ZF_C2H2; C2H2 Zn finger [structural motif]

  2. XM_017599555.3 → XP_017455044.1  zinc finger protein 951 isoform X1

    UniProtKB/TrEMBL
    A0A0G2QC49, F1LN26

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001134998.1: Suppressed sequence

    Description
    NM_001134998.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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