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LOC102550534 ubiquitin-like protein FUBI-like [ Rattus norvegicus (Norway rat) ]

Gene ID: 102550534, updated on 9-Dec-2024

Summary

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Symbol
LOC102550534provided by RGD
Full Name
ubiquitin-like protein FUBI-likeprovided by RGD
Primary source
RGD:7701116
See related
EnsemblRapid:ENSRNOG00000062071 AllianceGenome:RGD:7701116
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be located in cytosol and ribosome. Predicted to be part of ribonucleoprotein complex. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See LOC102550534 in Genome Data Viewer
Location:
1q35
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (182294810..182295392)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (172860549..172861181)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (188200351..188200883)

Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene ITPRIP like 2 Neighboring gene uncharacterized LOC120099916 Neighboring gene coenzyme Q7, hydroxylase Neighboring gene transmembrane channel-like 7 Neighboring gene uncharacterized LOC120099917 Neighboring gene transmembrane channel-like 5 Neighboring gene glycerophosphodiester phosphodiesterase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
  
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
  
located_in ribosome IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
ubiquitin-like FUBI-ribosomal protein eS30 fusion protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086019.1 Reference GRCr8

    Range
    182294810..182295392
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039101164.2 → XP_038957092.1  ubiquitin-like FUBI-ribosomal protein eS30 fusion protein

    UniProtKB/TrEMBL
    A0A8I6A5S6
    Related
    ENSRNOP00000078351.2, ENSRNOT00000092289.3
    Conserved Domains (2) summary
    cd01793
    Location:1 → 74
    Ubl_FUBI; ubiquitin-like (Ubl) domain found in ubiquitin-like protein FUBI and similar proteins
    pfam04758
    Location:75 → 113
    Ribosomal_S30; Ribosomal protein S30
Nucleotide Protein Strain
Heading Accession and Version

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