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Krtap11-1 keratin associated protein 11-1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 100359886, updated on 9-Dec-2024

Summary

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Official Symbol
Krtap11-1provided by RGD
Official Full Name
keratin associated protein 11-1provided by RGD
Primary source
RGD:2323257
See related
EnsemblRapid:ENSRNOG00000027478 AllianceGenome:RGD:2323257
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to enable structural molecule activity. Predicted to be located in cytosol and keratin filament. Orthologous to human KRTAP11-1 (keratin associated protein 11-1). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
human mouse all
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Genomic context

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See Krtap11-1 in Genome Data Viewer
Location:
11q11
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 11 NC_086029.1 (42296147..42297151, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 11 NC_051346.1 (28809940..28810944, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 11 NC_005110.4 (29709809..29711328, complement)

Chromosome 11 - NC_086029.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108352304 Neighboring gene keratin associated protein 8-1 Neighboring gene keratin associated protein 7-1 Neighboring gene mortality factor 4 like 1, pseudogene 8 Neighboring gene uncharacterized LOC134481052 Neighboring gene TIAM Rac1 associated GEF 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables structural molecule activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
  
located_in keratin filament IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
keratin associated protein 11-1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001399002.1 → NP_001385931.1  keratin associated protein 11-1

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000011
    UniProtKB/TrEMBL
    D3ZX50
    Related
    ENSRNOP00000037310.2, ENSRNOT00000029345.4
    Conserved Domains (1) summary
    pfam05287
    Location:1 → 165
    PMG; PMG protein

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086029.1 Reference GRCr8

    Range
    42296147..42297151 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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