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LOC101971467 pancreatic triacylglycerol lipase-like [ Ictidomys tridecemlineatus (thirteen-lined ground squirrel) ]

Gene ID: 101971467, updated on 18-Sep-2024

Summary

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Gene symbol
LOC101971467
Gene description
pancreatic triacylglycerol lipase-like
Locus tag
H1C71_000306
See related
EnsemblRapid:ENSSTOG00015013762
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictidomys tridecemlineatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys
Also known as
PL; PTL; PL-h; PNLIP
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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See LOC101971467 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
103 current HiC_Itri_2 (GCF_016881025.1) Unplaced Scaffold NW_024407213.1 (19062737..19074904, complement)
102 previous assembly SpeTri2.0 (GCF_000236235.1) Unplaced Scaffold NW_004936486.1 (6486381..6498578)

NW_024407213.1Genomic Context describing neighboring genes Neighboring gene pancreatic triacylglycerol lipase-like Neighboring gene extensin-like Neighboring gene coiled-coil domain containing 172 Neighboring gene uncharacterized LOC120885515

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Pancreatic triacylglycerol lipase in a hibernating mammal. I. Novel genomic organization. Squire TL, et al. Physiol Genomics, 2003 Dec 16. PMID 14583598
  2. Pancreatic triacylglycerol lipase in a hibernating mammal. II. Cold-adapted function and differential expression. Squire TL, et al. Physiol Genomics, 2003 Dec 16. PMID 14583599
  3. Low-temperature carbon utilization is regulated by novel gene activity in the heart of a hibernating mammal. Andrews MT, et al. Proc Natl Acad Sci U S A, 1998 Jul 7. PMID 9653197, Free PMC Article
  4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables triacylglycerol lipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pancreatic triacylglycerol lipase
Names
Pancreatic lipase
heart pancreatic lipase
pancreatic triacylglyceride lipase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ictidomys tridecemlineatus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HiC_Itri_2 Primary Assembly

Genomic

  1. NW_024407213.1 Reference HiC_Itri_2 Primary Assembly

    Range
    19062737..19074904 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005320700.4 → XP_005320757.1  pancreatic triacylglycerol lipase

    UniProtKB/TrEMBL
    K7GT76
    Related
    ENSSTOP00015016839.1, ENSSTOT00015018457.1
    Conserved Domains (2) summary
    cd01759
    Location:418 → 528
    PLAT_PL; PLAT/LH2 domain of pancreatic triglyceride lipase. Lipases hydrolyze phospholipids and triglycerides to generate fatty acids for energy production or for storage and to release inositol phosphates that act as second messengers. The central role of ...
    pfam00151
    Location:80 → 415
    Lipase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O88354.2 GenPept UniProtKB/Swiss-Prot:O88354

Gene LinkOut

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