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PRND prion like protein doppel [ Ochotona princeps (American pika) ]

Gene ID: 101521258, updated on 8-Mar-2024

Summary

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Gene symbol
PRND
Gene description
prion like protein doppel
Gene type
protein coding
RefSeq status
MODEL
Organism
Ochotona princeps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Ochotonidae; Ochotona
Orthologs
human all
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Genomic context

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See PRND in Genome Data Viewer
Location:
chromosome: 22
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_07 current mOchPri1.hap1 (GCF_030435755.1) 22 NC_080853.1 (35570141..35572939, complement)
102 previous assembly OchPri4.0 (GCF_014633375.1) 4A NC_050562.1 (1411477..1412013)

Chromosome 22 - NC_080853.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 23 member 2 Neighboring gene cystatin-9-like Neighboring gene Ras association domain family member 2 Neighboring gene U6 spliceosomal RNA Neighboring gene prion protein (Kanno blood group)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables copper ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular copper ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein homooligomerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prion-like protein doppel
Names
prion protein 2 (dublet)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030435755.1-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOchPri1.hap1

Genomic

  1. NC_080853.1 Reference mOchPri1.hap1

    Range
    35570141..35572939 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004593338.2 → XP_004593395.1  prion-like protein doppel

    Conserved Domains (2) summary
    pfam00377
    Location:63 → 177
    Prion; Prion/Doppel alpha-helical domain
    pfam11466
    Location:1 → 30
    Doppel; Prion-like protein Doppel
Nucleotide Protein
Heading Accession and Version

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