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Vom1r40 vomeronasal 1 receptor 40 [ Rattus norvegicus (Norway rat) ]

Gene ID: 102551504, updated on 17-Aug-2024

Summary

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Official Symbol
Vom1r40provided by RGD
Official Full Name
vomeronasal 1 receptor 40provided by RGD
Primary source
RGD:1359184
See related
EnsemblRapid:ENSRNOG00000065958 AllianceGenome:RGD:1359184
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
V1rg1
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Genomic context

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See Vom1r40 in Genome Data Viewer
Location:
1q21
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (80682300..80683214, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (71610108..71611022, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (67917477..67918469)

Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene microtubule affinity regulating kinase 3, pseudogene 1 Neighboring gene vomeronasal 1 receptor pseudogene 48 Neighboring gene vomeronasal 2 receptor, 32 Neighboring gene vomeronasal 1 receptor 41

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene and alternative splicing annotation with AIR. Florea L, et al. Genome Res, 2005 Jan. PMID 15632090, Free PMC Article
  2. Extreme variability among mammalian V1R gene families. Young JM, et al. Genome Res, 2010 Jan. PMID 19952141, Free PMC Article
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
vomeronasal 1 receptor 40; vomeronasal type-1 receptor 4
Names
vomernasal 1 receptor Vom1r40
vomeronasal 1 receptor, G1
vomeronasal V1r-type receptor V1rg1
vomeronasal type-1 receptor 4-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086019.1 Reference GRCr8

    Range
    80682300..80683214 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006228159.2 → XP_006228221.2  vomeronasal type-1 receptor 4

    UniProtKB/TrEMBL
    A0A8I6A0K0
    Related
    ENSRNOP00000050883.5, ENSRNOT00000051024.5
    Conserved Domains (2) summary
    cd14964
    Location:7 → 32
    7tm_GPCRs; TM helix 1 [structural motif]
    cl28897
    Location:6 → 297
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials